Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
2023-03-20 17:20:25 (9156): Detected: vboxwrapper 26206
2023-03-20 17:20:26 (9156): Detected: BOINC client v7.20.2
2023-03-20 17:20:26 (9156): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2023-03-20 17:20:26 (9156): Successfully copied 'init_data.xml' to the shared directory.
2023-03-20 17:20:27 (9156): Create VM. (boinc_8c1f3f27b61dd8b5, slot#3)
2023-03-20 17:20:27 (9156): Setting Memory Size for VM. (2241MB)
2023-03-20 17:20:28 (9156): Setting CPU Count for VM. (2)
2023-03-20 17:20:28 (9156): Setting Chipset Options for VM.
2023-03-20 17:20:28 (9156): Setting Graphics Controller Options for VM.
2023-03-20 17:20:28 (9156): Setting Boot Options for VM.
2023-03-20 17:20:29 (9156): Setting Network Configuration for NAT.
2023-03-20 17:20:29 (9156): Enabling VM Network Access.
2023-03-20 17:20:29 (9156): Disabling USB Support for VM.
2023-03-20 17:20:29 (9156): Disabling COM Port Support for VM.
2023-03-20 17:20:30 (9156): Disabling LPT Port Support for VM.
2023-03-20 17:20:30 (9156): Disabling Audio Support for VM.
2023-03-20 17:20:30 (9156): Disabling Clipboard Support for VM.
2023-03-20 17:20:30 (9156): Disabling Drag and Drop Support for VM.
2023-03-20 17:20:31 (9156): Adding storage controller(s) to VM.
2023-03-20 17:20:31 (9156): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2023-03-20 17:20:34 (9156): Adding VirtualBox Guest Additions to VM.
2023-03-20 17:20:34 (9156): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2023-03-20 17:20:34 (9156): forwarding host port 60240 to guest port 80
2023-03-20 17:20:35 (9156): Enabling remote desktop for VM.
2023-03-20 17:20:35 (9156): Enabling shared directory for VM.
2023-03-20 17:20:36 (9156): Starting VM using VBoxManage interface. (boinc_8c1f3f27b61dd8b5, slot#3)
2023-03-20 17:20:43 (9156): Successfully started VM. (PID = '968')
2023-03-20 17:20:43 (9156): Reporting VM Process ID to BOINC.
2023-03-20 17:20:43 (9156): Guest Log: BIOS: VirtualBox 7.0.6
2023-03-20 17:20:43 (9156): Guest Log: CPUID EDX: 0x178bfbff
2023-03-20 17:20:43 (9156): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2023-03-20 17:20:43 (9156): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2023-03-20 17:20:43 (9156): VM state change detected. (old = 'poweredoff', new = 'running')
2023-03-20 17:20:43 (9156): Detected: Web Application Enabled (http://localhost:60240)
2023-03-20 17:20:43 (9156): Detected: Remote Desktop Enabled (localhost:60241)
2023-03-20 17:20:43 (9156): Preference change detected
2023-03-20 17:20:43 (9156): Setting CPU throttle for VM. (100%)
2023-03-20 17:20:44 (9156): Setting network throttle for VM. (4096KB)
2023-03-20 17:20:44 (9156): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2023-03-20 17:20:45 (9156): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2023-03-20 17:20:45 (9156): Guest Log: BIOS: Booting from Hard Disk...
2023-03-20 17:20:48 (9156): Guest Log: BIOS: KBD: unsupported int 16h function 03
2023-03-20 17:20:48 (9156): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2023-03-20 17:20:48 (9156): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2023-03-20 17:20:48 (9156): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2023-03-20 17:20:48 (9156): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2023-03-20 17:20:48 (9156): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2023-03-20 17:20:48 (9156): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2023-03-20 17:20:48 (9156): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2023-03-20 17:20:48 (9156): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2023-03-20 17:20:48 (9156): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2023-03-20 17:20:48 (9156): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2023-03-20 17:20:48 (9156): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2023-03-20 17:20:48 (9156): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2023-03-20 17:20:48 (9156): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2023-03-20 17:20:48 (9156): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2023-03-20 17:20:48 (9156): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2023-03-20 17:20:48 (9156): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2023-03-20 17:20:48 (9156): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2023-03-20 17:20:48 (9156): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2023-03-20 17:20:48 (9156): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2023-03-20 17:20:48 (9156): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2023-03-20 17:20:48 (9156): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2023-03-20 17:20:48 (9156): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2023-03-20 17:20:48 (9156): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2023-03-20 17:20:48 (9156): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2023-03-20 17:20:48 (9156): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2023-03-20 17:20:48 (9156): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2023-03-20 17:20:48 (9156): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2023-03-20 17:20:48 (9156): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2023-03-20 17:20:48 (9156): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2023-03-20 17:20:48 (9156): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2023-03-20 17:20:48 (9156): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2023-03-20 17:20:53 (9156): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2023-03-20 17:20:53 (9156): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2023-03-20 17:20:59 (9156): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2023-03-20 17:20:59 (9156): Guest Log: 00:00:00.000226 main     Log opened 2023-03-20T17:20:58.092383000Z
2023-03-20 17:20:59 (9156): Guest Log: 00:00:00.000330 main     OS Product: Linux
2023-03-20 17:20:59 (9156): Guest Log: 00:00:00.000375 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2023-03-20 17:20:59 (9156): Guest Log: 00:00:00.000429 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2023-03-20 17:20:59 (9156): Guest Log: 00:00:00.000471 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2023-03-20 17:20:59 (9156): Guest Log: 00:00:00.000472 main     Process ID: 1199
2023-03-20 17:20:59 (9156): Guest Log: 00:00:00.000473 main     Package type: LINUX_64BITS_GENERIC
2023-03-20 17:20:59 (9156): Guest Log: 00:00:00.001807 main     5.2.32 r132073 started. Verbose level = 0
2023-03-20 17:20:59 (9156): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2023-03-20 17:20:59 (9156): Guest Log: [INFO] Mounting shared directory
2023-03-20 17:20:59 (9156): Guest Log: [INFO] Checking for init_data.xml
2023-03-20 17:21:03 (9156): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2023-03-20 17:21:03 (9156): Guest Log: [INFO] Detected branch: dev
2023-03-20 17:21:03 (9156): Guest Log: This is the dev version of the ATLAS job wrapper
2023-03-20 17:21:03 (9156): Guest Log: Copying input files
2023-03-20 17:21:06 (9156): Guest Log: Copied input files into RunAtlas.
2023-03-20 17:21:06 (9156): Guest Log: This VM did not configure a local http proxy via BOINC.
2023-03-20 17:21:06 (9156): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2023-03-20 17:21:06 (9156): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2023-03-20 17:21:06 (9156): Guest Log: Further information can be found at the LHC@home message board.
2023-03-20 17:21:09 (9156): Guest Log: 00:00:10.006373 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 617 491 000ns (GuestNow=1 679 325 669 479 997 000 ns GuestLast=1 679 332 858 097 488 000 ns fSetTimeLastLoop=true )
2023-03-20 17:21:16 (9156): Guest Log: Running cvmfs_config stat atlas.cern.ch
2023-03-20 17:21:16 (9156): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2023-03-20 17:21:16 (9156): Guest Log: 2.6.3.0 1482 0 32120 116968 3 1 3116360 4096000 0 65024 0 0 n/a 1 1 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2023-03-20 17:21:17 (9156): Guest Log: copied the webapp to /var/www
2023-03-20 17:21:17 (9156): Guest Log: ATHENA_PROC_NUMBER=2
2023-03-20 17:21:17 (9156): Guest Log: ATHENA_CORE_NUMBER=2
2023-03-20 17:21:17 (9156): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2023-03-20 17:21:17 (9156): Guest Log:  *** Starting ATLAS job. (PandaID=5753961892 taskID=32413688) ***
2023-03-20 18:49:39 (9156): Guest Log:  *** Job finished ***
2023-03-20 18:49:39 (9156): Guest Log:  *** The last 20 lines of the pilot log: ***
2023-03-20 18:49:39 (9156): Guest Log: 2023-03-20 16:49:15,574 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
2023-03-20 18:49:39 (9156): Guest Log: 2023-03-20 16:49:18,617 | INFO     | [data] queue_monitor thread has finished
2023-03-20 18:49:39 (9156): Guest Log: 2023-03-20 16:49:28,117 | INFO     | job.realtimelogging is not enabled
2023-03-20 18:49:39 (9156): Guest Log: 2023-03-20 16:49:28,117 | INFO     | [payload] run_realtimelog thread has finished
2023-03-20 18:49:39 (9156): Guest Log: 2023-03-20 16:49:37,739 | WARNING  | no jobs in monitored_payloads queue (waited for 72 s)
2023-03-20 18:49:39 (9156): Guest Log: 2023-03-20 16:49:37,739 | INFO     | [job] job monitor thread has finished
2023-03-20 18:49:39 (9156): Guest Log: 2023-03-20 16:49:38,393 | INFO     | end of generic workflow (traces error code: 0)
2023-03-20 18:49:39 (9156): Guest Log: 2023-03-20 16:49:38,393 | INFO     | traces error code: 0
2023-03-20 18:49:39 (9156): Guest Log: 2023-03-20 16:49:38,393 | INFO     | pilot has finished
2023-03-20 18:49:39 (9156): Guest Log: 2023-03-20 16:49:38,498 [wrapper] ==== pilot stdout END ====
2023-03-20 18:49:39 (9156): Guest Log: 2023-03-20 16:49:38,505 [wrapper] ==== wrapper stdout RESUME ====
2023-03-20 18:49:39 (9156): Guest Log: 2023-03-20 16:49:38,512 [wrapper] pilotpid: 5278
2023-03-20 18:49:39 (9156): Guest Log: 2023-03-20 16:49:38,518 [wrapper] Pilot exit status: 0
2023-03-20 18:49:39 (9156): Guest Log: 2023-03-20 16:49:38,878 [wrapper] pandaids: 5753961892
2023-03-20 18:49:39 (9156): Guest Log: 2023-03-20 16:49:38,889 [wrapper] apfmon messages muted
2023-03-20 18:49:39 (9156): Guest Log: 2023-03-20 16:49:38,894 [wrapper] Test setup, not cleaning
2023-03-20 18:49:39 (9156): Guest Log: 2023-03-20 16:49:38,899 [wrapper] ==== wrapper stdout END ====
2023-03-20 18:49:39 (9156): Guest Log: 2023-03-20 16:49:38,905 [wrapper] ==== wrapper stderr END ====
2023-03-20 18:49:39 (9156): Guest Log: 2023-03-20 16:49:38,914 [wrapper] wrapperexiting ec=0, duration=5300
2023-03-20 18:49:39 (9156): Guest Log: 2023-03-20 16:49:38,920 [wrapper] apfmon messages muted
2023-03-20 18:49:39 (9156): Guest Log:  *** Error codes and diagnostics ***
2023-03-20 18:49:39 (9156): Guest Log:     "exeErrorCode": 0,
2023-03-20 18:49:39 (9156): Guest Log:     "exeErrorDiag": "",
2023-03-20 18:49:39 (9156): Guest Log:     "pilotErrorCode": 0,
2023-03-20 18:49:39 (9156): Guest Log:     "pilotErrorDiag": "",
2023-03-20 18:49:39 (9156): Guest Log:  *** Listing of results directory ***
2023-03-20 18:49:39 (9156): Guest Log: total 33288
2023-03-20 18:49:39 (9156): Guest Log: -rw-r--r--. 1 atlas atlas   386707 Mar 20 12:27 pilot3.tar.gz
2023-03-20 18:49:39 (9156): Guest Log: -rw-r--r--. 1 atlas atlas     4336 Mar 20 13:03 queuedata.json
2023-03-20 18:49:39 (9156): Guest Log: -rwx------. 1 atlas atlas    26447 Mar 20 13:04 runpilot2-wrapper.sh
2023-03-20 18:49:39 (9156): Guest Log: -rwxr-xr-x. 1 atlas atlas     8800 Mar 20 15:21 init_data.xml
2023-03-20 18:49:39 (9156): Guest Log: -rwxr-xr-x. 1 atlas atlas   398360 Mar 20 15:21 input.tar.gz
2023-03-20 18:49:39 (9156): Guest Log: -rwxr-xr-x. 1 atlas atlas    17341 Mar 20 15:21 start_atlas.sh
2023-03-20 18:49:39 (9156): Guest Log: lrwxrwxrwx. 1 atlas atlas       20 Mar 20 15:21 EVNT.29838250._000010.pool.root.1 -> /data/./ATLAS.root_0
2023-03-20 18:49:39 (9156): Guest Log: -rw-r--r--. 1 atlas atlas     2552 Mar 20 15:21 pandaJob.out
2023-03-20 18:49:39 (9156): Guest Log: -rw-------. 1 atlas atlas      412 Mar 20 15:21 setup.sh.local
2023-03-20 18:49:40 (9156): Guest Log: -rw-------. 1 atlas atlas   978991 Mar 20 15:21 agis_schedconf.cvmfs.json
2023-03-20 18:49:40 (9156): Guest Log: -rw-------. 1 atlas atlas  1426500 Mar 20 15:21 agis_ddmendpoints.agis.ALL.json
2023-03-20 18:49:40 (9156): Guest Log: drwx------. 4 atlas atlas      245 Mar 20 15:21 pilot3
2023-03-20 18:49:40 (9156): Guest Log: -rw-------. 1 atlas atlas 29915086 Mar 20 16:48 HITS.32413688._000229-1878153-1679317467.pool.root.1
2023-03-20 18:49:40 (9156): Guest Log: -rw-------. 1 atlas atlas     1053 Mar 20 16:49 memory_monitor_summary.json
2023-03-20 18:49:40 (9156): Guest Log: -rw-------. 1 atlas atlas   184385 Mar 20 16:49 log.32413688._000229-1878153-1679317467.job.log.tgz.1
2023-03-20 18:49:40 (9156): Guest Log: -rw-------. 1 atlas atlas     7742 Mar 20 16:49 heartbeat.json
2023-03-20 18:49:40 (9156): Guest Log: -rw-------. 1 atlas atlas     2926 Mar 20 16:49 pilotlog.txt
2023-03-20 18:49:40 (9156): Guest Log: -rw-------. 1 atlas atlas   228181 Mar 20 16:49 log.32413688._000229-1878153-1679317467.job.log.1
2023-03-20 18:49:40 (9156): Guest Log: -rw-------. 1 atlas atlas      402 Mar 20 16:49 output.list
2023-03-20 18:49:40 (9156): Guest Log: -rw-r--r--. 1 atlas atlas      677 Mar 20 16:49 runtime_log
2023-03-20 18:49:40 (9156): Guest Log: -rw-------. 1 atlas atlas   430080 Mar 20 16:49 result.tar.gz
2023-03-20 18:49:40 (9156): Guest Log: -rw-r--r--. 1 atlas atlas    10759 Mar 20 16:49 runtime_log.err
2023-03-20 18:49:40 (9156): Guest Log: -rw-------. 1 atlas atlas      652 Mar 20 16:49 hnZMDmnMUy2n7Olcko1bjSoqABFKDmABFKDm7AsVDmaTGKDmJMfWZm.diag
2023-03-20 18:49:40 (9156): Guest Log: Looking for outputfile HITS.32413688._000229-1878153-1679317467.pool.root.1
2023-03-20 18:49:40 (9156): Guest Log: HITS file was successfully produced
2023-03-20 18:49:40 (9156): Guest Log: -rw-------. 1 atlas atlas 29915086 Mar 20 16:48 /home/atlas/RunAtlas/HITS.32413688._000229-1878153-1679317467.pool.root.1
2023-03-20 18:49:40 (9156): Guest Log: Successfully finished the ATLAS job!
2023-03-20 18:49:40 (9156): Guest Log: Copying the results back to the shared directory!
2023-03-20 18:49:40 (9156): Guest Log:  *** Contents of shared directory: ***
2023-03-20 18:49:40 (9156): Guest Log: total 456216
2023-03-20 18:49:40 (9156): Guest Log: -rwxrwxrwx. 1 root root 436382292 Mar 20 15:20 ATLAS.root_0
2023-03-20 18:49:40 (9156): Guest Log: -rwxrwxrwx. 1 root root  29915086 Mar 20 16:48 HITS.pool.root.1
2023-03-20 18:49:40 (9156): Guest Log: -rwxrwxrwx. 1 root root      8800 Mar 20 15:20 init_data.xml
2023-03-20 18:49:40 (9156): Guest Log: -rwxrwxrwx. 1 root root    398360 Mar 20 15:18 input.tar.gz
2023-03-20 18:49:40 (9156): Guest Log: -rwxrwxrwx. 1 root root    430080 Mar 20 16:49 result.tar.gz
2023-03-20 18:49:40 (9156): Guest Log: -rwxrwxrwx. 1 root root     17341 Mar 20 15:18 start_atlas.sh
2023-03-20 18:49:40 (9156): Guest Log:  *** Success! Shutting down the machine. ***
2023-03-20 18:49:40 (9156): VM Completion File Detected.
2023-03-20 18:49:40 (9156): Powering off VM.
2023-03-20 18:49:40 (9156): Successfully stopped VM.
2023-03-20 18:49:40 (9156): Deregistering VM. (boinc_8c1f3f27b61dd8b5, slot#3)
2023-03-20 18:49:40 (9156): Removing network bandwidth throttle group from VM.
2023-03-20 18:49:40 (9156): Removing VM from VirtualBox.
18:49:46 (9156): called boinc_finish(0)

</stderr_txt>
]]>

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