Name | rbAMDmLg262n7Olcko1bjSoqABFKDmABFKDm7AsVDmsZHKDmKzvHIn_0 |
Workunit | 2299160 |
Created | 13 Apr 2023, 3:20:11 UTC |
Sent | 13 Apr 2023, 3:21:00 UTC |
Report deadline | 20 Apr 2023, 3:21:00 UTC |
Received | 13 Apr 2023, 3:43:31 UTC |
Server state | Over |
Outcome | Success |
Client state | Done |
Exit status | 0 (0x00000000) |
Computer ID | 4842 |
Run time | 21 min 57 sec |
CPU time | 6 min 32 sec |
Validate state | Valid |
Credit | 30.32 |
Device peak FLOPS | 2.00 GFLOPS |
Application version | ATLAS Simulation v3.01 (native_mt) x86_64-pc-linux-gnu |
Peak working set size | 1.41 GB |
Peak swap size | 2.12 GB |
Peak disk usage | 82.91 MB |
<core_client_version>7.20.2</core_client_version> <![CDATA[ <stderr_txt> 05:21:09 (1686329): wrapper (7.7.26015): starting 05:21:09 (1686329): wrapper: running run_atlas (--nthreads 2) [2023-04-13 05:21:09] Arguments: --nthreads 2 [2023-04-13 05:21:09] Threads: 2 [2023-04-13 05:21:09] Checking for CVMFS [2023-04-13 05:21:09] Probing /cvmfs/atlas.cern.ch... OK [2023-04-13 05:21:09] Probing /cvmfs/atlas-condb.cern.ch... OK [2023-04-13 05:21:09] Running cvmfs_config stat atlas.cern.ch [2023-04-13 05:21:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE [2023-04-13 05:21:09] 2.9.4.0 309325 19528 109548 117865 2 9 5920279 10240000 2700 130560 2 82683761 99.964 6580427 2829 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.101:3128 1 [2023-04-13 05:21:09] CVMFS is ok [2023-04-13 05:21:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 [2023-04-13 05:21:09] Checking for apptainer binary... [2023-04-13 05:21:09] Using apptainer found in PATH at /usr/bin/apptainer [2023-04-13 05:21:09] Running /usr/bin/apptainer --version [2023-04-13 05:21:09] apptainer version 1.1.0-rc.2 [2023-04-13 05:21:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname [2023-04-13 05:21:09] ellievl [2023-04-13 05:21:09] apptainer works [2023-04-13 05:21:09] Set ATHENA_PROC_NUMBER=2 [2023-04-13 05:21:09] Set ATHENA_CORE_NUMBER=2 [2023-04-13 05:21:09] Starting ATLAS job with PandaID=5817333075 [2023-04-13 05:21:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc_data/boinc-01/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh [2023-04-13 05:43:04] *** The last 200 lines of the pilot log: *** [2023-04-13 05:43:04] 2023-04-13 03:42:49,748 | INFO | pilot.user.atlas.utilities | get_memory_values | using path: /var/lib/boinc_data/boinc-01/slots/3/PanDA_Pilot-5817333075/memory_monitor_summary.json [2023-04-13 05:43:04] 2023-04-13 03:42:49,749 | DEBUG | pilot.user.atlas.utilities | get_memory_monitor_info | summary_dictionary={'Avg': {'nprocs': 4.909, 'nthreads': 5.545, 'pss': 901120.0, 'rchar': 147644220. [2023-04-13 05:43:04] 2023-04-13 03:42:49,749 | INFO | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard info from prmon json [2023-04-13 05:43:04] 2023-04-13 03:42:49,749 | INFO | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard memory fields from prmon json [2023-04-13 05:43:04] 2023-04-13 03:42:49,749 | INFO | pilot.util.timing | timing_report | .............................. [2023-04-13 05:43:04] 2023-04-13 03:42:49,749 | INFO | pilot.util.timing | timing_report | . Timing measurements: [2023-04-13 05:43:04] 2023-04-13 03:42:49,749 | INFO | pilot.util.timing | timing_report | . get job = 85 s [2023-04-13 05:43:04] 2023-04-13 03:42:49,750 | INFO | pilot.util.timing | timing_report | . initial setup = 48 s [2023-04-13 05:43:04] 2023-04-13 03:42:49,750 | INFO | pilot.util.timing | timing_report | . payload setup = 23 s [2023-04-13 05:43:04] 2023-04-13 03:42:49,750 | INFO | pilot.util.timing | timing_report | . stage-in = 51 s [2023-04-13 05:43:04] 2023-04-13 03:42:49,750 | INFO | pilot.util.timing | timing_report | . payload execution = 631 s [2023-04-13 05:43:04] 2023-04-13 03:42:49,750 | INFO | pilot.util.timing | timing_report | . stage-out = 424 s [2023-04-13 05:43:04] 2023-04-13 03:42:49,750 | INFO | pilot.util.timing | timing_report | .............................. [2023-04-13 05:43:04] 2023-04-13 03:42:49,750 | DEBUG | pilot.control.job | send_state | data={'jobId': '5817333075', 'state': 'finished', 'timestamp': '2023-04-13T05:42:49+01:00', 'siteNam [2023-04-13 05:43:04] 2023-04-13 03:42:49,751 | DEBUG | pilot.control.job | write_heartbeat_to_file | heartbeat dictionary: {'jobId': '5817333075', 'state': 'finished', 'timestamp': '2023-04-13T05:42:49 [2023-04-13 05:43:04] 2023-04-13 03:42:49,751 | DEBUG | pilot.control.job | write_heartbeat_to_file | wrote heartbeat to file: /var/lib/boinc_data/boinc-01/slots/3/heartbeat.json [2023-04-13 05:43:04] 2023-04-13 03:42:49,809 | INFO | pilot.control.job | make_job_report | [2023-04-13 05:43:04] 2023-04-13 03:42:49,809 | INFO | pilot.control.job | make_job_report | job summary report [2023-04-13 05:43:04] 2023-04-13 03:42:49,809 | INFO | pilot.control.job | make_job_report | -------------------------------------------------- [2023-04-13 05:43:04] 2023-04-13 03:42:49,809 | INFO | pilot.control.job | make_job_report | PanDA job id: 5817333075 [2023-04-13 05:43:04] 2023-04-13 03:42:49,809 | INFO | pilot.control.job | make_job_report | task id: NULL [2023-04-13 05:43:04] 2023-04-13 03:42:49,809 | INFO | pilot.control.job | make_job_report | errors: (none) [2023-04-13 05:43:04] 2023-04-13 03:42:49,809 | INFO | pilot.control.job | make_job_report | status: LOG_TRANSFER = DONE [2023-04-13 05:43:04] 2023-04-13 03:42:49,809 | INFO | pilot.control.job | make_job_report | pilot state: finished [2023-04-13 05:43:04] 2023-04-13 03:42:49,809 | INFO | pilot.control.job | make_job_report | transexitcode: 0 [2023-04-13 05:43:04] 2023-04-13 03:42:49,809 | INFO | pilot.control.job | make_job_report | exeerrorcode: 0 [2023-04-13 05:43:04] 2023-04-13 03:42:49,809 | INFO | pilot.control.job | make_job_report | exeerrordiag: [2023-04-13 05:43:04] 2023-04-13 03:42:49,809 | INFO | pilot.control.job | make_job_report | exitcode: 0 [2023-04-13 05:43:04] 2023-04-13 03:42:49,809 | INFO | pilot.control.job | make_job_report | exitmsg: OK [2023-04-13 05:43:04] 2023-04-13 03:42:49,809 | INFO | pilot.control.job | make_job_report | cpuconsumptiontime: 478 s [2023-04-13 05:43:04] 2023-04-13 03:42:49,809 | INFO | pilot.control.job | make_job_report | nevents: 2 [2023-04-13 05:43:04] 2023-04-13 03:42:49,809 | INFO | pilot.control.job | make_job_report | neventsw: 0 [2023-04-13 05:43:04] 2023-04-13 03:42:49,809 | INFO | pilot.control.job | make_job_report | pid: 1693423 [2023-04-13 05:43:04] 2023-04-13 03:42:49,809 | INFO | pilot.control.job | make_job_report | pgrp: 1693423 [2023-04-13 05:43:04] 2023-04-13 03:42:49,809 | INFO | pilot.control.job | make_job_report | corecount: 2 [2023-04-13 05:43:04] 2023-04-13 03:42:49,809 | INFO | pilot.control.job | make_job_report | event service: False [2023-04-13 05:43:04] 2023-04-13 03:42:49,809 | INFO | pilot.control.job | make_job_report | sizes: {0: 2563533, 1: 2564412, 11: 2564558, 22: 2564586, 32: 2564614, 43: 2564642, 52: 2564858, 54: [2023-04-13 05:43:04] 2023-04-13 03:42:49,809 | INFO | pilot.control.job | make_job_report | -------------------------------------------------- [2023-04-13 05:43:04] 2023-04-13 03:42:49,809 | INFO | pilot.control.job | make_job_report | [2023-04-13 05:43:04] 2023-04-13 03:42:49,809 | DEBUG | pilot.control.job | has_job_completed | ls -lF /var/lib/boinc_data/boinc-01/slots/3: [2023-04-13 05:43:04] [2023-04-13 05:43:04] 2023-04-13 03:42:49,810 | INFO | pilot.util.container | print_executable | executing command: ls -lF /var/lib/boinc_data/boinc-01/slots/3 [2023-04-13 05:43:04] 2023-04-13 03:42:49,872 | DEBUG | pilot.control.job | has_job_completed | total 43428 [2023-04-13 05:43:04] -rw-r--r-- 2 yeti yeti 38019645 Apr 13 05:21 EVNT.04972714._000023.pool.root.1 [2023-04-13 05:43:04] drwxrwx--- 3 yeti yeti 4096 Apr 13 05:42 PanDA_Pilot-5817333075/ [2023-04-13 05:43:04] -rw------- 1 yeti yeti 1013942 Apr 13 05:21 agis_schedconf.cvmfs.json [2023-04-13 05:43:04] -rw-rw-r-- 1 yeti yeti 0 Apr 13 05:21 boinc_lockfile [2023-04-13 05:43:04] -rw-rw-r-- 1 yeti yeti 8192 Apr 13 05:42 boinc_mmap_file [2023-04-13 05:43:04] -rw-rw-r-- 1 yeti yeti 532 Apr 13 05:31 boinc_task_state.xml [2023-04-13 05:43:04] -rw------- 1 yeti yeti 1440294 Apr 13 05:22 cric_ddmendpoints.json [2023-04-13 05:43:04] -rw------- 1 yeti yeti 367376 Apr 13 05:42 e3e70cb4-fbb5-44b0-b1a5-7628a90e8ce9_94689.1.job.log [2023-04-13 05:43:04] -rw------- 1 yeti yeti 444760 Apr 13 05:39 e3e70cb4-fbb5-44b0-b1a5-7628a90e8ce9_94689.1.job.log.tgz [2023-04-13 05:43:04] -rw------- 1 yeti yeti 7734 Apr 13 05:42 heartbeat.json [2023-04-13 05:43:04] -rw-rw-r-- 1 yeti yeti 6443 Apr 13 05:21 init_data.xml [2023-04-13 05:43:04] -rw-r--r-- 2 yeti yeti 414773 Apr 13 05:21 input.tar.gz [2023-04-13 05:43:04] -rw-rw-r-- 1 yeti yeti 112 Apr 13 05:21 job.xml [2023-04-13 05:43:04] -rw------- 1 yeti yeti 1001 Apr 13 05:35 memory_monitor_summary.json [2023-04-13 05:43:04] -rw------- 1 yeti yeti 1827282 Apr 13 05:35 output.1.e3e70cb4-fbb5-44b0-b1a5-7628a90e8ce9_94689.pool.root [2023-04-13 05:43:04] -rw------- 1 yeti yeti 464 Apr 13 05:42 output.list [2023-04-13 05:43:04] -rw-rw-r-- 1 yeti yeti 2657 Apr 13 05:21 pandaJob.out [2023-04-13 05:43:04] drwx------ 4 yeti yeti 4096 Apr 13 05:23 pilot3/ [2023-04-13 05:43:04] -rw-r--r-- 1 yeti yeti 403260 Apr 13 05:20 pilot3.tar.gz [2023-04-13 05:43:04] -rw------- 1 yeti yeti 353866 Apr 13 05:42 pilotlog.txt [2023-04-13 05:43:04] -rw-r--r-- 1 yeti yeti 4388 Apr 13 05:18 queuedata.json [2023-04-13 05:43:04] -rw------- 1 yeti yeti 143 Apr 13 05:21 rbAMDmLg262n7Olcko1bjSoqABFKDmABFKDm7AsVDmsZHKDmKzvHIn.diag [2023-04-13 05:43:04] -rwxr-xr-x 1 yeti yeti 7986 Apr 13 05:21 run_atlas* [2023-04-13 05:43:04] -rwx------ 1 yeti yeti 27540 Apr 13 05:20 runpilot2-wrapper.sh* [2023-04-13 05:43:04] -rw-rw-r-- 1 yeti yeti 407 Apr 13 05:21 runtime_log [2023-04-13 05:43:04] -rw-rw-r-- 1 yeti yeti 7967 Apr 13 05:21 runtime_log.err [2023-04-13 05:43:04] -rw------- 1 yeti yeti 424 Apr 13 05:21 setup.sh.local [2023-04-13 05:43:04] drwxrwx--x 2 yeti yeti 4096 Apr 13 05:21 shared/ [2023-04-13 05:43:04] -rw-r--r-- 2 yeti yeti 17632 Apr 13 05:21 start_atlas.sh [2023-04-13 05:43:04] -rw-rw-r-- 1 yeti yeti 1767 Apr 13 05:21 stderr.txt [2023-04-13 05:43:04] -rw-rw-r-- 1 yeti yeti 107 Apr 13 05:21 wrapper_26015_x86_64-pc-linux-gnu [2023-04-13 05:43:04] -rw-rw-r-- 1 yeti yeti 25 Apr 13 05:42 wrapper_checkpoint.txt [2023-04-13 05:43:04] 2023-04-13 03:42:49,872 | INFO | pilot.util.queuehandling | queue_report | queue jobs had 0 job(s) [purged] [2023-04-13 05:43:04] 2023-04-13 03:42:49,872 | INFO | pilot.util.queuehandling | queue_report | queue payloads had 0 job(s) [purged] [2023-04-13 05:43:04] 2023-04-13 03:42:49,872 | INFO | pilot.util.queuehandling | queue_report | queue data_in had 0 job(s) [purged] [2023-04-13 05:43:04] 2023-04-13 03:42:49,872 | INFO | pilot.util.queuehandling | queue_report | queue data_out had 0 job(s) [purged] [2023-04-13 05:43:04] 2023-04-13 03:42:49,873 | INFO | pilot.util.queuehandling | queue_report | queue current_data_in had 0 job(s) [purged] [2023-04-13 05:43:04] 2023-04-13 03:42:49,873 | INFO | pilot.util.queuehandling | queue_report | queue validated_jobs had 0 job(s) [purged] [2023-04-13 05:43:04] 2023-04-13 03:42:49,873 | INFO | pilot.util.queuehandling | queue_report | queue validated_payloads had 0 job(s) [purged] [2023-04-13 05:43:04] 2023-04-13 03:42:49,873 | INFO | pilot.util.queuehandling | queue_report | queue monitored_payloads had 0 job(s) [purged] [2023-04-13 05:43:04] 2023-04-13 03:42:49,873 | INFO | pilot.util.queuehandling | queue_report | queue finished_jobs had 0 job(s) [purged] [2023-04-13 05:43:04] 2023-04-13 03:42:49,873 | INFO | pilot.util.queuehandling | queue_report | queue finished_payloads had 0 job(s) [purged] [2023-04-13 05:43:04] 2023-04-13 03:42:49,873 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_in had 1 job(s) [purged] [2023-04-13 05:43:04] 2023-04-13 03:42:49,873 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_out had 0 job(s) [purged] [2023-04-13 05:43:04] 2023-04-13 03:42:49,873 | INFO | pilot.util.queuehandling | queue_report | queue failed_jobs had 0 job(s) [purged] [2023-04-13 05:43:04] 2023-04-13 03:42:49,873 | INFO | pilot.util.queuehandling | queue_report | queue failed_payloads had 0 job(s) [purged] [2023-04-13 05:43:04] 2023-04-13 03:42:49,873 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_in had 0 job(s) [purged] [2023-04-13 05:43:04] 2023-04-13 03:42:49,873 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_out had 0 job(s) [purged] [2023-04-13 05:43:04] 2023-04-13 03:42:49,873 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobs had 0 job(s) [purged] [2023-04-13 05:43:04] 2023-04-13 03:42:49,873 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobids has 1 job(s) [2023-04-13 05:43:04] 2023-04-13 03:42:49,873 | INFO | pilot.util.queuehandling | queue_report | queue realtimelog_payloads had 0 job(s) [purged] [2023-04-13 05:43:04] 2023-04-13 03:42:49,873 | INFO | pilot.util.queuehandling | queue_report | queue messages had 0 job(s) [purged] [2023-04-13 05:43:04] 2023-04-13 03:42:49,874 | INFO | pilot.control.job | has_job_completed | job 5817333075 has completed (purged errors) [2023-04-13 05:43:04] 2023-04-13 03:42:49,874 | DEBUG | pilot.util.realtimelogger | cleanup | attempting real-time logger cleanup [2023-04-13 05:43:04] 2023-04-13 03:42:49,874 | INFO | pilot.util.processes | cleanup | overall cleanup function is called [2023-04-13 05:43:04] 2023-04-13 03:42:49,876 | DEBUG | pilot.util.processes | cleanup | work directory was removed: /var/lib/boinc_data/boinc-01/slots/3/PanDA_Pilot-5817333075 [2023-04-13 05:43:04] 2023-04-13 03:42:50,643 | WARNING | pilot.control.monitor | get_max_running_time | queuedata could not be extracted from queues, will use default for max running time (324000s) [2023-04-13 05:43:04] 2023-04-13 03:42:50,882 | INFO | pilot.info.jobdata | collect_zombies | --- collectZombieJob: --- 10, [1693423] [2023-04-13 05:43:04] 2023-04-13 03:42:50,882 | INFO | pilot.info.jobdata | collect_zombies | zombie collector trying to kill pid 1693423 [2023-04-13 05:43:04] 2023-04-13 03:42:50,882 | INFO | pilot.info.jobdata | collect_zombies | harmless exception when collecting zombies: [Errno 10] No child processes [2023-04-13 05:43:04] 2023-04-13 03:42:51,887 | INFO | pilot.util.processes | cleanup | collected zombie processes [2023-04-13 05:43:04] 2023-04-13 03:42:51,887 | INFO | pilot.util.processes | cleanup | will now attempt to kill all subprocesses of pid=1693423 [2023-04-13 05:43:04] 2023-04-13 03:42:51,972 | INFO | pilot.util.processes | kill_processes | process IDs to be killed: [1693423] (in reverse order) [2023-04-13 05:43:04] 2023-04-13 03:42:52,076 | WARNING | pilot.util.processes | kill_processes | found no corresponding commands to process id(s) [2023-04-13 05:43:04] 2023-04-13 03:42:52,076 | INFO | pilot.util.processes | kill_orphans | Do not look for orphan processes in BOINC jobs [2023-04-13 05:43:04] 2023-04-13 03:42:52,076 | DEBUG | pilot.util.queuehandling | purge_queue | queue purged [2023-04-13 05:43:04] 2023-04-13 03:42:52,076 | INFO | pilot.control.job | retrieve | ready for new job [2023-04-13 05:43:04] 2023-04-13 03:42:52,076 | INFO | root | retrieve | pilot has finished with previous job - re-establishing logging [2023-04-13 05:43:04] 2023-04-13 03:42:52,077 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************** [2023-04-13 05:43:04] 2023-04-13 03:42:52,077 | INFO | pilot.util.auxiliary | pilot_version_banner | *** PanDA Pilot version 3.6.0 (51) *** [2023-04-13 05:43:04] 2023-04-13 03:42:52,077 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************** [2023-04-13 05:43:04] 2023-04-13 03:42:52,077 | INFO | pilot.util.auxiliary | pilot_version_banner | [2023-04-13 05:43:04] 2023-04-13 03:42:52,077 | INFO | pilot.util.auxiliary | pilot_version_banner | pilot is running in a VM [2023-04-13 05:43:04] 2023-04-13 03:42:52,077 | INFO | pilot.util.auxiliary | display_architecture_info | architecture information: [2023-04-13 05:43:04] 2023-04-13 03:42:52,078 | INFO | pilot.util.container | print_executable | executing command: cat /etc/os-release [2023-04-13 05:43:04] 2023-04-13 03:42:52,137 | INFO | pilot.util.filehandling | dump | cat /etc/os-release: [2023-04-13 05:43:04] NAME="CentOS Linux" [2023-04-13 05:43:04] VERSION="7 (Core)" [2023-04-13 05:43:04] ID="centos" [2023-04-13 05:43:04] ID_LIKE="rhel fedora" [2023-04-13 05:43:04] VERSION_ID="7" [2023-04-13 05:43:04] PRETTY_NAME="CentOS Linux 7 (Core)" [2023-04-13 05:43:04] ANSI_COLOR="0;31" [2023-04-13 05:43:04] CPE_NAME="cpe:/o:centos:centos:7" [2023-04-13 05:43:04] HOME_URL="https://www.centos.org/" [2023-04-13 05:43:04] BUG_REPORT_URL="https://bugs.centos.org/" [2023-04-13 05:43:04] [2023-04-13 05:43:04] CENTOS_MANTISBT_PROJECT="CentOS-7" [2023-04-13 05:43:04] CENTOS_MANTISBT_PROJECT_VERSION="7" [2023-04-13 05:43:04] REDHAT_SUPPORT_PRODUCT="centos" [2023-04-13 05:43:04] REDHAT_SUPPORT_PRODUCT_VERSION="7" [2023-04-13 05:43:04] [2023-04-13 05:43:04] 2023-04-13 03:42:52,138 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************** [2023-04-13 05:43:04] 2023-04-13 03:42:52,641 | DEBUG | pilot.util.monitoring | check_local_space | checking local space on /var/lib/boinc_data/boinc-01/slots/3 [2023-04-13 05:43:04] 2023-04-13 03:42:52,642 | INFO | pilot.util.container | print_executable | executing command: df -mP /var/lib/boinc_data/boinc-01/slots/3 [2023-04-13 05:43:04] 2023-04-13 03:42:52,644 | WARNING | pilot.control.monitor | get_max_running_time | queuedata could not be extracted from queues, will use default for max running time (324000s) [2023-04-13 05:43:04] 2023-04-13 03:42:52,698 | DEBUG | pilot.util.workernode | get_local_disk_space | stdout=Filesystem 1048576-blocks Used Available Capacity Mounted on [2023-04-13 05:43:04] /dev/sda5 62572 31069 28294 53% /var/lib/boinc_data/boinc-01/slots/3 [2023-04-13 05:43:04] 2023-04-13 03:42:52,699 | DEBUG | pilot.util.workernode | get_local_disk_space | stderr= [2023-04-13 05:43:04] 2023-04-13 03:42:52,700 | INFO | pilot.util.monitoring | check_local_space | sufficient remaining disk space (29668409344 B) [2023-04-13 05:43:04] 2023-04-13 03:42:52,700 | WARNING | pilot.control.job | proceed_with_getjob | since timefloor is set to 0, pilot was only allowed to run one job [2023-04-13 05:43:04] 2023-04-13 03:42:52,701 | DEBUG | pilot.control.job | retrieve | will not set job_aborted yet [2023-04-13 05:43:04] 2023-04-13 03:42:52,701 | WARNING | pilot.util.common | should_abort | data:queue_monitoring:received graceful stop - abort after this iteration [2023-04-13 05:43:04] 2023-04-13 03:42:52,701 | INFO | pilot.control.job | retrieve | [job] retrieve thread has finished [2023-04-13 05:43:04] 2023-04-13 03:42:52,793 | DEBUG | pilot.control.payload | execute_payloads | will not set job_aborted yet [2023-04-13 05:43:04] 2023-04-13 03:42:52,793 | INFO | pilot.control.payload | execute_payloads | [payload] execute_payloads thread has finished [2023-04-13 05:43:04] 2023-04-13 03:42:52,807 | DEBUG | pilot.control.payload | validate_pre | will not set job_aborted yet [2023-04-13 05:43:04] 2023-04-13 03:42:52,807 | INFO | pilot.control.payload | validate_pre | [payload] validate_pre thread has finished [2023-04-13 05:43:04] 2023-04-13 03:42:52,812 | DEBUG | pilot.control.job | create_data_payload | will not set job_aborted yet [2023-04-13 05:43:04] 2023-04-13 03:42:52,813 | INFO | pilot.control.job | create_data_payload | [job] create_data_payload thread has finished [2023-04-13 05:43:04] 2023-04-13 03:42:52,825 | DEBUG | pilot.control.payload | control | payload control ending since graceful_stop has been set [2023-04-13 05:43:04] 2023-04-13 03:42:52,826 | DEBUG | pilot.control.payload | control | will not set job_aborted yet [2023-04-13 05:43:04] 2023-04-13 03:42:52,826 | INFO | pilot.control.payload | control | [payload] control thread has finished [2023-04-13 05:43:04] 2023-04-13 03:42:52,832 | DEBUG | pilot.control.payload | failed_post | will not set job_aborted yet [2023-04-13 05:43:04] 2023-04-13 03:42:52,833 | INFO | pilot.control.payload | failed_post | [payload] failed_post thread has finished [2023-04-13 05:43:04] 2023-04-13 03:42:52,873 | DEBUG | pilot.control.job | validate | will not set job_aborted yet [2023-04-13 05:43:04] 2023-04-13 03:42:52,873 | INFO | pilot.control.job | validate | [job] validate thread has finished [2023-04-13 05:43:04] 2023-04-13 03:42:53,047 | WARNING | pilot.util.common | should_abort | data:copytool_out:received graceful stop - abort after this iteration [2023-04-13 05:43:04] 2023-04-13 03:42:53,439 | DEBUG | pilot.control.payload | validate_post | will not set job_aborted yet [2023-04-13 05:43:04] 2023-04-13 03:42:53,439 | INFO | pilot.control.payload | validate_post | [payload] validate_post thread has finished [2023-04-13 05:43:04] 2023-04-13 03:42:53,531 | DEBUG | pilot.control.data | copytool_in | will not set job_aborted yet [2023-04-13 05:43:04] 2023-04-13 03:42:53,531 | INFO | pilot.control.data | copytool_in | [data] copytool_in thread has finished [2023-04-13 05:43:04] 2023-04-13 03:42:53,614 | DEBUG | pilot.control.data | control | data control ending since graceful_stop has been set [2023-04-13 05:43:04] 2023-04-13 03:42:53,614 | DEBUG | pilot.control.data | control | will not set job_aborted yet [2023-04-13 05:43:04] 2023-04-13 03:42:53,614 | INFO | pilot.control.data | control | [data] control thread has finished [2023-04-13 05:43:04] 2023-04-13 03:42:53,650 | INFO | pilot.control.monitor | control | [monitor] control thread has ended [2023-04-13 05:43:04] 2023-04-13 03:42:53,922 | DEBUG | pilot.control.job | control | job control ending since graceful_stop has been set [2023-04-13 05:43:04] 2023-04-13 03:42:53,922 | DEBUG | pilot.control.job | control | will not set job_aborted yet [2023-04-13 05:43:04] 2023-04-13 03:42:53,922 | INFO | pilot.control.job | control | [job] control thread has finished [2023-04-13 05:43:04] 2023-04-13 03:42:54,047 | DEBUG | pilot.control.data | copytool_out | will not set job_aborted yet [2023-04-13 05:43:04] 2023-04-13 03:42:54,047 | INFO | pilot.control.data | copytool_out | [data] copytool_out thread has finished [2023-04-13 05:43:04] 2023-04-13 03:42:54,820 | WARNING | pilot.util.common | should_abort | job:queue_monitor:received graceful stop - abort after this iteration [2023-04-13 05:43:04] 2023-04-13 03:42:54,821 | DEBUG | pilot.control.job | queue_monitor | will not set job_aborted yet [2023-04-13 05:43:04] 2023-04-13 03:42:54,821 | INFO | pilot.control.job | queue_monitor | [job] queue monitor thread has finished [2023-04-13 05:43:04] 2023-04-13 03:42:55,703 | DEBUG | pilot.control.data | queue_monitoring | will not set job_aborted yet [2023-04-13 05:43:04] 2023-04-13 03:42:55,703 | INFO | pilot.control.data | queue_monitoring | [data] queue_monitor thread has finished [2023-04-13 05:43:04] 2023-04-13 03:43:03,094 | INFO | pilot.control.payload | get_logging_info | job.realtimelogging is not enabled [2023-04-13 05:43:04] 2023-04-13 03:43:03,094 | DEBUG | pilot.control.payload | run_realtimelog | real-time logging not needed at this point [2023-04-13 05:43:04] 2023-04-13 03:43:03,094 | DEBUG | pilot.control.payload | run_realtimelog | realtime logger was not found, waiting .. [2023-04-13 05:43:04] 2023-04-13 03:43:03,094 | DEBUG | pilot.control.payload | run_realtimelog | will not set job_aborted yet [2023-04-13 05:43:04] 2023-04-13 03:43:03,094 | INFO | pilot.control.payload | run_realtimelog | [payload] run_realtimelog thread has finished [2023-04-13 05:43:04] 2023-04-13 03:43:03,439 | DEBUG | pilot.util.processes | threads_aborted | aborting since only the main Pilot thread is still running (total thread count=1 with 0 daemon threa [2023-04-13 05:43:04] 2023-04-13 03:43:03,439 | DEBUG | pilot.workflow.generic | run | all relevant threads have aborted (thread count=1) [2023-04-13 05:43:04] 2023-04-13 03:43:03,439 | INFO | pilot.workflow.generic | run | end of generic workflow (traces error code: 0) [2023-04-13 05:43:04] 2023-04-13 03:43:03,439 | INFO | root | wrap_up | traces error code: 0 [2023-04-13 05:43:04] 2023-04-13 03:43:03,439 | INFO | root | wrap_up | pilot has finished [2023-04-13 05:43:04] 2023-04-13 03:43:03,510 [wrapper] ==== pilot stdout END ==== [2023-04-13 05:43:04] 2023-04-13 03:43:03,537 [wrapper] ==== wrapper stdout RESUME ==== [2023-04-13 05:43:04] 2023-04-13 03:43:03,561 [wrapper] pilotpid: 1689924 [2023-04-13 05:43:04] 2023-04-13 03:43:03,594 [wrapper] Pilot exit status: 0 [2023-04-13 05:43:04] 2023-04-13 03:43:03,670 [wrapper] pandaids: 5817333075 [2023-04-13 05:43:04] 2023-04-13 03:43:03,720 [wrapper] apfmon messages muted [2023-04-13 05:43:04] 2023-04-13 03:43:03,739 [wrapper] Test setup, not cleaning [2023-04-13 05:43:04] 2023-04-13 03:43:03,761 [wrapper] ==== wrapper stdout END ==== [2023-04-13 05:43:04] 2023-04-13 03:43:03,783 [wrapper] ==== wrapper stderr END ==== [2023-04-13 05:43:04] 2023-04-13 03:43:03,844 [wrapper] wrapperexiting ec=0, duration=1313 [2023-04-13 05:43:04] 2023-04-13 03:43:03,877 [wrapper] apfmon messages muted [2023-04-13 05:43:04] *** Error codes and diagnostics *** [2023-04-13 05:43:04] "exeErrorCode": 0, [2023-04-13 05:43:04] "exeErrorDiag": "", [2023-04-13 05:43:04] "pilotErrorCode": 0, [2023-04-13 05:43:04] "pilotErrorDiag": "", [2023-04-13 05:43:04] *** Listing of results directory *** [2023-04-13 05:43:04] insgesamt 45744 [2023-04-13 05:43:04] -rw-r--r-- 1 yeti yeti 4388 Apr 13 05:18 queuedata.json [2023-04-13 05:43:04] -rwx------ 1 yeti yeti 27540 Apr 13 05:20 runpilot2-wrapper.sh [2023-04-13 05:43:04] -rw-r--r-- 1 yeti yeti 403260 Apr 13 05:20 pilot3.tar.gz [2023-04-13 05:43:04] -rw-rw-r-- 1 yeti yeti 107 Apr 13 05:21 wrapper_26015_x86_64-pc-linux-gnu [2023-04-13 05:43:04] -rwxr-xr-x 1 yeti yeti 7986 Apr 13 05:21 run_atlas [2023-04-13 05:43:04] -rw-rw-r-- 1 yeti yeti 112 Apr 13 05:21 job.xml [2023-04-13 05:43:04] -rw-r--r-- 2 yeti yeti 17632 Apr 13 05:21 start_atlas.sh [2023-04-13 05:43:04] drwxrwx--x 2 yeti yeti 4096 Apr 13 05:21 shared [2023-04-13 05:43:04] -rw-r--r-- 2 yeti yeti 414773 Apr 13 05:21 input.tar.gz [2023-04-13 05:43:04] -rw-rw-r-- 1 yeti yeti 6443 Apr 13 05:21 init_data.xml [2023-04-13 05:43:04] -rw-r--r-- 2 yeti yeti 38019645 Apr 13 05:21 EVNT.04972714._000023.pool.root.1 [2023-04-13 05:43:04] -rw-rw-r-- 1 yeti yeti 0 Apr 13 05:21 boinc_lockfile [2023-04-13 05:43:04] -rw-rw-r-- 1 yeti yeti 2657 Apr 13 05:21 pandaJob.out [2023-04-13 05:43:04] -rw------- 1 yeti yeti 424 Apr 13 05:21 setup.sh.local [2023-04-13 05:43:04] -rw------- 1 yeti yeti 1013942 Apr 13 05:21 agis_schedconf.cvmfs.json [2023-04-13 05:43:04] -rw------- 1 yeti yeti 1440294 Apr 13 05:22 cric_ddmendpoints.json [2023-04-13 05:43:04] drwx------ 4 yeti yeti 4096 Apr 13 05:23 pilot3 [2023-04-13 05:43:04] -rw-rw-r-- 1 yeti yeti 532 Apr 13 05:31 boinc_task_state.xml [2023-04-13 05:43:04] -rw------- 1 yeti yeti 1827282 Apr 13 05:35 output.1.e3e70cb4-fbb5-44b0-b1a5-7628a90e8ce9_94689.pool.root [2023-04-13 05:43:04] -rw------- 1 yeti yeti 1001 Apr 13 05:35 memory_monitor_summary.json [2023-04-13 05:43:04] -rw------- 1 yeti yeti 444760 Apr 13 05:39 e3e70cb4-fbb5-44b0-b1a5-7628a90e8ce9_94689.1.job.log.tgz [2023-04-13 05:43:04] -rw------- 1 yeti yeti 7734 Apr 13 05:42 heartbeat.json [2023-04-13 05:43:04] -rw-rw-r-- 1 yeti yeti 8192 Apr 13 05:43 boinc_mmap_file [2023-04-13 05:43:04] -rw-rw-r-- 1 yeti yeti 25 Apr 13 05:43 wrapper_checkpoint.txt [2023-04-13 05:43:04] -rw------- 1 yeti yeti 9088 Apr 13 05:43 pilotlog.txt [2023-04-13 05:43:04] -rw------- 1 yeti yeti 384606 Apr 13 05:43 e3e70cb4-fbb5-44b0-b1a5-7628a90e8ce9_94689.1.job.log [2023-04-13 05:43:04] -rw------- 1 yeti yeti 464 Apr 13 05:43 output.list [2023-04-13 05:43:04] -rw-rw-r-- 1 yeti yeti 748 Apr 13 05:43 runtime_log [2023-04-13 05:43:04] -rw------- 1 yeti yeti 2672640 Apr 13 05:43 result.tar.gz [2023-04-13 05:43:04] -rw-rw-r-- 1 yeti yeti 12223 Apr 13 05:43 runtime_log.err [2023-04-13 05:43:04] -rw------- 1 yeti yeti 623 Apr 13 05:43 rbAMDmLg262n7Olcko1bjSoqABFKDmABFKDm7AsVDmsZHKDmKzvHIn.diag [2023-04-13 05:43:04] -rw-rw-r-- 1 yeti yeti 29271 Apr 13 05:43 stderr.txt [2023-04-13 05:43:04] HITS file was successfully produced: [2023-04-13 05:43:04] -rw------- 1 yeti yeti 1827282 Apr 13 05:35 shared/HITS.pool.root.1 [2023-04-13 05:43:04] *** Contents of shared directory: *** [2023-04-13 05:43:04] insgesamt 41960 [2023-04-13 05:43:04] -rw-r--r-- 2 yeti yeti 17632 Apr 13 05:21 start_atlas.sh [2023-04-13 05:43:04] -rw-r--r-- 2 yeti yeti 414773 Apr 13 05:21 input.tar.gz [2023-04-13 05:43:04] -rw-r--r-- 2 yeti yeti 38019645 Apr 13 05:21 ATLAS.root_0 [2023-04-13 05:43:04] -rw------- 1 yeti yeti 1827282 Apr 13 05:35 HITS.pool.root.1 [2023-04-13 05:43:04] -rw------- 1 yeti yeti 2672640 Apr 13 05:43 result.tar.gz 05:43:05 (1686329): run_atlas exited; CPU time 392.544749 05:43:05 (1686329): called boinc_finish(0) </stderr_txt> ]]>
©2024 CERN