Name | RmJODmYsFD3n7Olcko1bjSoqABFKDmABFKDm7AsVDmEWIKDmf7qFQn_0 |
Workunit | 2303685 |
Created | 30 Apr 2023, 6:38:25 UTC |
Sent | 30 Apr 2023, 6:41:40 UTC |
Report deadline | 7 May 2023, 6:41:40 UTC |
Received | 30 Apr 2023, 8:48:05 UTC |
Server state | Over |
Outcome | Success |
Client state | Done |
Exit status | 0 (0x00000000) |
Computer ID | 4433 |
Run time | 47 min 17 sec |
CPU time | 11 min 38 sec |
Validate state | Valid |
Credit | 27.24 |
Device peak FLOPS | 5.37 GFLOPS |
Application version | ATLAS Simulation v3.01 (native_mt) x86_64-pc-linux-gnu |
Peak working set size | 1.49 GB |
Peak swap size | 10.88 GB |
Peak disk usage | 81.05 MB |
<core_client_version>7.9.3</core_client_version> <![CDATA[ <stderr_txt> 03:00:06 (28756): wrapper (7.7.26015): starting 03:00:06 (28756): wrapper: running run_atlas (--nthreads 1) [2023-04-30 03:00:06] Arguments: --nthreads 1 [2023-04-30 03:00:06] Threads: 1 [2023-04-30 03:00:06] Checking for CVMFS [2023-04-30 03:00:08] Probing /cvmfs/atlas.cern.ch... OK [2023-04-30 03:00:10] Probing /cvmfs/atlas-condb.cern.ch... OK [2023-04-30 03:00:10] Running cvmfs_config stat atlas.cern.ch [2023-04-30 03:00:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE [2023-04-30 03:00:11] 2.9.2.0 28967 0 24776 118450 3 1 3516459 4194305 0 130560 0 0 100.000 0 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1 [2023-04-30 03:00:11] CVMFS is ok [2023-04-30 03:00:11] Efficiency of ATLAS tasks can be improved by the following measure(s): [2023-04-30 03:00:11] Small home clusters do not require a local http proxy but it is suggested if [2023-04-30 03:00:11] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks. [2023-04-30 03:00:11] Further information can be found at the LHC@home message board. [2023-04-30 03:00:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 [2023-04-30 03:00:11] Checking for apptainer binary... [2023-04-30 03:00:12] apptainer is not installed, using version from CVMFS [2023-04-30 03:00:12] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname [2023-04-30 03:00:16] 2700x [2023-04-30 03:00:16] apptainer works [2023-04-30 03:00:16] Starting ATLAS job with PandaID=5835780499 [2023-04-30 03:00:16] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/15 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh [2023-04-30 03:47:20] *** The last 200 lines of the pilot log: *** [2023-04-30 03:47:20] 2023-04-30 07:46:57,618 | DEBUG | pilot.user.atlas.utilities | get_cpu_arch | CPU arch script returned: x86-64-v3 [2023-04-30 03:47:20] 2023-04-30 07:46:57,619 | DEBUG | pilot.control.job | get_data_structure | cpu arch=x86-64-v3 [2023-04-30 03:47:20] 2023-04-30 07:46:57,620 | INFO | pilot.user.atlas.utilities | get_memory_values | using path: /var/lib/boinc-client/slots/15/PanDA_Pilot-5835780499/memory_monitor_summary.json (trf n [2023-04-30 03:47:20] 2023-04-30 07:46:57,631 | DEBUG | pilot.user.atlas.utilities | get_memory_monitor_info | summary_dictionary={'Avg': {'nprocs': 5.0, 'nthreads': 5.692, 'pss': 958176.0, 'rchar': 37170362.0, [2023-04-30 03:47:20] 2023-04-30 07:46:57,636 | INFO | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard info from prmon json [2023-04-30 03:47:20] 2023-04-30 07:46:57,637 | INFO | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard memory fields from prmon json [2023-04-30 03:47:20] 2023-04-30 07:46:57,638 | INFO | pilot.util.timing | timing_report | .............................. [2023-04-30 03:47:20] 2023-04-30 07:46:57,638 | INFO | pilot.util.timing | timing_report | . Timing measurements: [2023-04-30 03:47:20] 2023-04-30 07:46:57,639 | INFO | pilot.util.timing | timing_report | . get job = 70 s [2023-04-30 03:47:20] 2023-04-30 07:46:57,643 | INFO | pilot.util.timing | timing_report | . initial setup = 51 s [2023-04-30 03:47:20] 2023-04-30 07:46:57,644 | INFO | pilot.util.timing | timing_report | . payload setup = 190 s [2023-04-30 03:47:20] 2023-04-30 07:46:57,644 | INFO | pilot.util.timing | timing_report | . stage-in = 64 s [2023-04-30 03:47:20] 2023-04-30 07:46:57,645 | INFO | pilot.util.timing | timing_report | . payload execution = 1630 s [2023-04-30 03:47:20] 2023-04-30 07:46:57,645 | INFO | pilot.util.timing | timing_report | . stage-out = 347 s [2023-04-30 03:47:20] 2023-04-30 07:46:57,646 | INFO | pilot.util.timing | timing_report | .............................. [2023-04-30 03:47:20] 2023-04-30 07:46:57,651 | DEBUG | pilot.control.job | send_state | data={'jobId': '5835780499', 'state': 'finished', 'timestamp': '2023-04-30T03:45:18-05:00', 'siteNam [2023-04-30 03:47:20] 2023-04-30 07:46:57,653 | DEBUG | pilot.control.job | write_heartbeat_to_file | heartbeat dictionary: {'jobId': '5835780499', 'state': 'finished', 'timestamp': '2023-04-30T03:45:18 [2023-04-30 03:47:20] 2023-04-30 07:46:57,653 | DEBUG | pilot.control.job | write_heartbeat_to_file | wrote heartbeat to file: /var/lib/boinc-client/slots/15/heartbeat.json [2023-04-30 03:47:20] 2023-04-30 07:46:58,211 | INFO | pilot.control.job | make_job_report | [2023-04-30 03:47:20] 2023-04-30 07:46:58,212 | INFO | pilot.control.job | make_job_report | job summary report [2023-04-30 03:47:20] 2023-04-30 07:46:58,212 | INFO | pilot.control.job | make_job_report | -------------------------------------------------- [2023-04-30 03:47:20] 2023-04-30 07:46:58,213 | INFO | pilot.control.job | make_job_report | PanDA job id: 5835780499 [2023-04-30 03:47:20] 2023-04-30 07:46:58,213 | INFO | pilot.control.job | make_job_report | task id: NULL [2023-04-30 03:47:20] 2023-04-30 07:46:58,213 | INFO | pilot.control.job | make_job_report | errors: (none) [2023-04-30 03:47:20] 2023-04-30 07:46:58,213 | INFO | pilot.control.job | make_job_report | status: LOG_TRANSFER = DONE [2023-04-30 03:47:20] 2023-04-30 07:46:58,213 | INFO | pilot.control.job | make_job_report | pilot state: finished [2023-04-30 03:47:20] 2023-04-30 07:46:58,214 | INFO | pilot.control.job | make_job_report | transexitcode: 0 [2023-04-30 03:47:20] 2023-04-30 07:46:58,214 | INFO | pilot.control.job | make_job_report | exeerrorcode: 0 [2023-04-30 03:47:20] 2023-04-30 07:46:58,214 | INFO | pilot.control.job | make_job_report | exeerrordiag: [2023-04-30 03:47:20] 2023-04-30 07:46:58,219 | INFO | pilot.control.job | make_job_report | exitcode: 0 [2023-04-30 03:47:20] 2023-04-30 07:46:58,220 | INFO | pilot.control.job | make_job_report | exitmsg: OK [2023-04-30 03:47:20] 2023-04-30 07:46:58,221 | INFO | pilot.control.job | make_job_report | cpuconsumptiontime: 686 s [2023-04-30 03:47:20] 2023-04-30 07:46:58,221 | INFO | pilot.control.job | make_job_report | nevents: 2 [2023-04-30 03:47:20] 2023-04-30 07:46:58,221 | INFO | pilot.control.job | make_job_report | neventsw: 0 [2023-04-30 03:47:20] 2023-04-30 07:46:58,222 | INFO | pilot.control.job | make_job_report | pid: 7864 [2023-04-30 03:47:20] 2023-04-30 07:46:58,222 | INFO | pilot.control.job | make_job_report | pgrp: 7864 [2023-04-30 03:47:20] 2023-04-30 07:46:58,222 | INFO | pilot.control.job | make_job_report | corecount: 1 [2023-04-30 03:47:20] 2023-04-30 07:46:58,223 | INFO | pilot.control.job | make_job_report | event service: False [2023-04-30 03:47:20] 2023-04-30 07:46:58,228 | INFO | pilot.control.job | make_job_report | sizes: {0: 2577341, 1: 2578714, 2: 2578913, 13: 2578913, 24: 2578969, 34: 2578997, 45: 2579153, 56: [2023-04-30 03:47:20] 2023-04-30 07:46:58,229 | INFO | pilot.control.job | make_job_report | -------------------------------------------------- [2023-04-30 03:47:20] 2023-04-30 07:46:58,229 | INFO | pilot.control.job | make_job_report | [2023-04-30 03:47:20] 2023-04-30 07:46:58,230 | DEBUG | pilot.control.job | has_job_completed | ls -lF /var/lib/boinc-client/slots/15: [2023-04-30 03:47:20] [2023-04-30 03:47:20] 2023-04-30 07:46:58,230 | INFO | pilot.util.container | print_executable | executing command: ls -lF /var/lib/boinc-client/slots/15 [2023-04-30 03:47:20] 2023-04-30 07:46:58,743 | DEBUG | pilot.control.job | has_job_completed | total 42296 [2023-04-30 03:47:20] -rw------- 1 boinc boinc 339715 Apr 30 03:46 7ff9f83c-6414-4497-9061-5b8685afef23_78713.1.job.log [2023-04-30 03:47:20] -rw------- 1 boinc boinc 177808 Apr 30 03:42 7ff9f83c-6414-4497-9061-5b8685afef23_78713.1.job.log.tgz [2023-04-30 03:47:20] -rw------- 1 boinc boinc 1013360 Apr 30 03:02 agis_schedconf.cvmfs.json [2023-04-30 03:47:20] -rw-r--r-- 1 boinc boinc 0 Apr 30 03:00 boinc_lockfile [2023-04-30 03:47:20] -rw-r--r-- 1 boinc boinc 8192 Apr 30 03:46 boinc_mmap_file [2023-04-30 03:47:20] -rw-r--r-- 1 boinc boinc 534 Apr 30 03:39 boinc_task_state.xml [2023-04-30 03:47:20] -rw------- 1 boinc boinc 1446236 Apr 30 03:03 cric_ddmendpoints.json [2023-04-30 03:47:20] -rw-r--r-- 2 boinc boinc 37727106 Apr 30 03:00 EVNT.04972714._000037.pool.root.1 [2023-04-30 03:47:20] -rw------- 1 boinc boinc 6601 Apr 30 03:46 heartbeat.json [2023-04-30 03:47:20] -rw-r--r-- 1 boinc boinc 9174 Apr 30 03:00 init_data.xml [2023-04-30 03:47:20] -rw-r--r-- 2 boinc boinc 425366 Apr 30 03:00 input.tar.gz [2023-04-30 03:47:20] -rw-r--r-- 1 boinc boinc 112 Apr 30 03:00 job.xml [2023-04-30 03:47:20] -rw------- 1 boinc boinc 1016 Apr 30 03:39 memory_monitor_summary.json [2023-04-30 03:47:20] -rw------- 1 boinc boinc 1257583 Apr 30 03:39 output.1.7ff9f83c-6414-4497-9061-5b8685afef23_78713.pool.root [2023-04-30 03:47:20] -rw------- 1 boinc boinc 464 Apr 30 03:45 output.list [2023-04-30 03:47:20] -rw-r--r-- 1 boinc boinc 2662 Apr 30 03:00 pandaJob.out [2023-04-30 03:47:20] drwxrwx--- 2 boinc boinc 4096 Apr 30 03:45 PanDA_Pilot-5835780499/ [2023-04-30 03:47:20] drwx------ 4 boinc boinc 4096 Apr 30 03:04 pilot3/ [2023-04-30 03:47:20] -rw------- 1 boinc boinc 413524 Apr 30 02:38 pilot3.tar.gz [2023-04-30 03:47:20] -rw------- 1 boinc boinc 327551 Apr 30 03:46 pilotlog.txt [2023-04-30 03:47:20] -rw-r--r-- 1 boinc boinc 4388 Apr 30 02:38 queuedata.json [2023-04-30 03:47:20] -rw------- 1 boinc boinc 128 Apr 30 03:00 RmJODmYsFD3n7Olcko1bjSoqABFKDmABFKDm7AsVDmEWIKDmf7qFQn.diag [2023-04-30 03:47:20] -rwxr-xr-x 1 boinc boinc 7986 Apr 30 03:00 run_atlas* [2023-04-30 03:47:20] -rwx------ 1 boinc boinc 27540 Apr 30 02:38 runpilot2-wrapper.sh* [2023-04-30 03:47:20] -rw-r--r-- 1 boinc boinc 407 Apr 30 03:00 runtime_log [2023-04-30 03:47:20] -rw-r--r-- 1 boinc boinc 7841 Apr 30 03:00 runtime_log.err [2023-04-30 03:47:20] -rw------- 1 boinc boinc 424 Apr 30 03:00 setup.sh.local [2023-04-30 03:47:20] drwxrwx--x 2 boinc boinc 4096 Apr 30 03:00 shared/ [2023-04-30 03:47:20] -rw-r--r-- 2 boinc boinc 17632 Apr 30 03:00 start_atlas.sh [2023-04-30 03:47:20] -rw-r--r-- 1 boinc boinc 2024 Apr 30 03:00 stderr.txt [2023-04-30 03:47:20] -rw-r--r-- 1 boinc boinc 107 Apr 30 03:00 wrapper_26015_x86_64-pc-linux-gnu [2023-04-30 03:47:20] -rw-r--r-- 1 boinc boinc 25 Apr 30 03:46 wrapper_checkpoint.txt [2023-04-30 03:47:20] 2023-04-30 07:46:58,744 | INFO | pilot.util.queuehandling | queue_report | queue jobs had 0 job(s) [purged] [2023-04-30 03:47:20] 2023-04-30 07:46:58,744 | INFO | pilot.util.queuehandling | queue_report | queue payloads had 0 job(s) [purged] [2023-04-30 03:47:20] 2023-04-30 07:46:58,744 | INFO | pilot.util.queuehandling | queue_report | queue data_in had 0 job(s) [purged] [2023-04-30 03:47:20] 2023-04-30 07:46:58,744 | INFO | pilot.util.queuehandling | queue_report | queue data_out had 0 job(s) [purged] [2023-04-30 03:47:20] 2023-04-30 07:46:58,744 | INFO | pilot.util.queuehandling | queue_report | queue current_data_in had 0 job(s) [purged] [2023-04-30 03:47:20] 2023-04-30 07:46:58,745 | INFO | pilot.util.queuehandling | queue_report | queue validated_jobs had 0 job(s) [purged] [2023-04-30 03:47:20] 2023-04-30 07:46:58,745 | INFO | pilot.util.queuehandling | queue_report | queue validated_payloads had 0 job(s) [purged] [2023-04-30 03:47:20] 2023-04-30 07:46:58,745 | INFO | pilot.util.queuehandling | queue_report | queue monitored_payloads had 0 job(s) [purged] [2023-04-30 03:47:20] 2023-04-30 07:46:58,745 | INFO | pilot.util.queuehandling | queue_report | queue finished_jobs had 0 job(s) [purged] [2023-04-30 03:47:20] 2023-04-30 07:46:58,745 | INFO | pilot.util.queuehandling | queue_report | queue finished_payloads had 0 job(s) [purged] [2023-04-30 03:47:20] 2023-04-30 07:46:58,745 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_in had 1 job(s) [purged] [2023-04-30 03:47:20] 2023-04-30 07:46:58,745 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_out had 0 job(s) [purged] [2023-04-30 03:47:20] 2023-04-30 07:46:58,745 | INFO | pilot.util.queuehandling | queue_report | queue failed_jobs had 0 job(s) [purged] [2023-04-30 03:47:20] 2023-04-30 07:46:58,745 | INFO | pilot.util.queuehandling | queue_report | queue failed_payloads had 0 job(s) [purged] [2023-04-30 03:47:20] 2023-04-30 07:46:58,746 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_in had 0 job(s) [purged] [2023-04-30 03:47:20] 2023-04-30 07:46:58,746 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_out had 0 job(s) [purged] [2023-04-30 03:47:20] 2023-04-30 07:46:58,746 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobs had 0 job(s) [purged] [2023-04-30 03:47:20] 2023-04-30 07:46:58,746 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobids has 1 job(s) [2023-04-30 03:47:20] 2023-04-30 07:46:58,746 | INFO | pilot.util.queuehandling | queue_report | queue realtimelog_payloads had 0 job(s) [purged] [2023-04-30 03:47:20] 2023-04-30 07:46:58,746 | INFO | pilot.util.queuehandling | queue_report | queue messages had 0 job(s) [purged] [2023-04-30 03:47:20] 2023-04-30 07:46:58,746 | INFO | pilot.control.job | has_job_completed | job 5835780499 has completed (purged errors) [2023-04-30 03:47:20] 2023-04-30 07:46:58,746 | DEBUG | pilot.util.realtimelogger | cleanup | attempting real-time logger cleanup [2023-04-30 03:47:20] 2023-04-30 07:46:58,747 | INFO | pilot.util.processes | cleanup | overall cleanup function is called [2023-04-30 03:47:20] 2023-04-30 07:46:58,772 | DEBUG | pilot.util.processes | cleanup | work directory was removed: /var/lib/boinc-client/slots/15/PanDA_Pilot-5835780499 [2023-04-30 03:47:20] 2023-04-30 07:46:59,775 | INFO | pilot.info.jobdata | collect_zombies | --- collectZombieJob: --- 10, [7864] [2023-04-30 03:47:20] 2023-04-30 07:46:59,776 | INFO | pilot.info.jobdata | collect_zombies | zombie collector trying to kill pid 7864 [2023-04-30 03:47:20] 2023-04-30 07:46:59,776 | INFO | pilot.info.jobdata | collect_zombies | harmless exception when collecting zombies: [Errno 10] No child processes [2023-04-30 03:47:20] 2023-04-30 07:47:00,779 | INFO | pilot.util.processes | cleanup | collected zombie processes [2023-04-30 03:47:20] 2023-04-30 07:47:00,780 | INFO | pilot.util.processes | cleanup | will now attempt to kill all subprocesses of pid=7864 [2023-04-30 03:47:20] 2023-04-30 07:47:01,700 | INFO | pilot.util.processes | kill_processes | process IDs to be killed: [7864] (in reverse order) [2023-04-30 03:47:20] 2023-04-30 07:47:02,626 | WARNING | pilot.util.processes | kill_processes | found no corresponding commands to process id(s) [2023-04-30 03:47:20] 2023-04-30 07:47:02,627 | INFO | pilot.util.processes | kill_orphans | Do not look for orphan processes in BOINC jobs [2023-04-30 03:47:20] 2023-04-30 07:47:02,627 | DEBUG | pilot.util.queuehandling | purge_queue | queue purged [2023-04-30 03:47:20] 2023-04-30 07:47:02,627 | INFO | pilot.control.job | retrieve | ready for new job [2023-04-30 03:47:20] 2023-04-30 07:47:02,627 | INFO | root | retrieve | pilot has finished with previous job - re-establishing logging [2023-04-30 03:47:20] 2023-04-30 07:47:02,629 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************** [2023-04-30 03:47:20] 2023-04-30 07:47:02,630 | INFO | pilot.util.auxiliary | pilot_version_banner | *** PanDA Pilot version 3.6.0 (68) *** [2023-04-30 03:47:20] 2023-04-30 07:47:02,630 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************** [2023-04-30 03:47:20] 2023-04-30 07:47:02,630 | INFO | pilot.util.auxiliary | pilot_version_banner | [2023-04-30 03:47:20] 2023-04-30 07:47:02,648 | INFO | pilot.util.auxiliary | display_architecture_info | architecture information: [2023-04-30 03:47:20] 2023-04-30 07:47:02,660 | INFO | pilot.util.container | print_executable | executing command: cat /etc/os-release [2023-04-30 03:47:20] 2023-04-30 07:47:02,892 | INFO | pilot.util.filehandling | dump | cat /etc/os-release: [2023-04-30 03:47:20] NAME="CentOS Linux" [2023-04-30 03:47:20] VERSION="7 (Core)" [2023-04-30 03:47:20] ID="centos" [2023-04-30 03:47:20] ID_LIKE="rhel fedora" [2023-04-30 03:47:20] VERSION_ID="7" [2023-04-30 03:47:20] PRETTY_NAME="CentOS Linux 7 (Core)" [2023-04-30 03:47:20] ANSI_COLOR="0;31" [2023-04-30 03:47:20] CPE_NAME="cpe:/o:centos:centos:7" [2023-04-30 03:47:20] HOME_URL="https://www.centos.org/" [2023-04-30 03:47:20] BUG_REPORT_URL="https://bugs.centos.org/" [2023-04-30 03:47:20] [2023-04-30 03:47:20] CENTOS_MANTISBT_PROJECT="CentOS-7" [2023-04-30 03:47:20] CENTOS_MANTISBT_PROJECT_VERSION="7" [2023-04-30 03:47:20] REDHAT_SUPPORT_PRODUCT="centos" [2023-04-30 03:47:20] REDHAT_SUPPORT_PRODUCT_VERSION="7" [2023-04-30 03:47:20] [2023-04-30 03:47:20] 2023-04-30 07:47:02,893 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************** [2023-04-30 03:47:20] 2023-04-30 07:47:03,395 | DEBUG | pilot.util.monitoring | check_local_space | checking local space on /var/lib/boinc-client/slots/15 [2023-04-30 03:47:20] 2023-04-30 07:47:03,396 | INFO | pilot.util.container | print_executable | executing command: df -mP /var/lib/boinc-client/slots/15 [2023-04-30 03:47:20] 2023-04-30 07:47:03,664 | DEBUG | pilot.util.workernode | get_local_disk_space | stdout=Filesystem 1048576-blocks Used Available Capacity Mounted on [2023-04-30 03:47:20] /dev/nvme0n1p2 479119 165503 289207 37% /var/lib/boinc-client/slots/15 [2023-04-30 03:47:20] 2023-04-30 07:47:03,665 | DEBUG | pilot.util.workernode | get_local_disk_space | stderr= [2023-04-30 03:47:20] 2023-04-30 07:47:03,665 | INFO | pilot.util.monitoring | check_local_space | sufficient remaining disk space (303255519232 B) [2023-04-30 03:47:20] 2023-04-30 07:47:03,665 | WARNING | pilot.control.job | proceed_with_getjob | since timefloor is set to 0, pilot was only allowed to run one job [2023-04-30 03:47:20] 2023-04-30 07:47:03,666 | DEBUG | pilot.control.job | retrieve | will not set job_aborted yet [2023-04-30 03:47:20] 2023-04-30 07:47:03,666 | INFO | pilot.control.job | retrieve | [job] retrieve thread has finished [2023-04-30 03:47:20] 2023-04-30 07:47:03,671 | WARNING | pilot.control.monitor | control | aborting monitor loop since graceful_stop has been set [2023-04-30 03:47:20] 2023-04-30 07:47:03,672 | INFO | pilot.control.monitor | control | [monitor] control thread has ended [2023-04-30 03:47:20] 2023-04-30 07:47:03,675 | WARNING | pilot.util.common | should_abort | job:queue_monitor:received graceful stop - abort after this iteration [2023-04-30 03:47:20] 2023-04-30 07:47:03,675 | DEBUG | pilot.control.job | queue_monitor | will not set job_aborted yet [2023-04-30 03:47:20] 2023-04-30 07:47:03,676 | INFO | pilot.control.job | queue_monitor | [job] queue monitor thread has finished [2023-04-30 03:47:20] 2023-04-30 07:47:03,863 | DEBUG | pilot.control.payload | execute_payloads | will not set job_aborted yet [2023-04-30 03:47:20] 2023-04-30 07:47:03,864 | INFO | pilot.control.payload | execute_payloads | [payload] execute_payloads thread has finished [2023-04-30 03:47:20] 2023-04-30 07:47:03,952 | DEBUG | pilot.control.job | create_data_payload | will not set job_aborted yet [2023-04-30 03:47:20] 2023-04-30 07:47:03,952 | INFO | pilot.control.job | create_data_payload | [job] create_data_payload thread has finished [2023-04-30 03:47:20] 2023-04-30 07:47:03,995 | DEBUG | pilot.control.data | copytool_in | will not set job_aborted yet [2023-04-30 03:47:20] 2023-04-30 07:47:03,996 | INFO | pilot.control.data | copytool_in | [data] copytool_in thread has finished [2023-04-30 03:47:20] 2023-04-30 07:47:04,102 | DEBUG | pilot.control.data | control | data control ending since graceful_stop has been set [2023-04-30 03:47:20] 2023-04-30 07:47:04,103 | DEBUG | pilot.control.data | control | will not set job_aborted yet [2023-04-30 03:47:20] 2023-04-30 07:47:04,103 | INFO | pilot.control.data | control | [data] control thread has finished [2023-04-30 03:47:20] 2023-04-30 07:47:04,134 | DEBUG | pilot.control.job | control | job control ending since graceful_stop has been set [2023-04-30 03:47:20] 2023-04-30 07:47:04,134 | DEBUG | pilot.control.job | control | will not set job_aborted yet [2023-04-30 03:47:20] 2023-04-30 07:47:04,134 | INFO | pilot.control.job | control | [job] control thread has finished [2023-04-30 03:47:20] 2023-04-30 07:47:04,334 | DEBUG | pilot.control.payload | validate_pre | will not set job_aborted yet [2023-04-30 03:47:20] 2023-04-30 07:47:04,334 | INFO | pilot.control.payload | validate_pre | [payload] validate_pre thread has finished [2023-04-30 03:47:20] 2023-04-30 07:47:04,411 | WARNING | pilot.util.common | should_abort | data:queue_monitoring:received graceful stop - abort after this iteration [2023-04-30 03:47:20] 2023-04-30 07:47:04,523 | DEBUG | pilot.control.payload | control | payload control ending since graceful_stop has been set [2023-04-30 03:47:20] 2023-04-30 07:47:04,524 | DEBUG | pilot.control.payload | control | will not set job_aborted yet [2023-04-30 03:47:20] 2023-04-30 07:47:04,524 | INFO | pilot.control.payload | control | [payload] control thread has finished [2023-04-30 03:47:20] 2023-04-30 07:47:04,707 | DEBUG | pilot.control.payload | validate_post | will not set job_aborted yet [2023-04-30 03:47:20] 2023-04-30 07:47:04,708 | INFO | pilot.control.payload | validate_post | [payload] validate_post thread has finished [2023-04-30 03:47:20] 2023-04-30 07:47:04,747 | DEBUG | pilot.control.payload | failed_post | will not set job_aborted yet [2023-04-30 03:47:20] 2023-04-30 07:47:04,748 | INFO | pilot.control.payload | failed_post | [payload] failed_post thread has finished [2023-04-30 03:47:20] 2023-04-30 07:47:04,854 | DEBUG | pilot.control.job | validate | will not set job_aborted yet [2023-04-30 03:47:20] 2023-04-30 07:47:04,854 | INFO | pilot.control.job | validate | [job] validate thread has finished [2023-04-30 03:47:20] 2023-04-30 07:47:04,859 | WARNING | pilot.util.common | should_abort | data:copytool_out:received graceful stop - abort after this iteration [2023-04-30 03:47:20] 2023-04-30 07:47:05,863 | DEBUG | pilot.control.data | copytool_out | will not set job_aborted yet [2023-04-30 03:47:20] 2023-04-30 07:47:05,864 | INFO | pilot.control.data | copytool_out | [data] copytool_out thread has finished [2023-04-30 03:47:20] 2023-04-30 07:47:07,426 | DEBUG | pilot.control.data | queue_monitoring | will not set job_aborted yet [2023-04-30 03:47:20] 2023-04-30 07:47:07,427 | INFO | pilot.control.data | queue_monitoring | [data] queue_monitor thread has finished [2023-04-30 03:47:20] 2023-04-30 07:47:14,391 | INFO | pilot.control.payload | get_logging_info | job.realtimelogging is not enabled [2023-04-30 03:47:20] 2023-04-30 07:47:14,392 | DEBUG | pilot.control.payload | run_realtimelog | real-time logging not needed at this point [2023-04-30 03:47:20] 2023-04-30 07:47:14,392 | DEBUG | pilot.control.payload | run_realtimelog | realtime logger was not found, waiting .. [2023-04-30 03:47:20] 2023-04-30 07:47:14,392 | DEBUG | pilot.control.payload | run_realtimelog | will not set job_aborted yet [2023-04-30 03:47:20] 2023-04-30 07:47:14,392 | INFO | pilot.control.payload | run_realtimelog | [payload] run_realtimelog thread has finished [2023-04-30 03:47:20] 2023-04-30 07:47:14,931 | DEBUG | pilot.util.processes | threads_aborted | aborting since only the main Pilot thread is still running (total thread count=1 with 0 daemon threa [2023-04-30 03:47:20] 2023-04-30 07:47:14,932 | DEBUG | pilot.workflow.generic | run | all relevant threads have aborted (thread count=1) [2023-04-30 03:47:20] 2023-04-30 07:47:14,932 | INFO | pilot.workflow.generic | run | end of generic workflow (traces error code: 0) [2023-04-30 03:47:20] 2023-04-30 07:47:14,933 | INFO | root | wrap_up | traces error code: 0 [2023-04-30 03:47:20] 2023-04-30 07:47:14,933 | INFO | root | wrap_up | pilot has finished (exit code=0, shell exit code=0) [2023-04-30 03:47:20] 2023-04-30 07:47:15,531 [wrapper] ==== pilot stdout END ==== [2023-04-30 03:47:20] 2023-04-30 07:47:15,687 [wrapper] ==== wrapper stdout RESUME ==== [2023-04-30 03:47:20] 2023-04-30 07:47:15,810 [wrapper] pilotpid: 32546 [2023-04-30 03:47:20] 2023-04-30 07:47:15,875 [wrapper] Pilot exit status: 0 [2023-04-30 03:47:20] 2023-04-30 07:47:16,223 [wrapper] pandaids: 5835780499 [2023-04-30 03:47:20] 2023-04-30 07:47:16,352 [wrapper] apfmon messages muted [2023-04-30 03:47:20] 2023-04-30 07:47:16,440 [wrapper] Test setup, not cleaning [2023-04-30 03:47:20] 2023-04-30 07:47:16,571 [wrapper] ==== wrapper stdout END ==== [2023-04-30 03:47:20] 2023-04-30 07:47:16,687 [wrapper] ==== wrapper stderr END ==== [2023-04-30 03:47:20] 2023-04-30 07:47:16,913 [wrapper] wrapperexiting ec=0, duration=2815 [2023-04-30 03:47:20] 2023-04-30 07:47:17,039 [wrapper] apfmon messages muted [2023-04-30 03:47:20] *** Error codes and diagnostics *** [2023-04-30 03:47:21] "exeErrorCode": 0, [2023-04-30 03:47:21] "exeErrorDiag": "", [2023-04-30 03:47:21] "pilotErrorCode": 0, [2023-04-30 03:47:21] "pilotErrorDiag": "", [2023-04-30 03:47:21] *** Listing of results directory *** [2023-04-30 03:47:21] total 43804 [2023-04-30 03:47:21] -rwx------ 1 boinc boinc 27540 Apr 30 02:38 runpilot2-wrapper.sh [2023-04-30 03:47:21] -rw-r--r-- 1 boinc boinc 4388 Apr 30 02:38 queuedata.json [2023-04-30 03:47:21] -rw------- 1 boinc boinc 413524 Apr 30 02:38 pilot3.tar.gz [2023-04-30 03:47:21] -rw-r--r-- 1 boinc boinc 107 Apr 30 03:00 wrapper_26015_x86_64-pc-linux-gnu [2023-04-30 03:47:21] -rwxr-xr-x 1 boinc boinc 7986 Apr 30 03:00 run_atlas [2023-04-30 03:47:21] -rw-r--r-- 1 boinc boinc 112 Apr 30 03:00 job.xml [2023-04-30 03:47:21] drwxrwx--x 2 boinc boinc 4096 Apr 30 03:00 shared [2023-04-30 03:47:21] -rw-r--r-- 2 boinc boinc 425366 Apr 30 03:00 input.tar.gz [2023-04-30 03:47:21] -rw-r--r-- 1 boinc boinc 9174 Apr 30 03:00 init_data.xml [2023-04-30 03:47:21] -rw-r--r-- 2 boinc boinc 37727106 Apr 30 03:00 EVNT.04972714._000037.pool.root.1 [2023-04-30 03:47:21] -rw-r--r-- 2 boinc boinc 17632 Apr 30 03:00 start_atlas.sh [2023-04-30 03:47:21] -rw-r--r-- 1 boinc boinc 0 Apr 30 03:00 boinc_lockfile [2023-04-30 03:47:21] -rw-r--r-- 1 boinc boinc 2662 Apr 30 03:00 pandaJob.out [2023-04-30 03:47:21] -rw------- 1 boinc boinc 424 Apr 30 03:00 setup.sh.local [2023-04-30 03:47:21] -rw------- 1 boinc boinc 1013360 Apr 30 03:02 agis_schedconf.cvmfs.json [2023-04-30 03:47:21] -rw------- 1 boinc boinc 1446236 Apr 30 03:03 cric_ddmendpoints.json [2023-04-30 03:47:21] drwx------ 4 boinc boinc 4096 Apr 30 03:04 pilot3 [2023-04-30 03:47:21] -rw------- 1 boinc boinc 1257583 Apr 30 03:39 output.1.7ff9f83c-6414-4497-9061-5b8685afef23_78713.pool.root [2023-04-30 03:47:21] -rw-r--r-- 1 boinc boinc 534 Apr 30 03:39 boinc_task_state.xml [2023-04-30 03:47:21] -rw------- 1 boinc boinc 1016 Apr 30 03:39 memory_monitor_summary.json [2023-04-30 03:47:21] -rw------- 1 boinc boinc 177808 Apr 30 03:42 7ff9f83c-6414-4497-9061-5b8685afef23_78713.1.job.log.tgz [2023-04-30 03:47:21] -rw-r--r-- 1 boinc boinc 8192 Apr 30 03:46 boinc_mmap_file [2023-04-30 03:47:21] -rw-r--r-- 1 boinc boinc 25 Apr 30 03:46 wrapper_checkpoint.txt [2023-04-30 03:47:21] -rw------- 1 boinc boinc 6601 Apr 30 03:46 heartbeat.json [2023-04-30 03:47:21] -rw------- 1 boinc boinc 8942 Apr 30 03:47 pilotlog.txt [2023-04-30 03:47:21] -rw------- 1 boinc boinc 356649 Apr 30 03:47 7ff9f83c-6414-4497-9061-5b8685afef23_78713.1.job.log [2023-04-30 03:47:21] -rw------- 1 boinc boinc 464 Apr 30 03:47 output.list [2023-04-30 03:47:21] -rw-r--r-- 1 boinc boinc 748 Apr 30 03:47 runtime_log [2023-04-30 03:47:21] -rw------- 1 boinc boinc 1812480 Apr 30 03:47 result.tar.gz [2023-04-30 03:47:21] -rw-r--r-- 1 boinc boinc 11957 Apr 30 03:47 runtime_log.err [2023-04-30 03:47:21] -rw------- 1 boinc boinc 631 Apr 30 03:47 RmJODmYsFD3n7Olcko1bjSoqABFKDmABFKDm7AsVDmEWIKDmf7qFQn.diag [2023-04-30 03:47:21] -rw-r--r-- 1 boinc boinc 29465 Apr 30 03:47 stderr.txt [2023-04-30 03:47:21] HITS file was successfully produced: [2023-04-30 03:47:21] -rw------- 1 boinc boinc 1257583 Apr 30 03:39 shared/HITS.pool.root.1 [2023-04-30 03:47:21] *** Contents of shared directory: *** [2023-04-30 03:47:21] total 40284 [2023-04-30 03:47:21] -rw-r--r-- 2 boinc boinc 425366 Apr 30 03:00 input.tar.gz [2023-04-30 03:47:21] -rw-r--r-- 2 boinc boinc 37727106 Apr 30 03:00 ATLAS.root_0 [2023-04-30 03:47:21] -rw-r--r-- 2 boinc boinc 17632 Apr 30 03:00 start_atlas.sh [2023-04-30 03:47:21] -rw------- 1 boinc boinc 1257583 Apr 30 03:39 HITS.pool.root.1 [2023-04-30 03:47:21] -rw------- 1 boinc boinc 1812480 Apr 30 03:47 result.tar.gz 03:47:22 (28756): run_atlas exited; CPU time 698.743352 03:47:22 (28756): called boinc_finish(0) </stderr_txt> ]]>
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