Name 3AmKDmkDc42n7Olcko1bjSoqABFKDmABFKDm7AsVDm8wGKDm9gMGtm_0
Workunit 2295886
Created 6 Apr 2023, 10:40:41 UTC
Sent 6 Apr 2023, 10:40:50 UTC
Report deadline 13 Apr 2023, 10:40:50 UTC
Received 6 Apr 2023, 11:13:17 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 4185
Run time 28 min 33 sec
CPU time 6 min 48 sec
Validate state Valid
Credit 35.54
Device peak FLOPS 10.84 GFLOPS
Application version ATLAS Simulation v3.01 (vbox64_mt_mcore_atlas)
windows_x86_64
Peak working set size 84.66 MB
Peak swap size 105.66 MB
Peak disk usage 555.30 MB

Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
2023-04-06 03:44:26 (21904): Detected: vboxwrapper 26206
2023-04-06 03:44:26 (21904): Detected: BOINC client v7.20.2
2023-04-06 03:44:27 (21904): Detected: VirtualBox VboxManage Interface (Version: 6.1.42)
2023-04-06 03:44:27 (21904): Successfully copied 'init_data.xml' to the shared directory.
2023-04-06 03:44:28 (21904): Create VM. (boinc_b71c686688ef9ac2, slot#6)
2023-04-06 03:44:28 (21904): Setting Memory Size for VM. (4200MB)
2023-04-06 03:44:28 (21904): Setting CPU Count for VM. (2)
2023-04-06 03:44:29 (21904): Setting Chipset Options for VM.
2023-04-06 03:44:29 (21904): Setting Graphics Controller Options for VM.
2023-04-06 03:44:29 (21904): Setting Boot Options for VM.
2023-04-06 03:44:29 (21904): Setting Network Configuration for NAT.
2023-04-06 03:44:30 (21904): Enabling VM Network Access.
2023-04-06 03:44:30 (21904): Disabling USB Support for VM.
2023-04-06 03:44:30 (21904): Disabling COM Port Support for VM.
2023-04-06 03:44:30 (21904): Disabling LPT Port Support for VM.
2023-04-06 03:44:31 (21904): Disabling Audio Support for VM.
2023-04-06 03:44:31 (21904): Disabling Clipboard Support for VM.
2023-04-06 03:44:31 (21904): Disabling Drag and Drop Support for VM.
2023-04-06 03:44:31 (21904): Adding storage controller(s) to VM.
2023-04-06 03:44:32 (21904): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2023-04-06 03:44:32 (21904): Adding VirtualBox Guest Additions to VM.
2023-04-06 03:44:32 (21904): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2023-04-06 03:44:33 (21904): forwarding host port 63379 to guest port 80
2023-04-06 03:44:33 (21904): Enabling remote desktop for VM.
2023-04-06 03:44:33 (21904): Enabling shared directory for VM.
2023-04-06 03:44:34 (21904): Starting VM using VBoxManage interface. (boinc_b71c686688ef9ac2, slot#6)
2023-04-06 03:44:38 (21904): Successfully started VM. (PID = '11696')
2023-04-06 03:44:38 (21904): Reporting VM Process ID to BOINC.
2023-04-06 03:44:38 (21904): Guest Log: BIOS: VirtualBox 6.1.42
2023-04-06 03:44:38 (21904): Guest Log: CPUID EDX: 0x178bfbff
2023-04-06 03:44:38 (21904): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2023-04-06 03:44:38 (21904): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2023-04-06 03:44:38 (21904): VM state change detected. (old = 'poweredoff', new = 'running')
2023-04-06 03:44:38 (21904): Detected: Web Application Enabled (http://localhost:63379)
2023-04-06 03:44:38 (21904): Detected: Remote Desktop Enabled (localhost:63382)
2023-04-06 03:44:38 (21904): Preference change detected
2023-04-06 03:44:38 (21904): Setting CPU throttle for VM. (100%)
2023-04-06 03:44:38 (21904): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2023-04-06 03:44:40 (21904): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2023-04-06 03:44:40 (21904): Guest Log: BIOS: Booting from Hard Disk...
2023-04-06 03:44:42 (21904): Guest Log: BIOS: KBD: unsupported int 16h function 03
2023-04-06 03:44:42 (21904): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2023-04-06 03:44:42 (21904): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2023-04-06 03:44:42 (21904): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2023-04-06 03:44:42 (21904): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2023-04-06 03:44:42 (21904): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2023-04-06 03:44:42 (21904): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2023-04-06 03:44:42 (21904): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2023-04-06 03:44:42 (21904): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2023-04-06 03:44:42 (21904): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2023-04-06 03:44:42 (21904): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2023-04-06 03:44:42 (21904): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2023-04-06 03:44:42 (21904): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2023-04-06 03:44:42 (21904): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2023-04-06 03:44:42 (21904): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2023-04-06 03:44:42 (21904): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2023-04-06 03:44:42 (21904): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2023-04-06 03:44:42 (21904): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2023-04-06 03:44:42 (21904): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2023-04-06 03:44:42 (21904): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2023-04-06 03:44:42 (21904): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2023-04-06 03:44:42 (21904): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2023-04-06 03:44:42 (21904): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2023-04-06 03:44:42 (21904): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2023-04-06 03:44:42 (21904): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2023-04-06 03:44:42 (21904): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2023-04-06 03:44:42 (21904): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2023-04-06 03:44:42 (21904): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2023-04-06 03:44:42 (21904): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2023-04-06 03:44:42 (21904): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2023-04-06 03:44:42 (21904): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2023-04-06 03:44:42 (21904): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2023-04-06 03:44:47 (21904): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2023-04-06 03:44:47 (21904): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2023-04-06 03:44:52 (21904): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2023-04-06 03:44:52 (21904): Guest Log: 00:00:00.000087 main     Log opened 2023-04-06T03:44:49.837598000Z
2023-04-06 03:44:52 (21904): Guest Log: 00:00:00.000158 main     OS Product: Linux
2023-04-06 03:44:52 (21904): Guest Log: 00:00:00.000179 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2023-04-06 03:44:52 (21904): Guest Log: 00:00:00.000196 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2023-04-06 03:44:52 (21904): Guest Log: 00:00:00.000213 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2023-04-06 03:44:52 (21904): Guest Log: 00:00:00.000213 main     Process ID: 1259
2023-04-06 03:44:52 (21904): Guest Log: 00:00:00.000214 main     Package type: LINUX_64BITS_GENERIC
2023-04-06 03:44:52 (21904): Guest Log: 00:00:00.001045 main     5.2.32 r132073 started. Verbose level = 0
2023-04-06 03:44:52 (21904): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2023-04-06 03:44:52 (21904): Guest Log: [INFO] Mounting shared directory
2023-04-06 03:44:52 (21904): Guest Log: [INFO] Checking for init_data.xml
2023-04-06 03:45:02 (21904): Guest Log: 00:00:10.006069 timesync vgsvcTimeSyncWorker: Radical guest time change: 25 211 930 023 000ns (GuestNow=1 680 777 901 771 784 000 ns GuestLast=1 680 752 689 841 761 000 ns fSetTimeLastLoop=true )
2023-04-06 03:45:47 (21904): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2023-04-06 03:45:47 (21904): Guest Log: [INFO] Detected branch: dev
2023-04-06 03:45:47 (21904): Guest Log: This is the dev version of the ATLAS job wrapper
2023-04-06 03:45:47 (21904): Guest Log: Copying input files
2023-04-06 03:45:48 (21904): Guest Log: Copied input files into RunAtlas.
2023-04-06 03:45:48 (21904): Guest Log: This VM did not configure a local http proxy via BOINC.
2023-04-06 03:45:48 (21904): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2023-04-06 03:45:48 (21904): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2023-04-06 03:45:48 (21904): Guest Log: Further information can be found at the LHC@home message board.
2023-04-06 03:46:40 (21904): Guest Log: Running cvmfs_config stat atlas.cern.ch
2023-04-06 03:46:40 (21904): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2023-04-06 03:46:40 (21904): Guest Log: 2.6.3.0 1558 1 30180 117616 4 1 3116370 4096000 0 65024 0 0 n/a 1 1 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2023-04-06 03:46:40 (21904): Guest Log: copied the webapp to /var/www
2023-04-06 03:46:40 (21904): Guest Log: ATHENA_PROC_NUMBER=2
2023-04-06 03:46:40 (21904): Guest Log: ATHENA_CORE_NUMBER=2
2023-04-06 03:46:41 (21904): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2023-04-06 03:46:41 (21904): Guest Log:  *** Starting ATLAS job. (PandaID=5810946628 taskID=NULL&cor) ***
2023-04-06 04:12:51 (21904): Guest Log:  *** Job finished ***
2023-04-06 04:12:51 (21904): Guest Log:  *** The last 20 lines of the pilot log: ***
2023-04-06 04:12:51 (21904): Guest Log:  *** Error codes and diagnostics ***
2023-04-06 04:12:51 (21904): Guest Log:     "exeErrorCode": 0,
2023-04-06 04:12:51 (21904): Guest Log:     "exeErrorDiag": "",
2023-04-06 04:12:51 (21904): Guest Log:     "pilotErrorCode": 0,
2023-04-06 04:12:51 (21904): Guest Log:     "pilotErrorDiag": "",
2023-04-06 04:12:51 (21904): Guest Log:  *** Listing of results directory ***
2023-04-06 04:12:51 (21904): Guest Log: total 7388
2023-04-06 04:12:51 (21904): Guest Log: -rw-r--r--. 1 atlas atlas  393247 Apr  6 10:22 pilot3.tar.gz
2023-04-06 04:12:51 (21904): Guest Log: -rwx------. 1 atlas atlas   27542 Apr  6 10:40 runpilot2-wrapper.sh
2023-04-06 04:12:51 (21904): Guest Log: -rw-r--r--. 1 atlas atlas    4388 Apr  6 10:40 queuedata.json
2023-04-06 04:12:51 (21904): Guest Log: -rwxr-xr-x. 1 atlas atlas    9181 Apr  6 10:45 init_data.xml
2023-04-06 04:12:51 (21904): Guest Log: -rwxr-xr-x. 1 atlas atlas  403672 Apr  6 10:45 input.tar.gz
2023-04-06 04:12:51 (21904): Guest Log: -rwxr-xr-x. 1 atlas atlas   17600 Apr  6 10:45 start_atlas.sh
2023-04-06 04:12:51 (21904): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Apr  6 10:45 EVNT.04972714._000026.pool.root.1 -> /data/./ATLAS.root_0
2023-04-06 04:12:51 (21904): Guest Log: -rw-r--r--. 1 atlas atlas    2752 Apr  6 10:46 pandaJob.out
2023-04-06 04:12:51 (21904): Guest Log: -rw-------. 1 atlas atlas     424 Apr  6 10:46 setup.sh.local
2023-04-06 04:12:51 (21904): Guest Log: -rw-------. 1 atlas atlas 1433279 Apr  6 10:49 cric_ddmendpoints.json
2023-04-06 04:12:51 (21904): Guest Log: -rw-------. 1 atlas atlas 1016888 Apr  6 10:49 agis_schedconf.cvmfs.json
2023-04-06 04:12:51 (21904): Guest Log: drwx------. 4 atlas atlas     284 Apr  6 10:50 pilot3
2023-04-06 04:12:51 (21904): Guest Log: -rw-------. 1 atlas atlas 1538646 Apr  6 11:05 output.1.0a02caf3-e47e-45dc-8299-f2e869216a99_5867.pool.root
2023-04-06 04:12:51 (21904): Guest Log: -rw-------. 1 atlas atlas    1025 Apr  6 11:05 memory_monitor_summary.json
2023-04-06 04:12:51 (21904): Guest Log: -rw-------. 1 atlas atlas  429516 Apr  6 11:08 0a02caf3-e47e-45dc-8299-f2e869216a99_5867.1.job.log.tgz
2023-04-06 04:12:51 (21904): Guest Log: -rw-------. 1 atlas atlas    7913 Apr  6 11:12 heartbeat.json
2023-04-06 04:12:51 (21904): Guest Log: -rw-------. 1 atlas atlas    3022 Apr  6 11:12 pilotlog.txt
2023-04-06 04:12:51 (21904): Guest Log: -rw-------. 1 atlas atlas  115128 Apr  6 11:12 0a02caf3-e47e-45dc-8299-f2e869216a99_5867.1.job.log
2023-04-06 04:12:51 (21904): Guest Log: -rw-------. 1 atlas atlas     460 Apr  6 11:12 output.list
2023-04-06 04:12:51 (21904): Guest Log: -rw-r--r--. 1 atlas atlas     744 Apr  6 11:12 runtime_log
2023-04-06 04:12:51 (21904): Guest Log: -rw-------. 1 atlas atlas 2099200 Apr  6 11:12 result.tar.gz
2023-04-06 04:12:51 (21904): Guest Log: -rw-r--r--. 1 atlas atlas   11904 Apr  6 11:12 runtime_log.err
2023-04-06 04:12:51 (21904): Guest Log: -rw-------. 1 atlas atlas     638 Apr  6 11:12 3AmKDmkDc42n7Olcko1bjSoqABFKDmABFKDm7AsVDm8wGKDm9gMGtm.diag
2023-04-06 04:12:51 (21904): Guest Log: Looking for outputfile output.1.0a02caf3-e47e-45dc-8299-f2e869216a99_5867.pool.root
2023-04-06 04:12:51 (21904): Guest Log: HITS file was successfully produced
2023-04-06 04:12:51 (21904): Guest Log: -rw-------. 1 atlas atlas 1538646 Apr  6 11:05 /home/atlas/RunAtlas/output.1.0a02caf3-e47e-45dc-8299-f2e869216a99_5867.pool.root
2023-04-06 04:12:51 (21904): Guest Log: lsof on HITS file
2023-04-06 04:12:51 (21904): Guest Log: /home/atlas/ATLASJobWrapper.sh: line 193: lsof: command not found
2023-04-06 04:12:51 (21904): Guest Log: Successfully finished the ATLAS job!
2023-04-06 04:12:51 (21904): Guest Log: Copying the results back to the shared directory!
2023-04-06 04:12:51 (21904): Guest Log:  *** Contents of shared directory: ***
2023-04-06 04:12:51 (21904): Guest Log: total 40336
2023-04-06 04:12:51 (21904): Guest Log: -rwxrwxrwx. 1 root root 37224345 Apr  6 10:44 ATLAS.root_0
2023-04-06 04:12:51 (21904): Guest Log: -rwxrwxrwx. 1 root root  1538646 Apr  6 11:05 HITS.pool.root.1
2023-04-06 04:12:51 (21904): Guest Log: -rwxrwxrwx. 1 root root     9181 Apr  6 10:44 init_data.xml
2023-04-06 04:12:51 (21904): Guest Log: -rwxrwxrwx. 1 root root   403672 Apr  6 10:40 input.tar.gz
2023-04-06 04:12:51 (21904): Guest Log: -rwxrwxrwx. 1 root root  2099200 Apr  6  2023 result.tar.gz
2023-04-06 04:12:51 (21904): Guest Log: -rwxrwxrwx. 1 root root    17600 Apr  6 10:40 start_atlas.sh
2023-04-06 04:12:51 (21904): Guest Log:  *** Success! Shutting down the machine. ***
2023-04-06 04:12:51 (21904): VM Completion File Detected.
2023-04-06 04:12:51 (21904): Powering off VM.
2023-04-06 04:12:52 (21904): Successfully stopped VM.
2023-04-06 04:12:52 (21904): Deregistering VM. (boinc_b71c686688ef9ac2, slot#6)
2023-04-06 04:12:52 (21904): Removing network bandwidth throttle group from VM.
2023-04-06 04:12:52 (21904): Removing VM from VirtualBox.
04:12:57 (21904): called boinc_finish(0)

</stderr_txt>
]]>


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