| Name | qrGODm4iB72n7Olcko1bjSoqABFKDmABFKDm7AsVDmTcHKDmYwByRo_0 |
| Workunit | 2299366 |
| Created | 13 Apr 2023, 12:59:32 UTC |
| Sent | 13 Apr 2023, 13:00:01 UTC |
| Report deadline | 20 Apr 2023, 13:00:01 UTC |
| Received | 13 Apr 2023, 13:21:03 UTC |
| Server state | Over |
| Outcome | Success |
| Client state | Done |
| Exit status | 0 (0x00000000) |
| Computer ID | 4842 |
| Run time | 20 min 38 sec |
| CPU time | 7 min 7 sec |
| Validate state | Valid |
| Credit | 29.09 |
| Device peak FLOPS | 2.00 GFLOPS |
| Application version | ATLAS Simulation v3.01 (native_mt) x86_64-pc-linux-gnu |
| Peak working set size | 1.40 GB |
| Peak swap size | 2.13 GB |
| Peak disk usage | 83.04 MB |
Stderr output
<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:00:10 (2073995): wrapper (7.7.26015): starting
15:00:10 (2073995): wrapper: running run_atlas (--nthreads 2)
[2023-04-13 15:00:10] Arguments: --nthreads 2
[2023-04-13 15:00:10] Threads: 2
[2023-04-13 15:00:10] Checking for CVMFS
[2023-04-13 15:00:10] Probing /cvmfs/atlas.cern.ch... OK
[2023-04-13 15:00:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2023-04-13 15:00:11] Running cvmfs_config stat atlas.cern.ch
[2023-04-13 15:00:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2023-04-13 15:00:11] 2.9.4.0 309325 20107 110544 117884 1 232 6208753 10240001 2700 130560 2 84683286 99.965 6701205 2863 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.101:3128 1
[2023-04-13 15:00:11] CVMFS is ok
[2023-04-13 15:00:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2023-04-13 15:00:11] Checking for apptainer binary...
[2023-04-13 15:00:11] Using apptainer found in PATH at /usr/bin/apptainer
[2023-04-13 15:00:11] Running /usr/bin/apptainer --version
[2023-04-13 15:00:11] apptainer version 1.1.0-rc.2
[2023-04-13 15:00:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2023-04-13 15:00:11] ellievl
[2023-04-13 15:00:11] apptainer works
[2023-04-13 15:00:11] Set ATHENA_PROC_NUMBER=2
[2023-04-13 15:00:11] Set ATHENA_CORE_NUMBER=2
[2023-04-13 15:00:11] Starting ATLAS job with PandaID=5817865899
[2023-04-13 15:00:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc_data/boinc-01/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2023-04-13 15:20:46] *** The last 200 lines of the pilot log: ***
[2023-04-13 15:20:46] 2023-04-13 13:20:21,794 | INFO | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard memory fields from prmon json
[2023-04-13 15:20:46] 2023-04-13 13:20:21,794 | INFO | pilot.util.timing | timing_report | ..............................
[2023-04-13 15:20:46] 2023-04-13 13:20:21,794 | INFO | pilot.util.timing | timing_report | . Timing measurements:
[2023-04-13 15:20:46] 2023-04-13 13:20:21,794 | INFO | pilot.util.timing | timing_report | . get job = 55 s
[2023-04-13 15:20:46] 2023-04-13 13:20:21,794 | INFO | pilot.util.timing | timing_report | . initial setup = 73 s
[2023-04-13 15:20:46] 2023-04-13 13:20:21,794 | INFO | pilot.util.timing | timing_report | . payload setup = 24 s
[2023-04-13 15:20:46] 2023-04-13 13:20:21,794 | INFO | pilot.util.timing | timing_report | . stage-in = 59 s
[2023-04-13 15:20:46] 2023-04-13 13:20:21,795 | INFO | pilot.util.timing | timing_report | . payload execution = 582 s
[2023-04-13 15:20:46] 2023-04-13 13:20:21,795 | INFO | pilot.util.timing | timing_report | . stage-out = 373 s
[2023-04-13 15:20:46] 2023-04-13 13:20:21,795 | INFO | pilot.util.timing | timing_report | ..............................
[2023-04-13 15:20:46] 2023-04-13 13:20:21,795 | DEBUG | pilot.control.job | send_state | data={'jobId': '5817865899', 'state': 'finished', 'timestamp': '2023-04-13T15:20:21+01:00', 'siteNam
[2023-04-13 15:20:46] 2023-04-13 13:20:21,795 | DEBUG | pilot.control.job | write_heartbeat_to_file | heartbeat dictionary: {'jobId': '5817865899', 'state': 'finished', 'timestamp': '2023-04-13T15:20:21
[2023-04-13 15:20:46] 2023-04-13 13:20:21,795 | DEBUG | pilot.control.job | write_heartbeat_to_file | wrote heartbeat to file: /var/lib/boinc_data/boinc-01/slots/3/heartbeat.json
[2023-04-13 15:20:46] 2023-04-13 13:20:21,893 | INFO | pilot.control.job | make_job_report |
[2023-04-13 15:20:46] 2023-04-13 13:20:21,893 | INFO | pilot.control.job | make_job_report | job summary report
[2023-04-13 15:20:46] 2023-04-13 13:20:21,893 | INFO | pilot.control.job | make_job_report | --------------------------------------------------
[2023-04-13 15:20:46] 2023-04-13 13:20:21,893 | INFO | pilot.control.job | make_job_report | PanDA job id: 5817865899
[2023-04-13 15:20:46] 2023-04-13 13:20:21,893 | INFO | pilot.control.job | make_job_report | task id: NULL
[2023-04-13 15:20:46] 2023-04-13 13:20:21,893 | INFO | pilot.control.job | make_job_report | errors: (none)
[2023-04-13 15:20:46] 2023-04-13 13:20:21,893 | INFO | pilot.control.job | make_job_report | status: LOG_TRANSFER = DONE
[2023-04-13 15:20:46] 2023-04-13 13:20:21,893 | INFO | pilot.control.job | make_job_report | pilot state: finished
[2023-04-13 15:20:46] 2023-04-13 13:20:21,893 | INFO | pilot.control.job | make_job_report | transexitcode: 0
[2023-04-13 15:20:46] 2023-04-13 13:20:21,893 | INFO | pilot.control.job | make_job_report | exeerrorcode: 0
[2023-04-13 15:20:46] 2023-04-13 13:20:21,893 | INFO | pilot.control.job | make_job_report | exeerrordiag:
[2023-04-13 15:20:46] 2023-04-13 13:20:21,893 | INFO | pilot.control.job | make_job_report | exitcode: 0
[2023-04-13 15:20:46] 2023-04-13 13:20:21,893 | INFO | pilot.control.job | make_job_report | exitmsg: OK
[2023-04-13 15:20:46] 2023-04-13 13:20:21,893 | INFO | pilot.control.job | make_job_report | cpuconsumptiontime: 516 s
[2023-04-13 15:20:46] 2023-04-13 13:20:21,893 | INFO | pilot.control.job | make_job_report | nevents: 2
[2023-04-13 15:20:46] 2023-04-13 13:20:21,893 | INFO | pilot.control.job | make_job_report | neventsw: 0
[2023-04-13 15:20:46] 2023-04-13 13:20:21,893 | INFO | pilot.control.job | make_job_report | pid: 2081172
[2023-04-13 15:20:46] 2023-04-13 13:20:21,893 | INFO | pilot.control.job | make_job_report | pgrp: 2081172
[2023-04-13 15:20:46] 2023-04-13 13:20:21,893 | INFO | pilot.control.job | make_job_report | corecount: 2
[2023-04-13 15:20:46] 2023-04-13 13:20:21,893 | INFO | pilot.control.job | make_job_report | event service: False
[2023-04-13 15:20:46] 2023-04-13 13:20:21,893 | INFO | pilot.control.job | make_job_report | sizes: {0: 2564384, 11: 2564530, 22: 2564558, 32: 2564586, 43: 2564614, 53: 2564642, 60: 2564858, 64
[2023-04-13 15:20:46] 2023-04-13 13:20:21,894 | INFO | pilot.control.job | make_job_report | --------------------------------------------------
[2023-04-13 15:20:46] 2023-04-13 13:20:21,894 | INFO | pilot.control.job | make_job_report |
[2023-04-13 15:20:46] 2023-04-13 13:20:21,894 | DEBUG | pilot.control.job | has_job_completed | ls -lF /var/lib/boinc_data/boinc-01/slots/3:
[2023-04-13 15:20:46]
[2023-04-13 15:20:46] 2023-04-13 13:20:21,894 | INFO | pilot.util.container | print_executable | executing command: ls -lF /var/lib/boinc_data/boinc-01/slots/3
[2023-04-13 15:20:46] 2023-04-13 13:20:21,951 | DEBUG | pilot.control.job | has_job_completed | total 43392
[2023-04-13 15:20:46] -rw------- 1 yeti yeti 346450 Apr 13 15:20 2bdc0808-d580-4eb3-b65b-d0905188a7f4_71002.1.job.log
[2023-04-13 15:20:46] -rw------- 1 yeti yeti 442402 Apr 13 15:17 2bdc0808-d580-4eb3-b65b-d0905188a7f4_71002.1.job.log.tgz
[2023-04-13 15:20:46] -rw-r--r-- 2 yeti yeti 38019645 Apr 13 15:00 EVNT.04972714._000023.pool.root.1
[2023-04-13 15:20:46] drwxrwx--- 3 yeti yeti 4096 Apr 13 15:20 PanDA_Pilot-5817865899/
[2023-04-13 15:20:46] -rw------- 1 yeti yeti 1013206 Apr 13 15:01 agis_schedconf.cvmfs.json
[2023-04-13 15:20:46] -rw-rw-r-- 1 yeti yeti 0 Apr 13 15:00 boinc_lockfile
[2023-04-13 15:20:46] -rw-rw-r-- 1 yeti yeti 8192 Apr 13 15:20 boinc_mmap_file
[2023-04-13 15:20:46] -rw-rw-r-- 1 yeti yeti 532 Apr 13 15:10 boinc_task_state.xml
[2023-04-13 15:20:46] -rw------- 1 yeti yeti 1440294 Apr 13 15:01 cric_ddmendpoints.json
[2023-04-13 15:20:46] -rw------- 1 yeti yeti 7743 Apr 13 15:20 heartbeat.json
[2023-04-13 15:20:46] -rw-rw-r-- 1 yeti yeti 6443 Apr 13 15:00 init_data.xml
[2023-04-13 15:20:46] -rw-r--r-- 2 yeti yeti 414770 Apr 13 15:00 input.tar.gz
[2023-04-13 15:20:46] -rw-rw-r-- 1 yeti yeti 112 Apr 13 15:00 job.xml
[2023-04-13 15:20:46] -rw------- 1 yeti yeti 1002 Apr 13 15:14 memory_monitor_summary.json
[2023-04-13 15:20:46] -rw------- 1 yeti yeti 1827299 Apr 13 15:13 output.1.2bdc0808-d580-4eb3-b65b-d0905188a7f4_71002.pool.root
[2023-04-13 15:20:46] -rw------- 1 yeti yeti 464 Apr 13 15:20 output.list
[2023-04-13 15:20:46] -rw-rw-r-- 1 yeti yeti 2657 Apr 13 15:00 pandaJob.out
[2023-04-13 15:20:46] drwx------ 4 yeti yeti 4096 Apr 13 15:02 pilot3/
[2023-04-13 15:20:46] -rw-r--r-- 1 yeti yeti 403260 Apr 13 14:59 pilot3.tar.gz
[2023-04-13 15:20:46] -rw------- 1 yeti yeti 332940 Apr 13 15:20 pilotlog.txt
[2023-04-13 15:20:46] -rw------- 1 yeti yeti 143 Apr 13 15:00 qrGODm4iB72n7Olcko1bjSoqABFKDmABFKDm7AsVDmTcHKDmYwByRo.diag
[2023-04-13 15:20:46] -rw-r--r-- 1 yeti yeti 4388 Apr 13 14:55 queuedata.json
[2023-04-13 15:20:46] -rwxr-xr-x 1 yeti yeti 7986 Apr 13 15:00 run_atlas*
[2023-04-13 15:20:46] -rwx------ 1 yeti yeti 27540 Apr 13 14:59 runpilot2-wrapper.sh*
[2023-04-13 15:20:46] -rw-rw-r-- 1 yeti yeti 407 Apr 13 15:00 runtime_log
[2023-04-13 15:20:46] -rw-rw-r-- 1 yeti yeti 7967 Apr 13 15:00 runtime_log.err
[2023-04-13 15:20:46] -rw------- 1 yeti yeti 424 Apr 13 15:00 setup.sh.local
[2023-04-13 15:20:46] drwxrwx--x 2 yeti yeti 4096 Apr 13 15:00 shared/
[2023-04-13 15:20:46] -rw-r--r-- 2 yeti yeti 17632 Apr 13 15:00 start_atlas.sh
[2023-04-13 15:20:46] -rw-rw-r-- 1 yeti yeti 1769 Apr 13 15:00 stderr.txt
[2023-04-13 15:20:46] -rw-rw-r-- 1 yeti yeti 107 Apr 13 15:00 wrapper_26015_x86_64-pc-linux-gnu
[2023-04-13 15:20:46] -rw-rw-r-- 1 yeti yeti 25 Apr 13 15:20 wrapper_checkpoint.txt
[2023-04-13 15:20:46] 2023-04-13 13:20:21,951 | INFO | pilot.util.queuehandling | queue_report | queue jobs had 0 job(s) [purged]
[2023-04-13 15:20:46] 2023-04-13 13:20:21,951 | INFO | pilot.util.queuehandling | queue_report | queue payloads had 0 job(s) [purged]
[2023-04-13 15:20:46] 2023-04-13 13:20:21,951 | INFO | pilot.util.queuehandling | queue_report | queue data_in had 0 job(s) [purged]
[2023-04-13 15:20:46] 2023-04-13 13:20:21,951 | INFO | pilot.util.queuehandling | queue_report | queue data_out had 0 job(s) [purged]
[2023-04-13 15:20:46] 2023-04-13 13:20:21,951 | INFO | pilot.util.queuehandling | queue_report | queue current_data_in had 0 job(s) [purged]
[2023-04-13 15:20:46] 2023-04-13 13:20:21,951 | INFO | pilot.util.queuehandling | queue_report | queue validated_jobs had 0 job(s) [purged]
[2023-04-13 15:20:46] 2023-04-13 13:20:21,951 | INFO | pilot.util.queuehandling | queue_report | queue validated_payloads had 0 job(s) [purged]
[2023-04-13 15:20:46] 2023-04-13 13:20:21,951 | INFO | pilot.util.queuehandling | queue_report | queue monitored_payloads had 0 job(s) [purged]
[2023-04-13 15:20:46] 2023-04-13 13:20:21,951 | INFO | pilot.util.queuehandling | queue_report | queue finished_jobs had 0 job(s) [purged]
[2023-04-13 15:20:46] 2023-04-13 13:20:21,951 | INFO | pilot.util.queuehandling | queue_report | queue finished_payloads had 0 job(s) [purged]
[2023-04-13 15:20:46] 2023-04-13 13:20:21,951 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_in had 1 job(s) [purged]
[2023-04-13 15:20:46] 2023-04-13 13:20:21,951 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_out had 0 job(s) [purged]
[2023-04-13 15:20:46] 2023-04-13 13:20:21,952 | INFO | pilot.util.queuehandling | queue_report | queue failed_jobs had 0 job(s) [purged]
[2023-04-13 15:20:46] 2023-04-13 13:20:21,952 | INFO | pilot.util.queuehandling | queue_report | queue failed_payloads had 0 job(s) [purged]
[2023-04-13 15:20:46] 2023-04-13 13:20:21,952 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_in had 0 job(s) [purged]
[2023-04-13 15:20:46] 2023-04-13 13:20:21,952 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_out had 0 job(s) [purged]
[2023-04-13 15:20:46] 2023-04-13 13:20:21,952 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobs had 0 job(s) [purged]
[2023-04-13 15:20:46] 2023-04-13 13:20:21,952 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobids has 1 job(s)
[2023-04-13 15:20:46] 2023-04-13 13:20:21,952 | INFO | pilot.util.queuehandling | queue_report | queue realtimelog_payloads had 0 job(s) [purged]
[2023-04-13 15:20:46] 2023-04-13 13:20:21,952 | INFO | pilot.util.queuehandling | queue_report | queue messages had 0 job(s) [purged]
[2023-04-13 15:20:46] 2023-04-13 13:20:21,952 | INFO | pilot.control.job | has_job_completed | job 5817865899 has completed (purged errors)
[2023-04-13 15:20:46] 2023-04-13 13:20:21,952 | DEBUG | pilot.util.realtimelogger | cleanup | attempting real-time logger cleanup
[2023-04-13 15:20:46] 2023-04-13 13:20:21,952 | INFO | pilot.util.processes | cleanup | overall cleanup function is called
[2023-04-13 15:20:46] 2023-04-13 13:20:21,955 | DEBUG | pilot.util.processes | cleanup | work directory was removed: /var/lib/boinc_data/boinc-01/slots/3/PanDA_Pilot-5817865899
[2023-04-13 15:20:46] 2023-04-13 13:20:22,961 | INFO | pilot.info.jobdata | collect_zombies | --- collectZombieJob: --- 10, [2081172]
[2023-04-13 15:20:46] 2023-04-13 13:20:22,961 | INFO | pilot.info.jobdata | collect_zombies | zombie collector trying to kill pid 2081172
[2023-04-13 15:20:46] 2023-04-13 13:20:22,961 | INFO | pilot.info.jobdata | collect_zombies | harmless exception when collecting zombies: [Errno 10] No child processes
[2023-04-13 15:20:46] 2023-04-13 13:20:23,224 | WARNING | pilot.control.monitor | get_max_running_time | queuedata could not be extracted from queues, will use default for max running time (324000s)
[2023-04-13 15:20:46] 2023-04-13 13:20:23,967 | INFO | pilot.util.processes | cleanup | collected zombie processes
[2023-04-13 15:20:46] 2023-04-13 13:20:23,967 | INFO | pilot.util.processes | cleanup | will now attempt to kill all subprocesses of pid=2081172
[2023-04-13 15:20:46] 2023-04-13 13:20:24,078 | INFO | pilot.util.processes | kill_processes | process IDs to be killed: [2081172] (in reverse order)
[2023-04-13 15:20:46] 2023-04-13 13:20:24,195 | WARNING | pilot.util.processes | kill_processes | found no corresponding commands to process id(s)
[2023-04-13 15:20:46] 2023-04-13 13:20:24,198 | INFO | pilot.util.processes | kill_orphans | Do not look for orphan processes in BOINC jobs
[2023-04-13 15:20:46] 2023-04-13 13:20:24,198 | DEBUG | pilot.util.queuehandling | purge_queue | queue purged
[2023-04-13 15:20:46] 2023-04-13 13:20:24,199 | INFO | pilot.control.job | retrieve | ready for new job
[2023-04-13 15:20:46] 2023-04-13 13:20:24,199 | INFO | root | retrieve | pilot has finished with previous job - re-establishing logging
[2023-04-13 15:20:46] 2023-04-13 13:20:24,199 | INFO | pilot.util.auxiliary | pilot_version_banner | ****************************************
[2023-04-13 15:20:46] 2023-04-13 13:20:24,200 | INFO | pilot.util.auxiliary | pilot_version_banner | *** PanDA Pilot version 3.6.0 (51) ***
[2023-04-13 15:20:46] 2023-04-13 13:20:24,200 | INFO | pilot.util.auxiliary | pilot_version_banner | ****************************************
[2023-04-13 15:20:46] 2023-04-13 13:20:24,200 | INFO | pilot.util.auxiliary | pilot_version_banner |
[2023-04-13 15:20:46] 2023-04-13 13:20:24,200 | INFO | pilot.util.auxiliary | pilot_version_banner | pilot is running in a VM
[2023-04-13 15:20:46] 2023-04-13 13:20:24,200 | INFO | pilot.util.auxiliary | display_architecture_info | architecture information:
[2023-04-13 15:20:46] 2023-04-13 13:20:24,201 | INFO | pilot.util.container | print_executable | executing command: cat /etc/os-release
[2023-04-13 15:20:46] 2023-04-13 13:20:24,276 | INFO | pilot.util.filehandling | dump | cat /etc/os-release:
[2023-04-13 15:20:46] NAME="CentOS Linux"
[2023-04-13 15:20:46] VERSION="7 (Core)"
[2023-04-13 15:20:46] ID="centos"
[2023-04-13 15:20:46] ID_LIKE="rhel fedora"
[2023-04-13 15:20:46] VERSION_ID="7"
[2023-04-13 15:20:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2023-04-13 15:20:46] ANSI_COLOR="0;31"
[2023-04-13 15:20:46] CPE_NAME="cpe:/o:centos:centos:7"
[2023-04-13 15:20:46] HOME_URL="https://www.centos.org/"
[2023-04-13 15:20:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2023-04-13 15:20:46]
[2023-04-13 15:20:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2023-04-13 15:20:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2023-04-13 15:20:46] REDHAT_SUPPORT_PRODUCT="centos"
[2023-04-13 15:20:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2023-04-13 15:20:46]
[2023-04-13 15:20:46] 2023-04-13 13:20:24,276 | INFO | pilot.util.auxiliary | pilot_version_banner | ****************************************
[2023-04-13 15:20:46] 2023-04-13 13:20:24,779 | DEBUG | pilot.util.monitoring | check_local_space | checking local space on /var/lib/boinc_data/boinc-01/slots/3
[2023-04-13 15:20:46] 2023-04-13 13:20:24,780 | INFO | pilot.util.container | print_executable | executing command: df -mP /var/lib/boinc_data/boinc-01/slots/3
[2023-04-13 15:20:46] 2023-04-13 13:20:24,840 | DEBUG | pilot.util.workernode | get_local_disk_space | stdout=Filesystem 1048576-blocks Used Available Capacity Mounted on
[2023-04-13 15:20:46] /dev/sda5 62572 31343 28019 53% /var/lib/boinc_data/boinc-01/slots/3
[2023-04-13 15:20:46] 2023-04-13 13:20:24,840 | DEBUG | pilot.util.workernode | get_local_disk_space | stderr=
[2023-04-13 15:20:46] 2023-04-13 13:20:24,841 | INFO | pilot.util.monitoring | check_local_space | sufficient remaining disk space (29380050944 B)
[2023-04-13 15:20:46] 2023-04-13 13:20:24,841 | WARNING | pilot.control.job | proceed_with_getjob | since timefloor is set to 0, pilot was only allowed to run one job
[2023-04-13 15:20:46] 2023-04-13 13:20:24,841 | DEBUG | pilot.control.job | retrieve | will not set job_aborted yet
[2023-04-13 15:20:46] 2023-04-13 13:20:24,841 | INFO | pilot.control.job | retrieve | [job] retrieve thread has finished
[2023-04-13 15:20:46] 2023-04-13 13:20:24,841 | WARNING | pilot.control.monitor | control | aborting monitor loop since graceful_stop has been set
[2023-04-13 15:20:46] 2023-04-13 13:20:24,842 | INFO | pilot.control.monitor | control | [monitor] control thread has ended
[2023-04-13 15:20:46] 2023-04-13 13:20:24,869 | DEBUG | pilot.control.job | validate | will not set job_aborted yet
[2023-04-13 15:20:46] 2023-04-13 13:20:24,869 | INFO | pilot.control.job | validate | [job] validate thread has finished
[2023-04-13 15:20:46] 2023-04-13 13:20:24,985 | WARNING | pilot.util.common | should_abort | data:copytool_out:received graceful stop - abort after this iteration
[2023-04-13 15:20:46] 2023-04-13 13:20:25,163 | DEBUG | pilot.control.payload | control | payload control ending since graceful_stop has been set
[2023-04-13 15:20:46] 2023-04-13 13:20:25,163 | DEBUG | pilot.control.payload | control | will not set job_aborted yet
[2023-04-13 15:20:46] 2023-04-13 13:20:25,163 | INFO | pilot.control.payload | control | [payload] control thread has finished
[2023-04-13 15:20:46] 2023-04-13 13:20:25,472 | DEBUG | pilot.control.job | create_data_payload | will not set job_aborted yet
[2023-04-13 15:20:46] 2023-04-13 13:20:25,473 | INFO | pilot.control.job | create_data_payload | [job] create_data_payload thread has finished
[2023-04-13 15:20:46] 2023-04-13 13:20:25,560 | DEBUG | pilot.control.payload | failed_post | will not set job_aborted yet
[2023-04-13 15:20:46] 2023-04-13 13:20:25,560 | INFO | pilot.control.payload | failed_post | [payload] failed_post thread has finished
[2023-04-13 15:20:46] 2023-04-13 13:20:25,573 | DEBUG | pilot.control.payload | validate_pre | will not set job_aborted yet
[2023-04-13 15:20:46] 2023-04-13 13:20:25,573 | INFO | pilot.control.payload | validate_pre | [payload] validate_pre thread has finished
[2023-04-13 15:20:46] 2023-04-13 13:20:25,761 | DEBUG | pilot.control.payload | execute_payloads | will not set job_aborted yet
[2023-04-13 15:20:46] 2023-04-13 13:20:25,761 | INFO | pilot.control.payload | execute_payloads | [payload] execute_payloads thread has finished
[2023-04-13 15:20:46] 2023-04-13 13:20:25,795 | DEBUG | pilot.control.data | control | data control ending since graceful_stop has been set
[2023-04-13 15:20:46] 2023-04-13 13:20:25,795 | DEBUG | pilot.control.data | control | will not set job_aborted yet
[2023-04-13 15:20:46] 2023-04-13 13:20:25,795 | INFO | pilot.control.data | control | [data] control thread has finished
[2023-04-13 15:20:46] 2023-04-13 13:20:25,815 | DEBUG | pilot.control.job | control | job control ending since graceful_stop has been set
[2023-04-13 15:20:46] 2023-04-13 13:20:25,815 | DEBUG | pilot.control.job | control | will not set job_aborted yet
[2023-04-13 15:20:46] 2023-04-13 13:20:25,816 | INFO | pilot.control.job | control | [job] control thread has finished
[2023-04-13 15:20:46] 2023-04-13 13:20:25,985 | DEBUG | pilot.control.data | copytool_out | will not set job_aborted yet
[2023-04-13 15:20:46] 2023-04-13 13:20:25,985 | INFO | pilot.control.data | copytool_out | [data] copytool_out thread has finished
[2023-04-13 15:20:46] 2023-04-13 13:20:26,086 | DEBUG | pilot.control.payload | validate_post | will not set job_aborted yet
[2023-04-13 15:20:46] 2023-04-13 13:20:26,086 | INFO | pilot.control.payload | validate_post | [payload] validate_post thread has finished
[2023-04-13 15:20:46] 2023-04-13 13:20:26,173 | DEBUG | pilot.control.data | copytool_in | will not set job_aborted yet
[2023-04-13 15:20:46] 2023-04-13 13:20:26,173 | INFO | pilot.control.data | copytool_in | [data] copytool_in thread has finished
[2023-04-13 15:20:46] 2023-04-13 13:20:26,868 | WARNING | pilot.util.common | should_abort | job:queue_monitor:received graceful stop - abort after this iteration
[2023-04-13 15:20:46] 2023-04-13 13:20:26,868 | DEBUG | pilot.control.job | queue_monitor | will not set job_aborted yet
[2023-04-13 15:20:46] 2023-04-13 13:20:26,868 | INFO | pilot.control.job | queue_monitor | [job] queue monitor thread has finished
[2023-04-13 15:20:46] 2023-04-13 13:20:27,667 | WARNING | pilot.util.common | should_abort | data:queue_monitoring:received graceful stop - abort after this iteration
[2023-04-13 15:20:46] 2023-04-13 13:20:30,669 | DEBUG | pilot.control.data | queue_monitoring | will not set job_aborted yet
[2023-04-13 15:20:46] 2023-04-13 13:20:30,669 | INFO | pilot.control.data | queue_monitoring | [data] queue_monitor thread has finished
[2023-04-13 15:20:46] 2023-04-13 13:20:37,776 | INFO | pilot.control.payload | get_logging_info | job.realtimelogging is not enabled
[2023-04-13 15:20:46] 2023-04-13 13:20:37,776 | DEBUG | pilot.control.payload | run_realtimelog | real-time logging not needed at this point
[2023-04-13 15:20:46] 2023-04-13 13:20:37,777 | DEBUG | pilot.control.payload | run_realtimelog | realtime logger was not found, waiting ..
[2023-04-13 15:20:46] 2023-04-13 13:20:37,777 | DEBUG | pilot.control.payload | run_realtimelog | will not set job_aborted yet
[2023-04-13 15:20:46] 2023-04-13 13:20:37,777 | INFO | pilot.control.payload | run_realtimelog | [payload] run_realtimelog thread has finished
[2023-04-13 15:20:46] 2023-04-13 13:20:44,447 | WARNING | pilot.control.job | check_job_monitor_waiting_time | no jobs in monitored_payloads queue (waited for 62 s)
[2023-04-13 15:20:46] 2023-04-13 13:20:44,447 | DEBUG | pilot.control.job | job_monitor | will not set job_aborted yet
[2023-04-13 15:20:46] 2023-04-13 13:20:44,447 | INFO | pilot.control.job | job_monitor | [job] job monitor thread has finished
[2023-04-13 15:20:46] 2023-04-13 13:20:45,372 | DEBUG | pilot.util.processes | threads_aborted | aborting since only the main Pilot thread is still running (total thread count=1 with 0 daemon threa
[2023-04-13 15:20:46] 2023-04-13 13:20:45,373 | DEBUG | pilot.workflow.generic | run | all relevant threads have aborted (thread count=1)
[2023-04-13 15:20:46] 2023-04-13 13:20:45,373 | INFO | pilot.workflow.generic | run | end of generic workflow (traces error code: 0)
[2023-04-13 15:20:46] 2023-04-13 13:20:45,373 | INFO | root | wrap_up | traces error code: 0
[2023-04-13 15:20:46] 2023-04-13 13:20:45,373 | INFO | root | wrap_up | pilot has finished
[2023-04-13 15:20:46] 2023-04-13 13:20:45,442 [wrapper] ==== pilot stdout END ====
[2023-04-13 15:20:46] 2023-04-13 13:20:45,471 [wrapper] ==== wrapper stdout RESUME ====
[2023-04-13 15:20:46] 2023-04-13 13:20:45,497 [wrapper] pilotpid: 2077669
[2023-04-13 15:20:46] 2023-04-13 13:20:45,526 [wrapper] Pilot exit status: 0
[2023-04-13 15:20:46] 2023-04-13 13:20:45,614 [wrapper] pandaids: 5817865899
[2023-04-13 15:20:46] 2023-04-13 13:20:45,667 [wrapper] apfmon messages muted
[2023-04-13 15:20:46] 2023-04-13 13:20:45,693 [wrapper] Test setup, not cleaning
[2023-04-13 15:20:46] 2023-04-13 13:20:45,728 [wrapper] ==== wrapper stdout END ====
[2023-04-13 15:20:46] 2023-04-13 13:20:45,752 [wrapper] ==== wrapper stderr END ====
[2023-04-13 15:20:46] 2023-04-13 13:20:45,793 [wrapper] wrapperexiting ec=0, duration=1234
[2023-04-13 15:20:46] 2023-04-13 13:20:45,817 [wrapper] apfmon messages muted
[2023-04-13 15:20:46] *** Error codes and diagnostics ***
[2023-04-13 15:20:46] "exeErrorCode": 0,
[2023-04-13 15:20:46] "exeErrorDiag": "",
[2023-04-13 15:20:46] "pilotErrorCode": 0,
[2023-04-13 15:20:46] "pilotErrorDiag": "",
[2023-04-13 15:20:46] *** Listing of results directory ***
[2023-04-13 15:20:46] insgesamt 45708
[2023-04-13 15:20:46] -rw-r--r-- 1 yeti yeti 4388 Apr 13 14:55 queuedata.json
[2023-04-13 15:20:46] -rwx------ 1 yeti yeti 27540 Apr 13 14:59 runpilot2-wrapper.sh
[2023-04-13 15:20:46] -rw-r--r-- 1 yeti yeti 403260 Apr 13 14:59 pilot3.tar.gz
[2023-04-13 15:20:46] -rw-rw-r-- 1 yeti yeti 107 Apr 13 15:00 wrapper_26015_x86_64-pc-linux-gnu
[2023-04-13 15:20:46] -rwxr-xr-x 1 yeti yeti 7986 Apr 13 15:00 run_atlas
[2023-04-13 15:20:46] -rw-rw-r-- 1 yeti yeti 112 Apr 13 15:00 job.xml
[2023-04-13 15:20:46] -rw-r--r-- 2 yeti yeti 17632 Apr 13 15:00 start_atlas.sh
[2023-04-13 15:20:46] drwxrwx--x 2 yeti yeti 4096 Apr 13 15:00 shared
[2023-04-13 15:20:46] -rw-r--r-- 2 yeti yeti 414770 Apr 13 15:00 input.tar.gz
[2023-04-13 15:20:46] -rw-rw-r-- 1 yeti yeti 6443 Apr 13 15:00 init_data.xml
[2023-04-13 15:20:46] -rw-r--r-- 2 yeti yeti 38019645 Apr 13 15:00 EVNT.04972714._000023.pool.root.1
[2023-04-13 15:20:46] -rw-rw-r-- 1 yeti yeti 0 Apr 13 15:00 boinc_lockfile
[2023-04-13 15:20:46] -rw-rw-r-- 1 yeti yeti 2657 Apr 13 15:00 pandaJob.out
[2023-04-13 15:20:46] -rw------- 1 yeti yeti 424 Apr 13 15:00 setup.sh.local
[2023-04-13 15:20:46] -rw------- 1 yeti yeti 1440294 Apr 13 15:01 cric_ddmendpoints.json
[2023-04-13 15:20:46] -rw------- 1 yeti yeti 1013206 Apr 13 15:01 agis_schedconf.cvmfs.json
[2023-04-13 15:20:46] drwx------ 4 yeti yeti 4096 Apr 13 15:02 pilot3
[2023-04-13 15:20:46] -rw-rw-r-- 1 yeti yeti 532 Apr 13 15:10 boinc_task_state.xml
[2023-04-13 15:20:46] -rw------- 1 yeti yeti 1827299 Apr 13 15:13 output.1.2bdc0808-d580-4eb3-b65b-d0905188a7f4_71002.pool.root
[2023-04-13 15:20:46] -rw------- 1 yeti yeti 1002 Apr 13 15:14 memory_monitor_summary.json
[2023-04-13 15:20:46] -rw------- 1 yeti yeti 442402 Apr 13 15:17 2bdc0808-d580-4eb3-b65b-d0905188a7f4_71002.1.job.log.tgz
[2023-04-13 15:20:46] -rw------- 1 yeti yeti 7743 Apr 13 15:20 heartbeat.json
[2023-04-13 15:20:46] -rw------- 1 yeti yeti 9475 Apr 13 15:20 pilotlog.txt
[2023-04-13 15:20:46] -rw-rw-r-- 1 yeti yeti 8192 Apr 13 15:20 boinc_mmap_file
[2023-04-13 15:20:46] -rw------- 1 yeti yeti 364067 Apr 13 15:20 2bdc0808-d580-4eb3-b65b-d0905188a7f4_71002.1.job.log
[2023-04-13 15:20:46] -rw-rw-r-- 1 yeti yeti 25 Apr 13 15:20 wrapper_checkpoint.txt
[2023-04-13 15:20:46] -rw------- 1 yeti yeti 464 Apr 13 15:20 output.list
[2023-04-13 15:20:46] -rw-rw-r-- 1 yeti yeti 748 Apr 13 15:20 runtime_log
[2023-04-13 15:20:46] -rw------- 1 yeti yeti 2652160 Apr 13 15:20 result.tar.gz
[2023-04-13 15:20:46] -rw-rw-r-- 1 yeti yeti 12223 Apr 13 15:20 runtime_log.err
[2023-04-13 15:20:46] -rw------- 1 yeti yeti 623 Apr 13 15:20 qrGODm4iB72n7Olcko1bjSoqABFKDmABFKDm7AsVDmTcHKDmYwByRo.diag
[2023-04-13 15:20:46] -rw-rw-r-- 1 yeti yeti 29118 Apr 13 15:20 stderr.txt
[2023-04-13 15:20:46] HITS file was successfully produced:
[2023-04-13 15:20:46] -rw------- 1 yeti yeti 1827299 Apr 13 15:13 shared/HITS.pool.root.1
[2023-04-13 15:20:46] *** Contents of shared directory: ***
[2023-04-13 15:20:46] insgesamt 41944
[2023-04-13 15:20:46] -rw-r--r-- 2 yeti yeti 17632 Apr 13 15:00 start_atlas.sh
[2023-04-13 15:20:46] -rw-r--r-- 2 yeti yeti 414770 Apr 13 15:00 input.tar.gz
[2023-04-13 15:20:46] -rw-r--r-- 2 yeti yeti 38019645 Apr 13 15:00 ATLAS.root_0
[2023-04-13 15:20:46] -rw------- 1 yeti yeti 1827299 Apr 13 15:13 HITS.pool.root.1
[2023-04-13 15:20:46] -rw------- 1 yeti yeti 2652160 Apr 13 15:20 result.tar.gz
15:20:47 (2073995): run_atlas exited; CPU time 427.508430
15:20:47 (2073995): called boinc_finish(0)
</stderr_txt>
]]>
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