Stderr output

<core_client_version>7.16.20</core_client_version>
<![CDATA[
<stderr_txt>
2023-03-21 10:28:34 (1348): Detected: vboxwrapper 26206
2023-03-21 10:28:34 (1348): Detected: BOINC client v7.16.20
2023-03-21 10:28:35 (1348): Detected: VirtualBox VboxManage Interface (Version: 6.0.14)
2023-03-21 10:28:36 (1348): Successfully copied 'init_data.xml' to the shared directory.
2023-03-21 10:28:36 (1348): Create VM. (boinc_7b3848693cd85d10, slot#24)
2023-03-21 10:28:37 (1348): Setting Memory Size for VM. (4600MB)
2023-03-21 10:28:37 (1348): Setting CPU Count for VM. (6)
2023-03-21 10:28:37 (1348): Setting Chipset Options for VM.
2023-03-21 10:28:37 (1348): Setting Graphics Controller Options for VM.
2023-03-21 10:28:38 (1348): Setting Boot Options for VM.
2023-03-21 10:28:38 (1348): Setting Network Configuration for NAT.
2023-03-21 10:28:38 (1348): Enabling VM Network Access.
2023-03-21 10:28:39 (1348): Disabling USB Support for VM.
2023-03-21 10:28:39 (1348): Disabling COM Port Support for VM.
2023-03-21 10:28:39 (1348): Disabling LPT Port Support for VM.
2023-03-21 10:28:39 (1348): Disabling Audio Support for VM.
2023-03-21 10:28:40 (1348): Disabling Clipboard Support for VM.
2023-03-21 10:28:40 (1348): Disabling Drag and Drop Support for VM.
2023-03-21 10:28:40 (1348): Adding storage controller(s) to VM.
2023-03-21 10:28:40 (1348): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2023-03-21 10:28:42 (1348): Adding VirtualBox Guest Additions to VM.
2023-03-21 10:28:42 (1348): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2023-03-21 10:28:42 (1348): forwarding host port 56341 to guest port 80
2023-03-21 10:28:42 (1348): Enabling remote desktop for VM.
2023-03-21 10:28:43 (1348): Enabling shared directory for VM.
2023-03-21 10:28:43 (1348): Starting VM using VBoxManage interface. (boinc_7b3848693cd85d10, slot#24)
2023-03-21 10:28:48 (1348): Successfully started VM. (PID = '9564')
2023-03-21 10:28:48 (1348): Reporting VM Process ID to BOINC.
2023-03-21 10:28:48 (1348): Guest Log: BIOS: VirtualBox 6.0.14
2023-03-21 10:28:48 (1348): Guest Log: CPUID EDX: 0x178bfbff
2023-03-21 10:28:48 (1348): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2023-03-21 10:28:48 (1348): VM state change detected. (old = 'poweredoff', new = 'running')
2023-03-21 10:28:48 (1348): Detected: Web Application Enabled (http://localhost:56341)
2023-03-21 10:28:48 (1348): Detected: Remote Desktop Enabled (localhost:56342)
2023-03-21 10:28:48 (1348): Preference change detected
2023-03-21 10:28:48 (1348): Setting CPU throttle for VM. (100%)
2023-03-21 10:28:48 (1348): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 600 seconds) or (Vbox_job.xml: 900 seconds))
2023-03-21 10:28:50 (1348): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2023-03-21 10:28:50 (1348): Guest Log: BIOS: Booting from Hard Disk...
2023-03-21 10:28:53 (1348): Guest Log: BIOS: KBD: unsupported int 16h function 03
2023-03-21 10:28:53 (1348): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2023-03-21 10:28:53 (1348): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2023-03-21 10:28:53 (1348): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2023-03-21 10:28:53 (1348): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2023-03-21 10:28:53 (1348): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2023-03-21 10:28:53 (1348): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2023-03-21 10:28:53 (1348): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2023-03-21 10:28:53 (1348): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2023-03-21 10:28:53 (1348): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2023-03-21 10:28:53 (1348): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2023-03-21 10:28:53 (1348): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2023-03-21 10:28:53 (1348): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2023-03-21 10:28:53 (1348): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2023-03-21 10:28:53 (1348): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2023-03-21 10:28:53 (1348): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2023-03-21 10:28:53 (1348): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2023-03-21 10:28:53 (1348): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2023-03-21 10:28:53 (1348): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2023-03-21 10:28:53 (1348): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2023-03-21 10:28:53 (1348): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2023-03-21 10:28:53 (1348): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2023-03-21 10:28:53 (1348): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2023-03-21 10:28:53 (1348): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2023-03-21 10:28:53 (1348): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2023-03-21 10:28:53 (1348): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2023-03-21 10:28:53 (1348): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2023-03-21 10:28:53 (1348): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2023-03-21 10:28:53 (1348): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2023-03-21 10:28:53 (1348): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2023-03-21 10:28:53 (1348): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2023-03-21 10:28:53 (1348): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2023-03-21 10:28:59 (1348): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2023-03-21 10:28:59 (1348): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2023-03-21 10:29:04 (1348): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2023-03-21 10:29:04 (1348): Guest Log: 00:00:00.000117 main     Log opened 2023-03-21T10:29:03.075909000Z
2023-03-21 10:29:04 (1348): Guest Log: 00:00:00.000224 main     OS Product: Linux
2023-03-21 10:29:04 (1348): Guest Log: 00:00:00.000250 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2023-03-21 10:29:04 (1348): Guest Log: 00:00:00.000271 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2023-03-21 10:29:04 (1348): Guest Log: 00:00:00.000291 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2023-03-21 10:29:04 (1348): Guest Log: 00:00:00.000291 main     Process ID: 1350
2023-03-21 10:29:04 (1348): Guest Log: 00:00:00.000291 main     Package type: LINUX_64BITS_GENERIC
2023-03-21 10:29:04 (1348): Guest Log: 00:00:00.001016 main     5.2.32 r132073 started. Verbose level = 0
2023-03-21 10:29:04 (1348): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2023-03-21 10:29:04 (1348): Guest Log: [INFO] Mounting shared directory
2023-03-21 10:29:05 (1348): Guest Log: [INFO] Checking for init_data.xml
2023-03-21 10:29:09 (1348): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2023-03-21 10:29:09 (1348): Guest Log: [INFO] Detected branch: dev
2023-03-21 10:29:09 (1348): Guest Log: This is the dev version of the ATLAS job wrapper
2023-03-21 10:29:09 (1348): Guest Log: Copying input files
2023-03-21 10:29:12 (1348): Guest Log: Copied input files into RunAtlas.
2023-03-21 10:29:12 (1348): Guest Log: This VM did not configure a local http proxy via BOINC.
2023-03-21 10:29:12 (1348): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2023-03-21 10:29:12 (1348): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2023-03-21 10:29:12 (1348): Guest Log: Further information can be found at the LHC@home message board.
2023-03-21 10:29:14 (1348): Guest Log: 00:00:10.004184 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 589 186 180 000ns (GuestNow=1 679 390 953 891 871 000 ns GuestLast=1 679 394 543 078 051 000 ns fSetTimeLastLoop=true )
2023-03-21 10:29:20 (1348): Guest Log: Running cvmfs_config stat atlas.cern.ch
2023-03-21 10:29:20 (1348): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2023-03-21 10:29:20 (1348): Guest Log: 2.6.3.0 1626 0 32220 116996 4 1 3116360 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2023-03-21 10:29:21 (1348): Guest Log: copied the webapp to /var/www
2023-03-21 10:29:21 (1348): Guest Log: ATHENA_PROC_NUMBER=6
2023-03-21 10:29:21 (1348): Guest Log: ATHENA_CORE_NUMBER=6
2023-03-21 10:29:21 (1348): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2023-03-21 10:29:22 (1348): Guest Log:  *** Starting ATLAS job. (PandaID=5753961892 taskID=32413688) ***
2023-03-21 11:04:33 (1348): Guest Log:  *** Job finished ***
2023-03-21 11:04:33 (1348): Guest Log:  *** The last 20 lines of the pilot log: ***
2023-03-21 11:04:33 (1348): Guest Log: 2023-03-21 10:03:59,797 | INFO     | [job] queue monitor thread has finished
2023-03-21 11:04:33 (1348): Guest Log: 2023-03-21 10:04:00,873 | INFO     | [data] queue_monitor thread has finished
2023-03-21 11:04:33 (1348): Guest Log: 2023-03-21 10:04:08,704 | INFO     | job.realtimelogging is not enabled
2023-03-21 11:04:33 (1348): Guest Log: 2023-03-21 10:04:08,704 | INFO     | [payload] run_realtimelog thread has finished
2023-03-21 11:04:33 (1348): Guest Log: 2023-03-21 10:04:31,185 | WARNING  | no jobs in monitored_payloads queue (waited for 62 s)
2023-03-21 11:04:33 (1348): Guest Log: 2023-03-21 10:04:31,185 | INFO     | [job] job monitor thread has finished
2023-03-21 11:04:33 (1348): Guest Log: 2023-03-21 10:04:31,317 | INFO     | end of generic workflow (traces error code: 0)
2023-03-21 11:04:33 (1348): Guest Log: 2023-03-21 10:04:31,317 | INFO     | traces error code: 0
2023-03-21 11:04:33 (1348): Guest Log: 2023-03-21 10:04:31,317 | INFO     | pilot has finished
2023-03-21 11:04:33 (1348): Guest Log: 2023-03-21 10:04:31,375 [wrapper] ==== pilot stdout END ====
2023-03-21 11:04:33 (1348): Guest Log: 2023-03-21 10:04:31,380 [wrapper] ==== wrapper stdout RESUME ====
2023-03-21 11:04:33 (1348): Guest Log: 2023-03-21 10:04:31,385 [wrapper] pilotpid: 5445
2023-03-21 11:04:33 (1348): Guest Log: 2023-03-21 10:04:31,391 [wrapper] Pilot exit status: 0
2023-03-21 11:04:33 (1348): Guest Log: 2023-03-21 10:04:31,945 [wrapper] pandaids: 5753961892
2023-03-21 11:04:33 (1348): Guest Log: 2023-03-21 10:04:31,956 [wrapper] apfmon messages muted
2023-03-21 11:04:33 (1348): Guest Log: 2023-03-21 10:04:31,962 [wrapper] Test setup, not cleaning
2023-03-21 11:04:33 (1348): Guest Log: 2023-03-21 10:04:31,967 [wrapper] ==== wrapper stdout END ====
2023-03-21 11:04:33 (1348): Guest Log: 2023-03-21 10:04:31,972 [wrapper] ==== wrapper stderr END ====
2023-03-21 11:04:33 (1348): Guest Log: 2023-03-21 10:04:31,981 [wrapper] wrapperexiting ec=0, duration=2108
2023-03-21 11:04:33 (1348): Guest Log: 2023-03-21 10:04:31,986 [wrapper] apfmon messages muted
2023-03-21 11:04:33 (1348): Guest Log:  *** Error codes and diagnostics ***
2023-03-21 11:04:33 (1348): Guest Log:     "exeErrorCode": 0,
2023-03-21 11:04:33 (1348): Guest Log:     "exeErrorDiag": "",
2023-03-21 11:04:33 (1348): Guest Log:     "pilotErrorCode": 0,
2023-03-21 11:04:33 (1348): Guest Log:     "pilotErrorDiag": "",
2023-03-21 11:04:33 (1348): Guest Log:  *** Listing of results directory ***
2023-03-21 11:04:33 (1348): Guest Log: total 33292
2023-03-21 11:04:33 (1348): Guest Log: -rw-r--r--. 1 atlas atlas     4336 Mar 21 08:31 queuedata.json
2023-03-21 11:04:33 (1348): Guest Log: -rw-r--r--. 1 atlas atlas   386707 Mar 21 08:31 pilot3.tar.gz
2023-03-21 11:04:33 (1348): Guest Log: -rwx------. 1 atlas atlas    26447 Mar 21 08:32 runpilot2-wrapper.sh
2023-03-21 11:04:33 (1348): Guest Log: -rwxr-xr-x. 1 atlas atlas     9015 Mar 21 09:29 init_data.xml
2023-03-21 11:04:33 (1348): Guest Log: -rwxr-xr-x. 1 atlas atlas    17341 Mar 21 09:29 start_atlas.sh
2023-03-21 11:04:33 (1348): Guest Log: -rwxr-xr-x. 1 atlas atlas   398359 Mar 21 09:29 input.tar.gz
2023-03-21 11:04:33 (1348): Guest Log: lrwxrwxrwx. 1 atlas atlas       20 Mar 21 09:29 EVNT.29838250._000010.pool.root.1 -> /data/./ATLAS.root_0
2023-03-21 11:04:33 (1348): Guest Log: -rw-r--r--. 1 atlas atlas     2552 Mar 21 09:29 pandaJob.out
2023-03-21 11:04:33 (1348): Guest Log: -rw-------. 1 atlas atlas      412 Mar 21 09:29 setup.sh.local
2023-03-21 11:04:33 (1348): Guest Log: -rw-------. 1 atlas atlas   978995 Mar 21 09:30 agis_schedconf.cvmfs.json
2023-03-21 11:04:33 (1348): Guest Log: -rw-------. 1 atlas atlas  1426500 Mar 21 09:30 agis_ddmendpoints.agis.ALL.json
2023-03-21 11:04:33 (1348): Guest Log: drwx------. 4 atlas atlas      245 Mar 21 09:30 pilot3
2023-03-21 11:04:33 (1348): Guest Log: -rw-------. 1 atlas atlas 30050854 Mar 21 10:01 HITS.32413688._000229-2151828-1679387536.pool.root.1
2023-03-21 11:04:33 (1348): Guest Log: -rw-------. 1 atlas atlas     1017 Mar 21 10:01 memory_monitor_summary.json
2023-03-21 11:04:33 (1348): Guest Log: -rw-------. 1 atlas atlas   228302 Mar 21 10:01 log.32413688._000229-2151828-1679387536.job.log.tgz.1
2023-03-21 11:04:33 (1348): Guest Log: -rw-------. 1 atlas atlas     7694 Mar 21 10:03 heartbeat.json
2023-03-21 11:04:33 (1348): Guest Log: -rw-------. 1 atlas atlas     3018 Mar 21 10:04 pilotlog.txt
2023-03-21 11:04:33 (1348): Guest Log: -rw-------. 1 atlas atlas   116568 Mar 21 10:04 log.32413688._000229-2151828-1679387536.job.log.1
2023-03-21 11:04:33 (1348): Guest Log: -rw-------. 1 atlas atlas      402 Mar 21 10:04 output.list
2023-03-21 11:04:33 (1348): Guest Log: -rw-r--r--. 1 atlas atlas      677 Mar 21 10:04 runtime_log
2023-03-21 11:04:33 (1348): Guest Log: -rw-------. 1 atlas atlas   368640 Mar 21 10:04 result.tar.gz
2023-03-21 11:04:33 (1348): Guest Log: -rw-r--r--. 1 atlas atlas    10729 Mar 21 10:04 runtime_log.err
2023-03-21 11:04:33 (1348): Guest Log: -rw-------. 1 atlas atlas      640 Mar 21 10:04 4M7MDmvamy2n7Olcko1bjSoqABFKDmABFKDm7AsVDmPVGKDmzudwln.diag
2023-03-21 11:04:33 (1348): Guest Log: Looking for outputfile HITS.32413688._000229-2151828-1679387536.pool.root.1
2023-03-21 11:04:33 (1348): Guest Log: HITS file was successfully produced
2023-03-21 11:04:33 (1348): Guest Log: -rw-------. 1 atlas atlas 30050854 Mar 21 10:01 /home/atlas/RunAtlas/HITS.32413688._000229-2151828-1679387536.pool.root.1
2023-03-21 11:04:33 (1348): Guest Log: Successfully finished the ATLAS job!
2023-03-21 11:04:33 (1348): Guest Log: Copying the results back to the shared directory!
2023-03-21 11:04:34 (1348): Guest Log:  *** Contents of shared directory: ***
2023-03-21 11:04:34 (1348): Guest Log: total 456288
2023-03-21 11:04:34 (1348): Guest Log: -rwxrwxrwx. 1 root root 436382292 Mar 21 09:28 ATLAS.root_0
2023-03-21 11:04:34 (1348): Guest Log: -rwxrwxrwx. 1 root root  30050854 Mar 21 10:01 HITS.pool.root.1
2023-03-21 11:04:34 (1348): Guest Log: -rwxrwxrwx. 1 root root      9015 Mar 21 09:28 init_data.xml
2023-03-21 11:04:34 (1348): Guest Log: -rwxrwxrwx. 1 root root    398359 Mar 21 09:26 input.tar.gz
2023-03-21 11:04:34 (1348): Guest Log: -rwxrwxrwx. 1 root root    368640 Mar 21  2023 result.tar.gz
2023-03-21 11:04:34 (1348): Guest Log: -rwxrwxrwx. 1 root root     17341 Mar 21 09:26 start_atlas.sh
2023-03-21 11:04:34 (1348): Guest Log:  *** Success! Shutting down the machine. ***
2023-03-21 11:04:34 (1348): VM Completion File Detected.
2023-03-21 11:04:34 (1348): Powering off VM.
2023-03-21 11:04:34 (1348): Successfully stopped VM.
2023-03-21 11:04:34 (1348): Deregistering VM. (boinc_7b3848693cd85d10, slot#24)
2023-03-21 11:04:34 (1348): Removing network bandwidth throttle group from VM.
2023-03-21 11:04:35 (1348): Removing VM from VirtualBox.
11:04:40 (1348): called boinc_finish(0)

</stderr_txt>
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