Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
2023-03-21 10:41:31 (33832): Detected: vboxwrapper 26206
2023-03-21 10:41:31 (33832): Detected: BOINC client v7.20.2
2023-03-21 10:41:31 (33832): Detected: VirtualBox VboxManage Interface (Version: 6.1.40)
2023-03-21 10:41:32 (33832): Successfully copied 'init_data.xml' to the shared directory.
2023-03-21 10:41:32 (33832): Create VM. (boinc_fc32796814156f95, slot#6)
2023-03-21 10:41:33 (33832): Setting Memory Size for VM. (4500MB)
2023-03-21 10:41:33 (33832): Setting CPU Count for VM. (5)
2023-03-21 10:41:33 (33832): Setting Chipset Options for VM.
2023-03-21 10:41:33 (33832): Setting Graphics Controller Options for VM.
2023-03-21 10:41:34 (33832): Setting Boot Options for VM.
2023-03-21 10:41:34 (33832): Setting Network Configuration for NAT.
2023-03-21 10:41:34 (33832): Enabling VM Network Access.
2023-03-21 10:41:34 (33832): Disabling USB Support for VM.
2023-03-21 10:41:35 (33832): Disabling COM Port Support for VM.
2023-03-21 10:41:35 (33832): Disabling LPT Port Support for VM.
2023-03-21 10:41:35 (33832): Disabling Audio Support for VM.
2023-03-21 10:41:36 (33832): Disabling Clipboard Support for VM.
2023-03-21 10:41:36 (33832): Disabling Drag and Drop Support for VM.
2023-03-21 10:41:36 (33832): Adding storage controller(s) to VM.
2023-03-21 10:41:36 (33832): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2023-03-21 10:41:37 (33832): Adding VirtualBox Guest Additions to VM.
2023-03-21 10:41:37 (33832): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2023-03-21 10:41:37 (33832): forwarding host port 61428 to guest port 80
2023-03-21 10:41:38 (33832): Enabling remote desktop for VM.
2023-03-21 10:41:38 (33832): Enabling shared directory for VM.
2023-03-21 10:41:39 (33832): Starting VM using VBoxManage interface. (boinc_fc32796814156f95, slot#6)
2023-03-21 10:41:44 (33832): Successfully started VM. (PID = '21132')
2023-03-21 10:41:44 (33832): Reporting VM Process ID to BOINC.
2023-03-21 10:41:44 (33832): Guest Log: BIOS: VirtualBox 6.1.40
2023-03-21 10:41:44 (33832): Guest Log: CPUID EDX: 0x178bfbff
2023-03-21 10:41:44 (33832): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2023-03-21 10:41:44 (33832): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2023-03-21 10:41:44 (33832): VM state change detected. (old = 'poweredoff', new = 'running')
2023-03-21 10:41:44 (33832): Detected: Web Application Enabled (http://localhost:61428)
2023-03-21 10:41:44 (33832): Detected: Remote Desktop Enabled (localhost:61432)
2023-03-21 10:41:44 (33832): Preference change detected
2023-03-21 10:41:44 (33832): Setting CPU throttle for VM. (100%)
2023-03-21 10:41:44 (33832): Setting checkpoint interval to 1200 seconds. (Higher value of (Preference: 1200 seconds) or (Vbox_job.xml: 900 seconds))
2023-03-21 10:41:46 (33832): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2023-03-21 10:41:46 (33832): Guest Log: BIOS: Booting from Hard Disk...
2023-03-21 10:41:49 (33832): Guest Log: BIOS: KBD: unsupported int 16h function 03
2023-03-21 10:41:49 (33832): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2023-03-21 10:41:49 (33832): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2023-03-21 10:41:49 (33832): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2023-03-21 10:41:49 (33832): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2023-03-21 10:41:49 (33832): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2023-03-21 10:41:49 (33832): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2023-03-21 10:41:49 (33832): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2023-03-21 10:41:49 (33832): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2023-03-21 10:41:49 (33832): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2023-03-21 10:41:49 (33832): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2023-03-21 10:41:49 (33832): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2023-03-21 10:41:49 (33832): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2023-03-21 10:41:49 (33832): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2023-03-21 10:41:49 (33832): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2023-03-21 10:41:49 (33832): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2023-03-21 10:41:49 (33832): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2023-03-21 10:41:49 (33832): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2023-03-21 10:41:49 (33832): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2023-03-21 10:41:49 (33832): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2023-03-21 10:41:49 (33832): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2023-03-21 10:41:49 (33832): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2023-03-21 10:41:49 (33832): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2023-03-21 10:41:49 (33832): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2023-03-21 10:41:49 (33832): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2023-03-21 10:41:49 (33832): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2023-03-21 10:41:49 (33832): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2023-03-21 10:41:49 (33832): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2023-03-21 10:41:49 (33832): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2023-03-21 10:41:49 (33832): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2023-03-21 10:41:49 (33832): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2023-03-21 10:41:49 (33832): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2023-03-21 10:41:53 (33832): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2023-03-21 10:41:53 (33832): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2023-03-21 10:41:58 (33832): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2023-03-21 10:41:58 (33832): Guest Log: 00:00:00.000116 main     Log opened 2023-03-21T10:41:56.429969000Z
2023-03-21 10:41:58 (33832): Guest Log: 00:00:00.000227 main     OS Product: Linux
2023-03-21 10:41:58 (33832): Guest Log: 00:00:00.000252 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2023-03-21 10:41:58 (33832): Guest Log: 00:00:00.000272 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2023-03-21 10:41:58 (33832): Guest Log: 00:00:00.000292 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2023-03-21 10:41:58 (33832): Guest Log: 00:00:00.000293 main     Process ID: 1318
2023-03-21 10:41:58 (33832): Guest Log: 00:00:00.000293 main     Package type: LINUX_64BITS_GENERIC
2023-03-21 10:41:58 (33832): Guest Log: 00:00:00.001000 main     5.2.32 r132073 started. Verbose level = 0
2023-03-21 10:41:58 (33832): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2023-03-21 10:41:58 (33832): Guest Log: [INFO] Mounting shared directory
2023-03-21 10:41:58 (33832): Guest Log: [INFO] Checking for init_data.xml
2023-03-21 10:42:05 (33832): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2023-03-21 10:42:05 (33832): Guest Log: [INFO] Detected branch: dev
2023-03-21 10:42:05 (33832): Guest Log: This is the dev version of the ATLAS job wrapper
2023-03-21 10:42:05 (33832): Guest Log: Copying input files
2023-03-21 10:42:08 (33832): Guest Log: Copied input files into RunAtlas.
2023-03-21 10:42:08 (33832): Guest Log: Detected user-configured HTTP proxy at http://10.116.178.201:3128 - will set in /etc/cvmfs/default.local
2023-03-21 10:42:08 (33832): Guest Log: 00:00:10.004697 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 253 350 000ns (GuestNow=1 679 391 728 178 580 000 ns GuestLast=1 679 395 316 431 930 000 ns fSetTimeLastLoop=true )
2023-03-21 10:42:18 (33832): Guest Log: Running cvmfs_config stat atlas.cern.ch
2023-03-21 10:42:18 (33832): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2023-03-21 10:42:18 (33832): Guest Log: 2.6.3.0 1611 0 31840 116996 4 1 3118176 4096000 0 65024 0 0 n/a 819 2231 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://10.116.178.201:3128 1
2023-03-21 10:42:18 (33832): Guest Log: copied the webapp to /var/www
2023-03-21 10:42:18 (33832): Guest Log: ATHENA_PROC_NUMBER=5
2023-03-21 10:42:18 (33832): Guest Log: ATHENA_CORE_NUMBER=5
2023-03-21 10:42:18 (33832): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2023-03-21 10:42:18 (33832): Guest Log:  *** Starting ATLAS job. (PandaID=5753961892 taskID=32413688) ***
2023-03-21 11:10:44 (33832): Guest Log:  *** Job finished ***
2023-03-21 11:10:44 (33832): Guest Log:  *** The last 20 lines of the pilot log: ***
2023-03-21 11:10:44 (33832): Guest Log: 2023-03-21 10:10:35,209 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
2023-03-21 11:10:44 (33832): Guest Log: 2023-03-21 10:10:38,211 | INFO     | [data] queue_monitor thread has finished
2023-03-21 11:10:44 (33832): Guest Log: 2023-03-21 10:10:38,640 | WARNING  | no jobs in monitored_payloads queue (waited for 112 s)
2023-03-21 11:10:44 (33832): Guest Log: 2023-03-21 10:10:38,640 | INFO     | [job] job monitor thread has finished
2023-03-21 11:10:44 (33832): Guest Log: 2023-03-21 10:10:42,401 | INFO     | job.realtimelogging is not enabled
2023-03-21 11:10:44 (33832): Guest Log: 2023-03-21 10:10:42,401 | INFO     | [payload] run_realtimelog thread has finished
2023-03-21 11:10:44 (33832): Guest Log: 2023-03-21 10:10:42,638 | INFO     | end of generic workflow (traces error code: 0)
2023-03-21 11:10:44 (33832): Guest Log: 2023-03-21 10:10:42,638 | INFO     | traces error code: 0
2023-03-21 11:10:44 (33832): Guest Log: 2023-03-21 10:10:42,639 | INFO     | pilot has finished
2023-03-21 11:10:44 (33832): Guest Log: 2023-03-21 10:10:42,684 [wrapper] ==== pilot stdout END ====
2023-03-21 11:10:44 (33832): Guest Log: 2023-03-21 10:10:42,689 [wrapper] ==== wrapper stdout RESUME ====
2023-03-21 11:10:44 (33832): Guest Log: 2023-03-21 10:10:42,694 [wrapper] pilotpid: 5418
2023-03-21 11:10:44 (33832): Guest Log: 2023-03-21 10:10:42,698 [wrapper] Pilot exit status: 0
2023-03-21 11:10:44 (33832): Guest Log: 2023-03-21 10:10:42,719 [wrapper] pandaids: 5753961892
2023-03-21 11:10:44 (33832): Guest Log: 2023-03-21 10:10:42,730 [wrapper] apfmon messages muted
2023-03-21 11:10:44 (33832): Guest Log: 2023-03-21 10:10:42,734 [wrapper] Test setup, not cleaning
2023-03-21 11:10:44 (33832): Guest Log: 2023-03-21 10:10:42,739 [wrapper] ==== wrapper stdout END ====
2023-03-21 11:10:44 (33832): Guest Log: 2023-03-21 10:10:42,744 [wrapper] ==== wrapper stderr END ====
2023-03-21 11:10:44 (33832): Guest Log: 2023-03-21 10:10:42,754 [wrapper] wrapperexiting ec=0, duration=1704
2023-03-21 11:10:44 (33832): Guest Log: 2023-03-21 10:10:42,759 [wrapper] apfmon messages muted
2023-03-21 11:10:44 (33832): Guest Log:  *** Error codes and diagnostics ***
2023-03-21 11:10:44 (33832): Guest Log:     "exeErrorCode": 0,
2023-03-21 11:10:44 (33832): Guest Log:     "exeErrorDiag": "",
2023-03-21 11:10:44 (33832): Guest Log:     "pilotErrorCode": 0,
2023-03-21 11:10:44 (33832): Guest Log:     "pilotErrorDiag": "",
2023-03-21 11:10:44 (33832): Guest Log:  *** Listing of results directory ***
2023-03-21 11:10:44 (33832): Guest Log: total 33232
2023-03-21 11:10:44 (33832): Guest Log: -rw-r--r--. 1 atlas atlas     4336 Mar 21 08:31 queuedata.json
2023-03-21 11:10:44 (33832): Guest Log: -rw-r--r--. 1 atlas atlas   386707 Mar 21 08:31 pilot3.tar.gz
2023-03-21 11:10:44 (33832): Guest Log: -rwx------. 1 atlas atlas    26447 Mar 21 08:32 runpilot2-wrapper.sh
2023-03-21 11:10:44 (33832): Guest Log: -rwxr-xr-x. 1 atlas atlas    17355 Mar 21 09:42 start_atlas.sh
2023-03-21 11:10:44 (33832): Guest Log: -rwxr-xr-x. 1 atlas atlas   398356 Mar 21 09:42 input.tar.gz
2023-03-21 11:10:44 (33832): Guest Log: -rwxr-xr-x. 1 atlas atlas     8879 Mar 21 09:42 init_data.xml
2023-03-21 11:10:44 (33832): Guest Log: lrwxrwxrwx. 1 atlas atlas       20 Mar 21 09:42 EVNT.29838250._000010.pool.root.1 -> /data/./ATLAS.root_0
2023-03-21 11:10:44 (33832): Guest Log: -rw-r--r--. 1 atlas atlas     2552 Mar 21 09:42 pandaJob.out
2023-03-21 11:10:44 (33832): Guest Log: -rw-------. 1 atlas atlas      449 Mar 21 09:42 setup.sh.local
2023-03-21 11:10:44 (33832): Guest Log: -rw-------. 1 atlas atlas   978995 Mar 21 09:42 agis_schedconf.cvmfs.json
2023-03-21 11:10:44 (33832): Guest Log: -rw-------. 1 atlas atlas  1426500 Mar 21 09:42 agis_ddmendpoints.agis.ALL.json
2023-03-21 11:10:44 (33832): Guest Log: drwx------. 4 atlas atlas      245 Mar 21 09:42 pilot3
2023-03-21 11:10:44 (33832): Guest Log: -rw-------. 1 atlas atlas 30047991 Mar 21 10:10 HITS.32413688._000229-2151730-1679387527.pool.root.1
2023-03-21 11:10:44 (33832): Guest Log: -rw-------. 1 atlas atlas     1026 Mar 21 10:10 memory_monitor_summary.json
2023-03-21 11:10:44 (33832): Guest Log: -rw-------. 1 atlas atlas   210353 Mar 21 10:10 log.32413688._000229-2151730-1679387527.job.log.tgz.1
2023-03-21 11:10:44 (33832): Guest Log: -rw-------. 1 atlas atlas     7715 Mar 21 10:10 heartbeat.json
2023-03-21 11:10:44 (33832): Guest Log: -rw-------. 1 atlas atlas     2927 Mar 21 10:10 pilotlog.txt
2023-03-21 11:10:44 (33832): Guest Log: -rw-------. 1 atlas atlas   103891 Mar 21 10:10 log.32413688._000229-2151730-1679387527.job.log.1
2023-03-21 11:10:44 (33832): Guest Log: -rw-------. 1 atlas atlas      402 Mar 21 10:10 output.list
2023-03-21 11:10:44 (33832): Guest Log: -rw-r--r--. 1 atlas atlas      677 Mar 21 10:10 runtime_log
2023-03-21 11:10:44 (33832): Guest Log: -rw-------. 1 atlas atlas   337920 Mar 21 10:10 result.tar.gz
2023-03-21 11:10:44 (33832): Guest Log: -rw-r--r--. 1 atlas atlas    11037 Mar 21 10:10 runtime_log.err
2023-03-21 11:10:44 (33832): Guest Log: -rw-------. 1 atlas atlas      635 Mar 21 10:10 EqYNDmnamy2n7Olcko1bjSoqABFKDmABFKDm7AsVDmKVGKDmJ1ETjn.diag
2023-03-21 11:10:44 (33832): Guest Log: Looking for outputfile HITS.32413688._000229-2151730-1679387527.pool.root.1
2023-03-21 11:10:44 (33832): Guest Log: HITS file was successfully produced
2023-03-21 11:10:44 (33832): Guest Log: -rw-------. 1 atlas atlas 30047991 Mar 21 10:10 /home/atlas/RunAtlas/HITS.32413688._000229-2151730-1679387527.pool.root.1
2023-03-21 11:10:44 (33832): Guest Log: Successfully finished the ATLAS job!
2023-03-21 11:10:44 (33832): Guest Log: Copying the results back to the shared directory!
2023-03-21 11:10:44 (33832): Guest Log:  *** Contents of shared directory: ***
2023-03-21 11:10:44 (33832): Guest Log: total 456256
2023-03-21 11:10:44 (33832): Guest Log: -rwxrwxrwx. 1 root root 436382292 Mar 21 09:41 ATLAS.root_0
2023-03-21 11:10:44 (33832): Guest Log: -rwxrwxrwx. 1 root root  30047991 Mar 21 10:10 HITS.pool.root.1
2023-03-21 11:10:44 (33832): Guest Log: -rwxrwxrwx. 1 root root      8879 Mar 21 09:41 init_data.xml
2023-03-21 11:10:44 (33832): Guest Log: -rwxrwxrwx. 1 root root    398356 Mar 21 09:20 input.tar.gz
2023-03-21 11:10:44 (33832): Guest Log: -rwxrwxrwx. 1 root root    337920 Mar 21  2023 result.tar.gz
2023-03-21 11:10:44 (33832): Guest Log: -rwxrwxrwx. 1 root root     17355 Mar 21 09:20 start_atlas.sh
2023-03-21 11:10:44 (33832): Guest Log:  *** Success! Shutting down the machine. ***
2023-03-21 11:10:44 (33832): VM Completion File Detected.
2023-03-21 11:10:44 (33832): Powering off VM.
2023-03-21 11:10:44 (33832): Successfully stopped VM.
2023-03-21 11:10:44 (33832): Deregistering VM. (boinc_fc32796814156f95, slot#6)
2023-03-21 11:10:44 (33832): Removing network bandwidth throttle group from VM.
2023-03-21 11:10:44 (33832): Removing VM from VirtualBox.
11:10:50 (33832): called boinc_finish(0)

</stderr_txt>
]]>

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