Stderr output

<core_client_version>7.22.0</core_client_version>
<![CDATA[
<stderr_txt>
2023-03-23 14:50:51 (12192): Detected: vboxwrapper 26206
2023-03-23 14:50:51 (12192): Detected: BOINC client v7.22.0
2023-03-23 14:50:52 (12192): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2023-03-23 14:50:53 (12192): Successfully copied 'init_data.xml' to the shared directory.
2023-03-23 14:50:53 (12192): Create VM. (boinc_35a32e8f14428c3a, slot#0)
2023-03-23 14:50:54 (12192): Setting Memory Size for VM. (4400MB)
2023-03-23 14:50:54 (12192): Setting CPU Count for VM. (4)
2023-03-23 14:50:54 (12192): Setting Chipset Options for VM.
2023-03-23 14:50:54 (12192): Setting Graphics Controller Options for VM.
2023-03-23 14:50:55 (12192): Setting Boot Options for VM.
2023-03-23 14:50:55 (12192): Setting Network Configuration for NAT.
2023-03-23 14:50:55 (12192): Enabling VM Network Access.
2023-03-23 14:50:56 (12192): Disabling USB Support for VM.
2023-03-23 14:50:56 (12192): Disabling COM Port Support for VM.
2023-03-23 14:50:56 (12192): Disabling LPT Port Support for VM.
2023-03-23 14:50:56 (12192): Disabling Audio Support for VM.
2023-03-23 14:50:57 (12192): Disabling Clipboard Support for VM.
2023-03-23 14:50:57 (12192): Disabling Drag and Drop Support for VM.
2023-03-23 14:50:57 (12192): Adding storage controller(s) to VM.
2023-03-23 14:50:57 (12192): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2023-03-23 14:51:00 (12192): Adding VirtualBox Guest Additions to VM.
2023-03-23 14:51:01 (12192): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2023-03-23 14:51:01 (12192): forwarding host port 56298 to guest port 80
2023-03-23 14:51:01 (12192): Enabling remote desktop for VM.
2023-03-23 14:51:02 (12192): Enabling shared directory for VM.
2023-03-23 14:51:02 (12192): Starting VM using VBoxManage interface. (boinc_35a32e8f14428c3a, slot#0)
2023-03-23 14:51:09 (12192): Successfully started VM. (PID = '21436')
2023-03-23 14:51:09 (12192): Reporting VM Process ID to BOINC.
2023-03-23 14:51:09 (12192): Guest Log: BIOS: VirtualBox 7.0.6
2023-03-23 14:51:09 (12192): Guest Log: CPUID EDX: 0x178bfbff
2023-03-23 14:51:09 (12192): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2023-03-23 14:51:09 (12192): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2023-03-23 14:51:09 (12192): VM state change detected. (old = 'poweredoff', new = 'running')
2023-03-23 14:51:09 (12192): Detected: Web Application Enabled (http://localhost:56298)
2023-03-23 14:51:09 (12192): Detected: Remote Desktop Enabled (localhost:56299)
2023-03-23 14:51:09 (12192): Preference change detected
2023-03-23 14:51:09 (12192): Setting CPU throttle for VM. (100%)
2023-03-23 14:51:09 (12192): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 600 seconds) or (Vbox_job.xml: 900 seconds))
2023-03-23 14:51:11 (12192): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2023-03-23 14:51:11 (12192): Guest Log: BIOS: Booting from Hard Disk...
2023-03-23 14:51:14 (12192): Guest Log: BIOS: KBD: unsupported int 16h function 03
2023-03-23 14:51:14 (12192): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2023-03-23 14:51:14 (12192): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2023-03-23 14:51:14 (12192): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2023-03-23 14:51:14 (12192): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2023-03-23 14:51:14 (12192): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2023-03-23 14:51:14 (12192): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2023-03-23 14:51:14 (12192): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2023-03-23 14:51:14 (12192): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2023-03-23 14:51:14 (12192): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2023-03-23 14:51:14 (12192): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2023-03-23 14:51:14 (12192): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2023-03-23 14:51:14 (12192): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2023-03-23 14:51:14 (12192): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2023-03-23 14:51:14 (12192): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2023-03-23 14:51:14 (12192): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2023-03-23 14:51:14 (12192): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2023-03-23 14:51:14 (12192): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2023-03-23 14:51:14 (12192): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2023-03-23 14:51:14 (12192): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2023-03-23 14:51:14 (12192): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2023-03-23 14:51:14 (12192): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2023-03-23 14:51:14 (12192): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2023-03-23 14:51:14 (12192): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2023-03-23 14:51:14 (12192): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2023-03-23 14:51:14 (12192): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2023-03-23 14:51:14 (12192): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2023-03-23 14:51:14 (12192): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2023-03-23 14:51:14 (12192): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2023-03-23 14:51:14 (12192): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2023-03-23 14:51:14 (12192): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2023-03-23 14:51:14 (12192): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2023-03-23 14:51:20 (12192): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2023-03-23 14:51:20 (12192): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2023-03-23 14:51:25 (12192): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2023-03-23 14:51:25 (12192): Guest Log: 00:00:00.000137 main     Log opened 2023-03-23T13:51:23.509389000Z
2023-03-23 14:51:25 (12192): Guest Log: 00:00:00.000232 main     OS Product: Linux
2023-03-23 14:51:25 (12192): Guest Log: 00:00:00.000255 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2023-03-23 14:51:25 (12192): Guest Log: 00:00:00.000298 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2023-03-23 14:51:25 (12192): Guest Log: 00:00:00.000346 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2023-03-23 14:51:25 (12192): Guest Log: 00:00:00.000347 main     Process ID: 1301
2023-03-23 14:51:25 (12192): Guest Log: 00:00:00.000348 main     Package type: LINUX_64BITS_GENERIC
2023-03-23 14:51:25 (12192): Guest Log: 00:00:00.001411 main     5.2.32 r132073 started. Verbose level = 0
2023-03-23 14:51:26 (12192): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2023-03-23 14:51:26 (12192): Guest Log: [INFO] Mounting shared directory
2023-03-23 14:51:26 (12192): Guest Log: [INFO] Checking for init_data.xml
2023-03-23 14:51:28 (12192): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2023-03-23 14:51:28 (12192): Guest Log: [INFO] Detected branch: dev
2023-03-23 14:51:28 (12192): Guest Log: This is the dev version of the ATLAS job wrapper
2023-03-23 14:51:28 (12192): Guest Log: Copying input files
2023-03-23 14:51:30 (12192): Guest Log: Copied input files into RunAtlas.
2023-03-23 14:51:30 (12192): Guest Log: This VM did not configure a local http proxy via BOINC.
2023-03-23 14:51:30 (12192): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2023-03-23 14:51:30 (12192): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2023-03-23 14:51:30 (12192): Guest Log: Further information can be found at the LHC@home message board.
2023-03-23 14:51:37 (12192): Guest Log: Running cvmfs_config stat atlas.cern.ch
2023-03-23 14:51:38 (12192): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2023-03-23 14:51:38 (12192): Guest Log: 2.6.3.0 1576 0 32204 117085 4 1 3116365 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2023-03-23 14:51:38 (12192): Guest Log: copied the webapp to /var/www
2023-03-23 14:51:38 (12192): Guest Log: ATHENA_PROC_NUMBER=4
2023-03-23 14:51:38 (12192): Guest Log: ATHENA_CORE_NUMBER=4
2023-03-23 14:51:38 (12192): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2023-03-23 14:51:38 (12192): Guest Log:  *** Starting ATLAS job. (PandaID=5753961892 taskID=32413688) ***
2023-03-23 15:16:37 (12192): Guest Log:  *** Job finished ***
2023-03-23 15:16:37 (12192): Guest Log:  *** The last 20 lines of the pilot log: ***
2023-03-23 15:16:37 (12192): Guest Log: 2023-03-23 14:16:25,294 | INFO     | [data] copytool_out thread has finished
2023-03-23 15:16:37 (12192): Guest Log: 2023-03-23 14:16:25,304 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
2023-03-23 15:16:37 (12192): Guest Log: 2023-03-23 14:16:25,304 | INFO     | [job] queue monitor thread has finished
2023-03-23 15:16:37 (12192): Guest Log: 2023-03-23 14:16:28,041 | INFO     | [data] queue_monitor thread has finished
2023-03-23 15:16:37 (12192): Guest Log: 2023-03-23 14:16:33,730 | INFO     | job.realtimelogging is not enabled
2023-03-23 15:16:37 (12192): Guest Log: 2023-03-23 14:16:33,730 | INFO     | [payload] run_realtimelog thread has finished
2023-03-23 15:16:37 (12192): Guest Log: 2023-03-23 14:16:34,445 | INFO     | end of generic workflow (traces error code: 0)
2023-03-23 15:16:37 (12192): Guest Log: 2023-03-23 14:16:34,446 | INFO     | traces error code: 0
2023-03-23 15:16:37 (12192): Guest Log: 2023-03-23 14:16:34,446 | INFO     | pilot has finished
2023-03-23 15:16:37 (12192): Guest Log: 2023-03-23 14:16:34,553 [wrapper] ==== pilot stdout END ====
2023-03-23 15:16:37 (12192): Guest Log: 2023-03-23 14:16:34,559 [wrapper] ==== wrapper stdout RESUME ====
2023-03-23 15:16:37 (12192): Guest Log: 2023-03-23 14:16:34,565 [wrapper] pilotpid: 5415
2023-03-23 15:16:37 (12192): Guest Log: 2023-03-23 14:16:34,570 [wrapper] Pilot exit status: 0
2023-03-23 15:16:37 (12192): Guest Log: 2023-03-23 14:16:34,714 [wrapper] pandaids: 5753961892
2023-03-23 15:16:37 (12192): Guest Log: 2023-03-23 14:16:34,725 [wrapper] apfmon messages muted
2023-03-23 15:16:37 (12192): Guest Log: 2023-03-23 14:16:34,731 [wrapper] Test setup, not cleaning
2023-03-23 15:16:37 (12192): Guest Log: 2023-03-23 14:16:34,737 [wrapper] ==== wrapper stdout END ====
2023-03-23 15:16:37 (12192): Guest Log: 2023-03-23 14:16:34,743 [wrapper] ==== wrapper stderr END ====
2023-03-23 15:16:37 (12192): Guest Log: 2023-03-23 14:16:34,754 [wrapper] wrapperexiting ec=0, duration=1497
2023-03-23 15:16:37 (12192): Guest Log: 2023-03-23 14:16:34,760 [wrapper] apfmon messages muted
2023-03-23 15:16:37 (12192): Guest Log:  *** Error codes and diagnostics ***
2023-03-23 15:16:37 (12192): Guest Log:     "exeErrorCode": 0,
2023-03-23 15:16:37 (12192): Guest Log:     "exeErrorDiag": "",
2023-03-23 15:16:37 (12192): Guest Log:     "pilotErrorCode": 0,
2023-03-23 15:16:37 (12192): Guest Log:     "pilotErrorDiag": "",
2023-03-23 15:16:37 (12192): Guest Log:  *** Listing of results directory ***
2023-03-23 15:16:37 (12192): Guest Log: total 16436
2023-03-23 15:16:37 (12192): Guest Log: -rw-r--r--. 1 atlas atlas   386707 Mar 22 19:29 pilot3.tar.gz
2023-03-23 15:16:37 (12192): Guest Log: -rw-r--r--. 1 atlas atlas     4336 Mar 22 19:49 queuedata.json
2023-03-23 15:16:37 (12192): Guest Log: -rwx------. 1 atlas atlas    27542 Mar 22 19:49 runpilot2-wrapper.sh
2023-03-23 15:16:37 (12192): Guest Log: -rwxr-xr-x. 1 atlas atlas     9097 Mar 23 13:51 init_data.xml
2023-03-23 15:16:37 (12192): Guest Log: -rwxr-xr-x. 1 atlas atlas   398718 Mar 23 13:51 input.tar.gz
2023-03-23 15:16:37 (12192): Guest Log: -rwxr-xr-x. 1 atlas atlas    17789 Mar 23 13:51 start_atlas.sh
2023-03-23 15:16:37 (12192): Guest Log: lrwxrwxrwx. 1 atlas atlas       20 Mar 23 13:51 EVNT.29838250._000010.pool.root.1 -> /data/./ATLAS.root_0
2023-03-23 15:16:37 (12192): Guest Log: -rw-r--r--. 1 atlas atlas     2553 Mar 23 13:51 pandaJob.out
2023-03-23 15:16:37 (12192): Guest Log: -rw-------. 1 atlas atlas      424 Mar 23 13:51 setup.sh.local
2023-03-23 15:16:37 (12192): Guest Log: -rw-------. 1 atlas atlas   987935 Mar 23 13:52 agis_schedconf.cvmfs.json
2023-03-23 15:16:37 (12192): Guest Log: -rw-------. 1 atlas atlas  1426500 Mar 23 13:52 agis_ddmendpoints.agis.ALL.json
2023-03-23 15:16:37 (12192): Guest Log: drwx------. 4 atlas atlas      245 Mar 23 13:52 pilot3
2023-03-23 15:16:37 (12192): Guest Log: -rw-------. 1 atlas atlas 12900845 Mar 23 14:16 HITS.32413688._000229-2696836-1679514589.pool.root.1
2023-03-23 15:16:37 (12192): Guest Log: -rw-------. 1 atlas atlas     1022 Mar 23 14:16 memory_monitor_summary.json
2023-03-23 15:16:37 (12192): Guest Log: -rw-------. 1 atlas atlas   191314 Mar 23 14:16 log.32413688._000229-2696836-1679514589.job.log.tgz.1
2023-03-23 15:16:37 (12192): Guest Log: -rw-------. 1 atlas atlas     7700 Mar 23 14:16 heartbeat.json
2023-03-23 15:16:37 (12192): Guest Log: -rw-------. 1 atlas atlas     2940 Mar 23 14:16 pilotlog.txt
2023-03-23 15:16:37 (12192): Guest Log: -rw-------. 1 atlas atlas    96028 Mar 23 14:16 log.32413688._000229-2696836-1679514589.job.log.1
2023-03-23 15:16:37 (12192): Guest Log: -rw-------. 1 atlas atlas      402 Mar 23 14:16 output.list
2023-03-23 15:16:37 (12192): Guest Log: -rw-r--r--. 1 atlas atlas      677 Mar 23 14:16 runtime_log
2023-03-23 15:16:37 (12192): Guest Log: -rw-------. 1 atlas atlas   307200 Mar 23 14:16 result.tar.gz
2023-03-23 15:16:37 (12192): Guest Log: -rw-r--r--. 1 atlas atlas    11685 Mar 23 14:16 runtime_log.err
2023-03-23 15:16:37 (12192): Guest Log: -rw-------. 1 atlas atlas      636 Mar 23 14:16 F4ZKDmAeJz2n7Olcko1bjSoqABFKDmABFKDm7AsVDmPaGKDmkE9Erm.diag
2023-03-23 15:16:37 (12192): Guest Log: Looking for outputfile HITS.32413688._000229-2696836-1679514589.pool.root.1
2023-03-23 15:16:37 (12192): Guest Log: HITS file was successfully produced
2023-03-23 15:16:37 (12192): Guest Log: -rw-------. 1 atlas atlas 12900845 Mar 23 14:16 /home/atlas/RunAtlas/HITS.32413688._000229-2696836-1679514589.pool.root.1
2023-03-23 15:16:38 (12192): Guest Log: Successfully finished the ATLAS job!
2023-03-23 15:16:38 (12192): Guest Log: Copying the results back to the shared directory!
2023-03-23 15:16:38 (12192): Guest Log:  *** Contents of shared directory: ***
2023-03-23 15:16:38 (12192): Guest Log: total 439480
2023-03-23 15:16:38 (12192): Guest Log: -rwxrwxrwx. 1 root root 436382292 Mar 23 13:50 ATLAS.root_0
2023-03-23 15:16:38 (12192): Guest Log: -rwxrwxrwx. 1 root root  12900845 Mar 23 14:16 HITS.pool.root.1
2023-03-23 15:16:38 (12192): Guest Log: -rwxrwxrwx. 1 root root      9097 Mar 23 13:50 init_data.xml
2023-03-23 15:16:38 (12192): Guest Log: -rwxrwxrwx. 1 root root    398718 Mar 22 20:57 input.tar.gz
2023-03-23 15:16:38 (12192): Guest Log: -rwxrwxrwx. 1 root root    307200 Mar 23  2023 result.tar.gz
2023-03-23 15:16:38 (12192): Guest Log: -rwxrwxrwx. 1 root root     17789 Mar 22 20:57 start_atlas.sh
2023-03-23 15:16:38 (12192): Guest Log:  *** Success! Shutting down the machine. ***
2023-03-23 15:16:38 (12192): VM Completion File Detected.
2023-03-23 15:16:38 (12192): Powering off VM.
2023-03-23 15:16:38 (12192): Successfully stopped VM.
2023-03-23 15:16:38 (12192): Deregistering VM. (boinc_35a32e8f14428c3a, slot#0)
2023-03-23 15:16:38 (12192): Removing network bandwidth throttle group from VM.
2023-03-23 15:16:39 (12192): Removing VM from VirtualBox.
15:16:44 (12192): called boinc_finish(0)

</stderr_txt>
]]>

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