Name b5yKDmM9u42n7Olcko1bjSoqABFKDmABFKDm7AsVDmN2GKDmcoIahm_0
Workunit 2296155
Created 7 Apr 2023, 6:53:18 UTC
Sent 7 Apr 2023, 6:53:37 UTC
Report deadline 14 Apr 2023, 6:53:37 UTC
Received 7 Apr 2023, 7:10:23 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 4852
Run time 15 min 5 sec
CPU time 7 min 43 sec
Validate state Valid
Credit 13.04
Device peak FLOPS 9.92 GFLOPS
Application version ATLAS Simulation v3.01 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 1.52 GB
Peak swap size 2.13 GB
Peak disk usage 84.73 MB

Stderr output

<core_client_version>7.20.5</core_client_version>
<![CDATA[
<stderr_txt>
08:54:08 (1859460): wrapper (7.7.26015): starting
08:54:08 (1859460): wrapper: running run_atlas (--nthreads 2)
[2023-04-07 08:54:08] Arguments: --nthreads 2
[2023-04-07 08:54:08] Threads: 2
[2023-04-07 08:54:08] Checking for CVMFS
[2023-04-07 08:54:08] Probing /cvmfs/atlas.cern.ch... OK
[2023-04-07 08:54:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2023-04-07 08:54:08] Running cvmfs_config stat atlas.cern.ch
[2023-04-07 08:54:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2023-04-07 08:54:09] 2.10.0.0 260113 11179 88744 117654 2 244 9562796 10240001 854 130560 0 33740136 99.965 2874888 4804 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.101:3128 1
[2023-04-07 08:54:09] CVMFS is ok
[2023-04-07 08:54:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2023-04-07 08:54:09] Checking for apptainer binary...
[2023-04-07 08:54:09] Using apptainer found in PATH at /usr/bin/apptainer
[2023-04-07 08:54:09] Running /usr/bin/apptainer --version
[2023-04-07 08:54:09] apptainer version 1.1.0-rc.2
[2023-04-07 08:54:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2023-04-07 08:54:09] atlas7l1
[2023-04-07 08:54:09] apptainer works
[2023-04-07 08:54:09] Set ATHENA_PROC_NUMBER=2
[2023-04-07 08:54:09] Set ATHENA_CORE_NUMBER=2
[2023-04-07 08:54:09] Starting ATLAS job with PandaID=5811969980
[2023-04-07 08:54:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc_data/boinc-01/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2023-04-07 09:09:10]  *** The last 200 lines of the pilot log: ***
[2023-04-07 09:09:10] L3 cache:              24576K
[2023-04-07 09:09:10] NUMA node0 CPU(s):     0-15
[2023-04-07 09:09:10] Flags:                 fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush mmx fxsr sse sse2 ss syscall nx pdpe1gb rdtscp lm constant_tsc arch_perfmon nopl xtopology tsc_re
[2023-04-07 09:09:10] 2023-04-07 07:08:55,744 | INFO     | pilot.util.workernode            | get_cpu_cores             | found 16 cores (1 cores per socket, 16 sockets)
[2023-04-07 09:09:10] 2023-04-07 07:08:55,744 | DEBUG    | pilot.util.workernode            | get_cpu_cores             | current model string: Intel(R) Xeon(R) Silver 4314 CPU @ 2.40GHz 24576 KB
[2023-04-07 09:09:10] 2023-04-07 07:08:55,744 | DEBUG    | pilot.util.workernode            | get_cpu_cores             | updated model string: Intel(R) Xeon(R) Silver 4314 CPU @ 2.40GHz 24576 KB 16-Core Processor
[2023-04-07 09:09:10] 2023-04-07 07:08:55,745 | INFO     | pilot.util.container             | print_executable          | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2023-04-07 09:09:10] 2023-04-07 07:08:55,771 | INFO     | pilot.util.container             | print_executable          | executing command: python3 /var/lib/boinc_data/boinc-01/slots/2/pilot3/pilot/scripts/cpu_arch.py --a
[2023-04-07 09:09:10] 2023-04-07 07:08:55,933 | DEBUG    | pilot.util.workernode            | get_cpu_arch              | CPU arch script returned: x86-64-v4
[2023-04-07 09:09:10] 2023-04-07 07:08:55,934 | INFO     | pilot.user.atlas.utilities       | get_memory_values         | using path: /var/lib/boinc_data/boinc-01/slots/2/PanDA_Pilot-5811969980/memory_monitor_summary.json 
[2023-04-07 09:09:10] 2023-04-07 07:08:55,936 | DEBUG    | pilot.user.atlas.utilities       | get_memory_monitor_info   | summary_dictionary={'Avg': {'nprocs': 6.0, 'nthreads': 6.833, 'pss': 1233855.0, 'rchar': 226518994.0
[2023-04-07 09:09:10] 2023-04-07 07:08:55,936 | INFO     | pilot.user.atlas.utilities       | get_memory_monitor_info   | extracted standard info from prmon json
[2023-04-07 09:09:10] 2023-04-07 07:08:55,936 | INFO     | pilot.user.atlas.utilities       | get_memory_monitor_info   | extracted standard memory fields from prmon json
[2023-04-07 09:09:10] 2023-04-07 07:08:55,936 | INFO     | pilot.util.timing                | timing_report             | ..............................
[2023-04-07 09:09:10] 2023-04-07 07:08:55,937 | INFO     | pilot.util.timing                | timing_report             | . Timing measurements:
[2023-04-07 09:09:10] 2023-04-07 07:08:55,937 | INFO     | pilot.util.timing                | timing_report             | . get job = 54 s
[2023-04-07 09:09:10] 2023-04-07 07:08:55,937 | INFO     | pilot.util.timing                | timing_report             | . initial setup = 57 s
[2023-04-07 09:09:10] 2023-04-07 07:08:55,937 | INFO     | pilot.util.timing                | timing_report             | . payload setup = 4 s
[2023-04-07 09:09:10] 2023-04-07 07:08:55,937 | INFO     | pilot.util.timing                | timing_report             | . stage-in = 44 s
[2023-04-07 09:09:10] 2023-04-07 07:08:55,937 | INFO     | pilot.util.timing                | timing_report             | . payload execution = 340 s
[2023-04-07 09:09:10] 2023-04-07 07:08:55,937 | INFO     | pilot.util.timing                | timing_report             | . stage-out = 364 s
[2023-04-07 09:09:10] 2023-04-07 07:08:55,938 | INFO     | pilot.util.timing                | timing_report             | ..............................
[2023-04-07 09:09:10] 2023-04-07 07:08:55,938 | DEBUG    | pilot.control.job                | send_state                | data={'jobId': '5811969980', 'state': 'finished', 'timestamp': '2023-04-07T09:08:55+01:00', 'siteNam
[2023-04-07 09:09:10] 2023-04-07 07:08:55,939 | DEBUG    | pilot.control.job                | write_heartbeat_to_file   | heartbeat dictionary: {'jobId': '5811969980', 'state': 'finished', 'timestamp': '2023-04-07T09:08:55
[2023-04-07 09:09:10] 2023-04-07 07:08:55,940 | DEBUG    | pilot.control.job                | write_heartbeat_to_file   | wrote heartbeat to file: /var/lib/boinc_data/boinc-01/slots/2/heartbeat.json
[2023-04-07 09:09:10] 2023-04-07 07:08:55,994 | INFO     | pilot.control.job                | make_job_report           | 
[2023-04-07 09:09:10] 2023-04-07 07:08:55,995 | INFO     | pilot.control.job                | make_job_report           | job summary report
[2023-04-07 09:09:10] 2023-04-07 07:08:55,995 | INFO     | pilot.control.job                | make_job_report           | --------------------------------------------------
[2023-04-07 09:09:10] 2023-04-07 07:08:55,995 | INFO     | pilot.control.job                | make_job_report           | PanDA job id: 5811969980
[2023-04-07 09:09:10] 2023-04-07 07:08:55,995 | INFO     | pilot.control.job                | make_job_report           | task id: NULL
[2023-04-07 09:09:10] 2023-04-07 07:08:55,996 | INFO     | pilot.control.job                | make_job_report           | errors: (none)
[2023-04-07 09:09:10] 2023-04-07 07:08:55,996 | INFO     | pilot.control.job                | make_job_report           | status: LOG_TRANSFER = DONE 
[2023-04-07 09:09:10] 2023-04-07 07:08:55,996 | INFO     | pilot.control.job                | make_job_report           | pilot state: finished 
[2023-04-07 09:09:10] 2023-04-07 07:08:55,996 | INFO     | pilot.control.job                | make_job_report           | transexitcode: 0
[2023-04-07 09:09:10] 2023-04-07 07:08:55,996 | INFO     | pilot.control.job                | make_job_report           | exeerrorcode: 0
[2023-04-07 09:09:10] 2023-04-07 07:08:55,996 | INFO     | pilot.control.job                | make_job_report           | exeerrordiag: 
[2023-04-07 09:09:10] 2023-04-07 07:08:55,996 | INFO     | pilot.control.job                | make_job_report           | exitcode: 0
[2023-04-07 09:09:10] 2023-04-07 07:08:55,997 | INFO     | pilot.control.job                | make_job_report           | exitmsg: OK
[2023-04-07 09:09:10] 2023-04-07 07:08:55,997 | INFO     | pilot.control.job                | make_job_report           | cpuconsumptiontime: 471 s
[2023-04-07 09:09:10] 2023-04-07 07:08:55,997 | INFO     | pilot.control.job                | make_job_report           | nevents: 2
[2023-04-07 09:09:10] 2023-04-07 07:08:55,997 | INFO     | pilot.control.job                | make_job_report           | neventsw: 0
[2023-04-07 09:09:10] 2023-04-07 07:08:55,997 | INFO     | pilot.control.job                | make_job_report           | pid: 1874333
[2023-04-07 09:09:10] 2023-04-07 07:08:55,997 | INFO     | pilot.control.job                | make_job_report           | pgrp: 1874333
[2023-04-07 09:09:10] 2023-04-07 07:08:55,997 | INFO     | pilot.control.job                | make_job_report           | corecount: 2
[2023-04-07 09:09:10] 2023-04-07 07:08:55,997 | INFO     | pilot.control.job                | make_job_report           | event service: False
[2023-04-07 09:09:10] 2023-04-07 07:08:55,998 | INFO     | pilot.control.job                | make_job_report           | sizes: {0: 2549184, 1: 2550209, 12: 2550209, 22: 2550237, 33: 2550265, 44: 2550293, 45: 2550509, 54:
[2023-04-07 09:09:10] 2023-04-07 07:08:55,998 | INFO     | pilot.control.job                | make_job_report           | --------------------------------------------------
[2023-04-07 09:09:10] 2023-04-07 07:08:55,998 | INFO     | pilot.control.job                | make_job_report           | 
[2023-04-07 09:09:10] 2023-04-07 07:08:55,998 | DEBUG    | pilot.control.job                | has_job_completed         | ls -lF /var/lib/boinc_data/boinc-01/slots/2:
[2023-04-07 09:09:10] 
[2023-04-07 09:09:10] 2023-04-07 07:08:55,998 | INFO     | pilot.util.container             | print_executable          | executing command: ls -lF /var/lib/boinc_data/boinc-01/slots/2
[2023-04-07 09:09:10] 2023-04-07 07:08:56,019 | DEBUG    | pilot.control.job                | has_job_completed         | total 43236
[2023-04-07 09:09:10] -rw------- 1 yeti yeti   295132 Apr  7 09:08 518b859d-765b-4d26-adcf-f177b359b73a_43389.1.job.log
[2023-04-07 09:09:10] -rw------- 1 yeti yeti   430507 Apr  7 09:06 518b859d-765b-4d26-adcf-f177b359b73a_43389.1.job.log.tgz
[2023-04-07 09:09:10] -rw-r--r-- 2 yeti yeti 37708683 Apr  7 08:54 EVNT.04972714._000031.pool.root.1
[2023-04-07 09:09:10] drwxrwx--- 3 yeti yeti     4096 Apr  7 09:08 PanDA_Pilot-5811969980/
[2023-04-07 09:09:10] -rw------- 1 yeti yeti  1016912 Apr  7 08:54 agis_schedconf.cvmfs.json
[2023-04-07 09:09:10] -rw------- 1 yeti yeti      144 Apr  7 08:54 b5yKDmM9u42n7Olcko1bjSoqABFKDmABFKDm7AsVDmN2GKDmcoIahm.diag
[2023-04-07 09:09:10] -rw-rw-r-- 1 yeti yeti        0 Apr  7 08:54 boinc_lockfile
[2023-04-07 09:09:10] -rw-rw-r-- 1 yeti yeti     8192 Apr  7 09:08 boinc_mmap_file
[2023-04-07 09:09:10] -rw-rw-r-- 1 yeti yeti      532 Apr  7 09:01 boinc_task_state.xml
[2023-04-07 09:09:10] -rw------- 1 yeti yeti  1431945 Apr  7 08:55 cric_ddmendpoints.json
[2023-04-07 09:09:10] -rw------- 1 yeti yeti     8308 Apr  7 09:08 heartbeat.json
[2023-04-07 09:09:10] -rw-rw-r-- 1 yeti yeti     6447 Apr  7 08:54 init_data.xml
[2023-04-07 09:09:10] -rw-r--r-- 2 yeti yeti   412385 Apr  7 08:54 input.tar.gz
[2023-04-07 09:09:10] -rw-rw-r-- 1 yeti yeti      112 Apr  7 08:54 job.xml
[2023-04-07 09:09:10] -rw------- 1 yeti yeti     1008 Apr  7 09:02 memory_monitor_summary.json
[2023-04-07 09:09:10] -rw------- 1 yeti yeti  2101839 Apr  7 09:02 output.1.518b859d-765b-4d26-adcf-f177b359b73a_43389.pool.root
[2023-04-07 09:09:10] -rw------- 1 yeti yeti      464 Apr  7 09:08 output.list
[2023-04-07 09:09:10] -rw-rw-r-- 1 yeti yeti     2667 Apr  7 08:54 pandaJob.out
[2023-04-07 09:09:10] drwx------ 4 yeti yeti     4096 Apr  7 08:56 pilot3/
[2023-04-07 09:09:10] -rw------- 1 yeti yeti   401189 Apr  7 08:53 pilot3.tar.gz
[2023-04-07 09:09:10] -rw------- 1 yeti yeti   281383 Apr  7 09:08 pilotlog.txt
[2023-04-07 09:09:10] -rw-r--r-- 1 yeti yeti     4388 Apr  7 08:50 queuedata.json
[2023-04-07 09:09:10] -rwxr-xr-x 1 yeti yeti     7986 Apr  7 08:54 run_atlas*
[2023-04-07 09:09:10] -rwx------ 1 yeti yeti    27540 Apr  7 08:53 runpilot2-wrapper.sh*
[2023-04-07 09:09:10] -rw-rw-r-- 1 yeti yeti      407 Apr  7 08:54 runtime_log
[2023-04-07 09:09:10] -rw-rw-r-- 1 yeti yeti     8344 Apr  7 08:54 runtime_log.err
[2023-04-07 09:09:10] -rw------- 1 yeti yeti      462 Apr  7 08:54 setup.sh.local
[2023-04-07 09:09:10] drwxrwx--x 2 yeti yeti     4096 Apr  7 08:54 shared/
[2023-04-07 09:09:10] -rw-r--r-- 2 yeti yeti    17632 Apr  7 08:54 start_atlas.sh
[2023-04-07 09:09:10] -rw-rw-r-- 1 yeti yeti     1769 Apr  7 08:54 stderr.txt
[2023-04-07 09:09:10] -rw-rw-r-- 1 yeti yeti      107 Apr  7 08:54 wrapper_26015_x86_64-pc-linux-gnu
[2023-04-07 09:09:10] -rw-rw-r-- 1 yeti yeti       24 Apr  7 09:08 wrapper_checkpoint.txt
[2023-04-07 09:09:10] 2023-04-07 07:08:56,020 | INFO     | pilot.util.queuehandling         | queue_report              | queue jobs had 0 job(s) [purged]
[2023-04-07 09:09:10] 2023-04-07 07:08:56,020 | INFO     | pilot.util.queuehandling         | queue_report              | queue payloads had 0 job(s) [purged]
[2023-04-07 09:09:10] 2023-04-07 07:08:56,020 | INFO     | pilot.util.queuehandling         | queue_report              | queue data_in had 0 job(s) [purged]
[2023-04-07 09:09:10] 2023-04-07 07:08:56,021 | INFO     | pilot.util.queuehandling         | queue_report              | queue data_out had 0 job(s) [purged]
[2023-04-07 09:09:10] 2023-04-07 07:08:56,021 | INFO     | pilot.util.queuehandling         | queue_report              | queue current_data_in had 0 job(s) [purged]
[2023-04-07 09:09:10] 2023-04-07 07:08:56,021 | INFO     | pilot.util.queuehandling         | queue_report              | queue validated_jobs had 0 job(s) [purged]
[2023-04-07 09:09:10] 2023-04-07 07:08:56,021 | INFO     | pilot.util.queuehandling         | queue_report              | queue validated_payloads had 0 job(s) [purged]
[2023-04-07 09:09:10] 2023-04-07 07:08:56,021 | INFO     | pilot.util.queuehandling         | queue_report              | queue monitored_payloads had 0 job(s) [purged]
[2023-04-07 09:09:10] 2023-04-07 07:08:56,021 | INFO     | pilot.util.queuehandling         | queue_report              | queue finished_jobs had 0 job(s) [purged]
[2023-04-07 09:09:10] 2023-04-07 07:08:56,021 | INFO     | pilot.util.queuehandling         | queue_report              | queue finished_payloads had 0 job(s) [purged]
[2023-04-07 09:09:10] 2023-04-07 07:08:56,021 | INFO     | pilot.util.queuehandling         | queue_report              | queue finished_data_in had 1 job(s) [purged]
[2023-04-07 09:09:10] 2023-04-07 07:08:56,022 | INFO     | pilot.util.queuehandling         | queue_report              | queue finished_data_out had 0 job(s) [purged]
[2023-04-07 09:09:10] 2023-04-07 07:08:56,022 | INFO     | pilot.util.queuehandling         | queue_report              | queue failed_jobs had 0 job(s) [purged]
[2023-04-07 09:09:10] 2023-04-07 07:08:56,022 | INFO     | pilot.util.queuehandling         | queue_report              | queue failed_payloads had 0 job(s) [purged]
[2023-04-07 09:09:10] 2023-04-07 07:08:56,022 | INFO     | pilot.util.queuehandling         | queue_report              | queue failed_data_in had 0 job(s) [purged]
[2023-04-07 09:09:10] 2023-04-07 07:08:56,022 | INFO     | pilot.util.queuehandling         | queue_report              | queue failed_data_out had 0 job(s) [purged]
[2023-04-07 09:09:10] 2023-04-07 07:08:56,022 | INFO     | pilot.util.queuehandling         | queue_report              | queue completed_jobs had 0 job(s) [purged]
[2023-04-07 09:09:10] 2023-04-07 07:08:56,022 | INFO     | pilot.util.queuehandling         | queue_report              | queue completed_jobids has 1 job(s)
[2023-04-07 09:09:10] 2023-04-07 07:08:56,023 | INFO     | pilot.util.queuehandling         | queue_report              | queue realtimelog_payloads had 0 job(s) [purged]
[2023-04-07 09:09:10] 2023-04-07 07:08:56,023 | INFO     | pilot.util.queuehandling         | queue_report              | queue messages had 0 job(s) [purged]
[2023-04-07 09:09:10] 2023-04-07 07:08:56,023 | INFO     | pilot.control.job                | has_job_completed         | job 5811969980 has completed (purged errors)
[2023-04-07 09:09:10] 2023-04-07 07:08:56,023 | DEBUG    | pilot.util.realtimelogger        | cleanup                   | attempting real-time logger cleanup
[2023-04-07 09:09:10] 2023-04-07 07:08:56,023 | INFO     | pilot.util.processes             | cleanup                   | overall cleanup function is called
[2023-04-07 09:09:10] 2023-04-07 07:08:56,030 | DEBUG    | pilot.util.processes             | cleanup                   | work directory was removed: /var/lib/boinc_data/boinc-01/slots/2/PanDA_Pilot-5811969980
[2023-04-07 09:09:10] 2023-04-07 07:08:57,036 | INFO     | pilot.info.jobdata               | collect_zombies           | --- collectZombieJob: --- 10, [1874333]
[2023-04-07 09:09:10] 2023-04-07 07:08:57,036 | INFO     | pilot.info.jobdata               | collect_zombies           | zombie collector trying to kill pid 1874333
[2023-04-07 09:09:10] 2023-04-07 07:08:57,036 | INFO     | pilot.info.jobdata               | collect_zombies           | harmless exception when collecting zombies: [Errno 10] No child processes
[2023-04-07 09:09:10] 2023-04-07 07:08:57,681 | WARNING  | pilot.control.monitor            | get_max_running_time      | queuedata could not be extracted from queues, will use default for max running time (324000s)
[2023-04-07 09:09:10] 2023-04-07 07:08:58,041 | INFO     | pilot.util.processes             | cleanup                   | collected zombie processes
[2023-04-07 09:09:10] 2023-04-07 07:08:58,042 | INFO     | pilot.util.processes             | cleanup                   | will now attempt to kill all subprocesses of pid=1874333
[2023-04-07 09:09:10] 2023-04-07 07:08:58,086 | INFO     | pilot.util.processes             | kill_processes            | process IDs to be killed: [1874333] (in reverse order)
[2023-04-07 09:09:10] 2023-04-07 07:08:58,141 | WARNING  | pilot.util.processes             | kill_processes            | found no corresponding commands to process id(s)
[2023-04-07 09:09:10] 2023-04-07 07:08:58,141 | INFO     | pilot.util.processes             | kill_orphans              | Do not look for orphan processes in BOINC jobs
[2023-04-07 09:09:10] 2023-04-07 07:08:58,142 | DEBUG    | pilot.util.queuehandling         | purge_queue               | queue purged
[2023-04-07 09:09:10] 2023-04-07 07:08:58,142 | INFO     | pilot.control.job                | retrieve                  | ready for new job
[2023-04-07 09:09:10] 2023-04-07 07:08:58,142 | INFO     | root                             | retrieve                  | pilot has finished with previous job - re-establishing logging
[2023-04-07 09:09:10] 2023-04-07 07:08:58,143 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | ****************************************
[2023-04-07 09:09:10] 2023-04-07 07:08:58,144 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | ***  PanDA Pilot version 3.5.2 (29)  ***
[2023-04-07 09:09:10] 2023-04-07 07:08:58,144 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | ****************************************
[2023-04-07 09:09:10] 2023-04-07 07:08:58,144 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | 
[2023-04-07 09:09:10] 2023-04-07 07:08:58,144 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | pilot is running in a VM
[2023-04-07 09:09:10] 2023-04-07 07:08:58,144 | INFO     | pilot.util.auxiliary             | display_architecture_info | architecture information:
[2023-04-07 09:09:10] 2023-04-07 07:08:58,218 | INFO     | pilot.util.auxiliary             | display_architecture_info | 
[2023-04-07 09:09:10] LSB Version:	:core-4.1-amd64:core-4.1-noarch
[2023-04-07 09:09:10] Distributor ID:	CentOS
[2023-04-07 09:09:10] Description:	CentOS Linux release 7.9.2009 (Core)
[2023-04-07 09:09:10] Release:	7.9.2009
[2023-04-07 09:09:10] Codename:	Core
[2023-04-07 09:09:10] 2023-04-07 07:08:58,219 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | ****************************************
[2023-04-07 09:09:10] 2023-04-07 07:08:58,722 | DEBUG    | pilot.util.monitoring            | check_local_space         | checking local space on /var/lib/boinc_data/boinc-01/slots/2
[2023-04-07 09:09:10] 2023-04-07 07:08:58,722 | INFO     | pilot.util.container             | print_executable          | executing command: df -mP /var/lib/boinc_data/boinc-01/slots/2
[2023-04-07 09:09:10] 2023-04-07 07:08:58,737 | DEBUG    | pilot.util.workernode            | get_local_disk_space      | stdout=Filesystem     1048576-blocks  Used Available Capacity Mounted on
[2023-04-07 09:09:10] /dev/sda5               99971 29314     65547      31% /var/lib/boinc_data/boinc-01/slots/2
[2023-04-07 09:09:10] 2023-04-07 07:08:58,738 | DEBUG    | pilot.util.workernode            | get_local_disk_space      | stderr=
[2023-04-07 09:09:10] 2023-04-07 07:08:58,738 | INFO     | pilot.util.monitoring            | check_local_space         | sufficient remaining disk space (68731011072 B)
[2023-04-07 09:09:10] 2023-04-07 07:08:58,738 | WARNING  | pilot.control.job                | proceed_with_getjob       | since timefloor is set to 0, pilot was only allowed to run one job
[2023-04-07 09:09:10] 2023-04-07 07:08:58,739 | DEBUG    | pilot.control.job                | retrieve                  | will not set job_aborted yet
[2023-04-07 09:09:10] 2023-04-07 07:08:58,739 | WARNING  | pilot.control.monitor            | control                   | aborting monitor loop since graceful_stop has been set
[2023-04-07 09:09:10] 2023-04-07 07:08:58,739 | WARNING  | pilot.util.common                | should_abort              | data:copytool_out:received graceful stop - abort after this iteration
[2023-04-07 09:09:10] 2023-04-07 07:08:58,740 | INFO     | pilot.control.job                | retrieve                  | [job] retrieve thread has finished
[2023-04-07 09:09:10] 2023-04-07 07:08:58,740 | INFO     | pilot.control.monitor            | control                   | [monitor] control thread has ended
[2023-04-07 09:09:10] 2023-04-07 07:08:58,778 | DEBUG    | pilot.control.job                | control                   | job control ending since graceful_stop has been set
[2023-04-07 09:09:10] 2023-04-07 07:08:58,779 | DEBUG    | pilot.control.job                | control                   | will not set job_aborted yet
[2023-04-07 09:09:10] 2023-04-07 07:08:58,779 | INFO     | pilot.control.job                | control                   | [job] control thread has finished
[2023-04-07 09:09:10] 2023-04-07 07:08:58,837 | DEBUG    | pilot.control.payload            | control                   | payload control ending since graceful_stop has been set
[2023-04-07 09:09:10] 2023-04-07 07:08:58,837 | DEBUG    | pilot.control.payload            | control                   | will not set job_aborted yet
[2023-04-07 09:09:10] 2023-04-07 07:08:58,837 | INFO     | pilot.control.payload            | control                   | [payload] control thread has finished
[2023-04-07 09:09:10] 2023-04-07 07:08:59,137 | WARNING  | pilot.util.common                | should_abort              | data:queue_monitoring:received graceful stop - abort after this iteration
[2023-04-07 09:09:10] 2023-04-07 07:08:59,183 | DEBUG    | pilot.control.data               | control                   | data control ending since graceful_stop has been set
[2023-04-07 09:09:10] 2023-04-07 07:08:59,184 | DEBUG    | pilot.control.data               | control                   | will not set job_aborted yet
[2023-04-07 09:09:10] 2023-04-07 07:08:59,184 | INFO     | pilot.control.data               | control                   | [data] control thread has finished
[2023-04-07 09:09:10] 2023-04-07 07:08:59,251 | DEBUG    | pilot.control.payload            | execute_payloads          | will not set job_aborted yet
[2023-04-07 09:09:10] 2023-04-07 07:08:59,251 | INFO     | pilot.control.payload            | execute_payloads          | [payload] execute_payloads thread has finished
[2023-04-07 09:09:10] 2023-04-07 07:08:59,417 | DEBUG    | pilot.control.payload            | failed_post               | will not set job_aborted yet
[2023-04-07 09:09:10] 2023-04-07 07:08:59,418 | INFO     | pilot.control.payload            | failed_post               | [payload] failed_post thread has finished
[2023-04-07 09:09:10] 2023-04-07 07:08:59,667 | DEBUG    | pilot.control.data               | copytool_in               | will not set job_aborted yet
[2023-04-07 09:09:10] 2023-04-07 07:08:59,668 | INFO     | pilot.control.data               | copytool_in               | [data] copytool_in thread has finished
[2023-04-07 09:09:10] 2023-04-07 07:08:59,741 | DEBUG    | pilot.control.data               | copytool_out              | will not set job_aborted yet
[2023-04-07 09:09:10] 2023-04-07 07:08:59,741 | INFO     | pilot.control.data               | copytool_out              | [data] copytool_out thread has finished
[2023-04-07 09:09:10] 2023-04-07 07:09:00,017 | DEBUG    | pilot.control.job                | create_data_payload       | will not set job_aborted yet
[2023-04-07 09:09:10] 2023-04-07 07:09:00,017 | INFO     | pilot.control.job                | create_data_payload       | [job] create_data_payload thread has finished
[2023-04-07 09:09:10] 2023-04-07 07:09:00,050 | DEBUG    | pilot.control.payload            | validate_post             | will not set job_aborted yet
[2023-04-07 09:09:10] 2023-04-07 07:09:00,051 | INFO     | pilot.control.payload            | validate_post             | [payload] validate_post thread has finished
[2023-04-07 09:09:10] 2023-04-07 07:09:00,145 | DEBUG    | pilot.control.job                | validate                  | will not set job_aborted yet
[2023-04-07 09:09:10] 2023-04-07 07:09:00,146 | INFO     | pilot.control.job                | validate                  | [job] validate thread has finished
[2023-04-07 09:09:10] 2023-04-07 07:09:00,146 | DEBUG    | pilot.control.payload            | validate_pre              | will not set job_aborted yet
[2023-04-07 09:09:10] 2023-04-07 07:09:00,146 | INFO     | pilot.control.payload            | validate_pre              | [payload] validate_pre thread has finished
[2023-04-07 09:09:10] 2023-04-07 07:09:00,955 | WARNING  | pilot.control.job                | check_job_monitor_waiting_time | no jobs in monitored_payloads queue (waited for 61 s)
[2023-04-07 09:09:10] 2023-04-07 07:09:00,955 | DEBUG    | pilot.control.job                | job_monitor               | will not set job_aborted yet
[2023-04-07 09:09:10] 2023-04-07 07:09:00,956 | INFO     | pilot.control.job                | job_monitor               | [job] job monitor thread has finished
[2023-04-07 09:09:10] 2023-04-07 07:09:01,003 | WARNING  | pilot.util.common                | should_abort              | job:queue_monitor:received graceful stop - abort after this iteration
[2023-04-07 09:09:10] 2023-04-07 07:09:01,003 | DEBUG    | pilot.control.job                | queue_monitor             | will not set job_aborted yet
[2023-04-07 09:09:10] 2023-04-07 07:09:01,003 | INFO     | pilot.control.job                | queue_monitor             | [job] queue monitor thread has finished
[2023-04-07 09:09:10] 2023-04-07 07:09:02,138 | DEBUG    | pilot.control.data               | queue_monitoring          | will not set job_aborted yet
[2023-04-07 09:09:10] 2023-04-07 07:09:02,138 | INFO     | pilot.control.data               | queue_monitoring          | [data] queue_monitor thread has finished
[2023-04-07 09:09:10] 2023-04-07 07:09:10,358 | INFO     | pilot.control.payload            | get_logging_info          | job.realtimelogging is not enabled
[2023-04-07 09:09:10] 2023-04-07 07:09:10,358 | DEBUG    | pilot.control.payload            | run_realtimelog           | real-time logging not needed at this point
[2023-04-07 09:09:10] 2023-04-07 07:09:10,358 | DEBUG    | pilot.control.payload            | run_realtimelog           | realtime logger was not found, waiting ..
[2023-04-07 09:09:10] 2023-04-07 07:09:10,359 | DEBUG    | pilot.control.payload            | run_realtimelog           | will not set job_aborted yet
[2023-04-07 09:09:10] 2023-04-07 07:09:10,359 | INFO     | pilot.control.payload            | run_realtimelog           | [payload] run_realtimelog thread has finished
[2023-04-07 09:09:10] 2023-04-07 07:09:10,800 | DEBUG    | pilot.util.processes             | threads_aborted           | aborting since only the main Pilot thread is still running (total thread count=1 with 0 daemon threa
[2023-04-07 09:09:10] 2023-04-07 07:09:10,800 | DEBUG    | pilot.workflow.generic           | run                       | all relevant threads have aborted (thread count=1)
[2023-04-07 09:09:10] 2023-04-07 07:09:10,801 | INFO     | pilot.workflow.generic           | run                       | end of generic workflow (traces error code: 0)
[2023-04-07 09:09:10] 2023-04-07 07:09:10,801 | INFO     | root                             | wrap_up                   | traces error code: 0
[2023-04-07 09:09:10] 2023-04-07 07:09:10,801 | INFO     | root                             | wrap_up                   | pilot has finished
[2023-04-07 09:09:10] 2023-04-07 07:09:10,846 [wrapper] ==== pilot stdout END ====
[2023-04-07 09:09:10] 2023-04-07 07:09:10,849 [wrapper] ==== wrapper stdout RESUME ====
[2023-04-07 09:09:10] 2023-04-07 07:09:10,853 [wrapper] pilotpid: 1862688
[2023-04-07 09:09:10] 2023-04-07 07:09:10,855 [wrapper] Pilot exit status: 0
[2023-04-07 09:09:10] 2023-04-07 07:09:10,868 [wrapper] pandaids: 5811969980
[2023-04-07 09:09:10] 2023-04-07 07:09:10,875 [wrapper] apfmon messages muted
[2023-04-07 09:09:10] 2023-04-07 07:09:10,878 [wrapper] Test setup, not cleaning
[2023-04-07 09:09:10] 2023-04-07 07:09:10,881 [wrapper] ==== wrapper stdout END ====
[2023-04-07 09:09:10] 2023-04-07 07:09:10,883 [wrapper] ==== wrapper stderr END ====
[2023-04-07 09:09:10] 2023-04-07 07:09:10,889 [wrapper] wrapperexiting ec=0, duration=901
[2023-04-07 09:09:10] 2023-04-07 07:09:10,891 [wrapper] apfmon messages muted
[2023-04-07 09:09:10]  *** Error codes and diagnostics ***
[2023-04-07 09:09:10]     "exeErrorCode": 0,
[2023-04-07 09:09:10]     "exeErrorDiag": "",
[2023-04-07 09:09:10]     "pilotErrorCode": 0,
[2023-04-07 09:09:10]     "pilotErrorDiag": "",
[2023-04-07 09:09:10]  *** Listing of results directory ***
[2023-04-07 09:09:10] insgesamt 45812
[2023-04-07 09:09:10] -rw-r--r-- 1 yeti yeti     4388 Apr  7 08:50 queuedata.json
[2023-04-07 09:09:10] -rwx------ 1 yeti yeti    27540 Apr  7 08:53 runpilot2-wrapper.sh
[2023-04-07 09:09:10] -rw------- 1 yeti yeti   401189 Apr  7 08:53 pilot3.tar.gz
[2023-04-07 09:09:10] -rw-rw-r-- 1 yeti yeti      107 Apr  7 08:54 wrapper_26015_x86_64-pc-linux-gnu
[2023-04-07 09:09:10] -rwxr-xr-x 1 yeti yeti     7986 Apr  7 08:54 run_atlas
[2023-04-07 09:09:10] -rw-rw-r-- 1 yeti yeti      112 Apr  7 08:54 job.xml
[2023-04-07 09:09:10] -rw-r--r-- 2 yeti yeti    17632 Apr  7 08:54 start_atlas.sh
[2023-04-07 09:09:10] drwxrwx--x 2 yeti yeti     4096 Apr  7 08:54 shared
[2023-04-07 09:09:10] -rw-r--r-- 2 yeti yeti   412385 Apr  7 08:54 input.tar.gz
[2023-04-07 09:09:10] -rw-rw-r-- 1 yeti yeti     6447 Apr  7 08:54 init_data.xml
[2023-04-07 09:09:10] -rw-r--r-- 2 yeti yeti 37708683 Apr  7 08:54 EVNT.04972714._000031.pool.root.1
[2023-04-07 09:09:10] -rw-rw-r-- 1 yeti yeti        0 Apr  7 08:54 boinc_lockfile
[2023-04-07 09:09:10] -rw-rw-r-- 1 yeti yeti     2667 Apr  7 08:54 pandaJob.out
[2023-04-07 09:09:10] -rw------- 1 yeti yeti      462 Apr  7 08:54 setup.sh.local
[2023-04-07 09:09:10] -rw------- 1 yeti yeti  1016912 Apr  7 08:54 agis_schedconf.cvmfs.json
[2023-04-07 09:09:10] -rw------- 1 yeti yeti  1431945 Apr  7 08:55 cric_ddmendpoints.json
[2023-04-07 09:09:10] drwx------ 4 yeti yeti     4096 Apr  7 08:56 pilot3
[2023-04-07 09:09:10] -rw-rw-r-- 1 yeti yeti      532 Apr  7 09:01 boinc_task_state.xml
[2023-04-07 09:09:10] -rw------- 1 yeti yeti  2101839 Apr  7 09:02 output.1.518b859d-765b-4d26-adcf-f177b359b73a_43389.pool.root
[2023-04-07 09:09:10] -rw------- 1 yeti yeti     1008 Apr  7 09:02 memory_monitor_summary.json
[2023-04-07 09:09:10] -rw------- 1 yeti yeti   430507 Apr  7 09:06 518b859d-765b-4d26-adcf-f177b359b73a_43389.1.job.log.tgz
[2023-04-07 09:09:10] -rw------- 1 yeti yeti     8308 Apr  7 09:08 heartbeat.json
[2023-04-07 09:09:10] -rw-rw-r-- 1 yeti yeti     8192 Apr  7 09:09 boinc_mmap_file
[2023-04-07 09:09:10] -rw-rw-r-- 1 yeti yeti       24 Apr  7 09:09 wrapper_checkpoint.txt
[2023-04-07 09:09:10] -rw------- 1 yeti yeti     9074 Apr  7 09:09 pilotlog.txt
[2023-04-07 09:09:10] -rw------- 1 yeti yeti   312347 Apr  7 09:09 518b859d-765b-4d26-adcf-f177b359b73a_43389.1.job.log
[2023-04-07 09:09:10] -rw------- 1 yeti yeti      464 Apr  7 09:09 output.list
[2023-04-07 09:09:10] -rw-rw-r-- 1 yeti yeti      748 Apr  7 09:09 runtime_log
[2023-04-07 09:09:10] -rw------- 1 yeti yeti  2867200 Apr  7 09:09 result.tar.gz
[2023-04-07 09:09:10] -rw-rw-r-- 1 yeti yeti    12605 Apr  7 09:09 runtime_log.err
[2023-04-07 09:09:10] -rw------- 1 yeti yeti      621 Apr  7 09:09 b5yKDmM9u42n7Olcko1bjSoqABFKDmABFKDm7AsVDmN2GKDmcoIahm.diag
[2023-04-07 09:09:10] -rw-rw-r-- 1 yeti yeti    30531 Apr  7 09:09 stderr.txt
[2023-04-07 09:09:10] HITS file was successfully produced:
[2023-04-07 09:09:10] -rw------- 1 yeti yeti 2101839 Apr  7 09:02 shared/HITS.pool.root.1
[2023-04-07 09:09:10]  *** Contents of shared directory: ***
[2023-04-07 09:09:10] insgesamt 42108
[2023-04-07 09:09:10] -rw-r--r-- 2 yeti yeti    17632 Apr  7 08:54 start_atlas.sh
[2023-04-07 09:09:10] -rw-r--r-- 2 yeti yeti   412385 Apr  7 08:54 input.tar.gz
[2023-04-07 09:09:10] -rw-r--r-- 2 yeti yeti 37708683 Apr  7 08:54 ATLAS.root_0
[2023-04-07 09:09:10] -rw------- 1 yeti yeti  2101839 Apr  7 09:02 HITS.pool.root.1
[2023-04-07 09:09:10] -rw------- 1 yeti yeti  2867200 Apr  7 09:09 result.tar.gz
09:09:12 (1859460): run_atlas exited; CPU time 463.231563
09:09:12 (1859460): called boinc_finish(0)

</stderr_txt>
]]>


©2024 CERN