Stderr output

<core_client_version>7.16.20</core_client_version>
<![CDATA[
<stderr_txt>
2023-03-22 15:13:47 (19788): Detected: vboxwrapper 26206
2023-03-22 15:13:47 (19788): Detected: BOINC client v7.16.20
2023-03-22 15:13:48 (19788): Detected: VirtualBox VboxManage Interface (Version: 6.0.14)
2023-03-22 15:13:48 (19788): Successfully copied 'init_data.xml' to the shared directory.
2023-03-22 15:13:49 (19788): Create VM. (boinc_a2b1c5c77977195a, slot#16)
2023-03-22 15:13:49 (19788): Setting Memory Size for VM. (4600MB)
2023-03-22 15:13:50 (19788): Setting CPU Count for VM. (6)
2023-03-22 15:13:50 (19788): Setting Chipset Options for VM.
2023-03-22 15:13:50 (19788): Setting Graphics Controller Options for VM.
2023-03-22 15:13:51 (19788): Setting Boot Options for VM.
2023-03-22 15:13:51 (19788): Setting Network Configuration for NAT.
2023-03-22 15:13:51 (19788): Enabling VM Network Access.
2023-03-22 15:13:51 (19788): Disabling USB Support for VM.
2023-03-22 15:13:52 (19788): Disabling COM Port Support for VM.
2023-03-22 15:13:52 (19788): Disabling LPT Port Support for VM.
2023-03-22 15:13:52 (19788): Disabling Audio Support for VM.
2023-03-22 15:13:52 (19788): Disabling Clipboard Support for VM.
2023-03-22 15:13:53 (19788): Disabling Drag and Drop Support for VM.
2023-03-22 15:13:53 (19788): Adding storage controller(s) to VM.
2023-03-22 15:13:53 (19788): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2023-03-22 15:13:54 (19788): Adding VirtualBox Guest Additions to VM.
2023-03-22 15:13:55 (19788): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2023-03-22 15:13:55 (19788): forwarding host port 54242 to guest port 80
2023-03-22 15:13:55 (19788): Enabling remote desktop for VM.
2023-03-22 15:13:56 (19788): Enabling shared directory for VM.
2023-03-22 15:13:56 (19788): Starting VM using VBoxManage interface. (boinc_a2b1c5c77977195a, slot#16)
2023-03-22 15:14:00 (19788): Successfully started VM. (PID = '20136')
2023-03-22 15:14:00 (19788): Reporting VM Process ID to BOINC.
2023-03-22 15:14:00 (19788): Guest Log: BIOS: VirtualBox 6.0.14
2023-03-22 15:14:00 (19788): Guest Log: CPUID EDX: 0x178bfbff
2023-03-22 15:14:00 (19788): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2023-03-22 15:14:00 (19788): VM state change detected. (old = 'poweredoff', new = 'running')
2023-03-22 15:14:00 (19788): Detected: Web Application Enabled (http://localhost:54242)
2023-03-22 15:14:00 (19788): Detected: Remote Desktop Enabled (localhost:54243)
2023-03-22 15:14:00 (19788): Preference change detected
2023-03-22 15:14:00 (19788): Setting CPU throttle for VM. (100%)
2023-03-22 15:14:01 (19788): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 600 seconds) or (Vbox_job.xml: 900 seconds))
2023-03-22 15:14:03 (19788): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2023-03-22 15:14:03 (19788): Guest Log: BIOS: Booting from Hard Disk...
2023-03-22 15:14:05 (19788): Guest Log: BIOS: KBD: unsupported int 16h function 03
2023-03-22 15:14:05 (19788): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2023-03-22 15:14:05 (19788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2023-03-22 15:14:05 (19788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2023-03-22 15:14:05 (19788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2023-03-22 15:14:05 (19788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2023-03-22 15:14:06 (19788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2023-03-22 15:14:06 (19788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2023-03-22 15:14:06 (19788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2023-03-22 15:14:06 (19788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2023-03-22 15:14:06 (19788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2023-03-22 15:14:06 (19788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2023-03-22 15:14:06 (19788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2023-03-22 15:14:06 (19788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2023-03-22 15:14:06 (19788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2023-03-22 15:14:06 (19788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2023-03-22 15:14:06 (19788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2023-03-22 15:14:06 (19788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2023-03-22 15:14:06 (19788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2023-03-22 15:14:06 (19788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2023-03-22 15:14:06 (19788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2023-03-22 15:14:06 (19788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2023-03-22 15:14:06 (19788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2023-03-22 15:14:06 (19788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2023-03-22 15:14:06 (19788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2023-03-22 15:14:06 (19788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2023-03-22 15:14:06 (19788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2023-03-22 15:14:06 (19788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2023-03-22 15:14:06 (19788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2023-03-22 15:14:06 (19788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2023-03-22 15:14:06 (19788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2023-03-22 15:14:06 (19788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2023-03-22 15:14:12 (19788): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2023-03-22 15:14:12 (19788): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2023-03-22 15:14:17 (19788): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2023-03-22 15:14:17 (19788): Guest Log: 00:00:00.000147 main     Log opened 2023-03-22T15:14:14.952594000Z
2023-03-22 15:14:17 (19788): Guest Log: 00:00:00.000363 main     OS Product: Linux
2023-03-22 15:14:17 (19788): Guest Log: 00:00:00.000408 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2023-03-22 15:14:17 (19788): Guest Log: 00:00:00.000434 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2023-03-22 15:14:17 (19788): Guest Log: 00:00:00.000459 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2023-03-22 15:14:17 (19788): Guest Log: 00:00:00.000459 main     Process ID: 1332
2023-03-22 15:14:17 (19788): Guest Log: 00:00:00.000460 main     Package type: LINUX_64BITS_GENERIC
2023-03-22 15:14:17 (19788): Guest Log: 00:00:00.001303 main     5.2.32 r132073 started. Verbose level = 0
2023-03-22 15:14:17 (19788): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2023-03-22 15:14:17 (19788): Guest Log: [INFO] Mounting shared directory
2023-03-22 15:14:17 (19788): Guest Log: [INFO] Checking for init_data.xml
2023-03-22 15:14:20 (19788): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2023-03-22 15:14:20 (19788): Guest Log: [INFO] Detected branch: dev
2023-03-22 15:14:20 (19788): Guest Log: This is the dev version of the ATLAS job wrapper
2023-03-22 15:14:20 (19788): Guest Log: Copying input files
2023-03-22 15:14:23 (19788): Guest Log: Copied input files into RunAtlas.
2023-03-22 15:14:23 (19788): Guest Log: This VM did not configure a local http proxy via BOINC.
2023-03-22 15:14:23 (19788): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2023-03-22 15:14:23 (19788): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2023-03-22 15:14:23 (19788): Guest Log: Further information can be found at the LHC@home message board.
2023-03-22 15:14:27 (19788): Guest Log: 00:00:10.003567 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 221 903 000ns (GuestNow=1 679 494 466 733 032 000 ns GuestLast=1 679 498 054 954 935 000 ns fSetTimeLastLoop=true )
2023-03-22 15:14:34 (19788): Guest Log: Running cvmfs_config stat atlas.cern.ch
2023-03-22 15:14:34 (19788): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2023-03-22 15:14:34 (19788): Guest Log: 2.6.3.0 1607 0 30024 117044 4 1 3116365 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2023-03-22 15:14:35 (19788): Guest Log: copied the webapp to /var/www
2023-03-22 15:14:35 (19788): Guest Log: ATHENA_PROC_NUMBER=6
2023-03-22 15:14:35 (19788): Guest Log: ATHENA_CORE_NUMBER=6
2023-03-22 15:14:35 (19788): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2023-03-22 15:14:35 (19788): Guest Log:  *** Starting ATLAS job. (PandaID=5753961892 taskID=32413688) ***
2023-03-22 16:19:12 (19788): Guest Log:  *** Job finished ***
2023-03-22 16:19:12 (19788): Guest Log:  *** The last 20 lines of the pilot log: ***
2023-03-22 16:19:12 (19788): Guest Log: 2023-03-22 15:18:34,871 | INFO     | [data] copytool_out thread has finished
2023-03-22 16:19:12 (19788): Guest Log: 2023-03-22 15:18:35,860 | INFO     | [data] queue_monitor thread has finished
2023-03-22 16:19:12 (19788): Guest Log: 2023-03-22 15:18:46,409 | INFO     | job.realtimelogging is not enabled
2023-03-22 16:19:12 (19788): Guest Log: 2023-03-22 15:18:46,409 | INFO     | [payload] run_realtimelog thread has finished
2023-03-22 16:19:12 (19788): Guest Log: 2023-03-22 15:19:10,191 | WARNING  | no jobs in monitored_payloads queue (waited for 62 s)
2023-03-22 16:19:12 (19788): Guest Log: 2023-03-22 15:19:10,191 | INFO     | [job] job monitor thread has finished
2023-03-22 16:19:12 (19788): Guest Log: 2023-03-22 15:19:10,256 | INFO     | end of generic workflow (traces error code: 0)
2023-03-22 16:19:12 (19788): Guest Log: 2023-03-22 15:19:10,256 | INFO     | traces error code: 0
2023-03-22 16:19:12 (19788): Guest Log: 2023-03-22 15:19:10,256 | INFO     | pilot has finished
2023-03-22 16:19:12 (19788): Guest Log: 2023-03-22 15:19:10,314 [wrapper] ==== pilot stdout END ====
2023-03-22 16:19:12 (19788): Guest Log: 2023-03-22 15:19:10,319 [wrapper] ==== wrapper stdout RESUME ====
2023-03-22 16:19:12 (19788): Guest Log: 2023-03-22 15:19:10,323 [wrapper] pilotpid: 5468
2023-03-22 16:19:12 (19788): Guest Log: 2023-03-22 15:19:10,328 [wrapper] Pilot exit status: 0
2023-03-22 16:19:12 (19788): Guest Log: 2023-03-22 15:19:11,240 [wrapper] pandaids: 5753961892
2023-03-22 16:19:12 (19788): Guest Log: 2023-03-22 15:19:11,251 [wrapper] apfmon messages muted
2023-03-22 16:19:12 (19788): Guest Log: 2023-03-22 15:19:11,256 [wrapper] Test setup, not cleaning
2023-03-22 16:19:12 (19788): Guest Log: 2023-03-22 15:19:11,260 [wrapper] ==== wrapper stdout END ====
2023-03-22 16:19:12 (19788): Guest Log: 2023-03-22 15:19:11,265 [wrapper] ==== wrapper stderr END ====
2023-03-22 16:19:12 (19788): Guest Log: 2023-03-22 15:19:11,278 [wrapper] wrapperexiting ec=0, duration=3874
2023-03-22 16:19:12 (19788): Guest Log: 2023-03-22 15:19:11,283 [wrapper] apfmon messages muted
2023-03-22 16:19:12 (19788): Guest Log:  *** Error codes and diagnostics ***
2023-03-22 16:19:12 (19788): Guest Log:     "exeErrorCode": 65,
2023-03-22 16:19:12 (19788): Guest Log:     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
2023-03-22 16:19:12 (19788): Guest Log:     "pilotErrorCode": 1305,
2023-03-22 16:19:12 (19788): Guest Log:     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute 2023-03-22 15:16:57,598 CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
2023-03-22 16:19:12 (19788): Guest Log:  *** Listing of results directory ***
2023-03-22 16:19:12 (19788): Guest Log: total 3712
2023-03-22 16:19:12 (19788): Guest Log: -rw-r--r--. 1 atlas atlas  386707 Mar 22 10:25 pilot3.tar.gz
2023-03-22 16:19:12 (19788): Guest Log: -rw-r--r--. 1 atlas atlas    4336 Mar 22 11:02 queuedata.json
2023-03-22 16:19:12 (19788): Guest Log: -rwx------. 1 atlas atlas   27542 Mar 22 11:04 runpilot2-wrapper.sh
2023-03-22 16:19:12 (19788): Guest Log: -rwxr-xr-x. 1 atlas atlas   17707 Mar 22 14:14 start_atlas.sh
2023-03-22 16:19:12 (19788): Guest Log: -rwxr-xr-x. 1 atlas atlas  398717 Mar 22 14:14 input.tar.gz
2023-03-22 16:19:12 (19788): Guest Log: -rwxr-xr-x. 1 atlas atlas    9035 Mar 22 14:14 init_data.xml
2023-03-22 16:19:12 (19788): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Mar 22 14:14 EVNT.29838250._000010.pool.root.1 -> /data/./ATLAS.root_0
2023-03-22 16:19:12 (19788): Guest Log: -rw-r--r--. 1 atlas atlas    2553 Mar 22 14:14 pandaJob.out
2023-03-22 16:19:12 (19788): Guest Log: -rw-------. 1 atlas atlas     284 Mar 22 14:14 setup.sh.local
2023-03-22 16:19:12 (19788): Guest Log: -rw-------. 1 atlas atlas  982146 Mar 22 14:15 agis_schedconf.cvmfs.json
2023-03-22 16:19:12 (19788): Guest Log: -rw-------. 1 atlas atlas 1426500 Mar 22 14:15 agis_ddmendpoints.agis.ALL.json
2023-03-22 16:19:12 (19788): Guest Log: drwx------. 4 atlas atlas     245 Mar 22 14:15 pilot3
2023-03-22 16:19:12 (19788): Guest Log: -rw-------. 1 atlas atlas     991 Mar 22 15:17 memory_monitor_summary.json
2023-03-22 16:19:12 (19788): Guest Log: -rw-------. 1 atlas atlas   34853 Mar 22 15:17 log.32413688._000229-2538993-1679483094.job.log.tgz.1
2023-03-22 16:19:12 (19788): Guest Log: -rw-------. 1 atlas atlas    8525 Mar 22 15:18 heartbeat.json
2023-03-22 16:19:12 (19788): Guest Log: -rw-------. 1 atlas atlas    2926 Mar 22 15:19 pilotlog.txt
2023-03-22 16:19:12 (19788): Guest Log: -rw-------. 1 atlas atlas  191633 Mar 22 15:19 log.32413688._000229-2538993-1679483094.job.log.1
2023-03-22 16:19:12 (19788): Guest Log: -rw-------. 1 atlas atlas     220 Mar 22 15:19 output.list
2023-03-22 16:19:12 (19788): Guest Log: -rw-r--r--. 1 atlas atlas     677 Mar 22 15:19 runtime_log
2023-03-22 16:19:12 (19788): Guest Log: -rw-------. 1 atlas atlas  245760 Mar 22 15:19 result.tar.gz
2023-03-22 16:19:12 (19788): Guest Log: -rw-r--r--. 1 atlas atlas   10928 Mar 22 15:19 runtime_log.err
2023-03-22 16:19:12 (19788): Guest Log: -rw-------. 1 atlas atlas     634 Mar 22 15:19 cEFKDmCSBz2n7Olcko1bjSoqABFKDmABFKDm7AsVDm0XGKDm3u7epn.diag
2023-03-22 16:19:12 (19788): Guest Log: Looking for outputfile HITS.32413688._000229-2538993-1679483094.pool.root.1
2023-03-22 16:19:12 (19788): Guest Log: No HITS file was produced
2023-03-22 16:19:12 (19788): Guest Log: Successfully finished the ATLAS job!
2023-03-22 16:19:12 (19788): Guest Log: Copying the results back to the shared directory!
2023-03-22 16:19:12 (19788): Guest Log:  *** Contents of shared directory: ***
2023-03-22 16:19:12 (19788): Guest Log: total 426820
2023-03-22 16:19:12 (19788): Guest Log: -rwxrwxrwx. 1 root root 436382292 Mar 22 14:13 ATLAS.root_0
2023-03-22 16:19:12 (19788): Guest Log: -rwxrwxrwx. 1 root root      9035 Mar 22 14:13 init_data.xml
2023-03-22 16:19:12 (19788): Guest Log: -rwxrwxrwx. 1 root root    398717 Mar 22 13:39 input.tar.gz
2023-03-22 16:19:12 (19788): Guest Log: -rwxrwxrwx. 1 root root    245760 Mar 22 15:19 result.tar.gz
2023-03-22 16:19:12 (19788): Guest Log: -rwxrwxrwx. 1 root root     17707 Mar 22 13:39 start_atlas.sh
2023-03-22 16:19:12 (19788): Guest Log:  *** Success! Shutting down the machine. ***
2023-03-22 16:19:12 (19788): VM Completion File Detected.
2023-03-22 16:19:12 (19788): Powering off VM.
2023-03-22 16:19:13 (19788): Successfully stopped VM.
2023-03-22 16:19:13 (19788): Deregistering VM. (boinc_a2b1c5c77977195a, slot#16)
2023-03-22 16:19:13 (19788): Removing network bandwidth throttle group from VM.
2023-03-22 16:19:13 (19788): Removing VM from VirtualBox.
16:19:19 (19788): called boinc_finish(0)

</stderr_txt>
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