Stderr output

<core_client_version>7.16.20</core_client_version>
<![CDATA[
<stderr_txt>
2023-03-28 23:22:42 (5568): Detected: vboxwrapper 26206
2023-03-28 23:22:42 (5568): Detected: BOINC client v7.16.20
2023-03-28 23:22:44 (5568): Detected: VirtualBox VboxManage Interface (Version: 6.0.14)
2023-03-28 23:22:44 (5568): Successfully copied 'init_data.xml' to the shared directory.
2023-03-28 23:22:45 (5568): Create VM. (boinc_5528bd8342c0cd55, slot#1)
2023-03-28 23:22:46 (5568): Setting Memory Size for VM. (4700MB)
2023-03-28 23:22:46 (5568): Setting CPU Count for VM. (7)
2023-03-28 23:22:46 (5568): Setting Chipset Options for VM.
2023-03-28 23:22:46 (5568): Setting Graphics Controller Options for VM.
2023-03-28 23:22:47 (5568): Setting Boot Options for VM.
2023-03-28 23:22:47 (5568): Setting Network Configuration for NAT.
2023-03-28 23:22:48 (5568): Enabling VM Network Access.
2023-03-28 23:22:48 (5568): Disabling USB Support for VM.
2023-03-28 23:22:48 (5568): Disabling COM Port Support for VM.
2023-03-28 23:22:49 (5568): Disabling LPT Port Support for VM.
2023-03-28 23:22:49 (5568): Disabling Audio Support for VM.
2023-03-28 23:22:49 (5568): Disabling Clipboard Support for VM.
2023-03-28 23:22:50 (5568): Disabling Drag and Drop Support for VM.
2023-03-28 23:22:50 (5568): Adding storage controller(s) to VM.
2023-03-28 23:22:50 (5568): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2023-03-28 23:22:51 (5568): Adding VirtualBox Guest Additions to VM.
2023-03-28 23:22:52 (5568): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2023-03-28 23:22:52 (5568): forwarding host port 62158 to guest port 80
2023-03-28 23:22:53 (5568): Enabling remote desktop for VM.
2023-03-28 23:22:53 (5568): Required extension pack not installed, remote desktop not enabled.
2023-03-28 23:22:53 (5568): Enabling shared directory for VM.
2023-03-28 23:22:54 (5568): Starting VM using VBoxManage interface. (boinc_5528bd8342c0cd55, slot#1)
2023-03-28 23:23:01 (5568): Successfully started VM. (PID = '1216')
2023-03-28 23:23:01 (5568): Reporting VM Process ID to BOINC.
2023-03-28 23:23:01 (5568): Guest Log: BIOS: VirtualBox 6.0.14
2023-03-28 23:23:01 (5568): Guest Log: CPUID EDX: 0x178bfbff
2023-03-28 23:23:01 (5568): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2023-03-28 23:23:01 (5568): VM state change detected. (old = 'poweredoff', new = 'running')
2023-03-28 23:23:01 (5568): Detected: Web Application Enabled (http://localhost:62158)
2023-03-28 23:23:01 (5568): Preference change detected
2023-03-28 23:23:01 (5568): Setting CPU throttle for VM. (80%)
2023-03-28 23:23:01 (5568): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 300 seconds) or (Vbox_job.xml: 900 seconds))
2023-03-28 23:23:03 (5568): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2023-03-28 23:23:03 (5568): Guest Log: BIOS: Booting from Hard Disk...
2023-03-28 23:23:13 (5568): Guest Log: BIOS: KBD: unsupported int 16h function 03
2023-03-28 23:23:13 (5568): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2023-03-28 23:23:13 (5568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2023-03-28 23:23:13 (5568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2023-03-28 23:23:13 (5568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2023-03-28 23:23:13 (5568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2023-03-28 23:23:13 (5568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2023-03-28 23:23:13 (5568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2023-03-28 23:23:13 (5568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2023-03-28 23:23:13 (5568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2023-03-28 23:23:13 (5568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2023-03-28 23:23:13 (5568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2023-03-28 23:23:13 (5568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2023-03-28 23:23:13 (5568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2023-03-28 23:23:13 (5568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2023-03-28 23:23:13 (5568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2023-03-28 23:23:13 (5568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2023-03-28 23:23:13 (5568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2023-03-28 23:23:13 (5568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2023-03-28 23:23:13 (5568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2023-03-28 23:23:13 (5568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2023-03-28 23:23:13 (5568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2023-03-28 23:23:13 (5568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2023-03-28 23:23:13 (5568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2023-03-28 23:23:13 (5568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2023-03-28 23:23:13 (5568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2023-03-28 23:23:13 (5568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2023-03-28 23:23:13 (5568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2023-03-28 23:23:13 (5568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2023-03-28 23:23:13 (5568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2023-03-28 23:23:13 (5568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2023-03-28 23:23:13 (5568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2023-03-28 23:23:31 (5568): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2023-03-28 23:23:31 (5568): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2023-03-28 23:24:08 (5568): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2023-03-28 23:24:08 (5568): Guest Log: 00:00:00.000246 main     Log opened 2023-03-28T23:24:05.960960000Z
2023-03-28 23:24:08 (5568): Guest Log: 00:00:00.000422 main     OS Product: Linux
2023-03-28 23:24:08 (5568): Guest Log: 00:00:00.000539 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2023-03-28 23:24:08 (5568): Guest Log: 00:00:00.000603 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2023-03-28 23:24:08 (5568): Guest Log: 00:00:00.000668 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2023-03-28 23:24:08 (5568): Guest Log: 00:00:00.000670 main     Process ID: 1339
2023-03-28 23:24:08 (5568): Guest Log: 00:00:00.000671 main     Package type: LINUX_64BITS_GENERIC
2023-03-28 23:24:08 (5568): Guest Log: 00:00:00.002019 main     5.2.32 r132073 started. Verbose level = 0
2023-03-28 23:24:08 (5568): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2023-03-28 23:24:08 (5568): Guest Log: [INFO] Mounting shared directory
2023-03-28 23:24:08 (5568): Guest Log: [INFO] Checking for init_data.xml
2023-03-28 23:24:18 (5568): Guest Log: 00:00:10.005359 timesync vgsvcTimeSyncWorker: Radical guest time change: 14 411 503 534 000ns (GuestNow=1 680 060 257 468 279 000 ns GuestLast=1 680 045 845 964 745 000 ns fSetTimeLastLoop=true )
2023-03-28 23:24:20 (5568): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2023-03-28 23:24:20 (5568): Guest Log: [INFO] Detected branch: dev
2023-03-28 23:24:21 (5568): Guest Log: This is the dev version of the ATLAS job wrapper
2023-03-28 23:24:21 (5568): Guest Log: Copying input files
2023-03-28 23:24:23 (5568): Guest Log: Copied input files into RunAtlas.
2023-03-28 23:24:23 (5568): Guest Log: This VM did not configure a local http proxy via BOINC.
2023-03-28 23:24:23 (5568): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2023-03-28 23:24:23 (5568): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2023-03-28 23:24:23 (5568): Guest Log: Further information can be found at the LHC@home message board.
2023-03-28 23:24:37 (5568): Guest Log: Running cvmfs_config stat atlas.cern.ch
2023-03-28 23:24:38 (5568): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2023-03-28 23:24:38 (5568): Guest Log: 2.6.3.0 1624 0 32216 117982 3 1 3116370 4096000 0 65024 0 0 n/a 1 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2023-03-28 23:24:44 (5568): Guest Log: copied the webapp to /var/www
2023-03-28 23:24:44 (5568): Guest Log: ATHENA_PROC_NUMBER=7
2023-03-28 23:24:44 (5568): Guest Log: ATHENA_CORE_NUMBER=7
2023-03-28 23:24:45 (5568): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2023-03-28 23:24:45 (5568): Guest Log:  *** Starting ATLAS job. (PandaID=5823118943 taskID=NULL&cor) ***
2023-04-17 19:49:38 (5568): Guest Log: 00:40:21.012080 timesync vgsvcTimeSyncWorker: Radical host time change: 1 712 719 547 000 000ns (HostNow=1 681 775 378 008 000 000 ns HostLast=1 680 062 658 461 000 000 ns)
2023-04-17 19:49:47 (5568): Preference change detected
2023-04-17 19:49:47 (5568): Setting CPU throttle for VM. (80%)
2023-04-17 19:49:48 (5568): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 300 seconds) or (Vbox_job.xml: 900 seconds))
2023-04-17 19:49:49 (5568): Guest Log: 00:40:31.013134 timesync vgsvcTimeSyncWorker: Radical guest time change: 1 712 719 535 537 000ns (GuestNow=1 681 775 388 009 648 000 ns GuestLast=1 680 062 668 474 111 000 ns fSetTimeLastLoop=true )
2023-04-17 19:51:07 (5568): Guest Log:  *** Job finished ***
2023-04-17 19:51:07 (5568): Guest Log:  *** The last 20 lines of the pilot log: ***
2023-04-17 19:51:07 (5568): Guest Log:  *** Error codes and diagnostics ***
2023-04-17 19:51:07 (5568): Guest Log:  *** Listing of results directory ***
2023-04-17 19:51:07 (5568): Guest Log: total 7016
2023-04-17 19:51:07 (5568): Guest Log: -rwxr-xr-x. 1 atlas atlas    8618 Mar 29 03:24 init_data.xml
2023-04-17 19:51:07 (5568): Guest Log: -rwxr-xr-x. 1 atlas atlas  403670 Mar 29 03:24 input.tar.gz
2023-04-17 19:51:07 (5568): Guest Log: -rwxr-xr-x. 1 atlas atlas   17604 Mar 29 03:24 start_atlas.sh
2023-04-17 19:51:07 (5568): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Mar 29 03:24 EVNT.04972714._000026.pool.root.1 -> /data/./ATLAS.root_0
2023-04-17 19:51:07 (5568): Guest Log: -rw-r--r--. 1 atlas atlas    2758 Mar 29 03:24 pandaJob.out
2023-04-17 19:51:07 (5568): Guest Log: -rw-------. 1 atlas atlas     424 Mar 29 03:24 setup.sh.local
2023-04-17 19:51:07 (5568): Guest Log: -rw-------. 1 atlas atlas 1436706 Mar 29 03:27 cric_ddmendpoints.json
2023-04-17 19:51:07 (5568): Guest Log: -rw-------. 1 atlas atlas 1014216 Mar 29 03:27 agis_schedconf.cvmfs.json
2023-04-17 19:51:07 (5568): Guest Log: drwx------. 4 atlas atlas     284 Mar 29 03:28 pilot3
2023-04-17 19:51:07 (5568): Guest Log: -rw-------. 1 atlas atlas     822 Mar 29 03:58 heartbeat.json
2023-04-17 19:51:07 (5568): Guest Log: -rw-------. 1 atlas atlas 1520105 Mar 29 03:59 output.1.c26f2193-3ed4-4c4b-b985-e3f7b4f753bb_42169.pool.root
2023-04-17 19:51:07 (5568): Guest Log: -rw-------. 1 atlas atlas    1022 Mar 29 03:59 memory_monitor_summary.json
2023-04-17 19:51:07 (5568): Guest Log: -rw-------. 1 atlas atlas  163250 Mar 29 04:02 c26f2193-3ed4-4c4b-b985-e3f7b4f753bb_42169.1.job.log.tgz
2023-04-17 19:51:07 (5568): Guest Log: -rw-r--r--. 1 atlas atlas  393247 Apr 17 19:32 pilot3.tar.gz
2023-04-17 19:51:07 (5568): Guest Log: -rwx------. 1 atlas atlas   27542 Apr 17 20:26 runpilot2-wrapper.sh
2023-04-17 19:51:07 (5568): Guest Log: -rw-r--r--. 1 atlas atlas    4388 Apr 17 20:26 queuedata.json
2023-04-17 19:51:07 (5568): Guest Log: drwxrwx---. 2 atlas atlas    4096 Apr 17 23:51 PanDA_Pilot-5823118943
2023-04-17 19:51:07 (5568): Guest Log: -rw-------. 1 atlas atlas  131450 Apr 17 23:51 pilotlog.txt
2023-04-17 19:51:07 (5568): Guest Log: -rw-------. 1 atlas atlas  143647 Apr 17 23:51 c26f2193-3ed4-4c4b-b985-e3f7b4f753bb_42169.1.job.log
2023-04-17 19:51:07 (5568): Guest Log: -rw-------. 1 atlas atlas     464 Apr 17 23:51 output.list
2023-04-17 19:51:07 (5568): Guest Log: -rw-r--r--. 1 atlas atlas     748 Apr 17 23:51 runtime_log
2023-04-17 19:51:07 (5568): Guest Log: -rw-------. 1 atlas atlas 1843200 Apr 17 23:51 result.tar.gz
2023-04-17 19:51:07 (5568): Guest Log: -rw-r--r--. 1 atlas atlas   12279 Apr 17 23:51 runtime_log.err
2023-04-17 19:51:08 (5568): Guest Log: -rw-------. 1 atlas atlas     638 Apr 17 23:51 NAoLDmqbk82n7Olcko1bjSoqABFKDmABFKDm7AsVDmfxHKDmuFwqem.diag
2023-04-17 19:51:08 (5568): Guest Log: Looking for outputfile output.1.c26f2193-3ed4-4c4b-b985-e3f7b4f753bb_42169.pool.root
2023-04-17 19:51:08 (5568): Guest Log: HITS file was successfully produced
2023-04-17 19:51:08 (5568): Guest Log: -rw-------. 1 atlas atlas 1520105 Mar 29 03:59 /home/atlas/RunAtlas/output.1.c26f2193-3ed4-4c4b-b985-e3f7b4f753bb_42169.pool.root
2023-04-17 19:51:08 (5568): Guest Log: Successfully finished the ATLAS job!
2023-04-17 19:51:08 (5568): Guest Log: Copying the results back to the shared directory!
2023-04-17 19:51:08 (5568): Guest Log:  *** Contents of shared directory: ***
2023-04-17 19:51:08 (5568): Guest Log: total 41556
2023-04-17 19:51:08 (5568): Guest Log: -rwxrwxrwx. 1 root root 37224345 Mar 29 03:22 ATLAS.root_0
2023-04-17 19:51:08 (5568): Guest Log: -rwxrwxrwx. 1 root root  1520105 Apr 17 23:51 HITS.pool.root.1
2023-04-17 19:51:08 (5568): Guest Log: -rwxrwxrwx. 1 root root     8618 Mar 29 03:22 init_data.xml
2023-04-17 19:51:08 (5568): Guest Log: -rwxrwxrwx. 1 root root   403670 Mar 29 00:55 input.tar.gz
2023-04-17 19:51:08 (5568): Guest Log: -rwxrwxrwx. 1 root root  1520105 Apr 17 23:51 output.1.c26f2193-3ed4-4c4b-b985-e3f7b4f753bb_42169.pool.root
2023-04-17 19:51:08 (5568): Guest Log: -rwxrwxrwx. 1 root root  1843200 Apr 17 23:51 result.tar.gz
2023-04-17 19:51:08 (5568): Guest Log: -rwxrwxrwx. 1 root root    17604 Mar 29 00:55 start_atlas.sh
2023-04-17 19:51:08 (5568): Guest Log:  *** Success! Shutting down the machine. ***
2023-04-17 19:51:08 (5568): VM Completion File Detected.
2023-04-17 19:51:08 (5568): Powering off VM.
2023-04-17 19:51:09 (5568): Successfully stopped VM.
2023-04-17 19:51:09 (5568): Deregistering VM. (boinc_5528bd8342c0cd55, slot#1)
2023-04-17 19:51:09 (5568): Removing network bandwidth throttle group from VM.
2023-04-17 19:51:10 (5568): Removing VM from VirtualBox.
19:51:15 (5568): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN