Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
2023-03-18 12:10:44 (5692): Detected: vboxwrapper 26206
2023-03-18 12:10:44 (5692): Detected: BOINC client v7.20.2
2023-03-18 12:10:44 (5692): Detected: VirtualBox VboxManage Interface (Version: 6.1.40)
2023-03-18 12:10:45 (5692): Successfully copied 'init_data.xml' to the shared directory.
2023-03-18 12:10:45 (5692): Create VM. (boinc_46ace7aeb1f1794b, slot#1)
2023-03-18 12:10:46 (5692): Setting Memory Size for VM. (2241MB)
2023-03-18 12:10:46 (5692): Setting CPU Count for VM. (5)
2023-03-18 12:10:46 (5692): Setting Chipset Options for VM.
2023-03-18 12:10:46 (5692): Setting Graphics Controller Options for VM.
2023-03-18 12:10:47 (5692): Setting Boot Options for VM.
2023-03-18 12:10:47 (5692): Setting Network Configuration for NAT.
2023-03-18 12:10:47 (5692): Enabling VM Network Access.
2023-03-18 12:10:48 (5692): Disabling USB Support for VM.
2023-03-18 12:10:48 (5692): Disabling COM Port Support for VM.
2023-03-18 12:10:48 (5692): Disabling LPT Port Support for VM.
2023-03-18 12:10:48 (5692): Disabling Audio Support for VM.
2023-03-18 12:10:49 (5692): Disabling Clipboard Support for VM.
2023-03-18 12:10:49 (5692): Disabling Drag and Drop Support for VM.
2023-03-18 12:10:49 (5692): Adding storage controller(s) to VM.
2023-03-18 12:10:49 (5692): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2023-03-18 12:10:50 (5692): Adding VirtualBox Guest Additions to VM.
2023-03-18 12:10:50 (5692): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2023-03-18 12:10:50 (5692): forwarding host port 64228 to guest port 80
2023-03-18 12:10:51 (5692): Enabling remote desktop for VM.
2023-03-18 12:10:51 (5692): Enabling shared directory for VM.
2023-03-18 12:10:52 (5692): Starting VM using VBoxManage interface. (boinc_46ace7aeb1f1794b, slot#1)
2023-03-18 12:10:59 (5692): Successfully started VM. (PID = '1664')
2023-03-18 12:10:59 (5692): Reporting VM Process ID to BOINC.
2023-03-18 12:10:59 (5692): Guest Log: BIOS: VirtualBox 6.1.40
2023-03-18 12:10:59 (5692): Guest Log: CPUID EDX: 0x178bfbff
2023-03-18 12:10:59 (5692): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2023-03-18 12:10:59 (5692): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2023-03-18 12:10:59 (5692): VM state change detected. (old = 'poweredoff', new = 'running')
2023-03-18 12:10:59 (5692): Detected: Web Application Enabled (http://localhost:64228)
2023-03-18 12:10:59 (5692): Detected: Remote Desktop Enabled (localhost:64229)
2023-03-18 12:10:59 (5692): Preference change detected
2023-03-18 12:10:59 (5692): Setting CPU throttle for VM. (100%)
2023-03-18 12:10:59 (5692): Setting checkpoint interval to 1200 seconds. (Higher value of (Preference: 1200 seconds) or (Vbox_job.xml: 900 seconds))
2023-03-18 12:11:01 (5692): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2023-03-18 12:11:01 (5692): Guest Log: BIOS: Booting from Hard Disk...
2023-03-18 12:11:04 (5692): Guest Log: BIOS: KBD: unsupported int 16h function 03
2023-03-18 12:11:04 (5692): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2023-03-18 12:11:04 (5692): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2023-03-18 12:11:04 (5692): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2023-03-18 12:11:04 (5692): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2023-03-18 12:11:04 (5692): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2023-03-18 12:11:04 (5692): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2023-03-18 12:11:04 (5692): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2023-03-18 12:11:04 (5692): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2023-03-18 12:11:04 (5692): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2023-03-18 12:11:04 (5692): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2023-03-18 12:11:04 (5692): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2023-03-18 12:11:04 (5692): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2023-03-18 12:11:04 (5692): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2023-03-18 12:11:04 (5692): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2023-03-18 12:11:04 (5692): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2023-03-18 12:11:04 (5692): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2023-03-18 12:11:04 (5692): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2023-03-18 12:11:04 (5692): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2023-03-18 12:11:04 (5692): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2023-03-18 12:11:04 (5692): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2023-03-18 12:11:04 (5692): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2023-03-18 12:11:04 (5692): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2023-03-18 12:11:04 (5692): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2023-03-18 12:11:04 (5692): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2023-03-18 12:11:04 (5692): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2023-03-18 12:11:04 (5692): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2023-03-18 12:11:04 (5692): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2023-03-18 12:11:04 (5692): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2023-03-18 12:11:04 (5692): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2023-03-18 12:11:04 (5692): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2023-03-18 12:11:04 (5692): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2023-03-18 12:11:12 (5692): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2023-03-18 12:11:12 (5692): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2023-03-18 12:11:25 (5692): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2023-03-18 12:11:25 (5692): Guest Log: 00:00:00.000219 main     Log opened 2023-03-18T12:11:23.187274000Z
2023-03-18 12:11:25 (5692): Guest Log: 00:00:00.000401 main     OS Product: Linux
2023-03-18 12:11:25 (5692): Guest Log: 00:00:00.000502 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2023-03-18 12:11:25 (5692): Guest Log: 00:00:00.000545 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2023-03-18 12:11:25 (5692): Guest Log: 00:00:00.000680 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2023-03-18 12:11:25 (5692): Guest Log: 00:00:00.000682 main     Process ID: 1249
2023-03-18 12:11:25 (5692): Guest Log: 00:00:00.000683 main     Package type: LINUX_64BITS_GENERIC
2023-03-18 12:11:25 (5692): Guest Log: 00:00:00.003143 main     5.2.32 r132073 started. Verbose level = 0
2023-03-18 12:11:25 (5692): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2023-03-18 12:11:25 (5692): Guest Log: [INFO] Mounting shared directory
2023-03-18 12:11:25 (5692): Guest Log: [INFO] Checking for init_data.xml
2023-03-18 12:11:35 (5692): Guest Log: 00:00:10.005915 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 490 671 000ns (GuestNow=1 679 137 894 701 627 000 ns GuestLast=1 679 141 483 192 298 000 ns fSetTimeLastLoop=true )
2023-03-18 12:11:56 (5692): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2023-03-18 12:11:56 (5692): Guest Log: [INFO] Detected branch: dev
2023-03-18 12:11:56 (5692): Guest Log: This is the dev version of the ATLAS job wrapper
2023-03-18 12:11:56 (5692): Guest Log: Copying input files
2023-03-18 12:12:02 (5692): Guest Log: Copied input files into RunAtlas.
2023-03-18 12:12:02 (5692): Guest Log: Detected user-configured HTTP proxy at http://10.116.178.201:3128 - will set in /etc/cvmfs/default.local
2023-03-18 12:12:09 (5692): Guest Log: Running cvmfs_config stat atlas.cern.ch
2023-03-18 12:12:09 (5692): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2023-03-18 12:12:09 (5692): Guest Log: 2.6.3.0 1532 0 29788 116889 4 1 3118176 4096000 0 65024 0 0 n/a 819 2625 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://10.116.178.201:3128 1
2023-03-18 12:12:11 (5692): Guest Log: copied the webapp to /var/www
2023-03-18 12:12:11 (5692): Guest Log: ATHENA_PROC_NUMBER=5
2023-03-18 12:12:11 (5692): Guest Log: ATHENA_CORE_NUMBER=5
2023-03-18 12:12:11 (5692): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2023-03-18 12:12:11 (5692): Guest Log:  *** Starting ATLAS job. (PandaID=5785059709 taskID=32777692) ***
2023-03-18 13:51:20 (5692): Status Report: Elapsed Time: '6000.829578'
2023-03-18 13:51:20 (5692): Status Report: CPU Time: '18903.625000'
2023-03-18 15:31:41 (5692): Status Report: Elapsed Time: '12001.106936'
2023-03-18 15:31:41 (5692): Status Report: CPU Time: '48865.953125'
2023-03-18 17:12:00 (5692): Status Report: Elapsed Time: '18001.951464'
2023-03-18 17:12:00 (5692): Status Report: CPU Time: '78868.234375'
2023-03-18 18:40:58 (5692): Guest Log:  *** Job finished ***
2023-03-18 18:40:58 (5692): Guest Log:  *** The last 20 lines of the pilot log: ***
2023-03-18 18:40:58 (5692): Guest Log: 2023-03-18 17:39:54,371 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
2023-03-18 18:40:58 (5692): Guest Log: 2023-03-18 17:39:57,385 | INFO     | [data] queue_monitor thread has finished
2023-03-18 18:40:58 (5692): Guest Log: 2023-03-18 17:40:01,357 | INFO     | job.realtimelogging is not enabled
2023-03-18 18:40:58 (5692): Guest Log: 2023-03-18 17:40:01,357 | INFO     | [payload] run_realtimelog thread has finished
2023-03-18 18:40:58 (5692): Guest Log: 2023-03-18 17:40:46,410 | WARNING  | no jobs in monitored_payloads queue (waited for 62 s)
2023-03-18 18:40:58 (5692): Guest Log: 2023-03-18 17:40:46,410 | INFO     | [job] job monitor thread has finished
2023-03-18 18:40:58 (5692): Guest Log: 2023-03-18 17:40:46,610 | INFO     | end of generic workflow (traces error code: 0)
2023-03-18 18:40:58 (5692): Guest Log: 2023-03-18 17:40:46,611 | INFO     | traces error code: 0
2023-03-18 18:40:58 (5692): Guest Log: 2023-03-18 17:40:46,611 | INFO     | pilot has finished
2023-03-18 18:40:58 (5692): Guest Log: 2023-03-18 17:40:46,940 [wrapper] ==== pilot stdout END ====
2023-03-18 18:40:58 (5692): Guest Log: 2023-03-18 17:40:46,950 [wrapper] ==== wrapper stdout RESUME ====
2023-03-18 18:40:58 (5692): Guest Log: 2023-03-18 17:40:46,961 [wrapper] pilotpid: 5360
2023-03-18 18:40:58 (5692): Guest Log: 2023-03-18 17:40:46,970 [wrapper] Pilot exit status: 0
2023-03-18 18:40:58 (5692): Guest Log: 2023-03-18 17:40:47,196 [wrapper] pandaids: 5785059709
2023-03-18 18:40:58 (5692): Guest Log: 2023-03-18 17:40:47,219 [wrapper] apfmon messages muted
2023-03-18 18:40:58 (5692): Guest Log: 2023-03-18 17:40:47,227 [wrapper] Test setup, not cleaning
2023-03-18 18:40:58 (5692): Guest Log: 2023-03-18 17:40:47,236 [wrapper] ==== wrapper stdout END ====
2023-03-18 18:40:58 (5692): Guest Log: 2023-03-18 17:40:47,246 [wrapper] ==== wrapper stderr END ====
2023-03-18 18:40:58 (5692): Guest Log: 2023-03-18 17:40:47,265 [wrapper] wrapperexiting ec=0, duration=23313
2023-03-18 18:40:58 (5692): Guest Log: 2023-03-18 17:40:47,273 [wrapper] apfmon messages muted
2023-03-18 18:40:58 (5692): Guest Log:  *** Error codes and diagnostics ***
2023-03-18 18:40:58 (5692): Guest Log:     "exeErrorCode": 0,
2023-03-18 18:40:58 (5692): Guest Log:     "exeErrorDiag": "",
2023-03-18 18:40:58 (5692): Guest Log:     "pilotErrorCode": 0,
2023-03-18 18:40:58 (5692): Guest Log:     "pilotErrorDiag": "",
2023-03-18 18:40:58 (5692): Guest Log:  *** Listing of results directory ***
2023-03-18 18:40:58 (5692): Guest Log: total 307240
2023-03-18 18:40:58 (5692): Guest Log: -rw-r--r--. 1 atlas atlas    386707 Mar 16 02:23 pilot3.tar.gz
2023-03-18 18:40:58 (5692): Guest Log: -rw-r--r--. 1 atlas atlas      4336 Mar 16 03:05 queuedata.json
2023-03-18 18:40:58 (5692): Guest Log: -rwx------. 1 atlas atlas     26447 Mar 16 03:06 runpilot2-wrapper.sh
2023-03-18 18:40:58 (5692): Guest Log: -rwxr-xr-x. 1 atlas atlas      8809 Mar 18 11:11 init_data.xml
2023-03-18 18:40:58 (5692): Guest Log: -rwxr-xr-x. 1 atlas atlas    398328 Mar 18 11:11 input.tar.gz
2023-03-18 18:40:58 (5692): Guest Log: -rwxr-xr-x. 1 atlas atlas     17076 Mar 18 11:11 start_atlas.sh
2023-03-18 18:40:58 (5692): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Mar 18 11:12 EVNT.29838250._000006.pool.root.1 -> /data/./ATLAS.root_0
2023-03-18 18:40:58 (5692): Guest Log: -rw-r--r--. 1 atlas atlas      2465 Mar 18 11:12 pandaJob.out
2023-03-18 18:40:58 (5692): Guest Log: -rw-------. 1 atlas atlas       449 Mar 18 11:12 setup.sh.local
2023-03-18 18:40:58 (5692): Guest Log: -rw-------. 1 atlas atlas    979306 Mar 18 11:12 agis_schedconf.cvmfs.json
2023-03-18 18:40:58 (5692): Guest Log: -rw-------. 1 atlas atlas   1426500 Mar 18 11:13 cric_ddmendpoints.json
2023-03-18 18:40:58 (5692): Guest Log: drwx------. 4 atlas atlas       245 Mar 18 11:14 pilot3
2023-03-18 18:40:58 (5692): Guest Log: -rw-------. 1 atlas atlas 308988115 Mar 18 17:29 HITS.32777692._000116.pool.root.1
2023-03-18 18:40:58 (5692): Guest Log: -rw-------. 1 atlas atlas      1034 Mar 18 17:33 memory_monitor_summary.json
2023-03-18 18:40:58 (5692): Guest Log: -rw-------. 1 atlas atlas    349747 Mar 18 17:36 log.32777692._000116.job.log.tgz.1
2023-03-18 18:40:58 (5692): Guest Log: -rw-------. 1 atlas atlas      7619 Mar 18 17:39 heartbeat.json
2023-03-18 18:40:58 (5692): Guest Log: -rw-------. 1 atlas atlas      3018 Mar 18 17:40 pilotlog.txt
2023-03-18 18:40:58 (5692): Guest Log: -rw-------. 1 atlas atlas    787091 Mar 18 17:40 log.32777692._000116.job.log.1
2023-03-18 18:40:58 (5692): Guest Log: -rw-------. 1 atlas atlas       345 Mar 18 17:40 output.list
2023-03-18 18:40:58 (5692): Guest Log: -rw-r--r--. 1 atlas atlas       620 Mar 18 17:40 runtime_log
2023-03-18 18:40:58 (5692): Guest Log: -rw-------. 1 atlas atlas   1157120 Mar 18 17:40 result.tar.gz
2023-03-18 18:40:58 (5692): Guest Log: -rw-------. 1 atlas atlas       643 Mar 18 17:40 zUnKDmH8sw2n7Olcko1bjSoqABFKDmABFKDm7AsVDmrQGKDmocPT0m.diag
2023-03-18 18:40:58 (5692): Guest Log: -rw-r--r--. 1 atlas atlas     10239 Mar 18 17:40 runtime_log.err
2023-03-18 18:40:58 (5692): Guest Log: Looking for outputfile HITS.32777692._000116.pool.root.1
2023-03-18 18:40:58 (5692): Guest Log: HITS file was successfully produced
2023-03-18 18:40:58 (5692): Guest Log: -rw-------. 1 atlas atlas 308988115 Mar 18 17:29 /home/atlas/RunAtlas/HITS.32777692._000116.pool.root.1
2023-03-18 18:41:01 (5692): Guest Log: Successfully finished the ATLAS job!
2023-03-18 18:41:01 (5692): Guest Log: Copying the results back to the shared directory!
2023-03-18 18:41:01 (5692): Guest Log:  *** Contents of shared directory: ***
2023-03-18 18:41:01 (5692): Guest Log: total 731744
2023-03-18 18:41:01 (5692): Guest Log: -rwxrwxrwx. 1 root root 438720602 Mar 18 11:10 ATLAS.root_0
2023-03-18 18:41:01 (5692): Guest Log: -rwxrwxrwx. 1 root root 308988115 Mar 18 17:29 HITS.pool.root.1
2023-03-18 18:41:01 (5692): Guest Log: -rwxrwxrwx. 1 root root      8809 Mar 18 11:10 init_data.xml
2023-03-18 18:41:01 (5692): Guest Log: -rwxrwxrwx. 1 root root    398328 Mar 17 04:11 input.tar.gz
2023-03-18 18:41:01 (5692): Guest Log: -rwxrwxrwx. 1 root root   1157120 Mar 18  2023 result.tar.gz
2023-03-18 18:41:01 (5692): Guest Log: -rwxrwxrwx. 1 root root     17076 Mar 17 04:11 start_atlas.sh
2023-03-18 18:41:01 (5692): Guest Log:  *** Success! Shutting down the machine. ***
2023-03-18 18:41:01 (5692): VM Completion File Detected.
2023-03-18 18:41:01 (5692): Powering off VM.
2023-03-18 18:41:01 (5692): Successfully stopped VM.
2023-03-18 18:41:01 (5692): Deregistering VM. (boinc_46ace7aeb1f1794b, slot#1)
2023-03-18 18:41:02 (5692): Removing network bandwidth throttle group from VM.
2023-03-18 18:41:02 (5692): Removing VM from VirtualBox.
18:41:07 (5692): called boinc_finish(0)

</stderr_txt>
]]>

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