Name y3IKDmfV162n7Olcko1bjSoqABFKDmABFKDm7AsVDmUZHKDm0HNQRo_0
Workunit 2299143
Created 13 Apr 2023, 2:05:04 UTC
Sent 13 Apr 2023, 2:05:25 UTC
Report deadline 20 Apr 2023, 2:05:25 UTC
Received 13 Apr 2023, 2:25:45 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 4842
Run time 19 min 2 sec
CPU time 6 min 59 sec
Validate state Valid
Credit 26.21
Device peak FLOPS 2.00 GFLOPS
Application version ATLAS Simulation v3.01 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 1.39 GB
Peak swap size 8.89 GB
Peak disk usage 84.02 MB

Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:05:34 (1622142): wrapper (7.7.26015): starting
04:05:34 (1622142): wrapper: running run_atlas (--nthreads 2)
[2023-04-13 04:05:34] Arguments: --nthreads 2
[2023-04-13 04:05:34] Threads: 2
[2023-04-13 04:05:34] Checking for CVMFS
[2023-04-13 04:05:34] Probing /cvmfs/atlas.cern.ch... OK
[2023-04-13 04:05:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2023-04-13 04:05:34] Running cvmfs_config stat atlas.cern.ch
[2023-04-13 04:05:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2023-04-13 04:05:34] 2.9.4.0 309325 19453 109536 117861 1 73 5869564 10240001 2581 130560 2 82367772 99.964 6558747 2821 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.101:3128 1
[2023-04-13 04:05:34] CVMFS is ok
[2023-04-13 04:05:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2023-04-13 04:05:34] Checking for apptainer binary...
[2023-04-13 04:05:34] Using apptainer found in PATH at /usr/bin/apptainer
[2023-04-13 04:05:34] Running /usr/bin/apptainer --version
[2023-04-13 04:05:34] apptainer version 1.1.0-rc.2
[2023-04-13 04:05:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2023-04-13 04:05:34] ellievl
[2023-04-13 04:05:34] apptainer works
[2023-04-13 04:05:34] Set ATHENA_PROC_NUMBER=2
[2023-04-13 04:05:34] Set ATHENA_CORE_NUMBER=2
[2023-04-13 04:05:34] Starting ATLAS job with PandaID=5817272319
[2023-04-13 04:05:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc_data/boinc-01/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2023-04-13 04:24:33]  *** The last 200 lines of the pilot log: ***
[2023-04-13 04:24:33] 2023-04-13 02:24:19,630 | INFO     | pilot.user.atlas.utilities       | get_memory_values         | using path: /var/lib/boinc_data/boinc-01/slots/3/PanDA_Pilot-5817272319/memory_monitor_summary.json 
[2023-04-13 04:24:33] 2023-04-13 02:24:19,631 | DEBUG    | pilot.user.atlas.utilities       | get_memory_monitor_info   | summary_dictionary={'Avg': {'nprocs': 5.666, 'nthreads': 6.333, 'pss': 998339.0, 'rchar': 181002715.
[2023-04-13 04:24:33] 2023-04-13 02:24:19,631 | INFO     | pilot.user.atlas.utilities       | get_memory_monitor_info   | extracted standard info from prmon json
[2023-04-13 04:24:33] 2023-04-13 02:24:19,631 | INFO     | pilot.user.atlas.utilities       | get_memory_monitor_info   | extracted standard memory fields from prmon json
[2023-04-13 04:24:33] 2023-04-13 02:24:19,631 | INFO     | pilot.util.timing                | timing_report             | ..............................
[2023-04-13 04:24:33] 2023-04-13 02:24:19,631 | INFO     | pilot.util.timing                | timing_report             | . Timing measurements:
[2023-04-13 04:24:33] 2023-04-13 02:24:19,631 | INFO     | pilot.util.timing                | timing_report             | . get job = 46 s
[2023-04-13 04:24:33] 2023-04-13 02:24:19,631 | INFO     | pilot.util.timing                | timing_report             | . initial setup = 84 s
[2023-04-13 04:24:33] 2023-04-13 02:24:19,631 | INFO     | pilot.util.timing                | timing_report             | . payload setup = 23 s
[2023-04-13 04:24:33] 2023-04-13 02:24:19,631 | INFO     | pilot.util.timing                | timing_report             | . stage-in = 57 s
[2023-04-13 04:24:33] 2023-04-13 02:24:19,631 | INFO     | pilot.util.timing                | timing_report             | . payload execution = 540 s
[2023-04-13 04:24:33] 2023-04-13 02:24:19,631 | INFO     | pilot.util.timing                | timing_report             | . stage-out = 334 s
[2023-04-13 04:24:33] 2023-04-13 02:24:19,631 | INFO     | pilot.util.timing                | timing_report             | ..............................
[2023-04-13 04:24:33] 2023-04-13 02:24:19,632 | DEBUG    | pilot.control.job                | send_state                | data={'jobId': '5817272319', 'state': 'finished', 'timestamp': '2023-04-13T04:24:19+01:00', 'siteNam
[2023-04-13 04:24:33] 2023-04-13 02:24:19,632 | DEBUG    | pilot.control.job                | write_heartbeat_to_file   | heartbeat dictionary: {'jobId': '5817272319', 'state': 'finished', 'timestamp': '2023-04-13T04:24:19
[2023-04-13 04:24:33] 2023-04-13 02:24:19,632 | DEBUG    | pilot.control.job                | write_heartbeat_to_file   | wrote heartbeat to file: /var/lib/boinc_data/boinc-01/slots/3/heartbeat.json
[2023-04-13 04:24:33] 2023-04-13 02:24:19,876 | INFO     | pilot.control.job                | make_job_report           | 
[2023-04-13 04:24:33] 2023-04-13 02:24:19,876 | INFO     | pilot.control.job                | make_job_report           | job summary report
[2023-04-13 04:24:33] 2023-04-13 02:24:19,876 | INFO     | pilot.control.job                | make_job_report           | --------------------------------------------------
[2023-04-13 04:24:33] 2023-04-13 02:24:19,876 | INFO     | pilot.control.job                | make_job_report           | PanDA job id: 5817272319
[2023-04-13 04:24:33] 2023-04-13 02:24:19,876 | INFO     | pilot.control.job                | make_job_report           | task id: NULL
[2023-04-13 04:24:33] 2023-04-13 02:24:19,876 | INFO     | pilot.control.job                | make_job_report           | errors: (none)
[2023-04-13 04:24:33] 2023-04-13 02:24:19,876 | INFO     | pilot.control.job                | make_job_report           | status: LOG_TRANSFER = DONE 
[2023-04-13 04:24:33] 2023-04-13 02:24:19,876 | INFO     | pilot.control.job                | make_job_report           | pilot state: finished 
[2023-04-13 04:24:33] 2023-04-13 02:24:19,876 | INFO     | pilot.control.job                | make_job_report           | transexitcode: 0
[2023-04-13 04:24:33] 2023-04-13 02:24:19,876 | INFO     | pilot.control.job                | make_job_report           | exeerrorcode: 0
[2023-04-13 04:24:33] 2023-04-13 02:24:19,876 | INFO     | pilot.control.job                | make_job_report           | exeerrordiag: 
[2023-04-13 04:24:33] 2023-04-13 02:24:19,876 | INFO     | pilot.control.job                | make_job_report           | exitcode: 0
[2023-04-13 04:24:33] 2023-04-13 02:24:19,876 | INFO     | pilot.control.job                | make_job_report           | exitmsg: OK
[2023-04-13 04:24:33] 2023-04-13 02:24:19,877 | INFO     | pilot.control.job                | make_job_report           | cpuconsumptiontime: 505 s
[2023-04-13 04:24:33] 2023-04-13 02:24:19,877 | INFO     | pilot.control.job                | make_job_report           | nevents: 2
[2023-04-13 04:24:33] 2023-04-13 02:24:19,877 | INFO     | pilot.control.job                | make_job_report           | neventsw: 0
[2023-04-13 04:24:33] 2023-04-13 02:24:19,877 | INFO     | pilot.control.job                | make_job_report           | pid: 1629315
[2023-04-13 04:24:33] 2023-04-13 02:24:19,877 | INFO     | pilot.control.job                | make_job_report           | pgrp: 1629315
[2023-04-13 04:24:33] 2023-04-13 02:24:19,877 | INFO     | pilot.control.job                | make_job_report           | corecount: 2
[2023-04-13 04:24:33] 2023-04-13 02:24:19,877 | INFO     | pilot.control.job                | make_job_report           | event service: False
[2023-04-13 04:24:33] 2023-04-13 02:24:19,877 | INFO     | pilot.control.job                | make_job_report           | sizes: {0: 2562862, 1: 2564412, 12: 2564558, 22: 2564586, 33: 2564614, 43: 2564642, 54: 2564798, 58:
[2023-04-13 04:24:33] 2023-04-13 02:24:19,877 | INFO     | pilot.control.job                | make_job_report           | --------------------------------------------------
[2023-04-13 04:24:33] 2023-04-13 02:24:19,877 | INFO     | pilot.control.job                | make_job_report           | 
[2023-04-13 04:24:33] 2023-04-13 02:24:19,877 | DEBUG    | pilot.control.job                | has_job_completed         | ls -lF /var/lib/boinc_data/boinc-01/slots/3:
[2023-04-13 04:24:33] 
[2023-04-13 04:24:33] 2023-04-13 02:24:19,877 | INFO     | pilot.util.container             | print_executable          | executing command: ls -lF /var/lib/boinc_data/boinc-01/slots/3
[2023-04-13 04:24:33] 2023-04-13 02:24:19,938 | DEBUG    | pilot.control.job                | has_job_completed         | total 43312
[2023-04-13 04:24:33] -rw------- 1 yeti yeti   308461 Apr 13 04:24 6e5f8ad5-bc70-4bcf-b86e-20c67777a461_49801.1.job.log
[2023-04-13 04:24:33] -rw------- 1 yeti yeti   438860 Apr 13 04:21 6e5f8ad5-bc70-4bcf-b86e-20c67777a461_49801.1.job.log.tgz
[2023-04-13 04:24:33] -rw-r--r-- 2 yeti yeti 38019645 Apr 13 04:05 EVNT.04972714._000023.pool.root.1
[2023-04-13 04:24:33] drwxrwx--- 3 yeti yeti     4096 Apr 13 04:24 PanDA_Pilot-5817272319/
[2023-04-13 04:24:33] -rw------- 1 yeti yeti  1013950 Apr 13 04:07 agis_schedconf.cvmfs.json
[2023-04-13 04:24:33] -rw-rw-r-- 1 yeti yeti        0 Apr 13 04:05 boinc_lockfile
[2023-04-13 04:24:33] -rw-rw-r-- 1 yeti yeti     8192 Apr 13 04:24 boinc_mmap_file
[2023-04-13 04:24:33] -rw-rw-r-- 1 yeti yeti      532 Apr 13 04:15 boinc_task_state.xml
[2023-04-13 04:24:33] -rw------- 1 yeti yeti  1440294 Apr 13 04:07 cric_ddmendpoints.json
[2023-04-13 04:24:33] -rw------- 1 yeti yeti     7733 Apr 13 04:24 heartbeat.json
[2023-04-13 04:24:33] -rw-rw-r-- 1 yeti yeti     6443 Apr 13 04:05 init_data.xml
[2023-04-13 04:24:33] -rw-r--r-- 2 yeti yeti   414763 Apr 13 04:05 input.tar.gz
[2023-04-13 04:24:33] -rw-rw-r-- 1 yeti yeti      112 Apr 13 04:05 job.xml
[2023-04-13 04:24:33] -rw------- 1 yeti yeti     1001 Apr 13 04:18 memory_monitor_summary.json
[2023-04-13 04:24:33] -rw------- 1 yeti yeti  1827274 Apr 13 04:18 output.1.6e5f8ad5-bc70-4bcf-b86e-20c67777a461_49801.pool.root
[2023-04-13 04:24:33] -rw------- 1 yeti yeti      464 Apr 13 04:24 output.list
[2023-04-13 04:24:33] -rw-rw-r-- 1 yeti yeti     2657 Apr 13 04:05 pandaJob.out
[2023-04-13 04:24:33] drwx------ 4 yeti yeti     4096 Apr 13 04:08 pilot3/
[2023-04-13 04:24:33] -rw-r--r-- 1 yeti yeti   403260 Apr 13 04:04 pilot3.tar.gz
[2023-04-13 04:24:33] -rw------- 1 yeti yeti   294951 Apr 13 04:24 pilotlog.txt
[2023-04-13 04:24:33] -rw-r--r-- 1 yeti yeti     4388 Apr 13 04:02 queuedata.json
[2023-04-13 04:24:33] -rwxr-xr-x 1 yeti yeti     7986 Apr 13 04:05 run_atlas*
[2023-04-13 04:24:33] -rwx------ 1 yeti yeti    27540 Apr 13 04:04 runpilot2-wrapper.sh*
[2023-04-13 04:24:33] -rw-rw-r-- 1 yeti yeti      407 Apr 13 04:05 runtime_log
[2023-04-13 04:24:33] -rw-rw-r-- 1 yeti yeti     7967 Apr 13 04:05 runtime_log.err
[2023-04-13 04:24:33] -rw------- 1 yeti yeti      424 Apr 13 04:05 setup.sh.local
[2023-04-13 04:24:33] drwxrwx--x 2 yeti yeti     4096 Apr 13 04:05 shared/
[2023-04-13 04:24:33] -rw-r--r-- 2 yeti yeti    17632 Apr 13 04:05 start_atlas.sh
[2023-04-13 04:24:33] -rw-rw-r-- 1 yeti yeti     1768 Apr 13 04:05 stderr.txt
[2023-04-13 04:24:33] -rw-rw-r-- 1 yeti yeti      107 Apr 13 04:05 wrapper_26015_x86_64-pc-linux-gnu
[2023-04-13 04:24:33] -rw-rw-r-- 1 yeti yeti       25 Apr 13 04:24 wrapper_checkpoint.txt
[2023-04-13 04:24:33] -rw------- 1 yeti yeti      143 Apr 13 04:05 y3IKDmfV162n7Olcko1bjSoqABFKDmABFKDm7AsVDmUZHKDm0HNQRo.diag
[2023-04-13 04:24:33] 2023-04-13 02:24:19,939 | INFO     | pilot.util.queuehandling         | queue_report              | queue jobs had 0 job(s) [purged]
[2023-04-13 04:24:33] 2023-04-13 02:24:19,939 | INFO     | pilot.util.queuehandling         | queue_report              | queue payloads had 0 job(s) [purged]
[2023-04-13 04:24:33] 2023-04-13 02:24:19,939 | INFO     | pilot.util.queuehandling         | queue_report              | queue data_in had 0 job(s) [purged]
[2023-04-13 04:24:33] 2023-04-13 02:24:19,939 | INFO     | pilot.util.queuehandling         | queue_report              | queue data_out had 0 job(s) [purged]
[2023-04-13 04:24:33] 2023-04-13 02:24:19,939 | INFO     | pilot.util.queuehandling         | queue_report              | queue current_data_in had 0 job(s) [purged]
[2023-04-13 04:24:33] 2023-04-13 02:24:19,939 | INFO     | pilot.util.queuehandling         | queue_report              | queue validated_jobs had 0 job(s) [purged]
[2023-04-13 04:24:33] 2023-04-13 02:24:19,939 | INFO     | pilot.util.queuehandling         | queue_report              | queue validated_payloads had 0 job(s) [purged]
[2023-04-13 04:24:33] 2023-04-13 02:24:19,939 | INFO     | pilot.util.queuehandling         | queue_report              | queue monitored_payloads had 0 job(s) [purged]
[2023-04-13 04:24:33] 2023-04-13 02:24:19,939 | INFO     | pilot.util.queuehandling         | queue_report              | queue finished_jobs had 0 job(s) [purged]
[2023-04-13 04:24:33] 2023-04-13 02:24:19,939 | INFO     | pilot.util.queuehandling         | queue_report              | queue finished_payloads had 0 job(s) [purged]
[2023-04-13 04:24:33] 2023-04-13 02:24:19,939 | INFO     | pilot.util.queuehandling         | queue_report              | queue finished_data_in had 1 job(s) [purged]
[2023-04-13 04:24:33] 2023-04-13 02:24:19,939 | INFO     | pilot.util.queuehandling         | queue_report              | queue finished_data_out had 0 job(s) [purged]
[2023-04-13 04:24:33] 2023-04-13 02:24:19,939 | INFO     | pilot.util.queuehandling         | queue_report              | queue failed_jobs had 0 job(s) [purged]
[2023-04-13 04:24:33] 2023-04-13 02:24:19,939 | INFO     | pilot.util.queuehandling         | queue_report              | queue failed_payloads had 0 job(s) [purged]
[2023-04-13 04:24:33] 2023-04-13 02:24:19,939 | INFO     | pilot.util.queuehandling         | queue_report              | queue failed_data_in had 0 job(s) [purged]
[2023-04-13 04:24:33] 2023-04-13 02:24:19,939 | INFO     | pilot.util.queuehandling         | queue_report              | queue failed_data_out had 0 job(s) [purged]
[2023-04-13 04:24:33] 2023-04-13 02:24:19,939 | INFO     | pilot.util.queuehandling         | queue_report              | queue completed_jobs had 0 job(s) [purged]
[2023-04-13 04:24:33] 2023-04-13 02:24:19,939 | INFO     | pilot.util.queuehandling         | queue_report              | queue completed_jobids has 1 job(s)
[2023-04-13 04:24:33] 2023-04-13 02:24:19,939 | INFO     | pilot.util.queuehandling         | queue_report              | queue realtimelog_payloads had 0 job(s) [purged]
[2023-04-13 04:24:33] 2023-04-13 02:24:19,939 | INFO     | pilot.util.queuehandling         | queue_report              | queue messages had 0 job(s) [purged]
[2023-04-13 04:24:33] 2023-04-13 02:24:19,939 | INFO     | pilot.control.job                | has_job_completed         | job 5817272319 has completed (purged errors)
[2023-04-13 04:24:33] 2023-04-13 02:24:19,939 | DEBUG    | pilot.util.realtimelogger        | cleanup                   | attempting real-time logger cleanup
[2023-04-13 04:24:33] 2023-04-13 02:24:19,939 | INFO     | pilot.util.processes             | cleanup                   | overall cleanup function is called
[2023-04-13 04:24:33] 2023-04-13 02:24:19,942 | DEBUG    | pilot.util.processes             | cleanup                   | work directory was removed: /var/lib/boinc_data/boinc-01/slots/3/PanDA_Pilot-5817272319
[2023-04-13 04:24:33] 2023-04-13 02:24:20,947 | INFO     | pilot.info.jobdata               | collect_zombies           | --- collectZombieJob: --- 10, [1629315]
[2023-04-13 04:24:33] 2023-04-13 02:24:20,947 | INFO     | pilot.info.jobdata               | collect_zombies           | zombie collector trying to kill pid 1629315
[2023-04-13 04:24:33] 2023-04-13 02:24:20,948 | INFO     | pilot.info.jobdata               | collect_zombies           | harmless exception when collecting zombies: [Errno 10] No child processes
[2023-04-13 04:24:33] 2023-04-13 02:24:21,546 | WARNING  | pilot.control.monitor            | get_max_running_time      | queuedata could not be extracted from queues, will use default for max running time (324000s)
[2023-04-13 04:24:33] 2023-04-13 02:24:21,953 | INFO     | pilot.util.processes             | cleanup                   | collected zombie processes
[2023-04-13 04:24:33] 2023-04-13 02:24:21,953 | INFO     | pilot.util.processes             | cleanup                   | will now attempt to kill all subprocesses of pid=1629315
[2023-04-13 04:24:33] 2023-04-13 02:24:22,031 | INFO     | pilot.util.processes             | kill_processes            | process IDs to be killed: [1629315] (in reverse order)
[2023-04-13 04:24:33] 2023-04-13 02:24:22,111 | WARNING  | pilot.util.processes             | kill_processes            | found no corresponding commands to process id(s)
[2023-04-13 04:24:33] 2023-04-13 02:24:22,111 | INFO     | pilot.util.processes             | kill_orphans              | Do not look for orphan processes in BOINC jobs
[2023-04-13 04:24:33] 2023-04-13 02:24:22,111 | DEBUG    | pilot.util.queuehandling         | purge_queue               | queue purged
[2023-04-13 04:24:33] 2023-04-13 02:24:22,111 | INFO     | pilot.control.job                | retrieve                  | ready for new job
[2023-04-13 04:24:33] 2023-04-13 02:24:22,111 | INFO     | root                             | retrieve                  | pilot has finished with previous job - re-establishing logging
[2023-04-13 04:24:33] 2023-04-13 02:24:22,112 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | ****************************************
[2023-04-13 04:24:33] 2023-04-13 02:24:22,112 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | ***  PanDA Pilot version 3.6.0 (51)  ***
[2023-04-13 04:24:33] 2023-04-13 02:24:22,112 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | ****************************************
[2023-04-13 04:24:33] 2023-04-13 02:24:22,112 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | 
[2023-04-13 04:24:33] 2023-04-13 02:24:22,112 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | pilot is running in a VM
[2023-04-13 04:24:33] 2023-04-13 02:24:22,112 | INFO     | pilot.util.auxiliary             | display_architecture_info | architecture information:
[2023-04-13 04:24:33] 2023-04-13 02:24:22,112 | INFO     | pilot.util.container             | print_executable          | executing command: cat /etc/os-release
[2023-04-13 04:24:33] 2023-04-13 02:24:22,162 | INFO     | pilot.util.filehandling          | dump                      | cat /etc/os-release:
[2023-04-13 04:24:33] NAME="CentOS Linux"
[2023-04-13 04:24:33] VERSION="7 (Core)"
[2023-04-13 04:24:33] ID="centos"
[2023-04-13 04:24:33] ID_LIKE="rhel fedora"
[2023-04-13 04:24:33] VERSION_ID="7"
[2023-04-13 04:24:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2023-04-13 04:24:33] ANSI_COLOR="0;31"
[2023-04-13 04:24:33] CPE_NAME="cpe:/o:centos:centos:7"
[2023-04-13 04:24:33] HOME_URL="https://www.centos.org/"
[2023-04-13 04:24:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2023-04-13 04:24:33] 
[2023-04-13 04:24:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2023-04-13 04:24:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2023-04-13 04:24:33] REDHAT_SUPPORT_PRODUCT="centos"
[2023-04-13 04:24:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2023-04-13 04:24:33] 
[2023-04-13 04:24:33] 2023-04-13 02:24:22,162 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | ****************************************
[2023-04-13 04:24:33] 2023-04-13 02:24:22,666 | DEBUG    | pilot.util.monitoring            | check_local_space         | checking local space on /var/lib/boinc_data/boinc-01/slots/3
[2023-04-13 04:24:33] 2023-04-13 02:24:22,666 | INFO     | pilot.util.container             | print_executable          | executing command: df -mP /var/lib/boinc_data/boinc-01/slots/3
[2023-04-13 04:24:33] 2023-04-13 02:24:22,709 | DEBUG    | pilot.util.workernode            | get_local_disk_space      | stdout=Filesystem     1048576-blocks  Used Available Capacity Mounted on
[2023-04-13 04:24:33] /dev/sda5               62572 32246     27116      55% /var/lib/boinc_data/boinc-01/slots/3
[2023-04-13 04:24:33] 2023-04-13 02:24:22,709 | DEBUG    | pilot.util.workernode            | get_local_disk_space      | stderr=
[2023-04-13 04:24:33] 2023-04-13 02:24:22,709 | INFO     | pilot.util.monitoring            | check_local_space         | sufficient remaining disk space (28433186816 B)
[2023-04-13 04:24:33] 2023-04-13 02:24:22,709 | WARNING  | pilot.control.job                | proceed_with_getjob       | since timefloor is set to 0, pilot was only allowed to run one job
[2023-04-13 04:24:33] 2023-04-13 02:24:22,709 | DEBUG    | pilot.control.job                | retrieve                  | will not set job_aborted yet
[2023-04-13 04:24:33] 2023-04-13 02:24:22,709 | INFO     | pilot.control.job                | retrieve                  | [job] retrieve thread has finished
[2023-04-13 04:24:33] 2023-04-13 02:24:22,710 | WARNING  | pilot.control.monitor            | control                   | aborting monitor loop since graceful_stop has been set
[2023-04-13 04:24:33] 2023-04-13 02:24:22,710 | INFO     | pilot.control.monitor            | control                   | [monitor] control thread has ended
[2023-04-13 04:24:33] 2023-04-13 02:24:22,859 | WARNING  | pilot.util.common                | should_abort              | data:copytool_out:received graceful stop - abort after this iteration
[2023-04-13 04:24:33] 2023-04-13 02:24:23,001 | DEBUG    | pilot.control.payload            | execute_payloads          | will not set job_aborted yet
[2023-04-13 04:24:33] 2023-04-13 02:24:23,001 | INFO     | pilot.control.payload            | execute_payloads          | [payload] execute_payloads thread has finished
[2023-04-13 04:24:33] 2023-04-13 02:24:23,284 | DEBUG    | pilot.control.job                | create_data_payload       | will not set job_aborted yet
[2023-04-13 04:24:33] 2023-04-13 02:24:23,284 | INFO     | pilot.control.job                | create_data_payload       | [job] create_data_payload thread has finished
[2023-04-13 04:24:33] 2023-04-13 02:24:23,377 | DEBUG    | pilot.control.payload            | validate_pre              | will not set job_aborted yet
[2023-04-13 04:24:33] 2023-04-13 02:24:23,377 | INFO     | pilot.control.payload            | validate_pre              | [payload] validate_pre thread has finished
[2023-04-13 04:24:33] 2023-04-13 02:24:23,423 | DEBUG    | pilot.control.job                | validate                  | will not set job_aborted yet
[2023-04-13 04:24:33] 2023-04-13 02:24:23,423 | INFO     | pilot.control.job                | validate                  | [job] validate thread has finished
[2023-04-13 04:24:33] 2023-04-13 02:24:23,570 | DEBUG    | pilot.control.payload            | validate_post             | will not set job_aborted yet
[2023-04-13 04:24:33] 2023-04-13 02:24:23,570 | INFO     | pilot.control.payload            | validate_post             | [payload] validate_post thread has finished
[2023-04-13 04:24:33] 2023-04-13 02:24:23,656 | DEBUG    | pilot.control.data               | control                   | data control ending since graceful_stop has been set
[2023-04-13 04:24:33] 2023-04-13 02:24:23,657 | DEBUG    | pilot.control.data               | control                   | will not set job_aborted yet
[2023-04-13 04:24:33] 2023-04-13 02:24:23,657 | INFO     | pilot.control.data               | control                   | [data] control thread has finished
[2023-04-13 04:24:33] 2023-04-13 02:24:23,693 | DEBUG    | pilot.control.data               | copytool_in               | will not set job_aborted yet
[2023-04-13 04:24:33] 2023-04-13 02:24:23,694 | INFO     | pilot.control.data               | copytool_in               | [data] copytool_in thread has finished
[2023-04-13 04:24:33] 2023-04-13 02:24:23,767 | DEBUG    | pilot.control.payload            | failed_post               | will not set job_aborted yet
[2023-04-13 04:24:33] 2023-04-13 02:24:23,768 | INFO     | pilot.control.payload            | failed_post               | [payload] failed_post thread has finished
[2023-04-13 04:24:33] 2023-04-13 02:24:23,846 | DEBUG    | pilot.control.payload            | control                   | payload control ending since graceful_stop has been set
[2023-04-13 04:24:33] 2023-04-13 02:24:23,847 | DEBUG    | pilot.control.payload            | control                   | will not set job_aborted yet
[2023-04-13 04:24:33] 2023-04-13 02:24:23,847 | INFO     | pilot.control.payload            | control                   | [payload] control thread has finished
[2023-04-13 04:24:33] 2023-04-13 02:24:23,860 | DEBUG    | pilot.control.data               | copytool_out              | will not set job_aborted yet
[2023-04-13 04:24:33] 2023-04-13 02:24:23,860 | INFO     | pilot.control.data               | copytool_out              | [data] copytool_out thread has finished
[2023-04-13 04:24:33] 2023-04-13 02:24:23,860 | DEBUG    | pilot.control.job                | control                   | job control ending since graceful_stop has been set
[2023-04-13 04:24:33] 2023-04-13 02:24:23,861 | DEBUG    | pilot.control.job                | control                   | will not set job_aborted yet
[2023-04-13 04:24:33] 2023-04-13 02:24:23,861 | INFO     | pilot.control.job                | control                   | [job] control thread has finished
[2023-04-13 04:24:33] 2023-04-13 02:24:24,039 | WARNING  | pilot.util.common                | should_abort              | data:queue_monitoring:received graceful stop - abort after this iteration
[2023-04-13 04:24:33] 2023-04-13 02:24:24,698 | WARNING  | pilot.util.common                | should_abort              | job:queue_monitor:received graceful stop - abort after this iteration
[2023-04-13 04:24:33] 2023-04-13 02:24:24,698 | DEBUG    | pilot.control.job                | queue_monitor             | will not set job_aborted yet
[2023-04-13 04:24:33] 2023-04-13 02:24:24,698 | INFO     | pilot.control.job                | queue_monitor             | [job] queue monitor thread has finished
[2023-04-13 04:24:33] 2023-04-13 02:24:27,040 | DEBUG    | pilot.control.data               | queue_monitoring          | will not set job_aborted yet
[2023-04-13 04:24:33] 2023-04-13 02:24:27,041 | INFO     | pilot.control.data               | queue_monitoring          | [data] queue_monitor thread has finished
[2023-04-13 04:24:33] 2023-04-13 02:24:33,029 | INFO     | pilot.control.payload            | get_logging_info          | job.realtimelogging is not enabled
[2023-04-13 04:24:33] 2023-04-13 02:24:33,030 | DEBUG    | pilot.control.payload            | run_realtimelog           | real-time logging not needed at this point
[2023-04-13 04:24:33] 2023-04-13 02:24:33,030 | DEBUG    | pilot.control.payload            | run_realtimelog           | realtime logger was not found, waiting ..
[2023-04-13 04:24:33] 2023-04-13 02:24:33,030 | DEBUG    | pilot.control.payload            | run_realtimelog           | will not set job_aborted yet
[2023-04-13 04:24:33] 2023-04-13 02:24:33,030 | INFO     | pilot.control.payload            | run_realtimelog           | [payload] run_realtimelog thread has finished
[2023-04-13 04:24:33] 2023-04-13 02:24:33,145 | DEBUG    | pilot.util.processes             | threads_aborted           | aborting since only the main Pilot thread is still running (total thread count=1 with 0 daemon threa
[2023-04-13 04:24:33] 2023-04-13 02:24:33,145 | DEBUG    | pilot.workflow.generic           | run                       | all relevant threads have aborted (thread count=1)
[2023-04-13 04:24:33] 2023-04-13 02:24:33,145 | INFO     | pilot.workflow.generic           | run                       | end of generic workflow (traces error code: 0)
[2023-04-13 04:24:33] 2023-04-13 02:24:33,145 | INFO     | root                             | wrap_up                   | traces error code: 0
[2023-04-13 04:24:33] 2023-04-13 02:24:33,145 | INFO     | root                             | wrap_up                   | pilot has finished
[2023-04-13 04:24:33] 2023-04-13 02:24:33,211 [wrapper] ==== pilot stdout END ====
[2023-04-13 04:24:33] 2023-04-13 02:24:33,233 [wrapper] ==== wrapper stdout RESUME ====
[2023-04-13 04:24:33] 2023-04-13 02:24:33,252 [wrapper] pilotpid: 1625734
[2023-04-13 04:24:33] 2023-04-13 02:24:33,275 [wrapper] Pilot exit status: 0
[2023-04-13 04:24:33] 2023-04-13 02:24:33,338 [wrapper] pandaids: 5817272319
[2023-04-13 04:24:33] 2023-04-13 02:24:33,379 [wrapper] apfmon messages muted
[2023-04-13 04:24:33] 2023-04-13 02:24:33,400 [wrapper] Test setup, not cleaning
[2023-04-13 04:24:33] 2023-04-13 02:24:33,417 [wrapper] ==== wrapper stdout END ====
[2023-04-13 04:24:33] 2023-04-13 02:24:33,434 [wrapper] ==== wrapper stderr END ====
[2023-04-13 04:24:33] 2023-04-13 02:24:33,473 [wrapper] wrapperexiting ec=0, duration=1138
[2023-04-13 04:24:33] 2023-04-13 02:24:33,494 [wrapper] apfmon messages muted
[2023-04-13 04:24:33]  *** Error codes and diagnostics ***
[2023-04-13 04:24:33]     "exeErrorCode": 0,
[2023-04-13 04:24:33]     "exeErrorDiag": "",
[2023-04-13 04:24:33]     "pilotErrorCode": 0,
[2023-04-13 04:24:33]     "pilotErrorDiag": "",
[2023-04-13 04:24:33]  *** Listing of results directory ***
[2023-04-13 04:24:33] insgesamt 45624
[2023-04-13 04:24:33] -rw-r--r-- 1 yeti yeti     4388 Apr 13 04:02 queuedata.json
[2023-04-13 04:24:33] -rwx------ 1 yeti yeti    27540 Apr 13 04:04 runpilot2-wrapper.sh
[2023-04-13 04:24:33] -rw-r--r-- 1 yeti yeti   403260 Apr 13 04:04 pilot3.tar.gz
[2023-04-13 04:24:33] -rw-rw-r-- 1 yeti yeti      107 Apr 13 04:05 wrapper_26015_x86_64-pc-linux-gnu
[2023-04-13 04:24:33] -rwxr-xr-x 1 yeti yeti     7986 Apr 13 04:05 run_atlas
[2023-04-13 04:24:33] -rw-rw-r-- 1 yeti yeti      112 Apr 13 04:05 job.xml
[2023-04-13 04:24:33] -rw-r--r-- 2 yeti yeti    17632 Apr 13 04:05 start_atlas.sh
[2023-04-13 04:24:33] drwxrwx--x 2 yeti yeti     4096 Apr 13 04:05 shared
[2023-04-13 04:24:33] -rw-r--r-- 2 yeti yeti   414763 Apr 13 04:05 input.tar.gz
[2023-04-13 04:24:33] -rw-rw-r-- 1 yeti yeti     6443 Apr 13 04:05 init_data.xml
[2023-04-13 04:24:33] -rw-r--r-- 2 yeti yeti 38019645 Apr 13 04:05 EVNT.04972714._000023.pool.root.1
[2023-04-13 04:24:33] -rw-rw-r-- 1 yeti yeti        0 Apr 13 04:05 boinc_lockfile
[2023-04-13 04:24:33] -rw-rw-r-- 1 yeti yeti     2657 Apr 13 04:05 pandaJob.out
[2023-04-13 04:24:33] -rw------- 1 yeti yeti      424 Apr 13 04:05 setup.sh.local
[2023-04-13 04:24:33] -rw------- 1 yeti yeti  1440294 Apr 13 04:07 cric_ddmendpoints.json
[2023-04-13 04:24:33] -rw------- 1 yeti yeti  1013950 Apr 13 04:07 agis_schedconf.cvmfs.json
[2023-04-13 04:24:33] drwx------ 4 yeti yeti     4096 Apr 13 04:08 pilot3
[2023-04-13 04:24:33] -rw-rw-r-- 1 yeti yeti      532 Apr 13 04:15 boinc_task_state.xml
[2023-04-13 04:24:33] -rw------- 1 yeti yeti  1827274 Apr 13 04:18 output.1.6e5f8ad5-bc70-4bcf-b86e-20c67777a461_49801.pool.root
[2023-04-13 04:24:33] -rw------- 1 yeti yeti     1001 Apr 13 04:18 memory_monitor_summary.json
[2023-04-13 04:24:33] -rw------- 1 yeti yeti   438860 Apr 13 04:21 6e5f8ad5-bc70-4bcf-b86e-20c67777a461_49801.1.job.log.tgz
[2023-04-13 04:24:33] -rw------- 1 yeti yeti     7733 Apr 13 04:24 heartbeat.json
[2023-04-13 04:24:33] -rw-rw-r-- 1 yeti yeti       25 Apr 13 04:24 wrapper_checkpoint.txt
[2023-04-13 04:24:33] -rw-rw-r-- 1 yeti yeti     8192 Apr 13 04:24 boinc_mmap_file
[2023-04-13 04:24:33] -rw------- 1 yeti yeti     9049 Apr 13 04:24 pilotlog.txt
[2023-04-13 04:24:33] -rw------- 1 yeti yeti   325652 Apr 13 04:24 6e5f8ad5-bc70-4bcf-b86e-20c67777a461_49801.1.job.log
[2023-04-13 04:24:33] -rw------- 1 yeti yeti      464 Apr 13 04:24 output.list
[2023-04-13 04:24:33] -rw-rw-r-- 1 yeti yeti      748 Apr 13 04:24 runtime_log
[2023-04-13 04:24:33] -rw------- 1 yeti yeti  2611200 Apr 13 04:24 result.tar.gz
[2023-04-13 04:24:33] -rw------- 1 yeti yeti      623 Apr 13 04:24 y3IKDmfV162n7Olcko1bjSoqABFKDmABFKDm7AsVDmUZHKDm0HNQRo.diag
[2023-04-13 04:24:33] -rw-rw-r-- 1 yeti yeti    12223 Apr 13 04:24 runtime_log.err
[2023-04-13 04:24:33] -rw-rw-r-- 1 yeti yeti    29233 Apr 13 04:24 stderr.txt
[2023-04-13 04:24:33] HITS file was successfully produced:
[2023-04-13 04:24:33] -rw------- 1 yeti yeti 1827274 Apr 13 04:18 shared/HITS.pool.root.1
[2023-04-13 04:24:33]  *** Contents of shared directory: ***
[2023-04-13 04:24:33] insgesamt 41900
[2023-04-13 04:24:33] -rw-r--r-- 2 yeti yeti    17632 Apr 13 04:05 start_atlas.sh
[2023-04-13 04:24:33] -rw-r--r-- 2 yeti yeti   414763 Apr 13 04:05 input.tar.gz
[2023-04-13 04:24:33] -rw-r--r-- 2 yeti yeti 38019645 Apr 13 04:05 ATLAS.root_0
[2023-04-13 04:24:33] -rw------- 1 yeti yeti  1827274 Apr 13 04:18 HITS.pool.root.1
[2023-04-13 04:24:33] -rw------- 1 yeti yeti  2611200 Apr 13 04:24 result.tar.gz
04:24:35 (1622142): run_atlas exited; CPU time 419.704904
04:24:35 (1622142): called boinc_finish(0)

</stderr_txt>
]]>


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