Name | rtoLDmW6HD3n7Olcko1bjSoqABFKDmABFKDm7AsVDmiWIKDmAwqCyn_0 |
Workunit | 2303710 |
Created | 30 Apr 2023, 9:00:59 UTC |
Sent | 30 Apr 2023, 9:02:27 UTC |
Report deadline | 7 May 2023, 9:02:27 UTC |
Received | 30 Apr 2023, 10:52:42 UTC |
Server state | Over |
Outcome | Success |
Client state | Done |
Exit status | 0 (0x00000000) |
Computer ID | 4433 |
Run time | 54 min 26 sec |
CPU time | 11 min 14 sec |
Validate state | Valid |
Credit | 31.40 |
Device peak FLOPS | 5.37 GFLOPS |
Application version | ATLAS Simulation v3.01 (native_mt) x86_64-pc-linux-gnu |
Peak working set size | 1.49 GB |
Peak swap size | 10.32 GB |
Peak disk usage | 81.03 MB |
<core_client_version>7.9.3</core_client_version> <![CDATA[ <stderr_txt> 05:09:07 (21876): wrapper (7.7.26015): starting 05:09:07 (21876): wrapper: running run_atlas (--nthreads 1) [2023-04-30 05:09:07] Arguments: --nthreads 1 [2023-04-30 05:09:07] Threads: 1 [2023-04-30 05:09:07] Checking for CVMFS [2023-04-30 05:09:10] Probing /cvmfs/atlas.cern.ch... OK [2023-04-30 05:09:12] Probing /cvmfs/atlas-condb.cern.ch... OK [2023-04-30 05:09:12] Running cvmfs_config stat atlas.cern.ch [2023-04-30 05:09:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE [2023-04-30 05:09:14] 2.9.2.0 22084 0 24564 118452 3 1 3522870 4194305 0 130560 0 0 0.000 823 1576 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1 [2023-04-30 05:09:14] CVMFS is ok [2023-04-30 05:09:14] Efficiency of ATLAS tasks can be improved by the following measure(s): [2023-04-30 05:09:14] Small home clusters do not require a local http proxy but it is suggested if [2023-04-30 05:09:14] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks. [2023-04-30 05:09:14] Further information can be found at the LHC@home message board. [2023-04-30 05:09:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 [2023-04-30 05:09:14] Checking for apptainer binary... [2023-04-30 05:09:14] apptainer is not installed, using version from CVMFS [2023-04-30 05:09:14] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname [2023-04-30 05:09:19] 2700x [2023-04-30 05:09:19] apptainer works [2023-04-30 05:09:19] Starting ATLAS job with PandaID=5835846682 [2023-04-30 05:09:19] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh [2023-04-30 06:03:30] *** The last 200 lines of the pilot log: *** [2023-04-30 06:03:30] 2023-04-30 10:03:08,461 | DEBUG | pilot.user.atlas.utilities | get_cpu_arch | CPU arch script returned: x86-64-v3 [2023-04-30 06:03:30] 2023-04-30 10:03:08,461 | DEBUG | pilot.control.job | get_data_structure | cpu arch=x86-64-v3 [2023-04-30 06:03:30] 2023-04-30 10:03:08,461 | INFO | pilot.user.atlas.utilities | get_memory_values | using path: /var/lib/boinc-client/slots/7/PanDA_Pilot-5835846682/memory_monitor_summary.json (trf na [2023-04-30 06:03:30] 2023-04-30 10:03:08,468 | DEBUG | pilot.user.atlas.utilities | get_memory_monitor_info | summary_dictionary={'Avg': {'nprocs': 5.121, 'nthreads': 5.878, 'pss': 959665.0, 'rchar': 30074354.0 [2023-04-30 06:03:30] 2023-04-30 10:03:08,468 | INFO | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard info from prmon json [2023-04-30 06:03:30] 2023-04-30 10:03:08,468 | INFO | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard memory fields from prmon json [2023-04-30 06:03:30] 2023-04-30 10:03:08,469 | INFO | pilot.util.timing | timing_report | .............................. [2023-04-30 06:03:30] 2023-04-30 10:03:08,469 | INFO | pilot.util.timing | timing_report | . Timing measurements: [2023-04-30 06:03:30] 2023-04-30 10:03:08,475 | INFO | pilot.util.timing | timing_report | . get job = 48 s [2023-04-30 06:03:30] 2023-04-30 10:03:08,476 | INFO | pilot.util.timing | timing_report | . initial setup = 76 s [2023-04-30 06:03:30] 2023-04-30 10:03:08,476 | INFO | pilot.util.timing | timing_report | . payload setup = 180 s [2023-04-30 06:03:30] 2023-04-30 10:03:08,476 | INFO | pilot.util.timing | timing_report | . stage-in = 54 s [2023-04-30 06:03:30] 2023-04-30 10:03:08,476 | INFO | pilot.util.timing | timing_report | . payload execution = 2064 s [2023-04-30 06:03:30] 2023-04-30 10:03:08,476 | INFO | pilot.util.timing | timing_report | . stage-out = 350 s [2023-04-30 06:03:30] 2023-04-30 10:03:08,476 | INFO | pilot.util.timing | timing_report | .............................. [2023-04-30 06:03:30] 2023-04-30 10:03:08,476 | DEBUG | pilot.control.job | send_state | data={'jobId': '5835846682', 'state': 'finished', 'timestamp': '2023-04-30T06:01:27-05:00', 'siteNam [2023-04-30 06:03:30] 2023-04-30 10:03:08,478 | DEBUG | pilot.control.job | write_heartbeat_to_file | heartbeat dictionary: {'jobId': '5835846682', 'state': 'finished', 'timestamp': '2023-04-30T06:01:27 [2023-04-30 06:03:30] 2023-04-30 10:03:08,478 | DEBUG | pilot.control.job | write_heartbeat_to_file | wrote heartbeat to file: /var/lib/boinc-client/slots/7/heartbeat.json [2023-04-30 06:03:30] 2023-04-30 10:03:08,731 | INFO | pilot.control.job | make_job_report | [2023-04-30 06:03:30] 2023-04-30 10:03:08,732 | INFO | pilot.control.job | make_job_report | job summary report [2023-04-30 06:03:30] 2023-04-30 10:03:08,733 | INFO | pilot.control.job | make_job_report | -------------------------------------------------- [2023-04-30 06:03:30] 2023-04-30 10:03:08,733 | INFO | pilot.control.job | make_job_report | PanDA job id: 5835846682 [2023-04-30 06:03:30] 2023-04-30 10:03:08,734 | INFO | pilot.control.job | make_job_report | task id: NULL [2023-04-30 06:03:30] 2023-04-30 10:03:08,734 | INFO | pilot.control.job | make_job_report | errors: (none) [2023-04-30 06:03:30] 2023-04-30 10:03:08,739 | INFO | pilot.control.job | make_job_report | status: LOG_TRANSFER = DONE [2023-04-30 06:03:30] 2023-04-30 10:03:08,740 | INFO | pilot.control.job | make_job_report | pilot state: finished [2023-04-30 06:03:30] 2023-04-30 10:03:08,741 | INFO | pilot.control.job | make_job_report | transexitcode: 0 [2023-04-30 06:03:30] 2023-04-30 10:03:08,741 | INFO | pilot.control.job | make_job_report | exeerrorcode: 0 [2023-04-30 06:03:30] 2023-04-30 10:03:08,742 | INFO | pilot.control.job | make_job_report | exeerrordiag: [2023-04-30 06:03:30] 2023-04-30 10:03:08,742 | INFO | pilot.control.job | make_job_report | exitcode: 0 [2023-04-30 06:03:30] 2023-04-30 10:03:08,747 | INFO | pilot.control.job | make_job_report | exitmsg: OK [2023-04-30 06:03:30] 2023-04-30 10:03:08,748 | INFO | pilot.control.job | make_job_report | cpuconsumptiontime: 663 s [2023-04-30 06:03:30] 2023-04-30 10:03:08,748 | INFO | pilot.control.job | make_job_report | nevents: 2 [2023-04-30 06:03:30] 2023-04-30 10:03:08,749 | INFO | pilot.control.job | make_job_report | neventsw: 0 [2023-04-30 06:03:30] 2023-04-30 10:03:08,749 | INFO | pilot.control.job | make_job_report | pid: 709 [2023-04-30 06:03:30] 2023-04-30 10:03:08,750 | INFO | pilot.control.job | make_job_report | pgrp: 709 [2023-04-30 06:03:30] 2023-04-30 10:03:08,750 | INFO | pilot.control.job | make_job_report | corecount: 1 [2023-04-30 06:03:30] 2023-04-30 10:03:08,751 | INFO | pilot.control.job | make_job_report | event service: False [2023-04-30 06:03:30] 2023-04-30 10:03:08,752 | INFO | pilot.control.job | make_job_report | sizes: {0: 2578685, 1: 2578884, 2: 2578884, 13: 2578912, 24: 2578968, 35: 2578996, 45: 2579152, 56: [2023-04-30 06:03:30] 2023-04-30 10:03:08,752 | INFO | pilot.control.job | make_job_report | -------------------------------------------------- [2023-04-30 06:03:30] 2023-04-30 10:03:08,752 | INFO | pilot.control.job | make_job_report | [2023-04-30 06:03:30] 2023-04-30 10:03:08,753 | DEBUG | pilot.control.job | has_job_completed | ls -lF /var/lib/boinc-client/slots/7: [2023-04-30 06:03:30] [2023-04-30 06:03:30] 2023-04-30 10:03:08,754 | INFO | pilot.util.container | print_executable | executing command: ls -lF /var/lib/boinc-client/slots/7 [2023-04-30 06:03:30] 2023-04-30 10:03:09,342 | DEBUG | pilot.control.job | has_job_completed | total 42384 [2023-04-30 06:03:30] -rw------- 1 boinc boinc 381130 Apr 30 06:03 9a5aa7bd-824b-4801-b5a0-341ca1842bb3_81944.1.job.log [2023-04-30 06:03:30] -rw------- 1 boinc boinc 180084 Apr 30 05:58 9a5aa7bd-824b-4801-b5a0-341ca1842bb3_81944.1.job.log.tgz [2023-04-30 06:03:30] -rw------- 1 boinc boinc 1013034 Apr 30 05:13 agis_schedconf.cvmfs.json [2023-04-30 06:03:30] -rw-r--r-- 1 boinc boinc 0 Apr 30 05:09 boinc_lockfile [2023-04-30 06:03:30] -rw-r--r-- 1 boinc boinc 8192 Apr 30 06:02 boinc_mmap_file [2023-04-30 06:03:30] -rw-r--r-- 1 boinc boinc 534 Apr 30 05:55 boinc_task_state.xml [2023-04-30 06:03:30] -rw------- 1 boinc boinc 1446236 Apr 30 05:12 cric_ddmendpoints.json [2023-04-30 06:03:30] -rw-r--r-- 2 boinc boinc 37727106 Apr 30 05:09 EVNT.04972714._000037.pool.root.1 [2023-04-30 06:03:30] -rw------- 1 boinc boinc 6597 Apr 30 06:03 heartbeat.json [2023-04-30 06:03:30] -rw-r--r-- 1 boinc boinc 9173 Apr 30 05:09 init_data.xml [2023-04-30 06:03:30] -rw-r--r-- 2 boinc boinc 425369 Apr 30 05:09 input.tar.gz [2023-04-30 06:03:30] -rw-r--r-- 1 boinc boinc 112 Apr 30 05:09 job.xml [2023-04-30 06:03:30] -rw------- 1 boinc boinc 1019 Apr 30 05:55 memory_monitor_summary.json [2023-04-30 06:03:30] -rw------- 1 boinc boinc 1257578 Apr 30 05:55 output.1.9a5aa7bd-824b-4801-b5a0-341ca1842bb3_81944.pool.root [2023-04-30 06:03:30] -rw------- 1 boinc boinc 464 Apr 30 06:01 output.list [2023-04-30 06:03:30] -rw-r--r-- 1 boinc boinc 2662 Apr 30 05:09 pandaJob.out [2023-04-30 06:03:30] drwxrwx--- 2 boinc boinc 4096 Apr 30 06:01 PanDA_Pilot-5835846682/ [2023-04-30 06:03:30] drwx------ 4 boinc boinc 4096 Apr 30 05:13 pilot3/ [2023-04-30 06:03:30] -rw------- 1 boinc boinc 413524 Apr 30 05:00 pilot3.tar.gz [2023-04-30 06:03:30] -rw------- 1 boinc boinc 368981 Apr 30 06:03 pilotlog.txt [2023-04-30 06:03:30] -rw-r--r-- 1 boinc boinc 4388 Apr 30 05:00 queuedata.json [2023-04-30 06:03:30] -rw------- 1 boinc boinc 128 Apr 30 05:09 rtoLDmW6HD3n7Olcko1bjSoqABFKDmABFKDm7AsVDmiWIKDmAwqCyn.diag [2023-04-30 06:03:30] -rwxr-xr-x 1 boinc boinc 7986 Apr 30 05:09 run_atlas* [2023-04-30 06:03:30] -rwx------ 1 boinc boinc 27540 Apr 30 05:00 runpilot2-wrapper.sh* [2023-04-30 06:03:30] -rw-r--r-- 1 boinc boinc 407 Apr 30 05:09 runtime_log [2023-04-30 06:03:30] -rw-r--r-- 1 boinc boinc 7825 Apr 30 05:09 runtime_log.err [2023-04-30 06:03:30] -rw------- 1 boinc boinc 424 Apr 30 05:09 setup.sh.local [2023-04-30 06:03:30] drwxrwx--x 2 boinc boinc 4096 Apr 30 05:09 shared/ [2023-04-30 06:03:30] -rw-r--r-- 2 boinc boinc 17632 Apr 30 05:09 start_atlas.sh [2023-04-30 06:03:30] -rw-r--r-- 1 boinc boinc 2026 Apr 30 05:09 stderr.txt [2023-04-30 06:03:30] -rw-r--r-- 1 boinc boinc 107 Apr 30 05:09 wrapper_26015_x86_64-pc-linux-gnu [2023-04-30 06:03:30] -rw-r--r-- 1 boinc boinc 25 Apr 30 06:02 wrapper_checkpoint.txt [2023-04-30 06:03:30] 2023-04-30 10:03:09,348 | INFO | pilot.util.queuehandling | queue_report | queue jobs had 0 job(s) [purged] [2023-04-30 06:03:30] 2023-04-30 10:03:09,348 | INFO | pilot.util.queuehandling | queue_report | queue payloads had 0 job(s) [purged] [2023-04-30 06:03:30] 2023-04-30 10:03:09,348 | INFO | pilot.util.queuehandling | queue_report | queue data_in had 0 job(s) [purged] [2023-04-30 06:03:30] 2023-04-30 10:03:09,348 | INFO | pilot.util.queuehandling | queue_report | queue data_out had 0 job(s) [purged] [2023-04-30 06:03:30] 2023-04-30 10:03:09,348 | INFO | pilot.util.queuehandling | queue_report | queue current_data_in had 0 job(s) [purged] [2023-04-30 06:03:30] 2023-04-30 10:03:09,348 | INFO | pilot.util.queuehandling | queue_report | queue validated_jobs had 0 job(s) [purged] [2023-04-30 06:03:30] 2023-04-30 10:03:09,348 | INFO | pilot.util.queuehandling | queue_report | queue validated_payloads had 0 job(s) [purged] [2023-04-30 06:03:30] 2023-04-30 10:03:09,349 | INFO | pilot.util.queuehandling | queue_report | queue monitored_payloads had 0 job(s) [purged] [2023-04-30 06:03:30] 2023-04-30 10:03:09,349 | INFO | pilot.util.queuehandling | queue_report | queue finished_jobs had 0 job(s) [purged] [2023-04-30 06:03:30] 2023-04-30 10:03:09,349 | INFO | pilot.util.queuehandling | queue_report | queue finished_payloads had 0 job(s) [purged] [2023-04-30 06:03:30] 2023-04-30 10:03:09,349 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_in had 1 job(s) [purged] [2023-04-30 06:03:30] 2023-04-30 10:03:09,350 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_out had 0 job(s) [purged] [2023-04-30 06:03:30] 2023-04-30 10:03:09,350 | INFO | pilot.util.queuehandling | queue_report | queue failed_jobs had 0 job(s) [purged] [2023-04-30 06:03:30] 2023-04-30 10:03:09,350 | INFO | pilot.util.queuehandling | queue_report | queue failed_payloads had 0 job(s) [purged] [2023-04-30 06:03:30] 2023-04-30 10:03:09,350 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_in had 0 job(s) [purged] [2023-04-30 06:03:30] 2023-04-30 10:03:09,355 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_out had 0 job(s) [purged] [2023-04-30 06:03:30] 2023-04-30 10:03:09,356 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobs had 0 job(s) [purged] [2023-04-30 06:03:30] 2023-04-30 10:03:09,356 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobids has 1 job(s) [2023-04-30 06:03:30] 2023-04-30 10:03:09,356 | INFO | pilot.util.queuehandling | queue_report | queue realtimelog_payloads had 0 job(s) [purged] [2023-04-30 06:03:30] 2023-04-30 10:03:09,357 | INFO | pilot.util.queuehandling | queue_report | queue messages had 0 job(s) [purged] [2023-04-30 06:03:30] 2023-04-30 10:03:09,357 | INFO | pilot.control.job | has_job_completed | job 5835846682 has completed (purged errors) [2023-04-30 06:03:30] 2023-04-30 10:03:09,358 | DEBUG | pilot.util.realtimelogger | cleanup | attempting real-time logger cleanup [2023-04-30 06:03:30] 2023-04-30 10:03:09,358 | INFO | pilot.util.processes | cleanup | overall cleanup function is called [2023-04-30 06:03:30] 2023-04-30 10:03:09,384 | DEBUG | pilot.util.processes | cleanup | work directory was removed: /var/lib/boinc-client/slots/7/PanDA_Pilot-5835846682 [2023-04-30 06:03:30] 2023-04-30 10:03:10,387 | INFO | pilot.info.jobdata | collect_zombies | --- collectZombieJob: --- 10, [709] [2023-04-30 06:03:30] 2023-04-30 10:03:10,388 | INFO | pilot.info.jobdata | collect_zombies | zombie collector trying to kill pid 709 [2023-04-30 06:03:30] 2023-04-30 10:03:10,388 | INFO | pilot.info.jobdata | collect_zombies | harmless exception when collecting zombies: [Errno 10] No child processes [2023-04-30 06:03:30] 2023-04-30 10:03:11,395 | INFO | pilot.util.processes | cleanup | collected zombie processes [2023-04-30 06:03:30] 2023-04-30 10:03:11,396 | INFO | pilot.util.processes | cleanup | will now attempt to kill all subprocesses of pid=709 [2023-04-30 06:03:30] 2023-04-30 10:03:12,188 | INFO | pilot.util.processes | kill_processes | process IDs to be killed: [709] (in reverse order) [2023-04-30 06:03:30] 2023-04-30 10:03:12,688 | WARNING | pilot.util.processes | kill_processes | found no corresponding commands to process id(s) [2023-04-30 06:03:30] 2023-04-30 10:03:12,689 | INFO | pilot.util.processes | kill_orphans | Do not look for orphan processes in BOINC jobs [2023-04-30 06:03:30] 2023-04-30 10:03:12,689 | DEBUG | pilot.util.queuehandling | purge_queue | queue purged [2023-04-30 06:03:30] 2023-04-30 10:03:12,689 | INFO | pilot.control.job | retrieve | ready for new job [2023-04-30 06:03:30] 2023-04-30 10:03:12,689 | INFO | root | retrieve | pilot has finished with previous job - re-establishing logging [2023-04-30 06:03:30] 2023-04-30 10:03:12,690 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************** [2023-04-30 06:03:30] 2023-04-30 10:03:12,695 | INFO | pilot.util.auxiliary | pilot_version_banner | *** PanDA Pilot version 3.6.0 (68) *** [2023-04-30 06:03:30] 2023-04-30 10:03:12,695 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************** [2023-04-30 06:03:30] 2023-04-30 10:03:12,696 | INFO | pilot.util.auxiliary | pilot_version_banner | [2023-04-30 06:03:30] 2023-04-30 10:03:12,716 | INFO | pilot.util.auxiliary | display_architecture_info | architecture information: [2023-04-30 06:03:30] 2023-04-30 10:03:12,724 | INFO | pilot.util.container | print_executable | executing command: cat /etc/os-release [2023-04-30 06:03:30] 2023-04-30 10:03:12,944 | INFO | pilot.util.filehandling | dump | cat /etc/os-release: [2023-04-30 06:03:30] NAME="CentOS Linux" [2023-04-30 06:03:30] VERSION="7 (Core)" [2023-04-30 06:03:30] ID="centos" [2023-04-30 06:03:30] ID_LIKE="rhel fedora" [2023-04-30 06:03:30] VERSION_ID="7" [2023-04-30 06:03:30] PRETTY_NAME="CentOS Linux 7 (Core)" [2023-04-30 06:03:30] ANSI_COLOR="0;31" [2023-04-30 06:03:30] CPE_NAME="cpe:/o:centos:centos:7" [2023-04-30 06:03:30] HOME_URL="https://www.centos.org/" [2023-04-30 06:03:30] BUG_REPORT_URL="https://bugs.centos.org/" [2023-04-30 06:03:30] [2023-04-30 06:03:30] CENTOS_MANTISBT_PROJECT="CentOS-7" [2023-04-30 06:03:30] CENTOS_MANTISBT_PROJECT_VERSION="7" [2023-04-30 06:03:30] REDHAT_SUPPORT_PRODUCT="centos" [2023-04-30 06:03:30] REDHAT_SUPPORT_PRODUCT_VERSION="7" [2023-04-30 06:03:30] [2023-04-30 06:03:30] 2023-04-30 10:03:12,945 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************** [2023-04-30 06:03:30] 2023-04-30 10:03:13,451 | DEBUG | pilot.util.monitoring | check_local_space | checking local space on /var/lib/boinc-client/slots/7 [2023-04-30 06:03:30] 2023-04-30 10:03:13,452 | INFO | pilot.util.container | print_executable | executing command: df -mP /var/lib/boinc-client/slots/7 [2023-04-30 06:03:30] 2023-04-30 10:03:13,749 | DEBUG | pilot.util.workernode | get_local_disk_space | stdout=Filesystem 1048576-blocks Used Available Capacity Mounted on [2023-04-30 06:03:30] /dev/nvme0n1p2 479119 165904 288807 37% /var/lib/boinc-client/slots/7 [2023-04-30 06:03:30] 2023-04-30 10:03:13,749 | DEBUG | pilot.util.workernode | get_local_disk_space | stderr= [2023-04-30 06:03:30] 2023-04-30 10:03:13,750 | INFO | pilot.util.monitoring | check_local_space | sufficient remaining disk space (302836088832 B) [2023-04-30 06:03:30] 2023-04-30 10:03:13,750 | WARNING | pilot.control.job | proceed_with_getjob | since timefloor is set to 0, pilot was only allowed to run one job [2023-04-30 06:03:30] 2023-04-30 10:03:13,750 | DEBUG | pilot.control.job | retrieve | will not set job_aborted yet [2023-04-30 06:03:30] 2023-04-30 10:03:13,750 | INFO | pilot.control.job | retrieve | [job] retrieve thread has finished [2023-04-30 06:03:30] 2023-04-30 10:03:13,751 | WARNING | pilot.control.monitor | control | aborting monitor loop since graceful_stop has been set [2023-04-30 06:03:30] 2023-04-30 10:03:13,751 | WARNING | pilot.util.common | should_abort | job:queue_monitor:received graceful stop - abort after this iteration [2023-04-30 06:03:30] 2023-04-30 10:03:13,759 | INFO | pilot.control.monitor | control | [monitor] control thread has ended [2023-04-30 06:03:30] 2023-04-30 10:03:13,764 | DEBUG | pilot.control.job | queue_monitor | will not set job_aborted yet [2023-04-30 06:03:30] 2023-04-30 10:03:13,771 | INFO | pilot.control.job | queue_monitor | [job] queue monitor thread has finished [2023-04-30 06:03:30] 2023-04-30 10:03:14,323 | DEBUG | pilot.control.job | validate | will not set job_aborted yet [2023-04-30 06:03:30] 2023-04-30 10:03:14,324 | INFO | pilot.control.job | validate | [job] validate thread has finished [2023-04-30 06:03:30] 2023-04-30 10:03:14,324 | WARNING | pilot.util.common | should_abort | data:copytool_out:received graceful stop - abort after this iteration [2023-04-30 06:03:30] 2023-04-30 10:03:14,363 | DEBUG | pilot.control.job | control | job control ending since graceful_stop has been set [2023-04-30 06:03:30] 2023-04-30 10:03:14,364 | DEBUG | pilot.control.job | control | will not set job_aborted yet [2023-04-30 06:03:30] 2023-04-30 10:03:14,364 | INFO | pilot.control.job | control | [job] control thread has finished [2023-04-30 06:03:30] 2023-04-30 10:03:14,452 | DEBUG | pilot.control.payload | validate_post | will not set job_aborted yet [2023-04-30 06:03:30] 2023-04-30 10:03:14,452 | INFO | pilot.control.payload | validate_post | [payload] validate_post thread has finished [2023-04-30 06:03:30] 2023-04-30 10:03:14,667 | DEBUG | pilot.control.data | control | data control ending since graceful_stop has been set [2023-04-30 06:03:30] 2023-04-30 10:03:14,668 | DEBUG | pilot.control.data | control | will not set job_aborted yet [2023-04-30 06:03:30] 2023-04-30 10:03:14,668 | INFO | pilot.control.data | control | [data] control thread has finished [2023-04-30 06:03:30] 2023-04-30 10:03:14,696 | DEBUG | pilot.control.payload | execute_payloads | will not set job_aborted yet [2023-04-30 06:03:30] 2023-04-30 10:03:14,696 | INFO | pilot.control.payload | execute_payloads | [payload] execute_payloads thread has finished [2023-04-30 06:03:30] 2023-04-30 10:03:14,720 | DEBUG | pilot.control.job | create_data_payload | will not set job_aborted yet [2023-04-30 06:03:30] 2023-04-30 10:03:14,721 | INFO | pilot.control.job | create_data_payload | [job] create_data_payload thread has finished [2023-04-30 06:03:30] 2023-04-30 10:03:14,727 | DEBUG | pilot.control.payload | validate_pre | will not set job_aborted yet [2023-04-30 06:03:30] 2023-04-30 10:03:14,728 | INFO | pilot.control.payload | validate_pre | [payload] validate_pre thread has finished [2023-04-30 06:03:30] 2023-04-30 10:03:15,183 | DEBUG | pilot.control.data | copytool_in | will not set job_aborted yet [2023-04-30 06:03:30] 2023-04-30 10:03:15,184 | INFO | pilot.control.data | copytool_in | [data] copytool_in thread has finished [2023-04-30 06:03:30] 2023-04-30 10:03:15,243 | DEBUG | pilot.control.payload | control | payload control ending since graceful_stop has been set [2023-04-30 06:03:30] 2023-04-30 10:03:15,244 | DEBUG | pilot.control.payload | control | will not set job_aborted yet [2023-04-30 06:03:30] 2023-04-30 10:03:15,244 | INFO | pilot.control.payload | control | [payload] control thread has finished [2023-04-30 06:03:30] 2023-04-30 10:03:15,327 | DEBUG | pilot.control.data | copytool_out | will not set job_aborted yet [2023-04-30 06:03:30] 2023-04-30 10:03:15,328 | INFO | pilot.control.data | copytool_out | [data] copytool_out thread has finished [2023-04-30 06:03:30] 2023-04-30 10:03:15,335 | DEBUG | pilot.control.payload | failed_post | will not set job_aborted yet [2023-04-30 06:03:30] 2023-04-30 10:03:15,336 | INFO | pilot.control.payload | failed_post | [payload] failed_post thread has finished [2023-04-30 06:03:30] 2023-04-30 10:03:16,691 | WARNING | pilot.util.common | should_abort | data:queue_monitoring:received graceful stop - abort after this iteration [2023-04-30 06:03:30] 2023-04-30 10:03:19,699 | DEBUG | pilot.control.data | queue_monitoring | will not set job_aborted yet [2023-04-30 06:03:30] 2023-04-30 10:03:19,699 | INFO | pilot.control.data | queue_monitoring | [data] queue_monitor thread has finished [2023-04-30 06:03:30] 2023-04-30 10:03:23,983 | INFO | pilot.control.payload | get_logging_info | job.realtimelogging is not enabled [2023-04-30 06:03:30] 2023-04-30 10:03:23,984 | DEBUG | pilot.control.payload | run_realtimelog | real-time logging not needed at this point [2023-04-30 06:03:30] 2023-04-30 10:03:23,984 | DEBUG | pilot.control.payload | run_realtimelog | realtime logger was not found, waiting .. [2023-04-30 06:03:30] 2023-04-30 10:03:23,984 | DEBUG | pilot.control.payload | run_realtimelog | will not set job_aborted yet [2023-04-30 06:03:30] 2023-04-30 10:03:23,984 | INFO | pilot.control.payload | run_realtimelog | [payload] run_realtimelog thread has finished [2023-04-30 06:03:30] 2023-04-30 10:03:24,875 | DEBUG | pilot.util.processes | threads_aborted | aborting since only the main Pilot thread is still running (total thread count=1 with 0 daemon threa [2023-04-30 06:03:30] 2023-04-30 10:03:24,876 | DEBUG | pilot.workflow.generic | run | all relevant threads have aborted (thread count=1) [2023-04-30 06:03:30] 2023-04-30 10:03:24,876 | INFO | pilot.workflow.generic | run | end of generic workflow (traces error code: 0) [2023-04-30 06:03:30] 2023-04-30 10:03:24,876 | INFO | root | wrap_up | traces error code: 0 [2023-04-30 06:03:30] 2023-04-30 10:03:24,876 | INFO | root | wrap_up | pilot has finished (exit code=0, shell exit code=0) [2023-04-30 06:03:30] 2023-04-30 10:03:25,343 [wrapper] ==== pilot stdout END ==== [2023-04-30 06:03:30] 2023-04-30 10:03:25,487 [wrapper] ==== wrapper stdout RESUME ==== [2023-04-30 06:03:30] 2023-04-30 10:03:25,560 [wrapper] pilotpid: 25669 [2023-04-30 06:03:30] 2023-04-30 10:03:25,680 [wrapper] Pilot exit status: 0 [2023-04-30 06:03:30] 2023-04-30 10:03:26,051 [wrapper] pandaids: 5835846682 [2023-04-30 06:03:30] 2023-04-30 10:03:26,163 [wrapper] apfmon messages muted [2023-04-30 06:03:30] 2023-04-30 10:03:26,195 [wrapper] Test setup, not cleaning [2023-04-30 06:03:30] 2023-04-30 10:03:26,232 [wrapper] ==== wrapper stdout END ==== [2023-04-30 06:03:30] 2023-04-30 10:03:26,284 [wrapper] ==== wrapper stderr END ==== [2023-04-30 06:03:30] 2023-04-30 10:03:26,484 [wrapper] wrapperexiting ec=0, duration=3241 [2023-04-30 06:03:30] 2023-04-30 10:03:26,526 [wrapper] apfmon messages muted [2023-04-30 06:03:30] *** Error codes and diagnostics *** [2023-04-30 06:03:30] "exeErrorCode": 0, [2023-04-30 06:03:30] "exeErrorDiag": "", [2023-04-30 06:03:30] "pilotErrorCode": 0, [2023-04-30 06:03:30] "pilotErrorDiag": "", [2023-04-30 06:03:30] *** Listing of results directory *** [2023-04-30 06:03:30] total 43884 [2023-04-30 06:03:30] -rwx------ 1 boinc boinc 27540 Apr 30 05:00 runpilot2-wrapper.sh [2023-04-30 06:03:30] -rw-r--r-- 1 boinc boinc 4388 Apr 30 05:00 queuedata.json [2023-04-30 06:03:30] -rw------- 1 boinc boinc 413524 Apr 30 05:00 pilot3.tar.gz [2023-04-30 06:03:30] -rw-r--r-- 1 boinc boinc 107 Apr 30 05:09 wrapper_26015_x86_64-pc-linux-gnu [2023-04-30 06:03:30] -rwxr-xr-x 1 boinc boinc 7986 Apr 30 05:09 run_atlas [2023-04-30 06:03:30] -rw-r--r-- 1 boinc boinc 112 Apr 30 05:09 job.xml [2023-04-30 06:03:30] -rw-r--r-- 2 boinc boinc 17632 Apr 30 05:09 start_atlas.sh [2023-04-30 06:03:30] drwxrwx--x 2 boinc boinc 4096 Apr 30 05:09 shared [2023-04-30 06:03:30] -rw-r--r-- 2 boinc boinc 425369 Apr 30 05:09 input.tar.gz [2023-04-30 06:03:30] -rw-r--r-- 1 boinc boinc 9173 Apr 30 05:09 init_data.xml [2023-04-30 06:03:30] -rw-r--r-- 2 boinc boinc 37727106 Apr 30 05:09 EVNT.04972714._000037.pool.root.1 [2023-04-30 06:03:30] -rw-r--r-- 1 boinc boinc 0 Apr 30 05:09 boinc_lockfile [2023-04-30 06:03:30] -rw-r--r-- 1 boinc boinc 2662 Apr 30 05:09 pandaJob.out [2023-04-30 06:03:30] -rw------- 1 boinc boinc 424 Apr 30 05:09 setup.sh.local [2023-04-30 06:03:30] -rw------- 1 boinc boinc 1446236 Apr 30 05:12 cric_ddmendpoints.json [2023-04-30 06:03:30] -rw------- 1 boinc boinc 1013034 Apr 30 05:13 agis_schedconf.cvmfs.json [2023-04-30 06:03:30] drwx------ 4 boinc boinc 4096 Apr 30 05:13 pilot3 [2023-04-30 06:03:30] -rw------- 1 boinc boinc 1257578 Apr 30 05:55 output.1.9a5aa7bd-824b-4801-b5a0-341ca1842bb3_81944.pool.root [2023-04-30 06:03:30] -rw-r--r-- 1 boinc boinc 534 Apr 30 05:55 boinc_task_state.xml [2023-04-30 06:03:30] -rw------- 1 boinc boinc 1019 Apr 30 05:55 memory_monitor_summary.json [2023-04-30 06:03:30] -rw------- 1 boinc boinc 180084 Apr 30 05:58 9a5aa7bd-824b-4801-b5a0-341ca1842bb3_81944.1.job.log.tgz [2023-04-30 06:03:30] -rw------- 1 boinc boinc 6597 Apr 30 06:03 heartbeat.json [2023-04-30 06:03:30] -rw------- 1 boinc boinc 8939 Apr 30 06:03 pilotlog.txt [2023-04-30 06:03:30] -rw------- 1 boinc boinc 398056 Apr 30 06:03 9a5aa7bd-824b-4801-b5a0-341ca1842bb3_81944.1.job.log [2023-04-30 06:03:30] -rw------- 1 boinc boinc 464 Apr 30 06:03 output.list [2023-04-30 06:03:30] -rw-r--r-- 1 boinc boinc 748 Apr 30 06:03 runtime_log [2023-04-30 06:03:30] -rw------- 1 boinc boinc 1853440 Apr 30 06:03 result.tar.gz [2023-04-30 06:03:30] -rw-r--r-- 1 boinc boinc 11940 Apr 30 06:03 runtime_log.err [2023-04-30 06:03:30] -rw------- 1 boinc boinc 631 Apr 30 06:03 rtoLDmW6HD3n7Olcko1bjSoqABFKDmABFKDm7AsVDmiWIKDmAwqCyn.diag [2023-04-30 06:03:30] -rw-r--r-- 1 boinc boinc 25 Apr 30 06:03 wrapper_checkpoint.txt [2023-04-30 06:03:30] -rw-r--r-- 1 boinc boinc 8192 Apr 30 06:03 boinc_mmap_file [2023-04-30 06:03:30] -rw-r--r-- 1 boinc boinc 29454 Apr 30 06:03 stderr.txt [2023-04-30 06:03:30] HITS file was successfully produced: [2023-04-30 06:03:30] -rw------- 1 boinc boinc 1257578 Apr 30 05:55 shared/HITS.pool.root.1 [2023-04-30 06:03:30] *** Contents of shared directory: *** [2023-04-30 06:03:30] total 40324 [2023-04-30 06:03:30] -rw-r--r-- 2 boinc boinc 17632 Apr 30 05:09 start_atlas.sh [2023-04-30 06:03:30] -rw-r--r-- 2 boinc boinc 425369 Apr 30 05:09 input.tar.gz [2023-04-30 06:03:30] -rw-r--r-- 2 boinc boinc 37727106 Apr 30 05:09 ATLAS.root_0 [2023-04-30 06:03:30] -rw------- 1 boinc boinc 1257578 Apr 30 05:55 HITS.pool.root.1 [2023-04-30 06:03:30] -rw------- 1 boinc boinc 1853440 Apr 30 06:03 result.tar.gz 06:03:32 (21876): run_atlas exited; CPU time 674.263148 06:03:32 (21876): called boinc_finish(0) </stderr_txt> ]]>
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