Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
2023-03-22 15:24:25 (9920): Detected: vboxwrapper 26206
2023-03-22 15:24:25 (9920): Detected: BOINC client v7.20.2
2023-03-22 15:24:26 (9920): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2023-03-22 15:24:26 (9920): Successfully copied 'init_data.xml' to the shared directory.
2023-03-22 15:24:27 (9920): Create VM. (boinc_df18f034d891b401, slot#4)
2023-03-22 15:24:28 (9920): Setting Memory Size for VM. (3500MB)
2023-03-22 15:24:28 (9920): Setting CPU Count for VM. (4)
2023-03-22 15:24:28 (9920): Setting Chipset Options for VM.
2023-03-22 15:24:28 (9920): Setting Graphics Controller Options for VM.
2023-03-22 15:24:29 (9920): Setting Boot Options for VM.
2023-03-22 15:24:29 (9920): Setting Network Configuration for NAT.
2023-03-22 15:24:29 (9920): Enabling VM Network Access.
2023-03-22 15:24:30 (9920): Disabling USB Support for VM.
2023-03-22 15:24:30 (9920): Disabling COM Port Support for VM.
2023-03-22 15:24:30 (9920): Disabling LPT Port Support for VM.
2023-03-22 15:24:30 (9920): Disabling Audio Support for VM.
2023-03-22 15:24:31 (9920): Disabling Clipboard Support for VM.
2023-03-22 15:24:31 (9920): Disabling Drag and Drop Support for VM.
2023-03-22 15:24:31 (9920): Adding storage controller(s) to VM.
2023-03-22 15:24:32 (9920): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2023-03-22 15:24:34 (9920): Adding VirtualBox Guest Additions to VM.
2023-03-22 15:24:35 (9920): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2023-03-22 15:24:35 (9920): forwarding host port 51428 to guest port 80
2023-03-22 15:24:35 (9920): Enabling remote desktop for VM.
2023-03-22 15:24:36 (9920): Enabling shared directory for VM.
2023-03-22 15:24:37 (9920): Starting VM using VBoxManage interface. (boinc_df18f034d891b401, slot#4)
2023-03-22 15:24:47 (9920): Successfully started VM. (PID = '11784')
2023-03-22 15:24:47 (9920): Reporting VM Process ID to BOINC.
2023-03-22 15:24:47 (9920): Guest Log: BIOS: VirtualBox 7.0.6
2023-03-22 15:24:47 (9920): Guest Log: CPUID EDX: 0x178bfbff
2023-03-22 15:24:47 (9920): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2023-03-22 15:24:47 (9920): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2023-03-22 15:24:47 (9920): VM state change detected. (old = 'poweredoff', new = 'running')
2023-03-22 15:24:47 (9920): Detected: Web Application Enabled (http://localhost:51428)
2023-03-22 15:24:47 (9920): Detected: Remote Desktop Enabled (localhost:51429)
2023-03-22 15:24:47 (9920): Preference change detected
2023-03-22 15:24:47 (9920): Setting CPU throttle for VM. (100%)
2023-03-22 15:24:47 (9920): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 120 seconds) or (Vbox_job.xml: 900 seconds))
2023-03-22 15:24:49 (9920): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2023-03-22 15:24:49 (9920): Guest Log: BIOS: Booting from Hard Disk...
2023-03-22 15:24:52 (9920): Guest Log: BIOS: KBD: unsupported int 16h function 03
2023-03-22 15:24:52 (9920): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2023-03-22 15:24:52 (9920): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2023-03-22 15:24:52 (9920): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2023-03-22 15:24:52 (9920): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2023-03-22 15:24:52 (9920): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2023-03-22 15:24:52 (9920): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2023-03-22 15:24:52 (9920): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2023-03-22 15:24:52 (9920): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2023-03-22 15:24:52 (9920): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2023-03-22 15:24:52 (9920): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2023-03-22 15:24:52 (9920): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2023-03-22 15:24:52 (9920): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2023-03-22 15:24:52 (9920): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2023-03-22 15:24:52 (9920): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2023-03-22 15:24:52 (9920): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2023-03-22 15:24:52 (9920): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2023-03-22 15:24:52 (9920): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2023-03-22 15:24:52 (9920): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2023-03-22 15:24:52 (9920): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2023-03-22 15:24:52 (9920): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2023-03-22 15:24:52 (9920): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2023-03-22 15:24:52 (9920): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2023-03-22 15:24:52 (9920): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2023-03-22 15:24:52 (9920): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2023-03-22 15:24:52 (9920): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2023-03-22 15:24:52 (9920): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2023-03-22 15:24:52 (9920): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2023-03-22 15:24:52 (9920): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2023-03-22 15:24:52 (9920): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2023-03-22 15:24:52 (9920): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2023-03-22 15:24:52 (9920): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2023-03-22 15:25:00 (9920): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2023-03-22 15:25:00 (9920): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2023-03-22 15:25:10 (9920): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2023-03-22 15:25:10 (9920): Guest Log: 00:00:00.000279 main     Log opened 2023-03-22T14:25:09.243220000Z
2023-03-22 15:25:10 (9920): Guest Log: 00:00:00.000424 main     OS Product: Linux
2023-03-22 15:25:10 (9920): Guest Log: 00:00:00.000482 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2023-03-22 15:25:10 (9920): Guest Log: 00:00:00.000539 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2023-03-22 15:25:10 (9920): Guest Log: 00:00:00.000582 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2023-03-22 15:25:10 (9920): Guest Log: 00:00:00.000583 main     Process ID: 1274
2023-03-22 15:25:10 (9920): Guest Log: 00:00:00.000584 main     Package type: LINUX_64BITS_GENERIC
2023-03-22 15:25:10 (9920): Guest Log: 00:00:00.002519 main     5.2.32 r132073 started. Verbose level = 0
2023-03-22 15:25:10 (9920): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2023-03-22 15:25:10 (9920): Guest Log: [INFO] Mounting shared directory
2023-03-22 15:25:10 (9920): Guest Log: [INFO] Checking for init_data.xml
2023-03-22 15:25:15 (9920): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2023-03-22 15:25:15 (9920): Guest Log: [INFO] Detected branch: dev
2023-03-22 15:25:15 (9920): Guest Log: This is the dev version of the ATLAS job wrapper
2023-03-22 15:25:15 (9920): Guest Log: Copying input files
2023-03-22 15:25:24 (9920): Guest Log: Copied input files into RunAtlas.
2023-03-22 15:25:24 (9920): Guest Log: This VM did not configure a local http proxy via BOINC.
2023-03-22 15:25:24 (9920): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2023-03-22 15:25:24 (9920): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2023-03-22 15:25:24 (9920): Guest Log: Further information can be found at the LHC@home message board.
2023-03-22 15:25:37 (9920): Guest Log: Running cvmfs_config stat atlas.cern.ch
2023-03-22 15:25:38 (9920): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2023-03-22 15:25:38 (9920): Guest Log: 2.6.3.0 1550 0 30172 117045 4 1 3116365 4096000 0 65024 0 0 n/a 1 1 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2023-03-22 15:25:40 (9920): Guest Log: copied the webapp to /var/www
2023-03-22 15:25:40 (9920): Guest Log: ATHENA_PROC_NUMBER=4
2023-03-22 15:25:40 (9920): Guest Log: ATHENA_CORE_NUMBER=4
2023-03-22 15:25:41 (9920): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2023-03-22 15:25:41 (9920): Guest Log:  *** Starting ATLAS job. (PandaID=5753961892 taskID=32413688) ***
2023-03-22 15:46:03 (9920): Preference change detected
2023-03-22 15:46:03 (9920): Setting CPU throttle for VM. (100%)
2023-03-22 15:46:03 (9920): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 120 seconds) or (Vbox_job.xml: 900 seconds))
2023-03-22 16:03:47 (9920): Preference change detected
2023-03-22 16:03:47 (9920): Setting CPU throttle for VM. (100%)
2023-03-22 16:03:47 (9920): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 120 seconds) or (Vbox_job.xml: 900 seconds))
2023-03-22 16:30:30 (9920): Guest Log:  *** Job finished ***
2023-03-22 16:30:30 (9920): Guest Log:  *** The last 20 lines of the pilot log: ***
2023-03-22 16:30:30 (9920): Guest Log: 2023-03-22 15:30:20,129 | INFO     | [data] copytool_out thread has finished
2023-03-22 16:30:30 (9920): Guest Log: 2023-03-22 15:30:21,132 | WARNING  | no jobs in monitored_payloads queue (waited for 62 s)
2023-03-22 16:30:30 (9920): Guest Log: 2023-03-22 15:30:21,132 | INFO     | [job] job monitor thread has finished
2023-03-22 16:30:30 (9920): Guest Log: 2023-03-22 15:30:21,606 | INFO     | [data] queue_monitor thread has finished
2023-03-22 16:30:30 (9920): Guest Log: 2023-03-22 15:30:29,270 | INFO     | job.realtimelogging is not enabled
2023-03-22 16:30:30 (9920): Guest Log: 2023-03-22 15:30:29,270 | INFO     | [payload] run_realtimelog thread has finished
2023-03-22 16:30:30 (9920): Guest Log: 2023-03-22 15:30:29,373 | INFO     | end of generic workflow (traces error code: 0)
2023-03-22 16:30:30 (9920): Guest Log: 2023-03-22 15:30:29,373 | INFO     | traces error code: 0
2023-03-22 16:30:30 (9920): Guest Log: 2023-03-22 15:30:29,374 | INFO     | pilot has finished
2023-03-22 16:30:30 (9920): Guest Log: 2023-03-22 15:30:29,466 [wrapper] ==== pilot stdout END ====
2023-03-22 16:30:30 (9920): Guest Log: 2023-03-22 15:30:29,475 [wrapper] ==== wrapper stdout RESUME ====
2023-03-22 16:30:30 (9920): Guest Log: 2023-03-22 15:30:29,482 [wrapper] pilotpid: 5396
2023-03-22 16:30:30 (9920): Guest Log: 2023-03-22 15:30:29,490 [wrapper] Pilot exit status: 0
2023-03-22 16:30:30 (9920): Guest Log: 2023-03-22 15:30:29,635 [wrapper] pandaids: 5753961892
2023-03-22 16:30:30 (9920): Guest Log: 2023-03-22 15:30:29,652 [wrapper] apfmon messages muted
2023-03-22 16:30:30 (9920): Guest Log: 2023-03-22 15:30:29,660 [wrapper] Test setup, not cleaning
2023-03-22 16:30:30 (9920): Guest Log: 2023-03-22 15:30:29,668 [wrapper] ==== wrapper stdout END ====
2023-03-22 16:30:30 (9920): Guest Log: 2023-03-22 15:30:29,676 [wrapper] ==== wrapper stderr END ====
2023-03-22 16:30:30 (9920): Guest Log: 2023-03-22 15:30:29,692 [wrapper] wrapperexiting ec=0, duration=3886
2023-03-22 16:30:30 (9920): Guest Log: 2023-03-22 15:30:29,702 [wrapper] apfmon messages muted
2023-03-22 16:30:30 (9920): Guest Log:  *** Error codes and diagnostics ***
2023-03-22 16:30:30 (9920): Guest Log:     "exeErrorCode": 65,
2023-03-22 16:30:30 (9920): Guest Log:     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
2023-03-22 16:30:30 (9920): Guest Log:     "pilotErrorCode": 1305,
2023-03-22 16:30:30 (9920): Guest Log:     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute 2023-03-22 15:28:07,524 CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
2023-03-22 16:30:30 (9920): Guest Log:  *** Listing of results directory ***
2023-03-22 16:30:30 (9920): Guest Log: total 3704
2023-03-22 16:30:30 (9920): Guest Log: -rw-r--r--. 1 atlas atlas  386707 Mar 22 10:25 pilot3.tar.gz
2023-03-22 16:30:30 (9920): Guest Log: -rw-r--r--. 1 atlas atlas    4336 Mar 22 11:02 queuedata.json
2023-03-22 16:30:30 (9920): Guest Log: -rwx------. 1 atlas atlas   27542 Mar 22 11:05 runpilot2-wrapper.sh
2023-03-22 16:30:30 (9920): Guest Log: -rwxr-xr-x. 1 atlas atlas    7157 Mar 22 14:25 init_data.xml
2023-03-22 16:30:30 (9920): Guest Log: -rwxr-xr-x. 1 atlas atlas  398717 Mar 22 14:25 input.tar.gz
2023-03-22 16:30:30 (9920): Guest Log: -rwxr-xr-x. 1 atlas atlas   17707 Mar 22 14:25 start_atlas.sh
2023-03-22 16:30:30 (9920): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Mar 22 14:25 EVNT.29838250._000010.pool.root.1 -> /data/./ATLAS.root_0
2023-03-22 16:30:30 (9920): Guest Log: -rw-r--r--. 1 atlas atlas    2553 Mar 22 14:25 pandaJob.out
2023-03-22 16:30:30 (9920): Guest Log: -rw-------. 1 atlas atlas     284 Mar 22 14:25 setup.sh.local
2023-03-22 16:30:30 (9920): Guest Log: -rw-------. 1 atlas atlas  982191 Mar 22 14:26 agis_schedconf.cvmfs.json
2023-03-22 16:30:30 (9920): Guest Log: -rw-------. 1 atlas atlas 1426500 Mar 22 14:26 agis_ddmendpoints.agis.ALL.json
2023-03-22 16:30:30 (9920): Guest Log: drwx------. 4 atlas atlas     245 Mar 22 14:26 pilot3
2023-03-22 16:30:30 (9920): Guest Log: -rw-------. 1 atlas atlas    1006 Mar 22 15:28 memory_monitor_summary.json
2023-03-22 16:30:30 (9920): Guest Log: -rw-------. 1 atlas atlas   35034 Mar 22 15:28 log.32413688._000229-2539254-1679483110.job.log.tgz.1
2023-03-22 16:30:30 (9920): Guest Log: -rw-------. 1 atlas atlas    8546 Mar 22 15:30 heartbeat.json
2023-03-22 16:30:30 (9920): Guest Log: -rw-------. 1 atlas atlas    2926 Mar 22 15:30 pilotlog.txt
2023-03-22 16:30:30 (9920): Guest Log: -rw-------. 1 atlas atlas  188382 Mar 22 15:30 log.32413688._000229-2539254-1679483110.job.log.1
2023-03-22 16:30:30 (9920): Guest Log: -rw-------. 1 atlas atlas     220 Mar 22 15:30 output.list
2023-03-22 16:30:30 (9920): Guest Log: -rw-r--r--. 1 atlas atlas     677 Mar 22 15:30 runtime_log
2023-03-22 16:30:30 (9920): Guest Log: -rw-------. 1 atlas atlas  245760 Mar 22 15:30 result.tar.gz
2023-03-22 16:30:30 (9920): Guest Log: -rw-r--r--. 1 atlas atlas   10919 Mar 22 15:30 runtime_log.err
2023-03-22 16:30:30 (9920): Guest Log: -rw-------. 1 atlas atlas     631 Mar 22 15:30 htqKDmRSBz2n7Olcko1bjSoqABFKDmABFKDm7AsVDmAYGKDmcvPdGm.diag
2023-03-22 16:30:30 (9920): Guest Log: Looking for outputfile HITS.32413688._000229-2539254-1679483110.pool.root.1
2023-03-22 16:30:30 (9920): Guest Log: No HITS file was produced
2023-03-22 16:30:30 (9920): Guest Log: Successfully finished the ATLAS job!
2023-03-22 16:30:30 (9920): Guest Log: Copying the results back to the shared directory!
2023-03-22 16:30:30 (9920): Guest Log:  *** Contents of shared directory: ***
2023-03-22 16:30:31 (9920): Guest Log: total 426816
2023-03-22 16:30:31 (9920): Guest Log: -rwxrwxrwx. 1 root root 436382292 Mar 22 14:24 ATLAS.root_0
2023-03-22 16:30:31 (9920): Guest Log: -rwxrwxrwx. 1 root root      7157 Mar 22 14:24 init_data.xml
2023-03-22 16:30:31 (9920): Guest Log: -rwxrwxrwx. 1 root root    398717 Mar 22 14:24 input.tar.gz
2023-03-22 16:30:31 (9920): Guest Log: -rwxrwxrwx. 1 root root    245760 Mar 22 15:30 result.tar.gz
2023-03-22 16:30:31 (9920): Guest Log: -rwxrwxrwx. 1 root root     17707 Mar 22 14:24 start_atlas.sh
2023-03-22 16:30:31 (9920): Guest Log:  *** Success! Shutting down the machine. ***
2023-03-22 16:30:31 (9920): VM Completion File Detected.
2023-03-22 16:30:31 (9920): Powering off VM.
2023-03-22 16:30:33 (9920): Successfully stopped VM.
2023-03-22 16:30:33 (9920): Deregistering VM. (boinc_df18f034d891b401, slot#4)
2023-03-22 16:30:33 (9920): Removing network bandwidth throttle group from VM.
2023-03-22 16:30:33 (9920): Removing VM from VirtualBox.
16:30:38 (9920): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN