Name rbAMDmLg262n7Olcko1bjSoqABFKDmABFKDm7AsVDmsZHKDmKzvHIn_0
Workunit 2299160
Created 13 Apr 2023, 3:20:11 UTC
Sent 13 Apr 2023, 3:21:00 UTC
Report deadline 20 Apr 2023, 3:21:00 UTC
Received 13 Apr 2023, 3:43:31 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 4842
Run time 21 min 57 sec
CPU time 6 min 32 sec
Validate state Valid
Credit 30.32
Device peak FLOPS 2.00 GFLOPS
Application version ATLAS Simulation v3.01 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 1.41 GB
Peak swap size 2.12 GB
Peak disk usage 82.91 MB

Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:21:09 (1686329): wrapper (7.7.26015): starting
05:21:09 (1686329): wrapper: running run_atlas (--nthreads 2)
[2023-04-13 05:21:09] Arguments: --nthreads 2
[2023-04-13 05:21:09] Threads: 2
[2023-04-13 05:21:09] Checking for CVMFS
[2023-04-13 05:21:09] Probing /cvmfs/atlas.cern.ch... OK
[2023-04-13 05:21:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2023-04-13 05:21:09] Running cvmfs_config stat atlas.cern.ch
[2023-04-13 05:21:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2023-04-13 05:21:09] 2.9.4.0 309325 19528 109548 117865 2 9 5920279 10240000 2700 130560 2 82683761 99.964 6580427 2829 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.101:3128 1
[2023-04-13 05:21:09] CVMFS is ok
[2023-04-13 05:21:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2023-04-13 05:21:09] Checking for apptainer binary...
[2023-04-13 05:21:09] Using apptainer found in PATH at /usr/bin/apptainer
[2023-04-13 05:21:09] Running /usr/bin/apptainer --version
[2023-04-13 05:21:09] apptainer version 1.1.0-rc.2
[2023-04-13 05:21:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2023-04-13 05:21:09] ellievl
[2023-04-13 05:21:09] apptainer works
[2023-04-13 05:21:09] Set ATHENA_PROC_NUMBER=2
[2023-04-13 05:21:09] Set ATHENA_CORE_NUMBER=2
[2023-04-13 05:21:09] Starting ATLAS job with PandaID=5817333075
[2023-04-13 05:21:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc_data/boinc-01/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2023-04-13 05:43:04]  *** The last 200 lines of the pilot log: ***
[2023-04-13 05:43:04] 2023-04-13 03:42:49,748 | INFO     | pilot.user.atlas.utilities       | get_memory_values         | using path: /var/lib/boinc_data/boinc-01/slots/3/PanDA_Pilot-5817333075/memory_monitor_summary.json 
[2023-04-13 05:43:04] 2023-04-13 03:42:49,749 | DEBUG    | pilot.user.atlas.utilities       | get_memory_monitor_info   | summary_dictionary={'Avg': {'nprocs': 4.909, 'nthreads': 5.545, 'pss': 901120.0, 'rchar': 147644220.
[2023-04-13 05:43:04] 2023-04-13 03:42:49,749 | INFO     | pilot.user.atlas.utilities       | get_memory_monitor_info   | extracted standard info from prmon json
[2023-04-13 05:43:04] 2023-04-13 03:42:49,749 | INFO     | pilot.user.atlas.utilities       | get_memory_monitor_info   | extracted standard memory fields from prmon json
[2023-04-13 05:43:04] 2023-04-13 03:42:49,749 | INFO     | pilot.util.timing                | timing_report             | ..............................
[2023-04-13 05:43:04] 2023-04-13 03:42:49,749 | INFO     | pilot.util.timing                | timing_report             | . Timing measurements:
[2023-04-13 05:43:04] 2023-04-13 03:42:49,749 | INFO     | pilot.util.timing                | timing_report             | . get job = 85 s
[2023-04-13 05:43:04] 2023-04-13 03:42:49,750 | INFO     | pilot.util.timing                | timing_report             | . initial setup = 48 s
[2023-04-13 05:43:04] 2023-04-13 03:42:49,750 | INFO     | pilot.util.timing                | timing_report             | . payload setup = 23 s
[2023-04-13 05:43:04] 2023-04-13 03:42:49,750 | INFO     | pilot.util.timing                | timing_report             | . stage-in = 51 s
[2023-04-13 05:43:04] 2023-04-13 03:42:49,750 | INFO     | pilot.util.timing                | timing_report             | . payload execution = 631 s
[2023-04-13 05:43:04] 2023-04-13 03:42:49,750 | INFO     | pilot.util.timing                | timing_report             | . stage-out = 424 s
[2023-04-13 05:43:04] 2023-04-13 03:42:49,750 | INFO     | pilot.util.timing                | timing_report             | ..............................
[2023-04-13 05:43:04] 2023-04-13 03:42:49,750 | DEBUG    | pilot.control.job                | send_state                | data={'jobId': '5817333075', 'state': 'finished', 'timestamp': '2023-04-13T05:42:49+01:00', 'siteNam
[2023-04-13 05:43:04] 2023-04-13 03:42:49,751 | DEBUG    | pilot.control.job                | write_heartbeat_to_file   | heartbeat dictionary: {'jobId': '5817333075', 'state': 'finished', 'timestamp': '2023-04-13T05:42:49
[2023-04-13 05:43:04] 2023-04-13 03:42:49,751 | DEBUG    | pilot.control.job                | write_heartbeat_to_file   | wrote heartbeat to file: /var/lib/boinc_data/boinc-01/slots/3/heartbeat.json
[2023-04-13 05:43:04] 2023-04-13 03:42:49,809 | INFO     | pilot.control.job                | make_job_report           | 
[2023-04-13 05:43:04] 2023-04-13 03:42:49,809 | INFO     | pilot.control.job                | make_job_report           | job summary report
[2023-04-13 05:43:04] 2023-04-13 03:42:49,809 | INFO     | pilot.control.job                | make_job_report           | --------------------------------------------------
[2023-04-13 05:43:04] 2023-04-13 03:42:49,809 | INFO     | pilot.control.job                | make_job_report           | PanDA job id: 5817333075
[2023-04-13 05:43:04] 2023-04-13 03:42:49,809 | INFO     | pilot.control.job                | make_job_report           | task id: NULL
[2023-04-13 05:43:04] 2023-04-13 03:42:49,809 | INFO     | pilot.control.job                | make_job_report           | errors: (none)
[2023-04-13 05:43:04] 2023-04-13 03:42:49,809 | INFO     | pilot.control.job                | make_job_report           | status: LOG_TRANSFER = DONE 
[2023-04-13 05:43:04] 2023-04-13 03:42:49,809 | INFO     | pilot.control.job                | make_job_report           | pilot state: finished 
[2023-04-13 05:43:04] 2023-04-13 03:42:49,809 | INFO     | pilot.control.job                | make_job_report           | transexitcode: 0
[2023-04-13 05:43:04] 2023-04-13 03:42:49,809 | INFO     | pilot.control.job                | make_job_report           | exeerrorcode: 0
[2023-04-13 05:43:04] 2023-04-13 03:42:49,809 | INFO     | pilot.control.job                | make_job_report           | exeerrordiag: 
[2023-04-13 05:43:04] 2023-04-13 03:42:49,809 | INFO     | pilot.control.job                | make_job_report           | exitcode: 0
[2023-04-13 05:43:04] 2023-04-13 03:42:49,809 | INFO     | pilot.control.job                | make_job_report           | exitmsg: OK
[2023-04-13 05:43:04] 2023-04-13 03:42:49,809 | INFO     | pilot.control.job                | make_job_report           | cpuconsumptiontime: 478 s
[2023-04-13 05:43:04] 2023-04-13 03:42:49,809 | INFO     | pilot.control.job                | make_job_report           | nevents: 2
[2023-04-13 05:43:04] 2023-04-13 03:42:49,809 | INFO     | pilot.control.job                | make_job_report           | neventsw: 0
[2023-04-13 05:43:04] 2023-04-13 03:42:49,809 | INFO     | pilot.control.job                | make_job_report           | pid: 1693423
[2023-04-13 05:43:04] 2023-04-13 03:42:49,809 | INFO     | pilot.control.job                | make_job_report           | pgrp: 1693423
[2023-04-13 05:43:04] 2023-04-13 03:42:49,809 | INFO     | pilot.control.job                | make_job_report           | corecount: 2
[2023-04-13 05:43:04] 2023-04-13 03:42:49,809 | INFO     | pilot.control.job                | make_job_report           | event service: False
[2023-04-13 05:43:04] 2023-04-13 03:42:49,809 | INFO     | pilot.control.job                | make_job_report           | sizes: {0: 2563533, 1: 2564412, 11: 2564558, 22: 2564586, 32: 2564614, 43: 2564642, 52: 2564858, 54:
[2023-04-13 05:43:04] 2023-04-13 03:42:49,809 | INFO     | pilot.control.job                | make_job_report           | --------------------------------------------------
[2023-04-13 05:43:04] 2023-04-13 03:42:49,809 | INFO     | pilot.control.job                | make_job_report           | 
[2023-04-13 05:43:04] 2023-04-13 03:42:49,809 | DEBUG    | pilot.control.job                | has_job_completed         | ls -lF /var/lib/boinc_data/boinc-01/slots/3:
[2023-04-13 05:43:04] 
[2023-04-13 05:43:04] 2023-04-13 03:42:49,810 | INFO     | pilot.util.container             | print_executable          | executing command: ls -lF /var/lib/boinc_data/boinc-01/slots/3
[2023-04-13 05:43:04] 2023-04-13 03:42:49,872 | DEBUG    | pilot.control.job                | has_job_completed         | total 43428
[2023-04-13 05:43:04] -rw-r--r-- 2 yeti yeti 38019645 Apr 13 05:21 EVNT.04972714._000023.pool.root.1
[2023-04-13 05:43:04] drwxrwx--- 3 yeti yeti     4096 Apr 13 05:42 PanDA_Pilot-5817333075/
[2023-04-13 05:43:04] -rw------- 1 yeti yeti  1013942 Apr 13 05:21 agis_schedconf.cvmfs.json
[2023-04-13 05:43:04] -rw-rw-r-- 1 yeti yeti        0 Apr 13 05:21 boinc_lockfile
[2023-04-13 05:43:04] -rw-rw-r-- 1 yeti yeti     8192 Apr 13 05:42 boinc_mmap_file
[2023-04-13 05:43:04] -rw-rw-r-- 1 yeti yeti      532 Apr 13 05:31 boinc_task_state.xml
[2023-04-13 05:43:04] -rw------- 1 yeti yeti  1440294 Apr 13 05:22 cric_ddmendpoints.json
[2023-04-13 05:43:04] -rw------- 1 yeti yeti   367376 Apr 13 05:42 e3e70cb4-fbb5-44b0-b1a5-7628a90e8ce9_94689.1.job.log
[2023-04-13 05:43:04] -rw------- 1 yeti yeti   444760 Apr 13 05:39 e3e70cb4-fbb5-44b0-b1a5-7628a90e8ce9_94689.1.job.log.tgz
[2023-04-13 05:43:04] -rw------- 1 yeti yeti     7734 Apr 13 05:42 heartbeat.json
[2023-04-13 05:43:04] -rw-rw-r-- 1 yeti yeti     6443 Apr 13 05:21 init_data.xml
[2023-04-13 05:43:04] -rw-r--r-- 2 yeti yeti   414773 Apr 13 05:21 input.tar.gz
[2023-04-13 05:43:04] -rw-rw-r-- 1 yeti yeti      112 Apr 13 05:21 job.xml
[2023-04-13 05:43:04] -rw------- 1 yeti yeti     1001 Apr 13 05:35 memory_monitor_summary.json
[2023-04-13 05:43:04] -rw------- 1 yeti yeti  1827282 Apr 13 05:35 output.1.e3e70cb4-fbb5-44b0-b1a5-7628a90e8ce9_94689.pool.root
[2023-04-13 05:43:04] -rw------- 1 yeti yeti      464 Apr 13 05:42 output.list
[2023-04-13 05:43:04] -rw-rw-r-- 1 yeti yeti     2657 Apr 13 05:21 pandaJob.out
[2023-04-13 05:43:04] drwx------ 4 yeti yeti     4096 Apr 13 05:23 pilot3/
[2023-04-13 05:43:04] -rw-r--r-- 1 yeti yeti   403260 Apr 13 05:20 pilot3.tar.gz
[2023-04-13 05:43:04] -rw------- 1 yeti yeti   353866 Apr 13 05:42 pilotlog.txt
[2023-04-13 05:43:04] -rw-r--r-- 1 yeti yeti     4388 Apr 13 05:18 queuedata.json
[2023-04-13 05:43:04] -rw------- 1 yeti yeti      143 Apr 13 05:21 rbAMDmLg262n7Olcko1bjSoqABFKDmABFKDm7AsVDmsZHKDmKzvHIn.diag
[2023-04-13 05:43:04] -rwxr-xr-x 1 yeti yeti     7986 Apr 13 05:21 run_atlas*
[2023-04-13 05:43:04] -rwx------ 1 yeti yeti    27540 Apr 13 05:20 runpilot2-wrapper.sh*
[2023-04-13 05:43:04] -rw-rw-r-- 1 yeti yeti      407 Apr 13 05:21 runtime_log
[2023-04-13 05:43:04] -rw-rw-r-- 1 yeti yeti     7967 Apr 13 05:21 runtime_log.err
[2023-04-13 05:43:04] -rw------- 1 yeti yeti      424 Apr 13 05:21 setup.sh.local
[2023-04-13 05:43:04] drwxrwx--x 2 yeti yeti     4096 Apr 13 05:21 shared/
[2023-04-13 05:43:04] -rw-r--r-- 2 yeti yeti    17632 Apr 13 05:21 start_atlas.sh
[2023-04-13 05:43:04] -rw-rw-r-- 1 yeti yeti     1767 Apr 13 05:21 stderr.txt
[2023-04-13 05:43:04] -rw-rw-r-- 1 yeti yeti      107 Apr 13 05:21 wrapper_26015_x86_64-pc-linux-gnu
[2023-04-13 05:43:04] -rw-rw-r-- 1 yeti yeti       25 Apr 13 05:42 wrapper_checkpoint.txt
[2023-04-13 05:43:04] 2023-04-13 03:42:49,872 | INFO     | pilot.util.queuehandling         | queue_report              | queue jobs had 0 job(s) [purged]
[2023-04-13 05:43:04] 2023-04-13 03:42:49,872 | INFO     | pilot.util.queuehandling         | queue_report              | queue payloads had 0 job(s) [purged]
[2023-04-13 05:43:04] 2023-04-13 03:42:49,872 | INFO     | pilot.util.queuehandling         | queue_report              | queue data_in had 0 job(s) [purged]
[2023-04-13 05:43:04] 2023-04-13 03:42:49,872 | INFO     | pilot.util.queuehandling         | queue_report              | queue data_out had 0 job(s) [purged]
[2023-04-13 05:43:04] 2023-04-13 03:42:49,873 | INFO     | pilot.util.queuehandling         | queue_report              | queue current_data_in had 0 job(s) [purged]
[2023-04-13 05:43:04] 2023-04-13 03:42:49,873 | INFO     | pilot.util.queuehandling         | queue_report              | queue validated_jobs had 0 job(s) [purged]
[2023-04-13 05:43:04] 2023-04-13 03:42:49,873 | INFO     | pilot.util.queuehandling         | queue_report              | queue validated_payloads had 0 job(s) [purged]
[2023-04-13 05:43:04] 2023-04-13 03:42:49,873 | INFO     | pilot.util.queuehandling         | queue_report              | queue monitored_payloads had 0 job(s) [purged]
[2023-04-13 05:43:04] 2023-04-13 03:42:49,873 | INFO     | pilot.util.queuehandling         | queue_report              | queue finished_jobs had 0 job(s) [purged]
[2023-04-13 05:43:04] 2023-04-13 03:42:49,873 | INFO     | pilot.util.queuehandling         | queue_report              | queue finished_payloads had 0 job(s) [purged]
[2023-04-13 05:43:04] 2023-04-13 03:42:49,873 | INFO     | pilot.util.queuehandling         | queue_report              | queue finished_data_in had 1 job(s) [purged]
[2023-04-13 05:43:04] 2023-04-13 03:42:49,873 | INFO     | pilot.util.queuehandling         | queue_report              | queue finished_data_out had 0 job(s) [purged]
[2023-04-13 05:43:04] 2023-04-13 03:42:49,873 | INFO     | pilot.util.queuehandling         | queue_report              | queue failed_jobs had 0 job(s) [purged]
[2023-04-13 05:43:04] 2023-04-13 03:42:49,873 | INFO     | pilot.util.queuehandling         | queue_report              | queue failed_payloads had 0 job(s) [purged]
[2023-04-13 05:43:04] 2023-04-13 03:42:49,873 | INFO     | pilot.util.queuehandling         | queue_report              | queue failed_data_in had 0 job(s) [purged]
[2023-04-13 05:43:04] 2023-04-13 03:42:49,873 | INFO     | pilot.util.queuehandling         | queue_report              | queue failed_data_out had 0 job(s) [purged]
[2023-04-13 05:43:04] 2023-04-13 03:42:49,873 | INFO     | pilot.util.queuehandling         | queue_report              | queue completed_jobs had 0 job(s) [purged]
[2023-04-13 05:43:04] 2023-04-13 03:42:49,873 | INFO     | pilot.util.queuehandling         | queue_report              | queue completed_jobids has 1 job(s)
[2023-04-13 05:43:04] 2023-04-13 03:42:49,873 | INFO     | pilot.util.queuehandling         | queue_report              | queue realtimelog_payloads had 0 job(s) [purged]
[2023-04-13 05:43:04] 2023-04-13 03:42:49,873 | INFO     | pilot.util.queuehandling         | queue_report              | queue messages had 0 job(s) [purged]
[2023-04-13 05:43:04] 2023-04-13 03:42:49,874 | INFO     | pilot.control.job                | has_job_completed         | job 5817333075 has completed (purged errors)
[2023-04-13 05:43:04] 2023-04-13 03:42:49,874 | DEBUG    | pilot.util.realtimelogger        | cleanup                   | attempting real-time logger cleanup
[2023-04-13 05:43:04] 2023-04-13 03:42:49,874 | INFO     | pilot.util.processes             | cleanup                   | overall cleanup function is called
[2023-04-13 05:43:04] 2023-04-13 03:42:49,876 | DEBUG    | pilot.util.processes             | cleanup                   | work directory was removed: /var/lib/boinc_data/boinc-01/slots/3/PanDA_Pilot-5817333075
[2023-04-13 05:43:04] 2023-04-13 03:42:50,643 | WARNING  | pilot.control.monitor            | get_max_running_time      | queuedata could not be extracted from queues, will use default for max running time (324000s)
[2023-04-13 05:43:04] 2023-04-13 03:42:50,882 | INFO     | pilot.info.jobdata               | collect_zombies           | --- collectZombieJob: --- 10, [1693423]
[2023-04-13 05:43:04] 2023-04-13 03:42:50,882 | INFO     | pilot.info.jobdata               | collect_zombies           | zombie collector trying to kill pid 1693423
[2023-04-13 05:43:04] 2023-04-13 03:42:50,882 | INFO     | pilot.info.jobdata               | collect_zombies           | harmless exception when collecting zombies: [Errno 10] No child processes
[2023-04-13 05:43:04] 2023-04-13 03:42:51,887 | INFO     | pilot.util.processes             | cleanup                   | collected zombie processes
[2023-04-13 05:43:04] 2023-04-13 03:42:51,887 | INFO     | pilot.util.processes             | cleanup                   | will now attempt to kill all subprocesses of pid=1693423
[2023-04-13 05:43:04] 2023-04-13 03:42:51,972 | INFO     | pilot.util.processes             | kill_processes            | process IDs to be killed: [1693423] (in reverse order)
[2023-04-13 05:43:04] 2023-04-13 03:42:52,076 | WARNING  | pilot.util.processes             | kill_processes            | found no corresponding commands to process id(s)
[2023-04-13 05:43:04] 2023-04-13 03:42:52,076 | INFO     | pilot.util.processes             | kill_orphans              | Do not look for orphan processes in BOINC jobs
[2023-04-13 05:43:04] 2023-04-13 03:42:52,076 | DEBUG    | pilot.util.queuehandling         | purge_queue               | queue purged
[2023-04-13 05:43:04] 2023-04-13 03:42:52,076 | INFO     | pilot.control.job                | retrieve                  | ready for new job
[2023-04-13 05:43:04] 2023-04-13 03:42:52,076 | INFO     | root                             | retrieve                  | pilot has finished with previous job - re-establishing logging
[2023-04-13 05:43:04] 2023-04-13 03:42:52,077 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | ****************************************
[2023-04-13 05:43:04] 2023-04-13 03:42:52,077 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | ***  PanDA Pilot version 3.6.0 (51)  ***
[2023-04-13 05:43:04] 2023-04-13 03:42:52,077 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | ****************************************
[2023-04-13 05:43:04] 2023-04-13 03:42:52,077 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | 
[2023-04-13 05:43:04] 2023-04-13 03:42:52,077 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | pilot is running in a VM
[2023-04-13 05:43:04] 2023-04-13 03:42:52,077 | INFO     | pilot.util.auxiliary             | display_architecture_info | architecture information:
[2023-04-13 05:43:04] 2023-04-13 03:42:52,078 | INFO     | pilot.util.container             | print_executable          | executing command: cat /etc/os-release
[2023-04-13 05:43:04] 2023-04-13 03:42:52,137 | INFO     | pilot.util.filehandling          | dump                      | cat /etc/os-release:
[2023-04-13 05:43:04] NAME="CentOS Linux"
[2023-04-13 05:43:04] VERSION="7 (Core)"
[2023-04-13 05:43:04] ID="centos"
[2023-04-13 05:43:04] ID_LIKE="rhel fedora"
[2023-04-13 05:43:04] VERSION_ID="7"
[2023-04-13 05:43:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2023-04-13 05:43:04] ANSI_COLOR="0;31"
[2023-04-13 05:43:04] CPE_NAME="cpe:/o:centos:centos:7"
[2023-04-13 05:43:04] HOME_URL="https://www.centos.org/"
[2023-04-13 05:43:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2023-04-13 05:43:04] 
[2023-04-13 05:43:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2023-04-13 05:43:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2023-04-13 05:43:04] REDHAT_SUPPORT_PRODUCT="centos"
[2023-04-13 05:43:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2023-04-13 05:43:04] 
[2023-04-13 05:43:04] 2023-04-13 03:42:52,138 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | ****************************************
[2023-04-13 05:43:04] 2023-04-13 03:42:52,641 | DEBUG    | pilot.util.monitoring            | check_local_space         | checking local space on /var/lib/boinc_data/boinc-01/slots/3
[2023-04-13 05:43:04] 2023-04-13 03:42:52,642 | INFO     | pilot.util.container             | print_executable          | executing command: df -mP /var/lib/boinc_data/boinc-01/slots/3
[2023-04-13 05:43:04] 2023-04-13 03:42:52,644 | WARNING  | pilot.control.monitor            | get_max_running_time      | queuedata could not be extracted from queues, will use default for max running time (324000s)
[2023-04-13 05:43:04] 2023-04-13 03:42:52,698 | DEBUG    | pilot.util.workernode            | get_local_disk_space      | stdout=Filesystem     1048576-blocks  Used Available Capacity Mounted on
[2023-04-13 05:43:04] /dev/sda5               62572 31069     28294      53% /var/lib/boinc_data/boinc-01/slots/3
[2023-04-13 05:43:04] 2023-04-13 03:42:52,699 | DEBUG    | pilot.util.workernode            | get_local_disk_space      | stderr=
[2023-04-13 05:43:04] 2023-04-13 03:42:52,700 | INFO     | pilot.util.monitoring            | check_local_space         | sufficient remaining disk space (29668409344 B)
[2023-04-13 05:43:04] 2023-04-13 03:42:52,700 | WARNING  | pilot.control.job                | proceed_with_getjob       | since timefloor is set to 0, pilot was only allowed to run one job
[2023-04-13 05:43:04] 2023-04-13 03:42:52,701 | DEBUG    | pilot.control.job                | retrieve                  | will not set job_aborted yet
[2023-04-13 05:43:04] 2023-04-13 03:42:52,701 | WARNING  | pilot.util.common                | should_abort              | data:queue_monitoring:received graceful stop - abort after this iteration
[2023-04-13 05:43:04] 2023-04-13 03:42:52,701 | INFO     | pilot.control.job                | retrieve                  | [job] retrieve thread has finished
[2023-04-13 05:43:04] 2023-04-13 03:42:52,793 | DEBUG    | pilot.control.payload            | execute_payloads          | will not set job_aborted yet
[2023-04-13 05:43:04] 2023-04-13 03:42:52,793 | INFO     | pilot.control.payload            | execute_payloads          | [payload] execute_payloads thread has finished
[2023-04-13 05:43:04] 2023-04-13 03:42:52,807 | DEBUG    | pilot.control.payload            | validate_pre              | will not set job_aborted yet
[2023-04-13 05:43:04] 2023-04-13 03:42:52,807 | INFO     | pilot.control.payload            | validate_pre              | [payload] validate_pre thread has finished
[2023-04-13 05:43:04] 2023-04-13 03:42:52,812 | DEBUG    | pilot.control.job                | create_data_payload       | will not set job_aborted yet
[2023-04-13 05:43:04] 2023-04-13 03:42:52,813 | INFO     | pilot.control.job                | create_data_payload       | [job] create_data_payload thread has finished
[2023-04-13 05:43:04] 2023-04-13 03:42:52,825 | DEBUG    | pilot.control.payload            | control                   | payload control ending since graceful_stop has been set
[2023-04-13 05:43:04] 2023-04-13 03:42:52,826 | DEBUG    | pilot.control.payload            | control                   | will not set job_aborted yet
[2023-04-13 05:43:04] 2023-04-13 03:42:52,826 | INFO     | pilot.control.payload            | control                   | [payload] control thread has finished
[2023-04-13 05:43:04] 2023-04-13 03:42:52,832 | DEBUG    | pilot.control.payload            | failed_post               | will not set job_aborted yet
[2023-04-13 05:43:04] 2023-04-13 03:42:52,833 | INFO     | pilot.control.payload            | failed_post               | [payload] failed_post thread has finished
[2023-04-13 05:43:04] 2023-04-13 03:42:52,873 | DEBUG    | pilot.control.job                | validate                  | will not set job_aborted yet
[2023-04-13 05:43:04] 2023-04-13 03:42:52,873 | INFO     | pilot.control.job                | validate                  | [job] validate thread has finished
[2023-04-13 05:43:04] 2023-04-13 03:42:53,047 | WARNING  | pilot.util.common                | should_abort              | data:copytool_out:received graceful stop - abort after this iteration
[2023-04-13 05:43:04] 2023-04-13 03:42:53,439 | DEBUG    | pilot.control.payload            | validate_post             | will not set job_aborted yet
[2023-04-13 05:43:04] 2023-04-13 03:42:53,439 | INFO     | pilot.control.payload            | validate_post             | [payload] validate_post thread has finished
[2023-04-13 05:43:04] 2023-04-13 03:42:53,531 | DEBUG    | pilot.control.data               | copytool_in               | will not set job_aborted yet
[2023-04-13 05:43:04] 2023-04-13 03:42:53,531 | INFO     | pilot.control.data               | copytool_in               | [data] copytool_in thread has finished
[2023-04-13 05:43:04] 2023-04-13 03:42:53,614 | DEBUG    | pilot.control.data               | control                   | data control ending since graceful_stop has been set
[2023-04-13 05:43:04] 2023-04-13 03:42:53,614 | DEBUG    | pilot.control.data               | control                   | will not set job_aborted yet
[2023-04-13 05:43:04] 2023-04-13 03:42:53,614 | INFO     | pilot.control.data               | control                   | [data] control thread has finished
[2023-04-13 05:43:04] 2023-04-13 03:42:53,650 | INFO     | pilot.control.monitor            | control                   | [monitor] control thread has ended
[2023-04-13 05:43:04] 2023-04-13 03:42:53,922 | DEBUG    | pilot.control.job                | control                   | job control ending since graceful_stop has been set
[2023-04-13 05:43:04] 2023-04-13 03:42:53,922 | DEBUG    | pilot.control.job                | control                   | will not set job_aborted yet
[2023-04-13 05:43:04] 2023-04-13 03:42:53,922 | INFO     | pilot.control.job                | control                   | [job] control thread has finished
[2023-04-13 05:43:04] 2023-04-13 03:42:54,047 | DEBUG    | pilot.control.data               | copytool_out              | will not set job_aborted yet
[2023-04-13 05:43:04] 2023-04-13 03:42:54,047 | INFO     | pilot.control.data               | copytool_out              | [data] copytool_out thread has finished
[2023-04-13 05:43:04] 2023-04-13 03:42:54,820 | WARNING  | pilot.util.common                | should_abort              | job:queue_monitor:received graceful stop - abort after this iteration
[2023-04-13 05:43:04] 2023-04-13 03:42:54,821 | DEBUG    | pilot.control.job                | queue_monitor             | will not set job_aborted yet
[2023-04-13 05:43:04] 2023-04-13 03:42:54,821 | INFO     | pilot.control.job                | queue_monitor             | [job] queue monitor thread has finished
[2023-04-13 05:43:04] 2023-04-13 03:42:55,703 | DEBUG    | pilot.control.data               | queue_monitoring          | will not set job_aborted yet
[2023-04-13 05:43:04] 2023-04-13 03:42:55,703 | INFO     | pilot.control.data               | queue_monitoring          | [data] queue_monitor thread has finished
[2023-04-13 05:43:04] 2023-04-13 03:43:03,094 | INFO     | pilot.control.payload            | get_logging_info          | job.realtimelogging is not enabled
[2023-04-13 05:43:04] 2023-04-13 03:43:03,094 | DEBUG    | pilot.control.payload            | run_realtimelog           | real-time logging not needed at this point
[2023-04-13 05:43:04] 2023-04-13 03:43:03,094 | DEBUG    | pilot.control.payload            | run_realtimelog           | realtime logger was not found, waiting ..
[2023-04-13 05:43:04] 2023-04-13 03:43:03,094 | DEBUG    | pilot.control.payload            | run_realtimelog           | will not set job_aborted yet
[2023-04-13 05:43:04] 2023-04-13 03:43:03,094 | INFO     | pilot.control.payload            | run_realtimelog           | [payload] run_realtimelog thread has finished
[2023-04-13 05:43:04] 2023-04-13 03:43:03,439 | DEBUG    | pilot.util.processes             | threads_aborted           | aborting since only the main Pilot thread is still running (total thread count=1 with 0 daemon threa
[2023-04-13 05:43:04] 2023-04-13 03:43:03,439 | DEBUG    | pilot.workflow.generic           | run                       | all relevant threads have aborted (thread count=1)
[2023-04-13 05:43:04] 2023-04-13 03:43:03,439 | INFO     | pilot.workflow.generic           | run                       | end of generic workflow (traces error code: 0)
[2023-04-13 05:43:04] 2023-04-13 03:43:03,439 | INFO     | root                             | wrap_up                   | traces error code: 0
[2023-04-13 05:43:04] 2023-04-13 03:43:03,439 | INFO     | root                             | wrap_up                   | pilot has finished
[2023-04-13 05:43:04] 2023-04-13 03:43:03,510 [wrapper] ==== pilot stdout END ====
[2023-04-13 05:43:04] 2023-04-13 03:43:03,537 [wrapper] ==== wrapper stdout RESUME ====
[2023-04-13 05:43:04] 2023-04-13 03:43:03,561 [wrapper] pilotpid: 1689924
[2023-04-13 05:43:04] 2023-04-13 03:43:03,594 [wrapper] Pilot exit status: 0
[2023-04-13 05:43:04] 2023-04-13 03:43:03,670 [wrapper] pandaids: 5817333075
[2023-04-13 05:43:04] 2023-04-13 03:43:03,720 [wrapper] apfmon messages muted
[2023-04-13 05:43:04] 2023-04-13 03:43:03,739 [wrapper] Test setup, not cleaning
[2023-04-13 05:43:04] 2023-04-13 03:43:03,761 [wrapper] ==== wrapper stdout END ====
[2023-04-13 05:43:04] 2023-04-13 03:43:03,783 [wrapper] ==== wrapper stderr END ====
[2023-04-13 05:43:04] 2023-04-13 03:43:03,844 [wrapper] wrapperexiting ec=0, duration=1313
[2023-04-13 05:43:04] 2023-04-13 03:43:03,877 [wrapper] apfmon messages muted
[2023-04-13 05:43:04]  *** Error codes and diagnostics ***
[2023-04-13 05:43:04]     "exeErrorCode": 0,
[2023-04-13 05:43:04]     "exeErrorDiag": "",
[2023-04-13 05:43:04]     "pilotErrorCode": 0,
[2023-04-13 05:43:04]     "pilotErrorDiag": "",
[2023-04-13 05:43:04]  *** Listing of results directory ***
[2023-04-13 05:43:04] insgesamt 45744
[2023-04-13 05:43:04] -rw-r--r-- 1 yeti yeti     4388 Apr 13 05:18 queuedata.json
[2023-04-13 05:43:04] -rwx------ 1 yeti yeti    27540 Apr 13 05:20 runpilot2-wrapper.sh
[2023-04-13 05:43:04] -rw-r--r-- 1 yeti yeti   403260 Apr 13 05:20 pilot3.tar.gz
[2023-04-13 05:43:04] -rw-rw-r-- 1 yeti yeti      107 Apr 13 05:21 wrapper_26015_x86_64-pc-linux-gnu
[2023-04-13 05:43:04] -rwxr-xr-x 1 yeti yeti     7986 Apr 13 05:21 run_atlas
[2023-04-13 05:43:04] -rw-rw-r-- 1 yeti yeti      112 Apr 13 05:21 job.xml
[2023-04-13 05:43:04] -rw-r--r-- 2 yeti yeti    17632 Apr 13 05:21 start_atlas.sh
[2023-04-13 05:43:04] drwxrwx--x 2 yeti yeti     4096 Apr 13 05:21 shared
[2023-04-13 05:43:04] -rw-r--r-- 2 yeti yeti   414773 Apr 13 05:21 input.tar.gz
[2023-04-13 05:43:04] -rw-rw-r-- 1 yeti yeti     6443 Apr 13 05:21 init_data.xml
[2023-04-13 05:43:04] -rw-r--r-- 2 yeti yeti 38019645 Apr 13 05:21 EVNT.04972714._000023.pool.root.1
[2023-04-13 05:43:04] -rw-rw-r-- 1 yeti yeti        0 Apr 13 05:21 boinc_lockfile
[2023-04-13 05:43:04] -rw-rw-r-- 1 yeti yeti     2657 Apr 13 05:21 pandaJob.out
[2023-04-13 05:43:04] -rw------- 1 yeti yeti      424 Apr 13 05:21 setup.sh.local
[2023-04-13 05:43:04] -rw------- 1 yeti yeti  1013942 Apr 13 05:21 agis_schedconf.cvmfs.json
[2023-04-13 05:43:04] -rw------- 1 yeti yeti  1440294 Apr 13 05:22 cric_ddmendpoints.json
[2023-04-13 05:43:04] drwx------ 4 yeti yeti     4096 Apr 13 05:23 pilot3
[2023-04-13 05:43:04] -rw-rw-r-- 1 yeti yeti      532 Apr 13 05:31 boinc_task_state.xml
[2023-04-13 05:43:04] -rw------- 1 yeti yeti  1827282 Apr 13 05:35 output.1.e3e70cb4-fbb5-44b0-b1a5-7628a90e8ce9_94689.pool.root
[2023-04-13 05:43:04] -rw------- 1 yeti yeti     1001 Apr 13 05:35 memory_monitor_summary.json
[2023-04-13 05:43:04] -rw------- 1 yeti yeti   444760 Apr 13 05:39 e3e70cb4-fbb5-44b0-b1a5-7628a90e8ce9_94689.1.job.log.tgz
[2023-04-13 05:43:04] -rw------- 1 yeti yeti     7734 Apr 13 05:42 heartbeat.json
[2023-04-13 05:43:04] -rw-rw-r-- 1 yeti yeti     8192 Apr 13 05:43 boinc_mmap_file
[2023-04-13 05:43:04] -rw-rw-r-- 1 yeti yeti       25 Apr 13 05:43 wrapper_checkpoint.txt
[2023-04-13 05:43:04] -rw------- 1 yeti yeti     9088 Apr 13 05:43 pilotlog.txt
[2023-04-13 05:43:04] -rw------- 1 yeti yeti   384606 Apr 13 05:43 e3e70cb4-fbb5-44b0-b1a5-7628a90e8ce9_94689.1.job.log
[2023-04-13 05:43:04] -rw------- 1 yeti yeti      464 Apr 13 05:43 output.list
[2023-04-13 05:43:04] -rw-rw-r-- 1 yeti yeti      748 Apr 13 05:43 runtime_log
[2023-04-13 05:43:04] -rw------- 1 yeti yeti  2672640 Apr 13 05:43 result.tar.gz
[2023-04-13 05:43:04] -rw-rw-r-- 1 yeti yeti    12223 Apr 13 05:43 runtime_log.err
[2023-04-13 05:43:04] -rw------- 1 yeti yeti      623 Apr 13 05:43 rbAMDmLg262n7Olcko1bjSoqABFKDmABFKDm7AsVDmsZHKDmKzvHIn.diag
[2023-04-13 05:43:04] -rw-rw-r-- 1 yeti yeti    29271 Apr 13 05:43 stderr.txt
[2023-04-13 05:43:04] HITS file was successfully produced:
[2023-04-13 05:43:04] -rw------- 1 yeti yeti 1827282 Apr 13 05:35 shared/HITS.pool.root.1
[2023-04-13 05:43:04]  *** Contents of shared directory: ***
[2023-04-13 05:43:04] insgesamt 41960
[2023-04-13 05:43:04] -rw-r--r-- 2 yeti yeti    17632 Apr 13 05:21 start_atlas.sh
[2023-04-13 05:43:04] -rw-r--r-- 2 yeti yeti   414773 Apr 13 05:21 input.tar.gz
[2023-04-13 05:43:04] -rw-r--r-- 2 yeti yeti 38019645 Apr 13 05:21 ATLAS.root_0
[2023-04-13 05:43:04] -rw------- 1 yeti yeti  1827282 Apr 13 05:35 HITS.pool.root.1
[2023-04-13 05:43:04] -rw------- 1 yeti yeti  2672640 Apr 13 05:43 result.tar.gz
05:43:05 (1686329): run_atlas exited; CPU time 392.544749
05:43:05 (1686329): called boinc_finish(0)

</stderr_txt>
]]>


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