Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
14:25:01 (137351): wrapper (7.7.26015): starting
14:25:01 (137351): wrapper: running run_atlas (--nthreads 1)
[2023-04-30 14:25:01] Arguments: --nthreads 1
[2023-04-30 14:25:01] Threads: 1
[2023-04-30 14:25:01] Checking for CVMFS
[2023-04-30 14:25:02] Probing /cvmfs/atlas.cern.ch... OK
[2023-04-30 14:25:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2023-04-30 14:25:03] Running cvmfs_config stat atlas.cern.ch
[2023-04-30 14:25:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2023-04-30 14:25:03] 2.9.2.0 4149347 54 45508 118468 3 1 3533914 4194304 0 130560 0 91081 97.772 200062 2691 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 1
[2023-04-30 14:25:03] CVMFS is ok
[2023-04-30 14:25:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2023-04-30 14:25:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2023-04-30 14:25:03] Small home clusters do not require a local http proxy but it is suggested if
[2023-04-30 14:25:03] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2023-04-30 14:25:03] Further information can be found at the LHC@home message board.
[2023-04-30 14:25:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2023-04-30 14:25:03] Checking for apptainer binary...
[2023-04-30 14:25:03] apptainer is not installed, using version from CVMFS
[2023-04-30 14:25:03] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2023-04-30 14:25:04] WC5950
[2023-04-30 14:25:04] apptainer works
[2023-04-30 14:25:04] Starting ATLAS job with PandaID=5836135238
[2023-04-30 14:25:04] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/26 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2023-04-30 14:53:05]  *** The last 200 lines of the pilot log: ***
[2023-04-30 14:53:05] 2023-04-30 18:51:35,426 | INFO     | [attempt=3/3] loading data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json
[2023-04-30 14:53:05] 2023-04-30 18:51:35,660 | WARNING  | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: 
[2023-04-30 14:53:05] 2023-04-30 18:51:35,661 | WARNING  | cache file=/var/lib/boinc-client/slots/26/agis_ddmendpoints.agis.ALL.json is not available: [Errno 2] No such file or directory: '/var/lib/boinc-client/slots/26/ag
[2023-04-30 14:53:05] 2023-04-30 18:51:35,701 | INFO     | Resolved protocol to be used for transfer: '{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}': l
[2023-04-30 14:53:05] 2023-04-30 18:51:35,702 | INFO     | ready to transfer (stage-out) files: [ accessmode=
[2023-04-30 14:53:05]  activity=['pl', 'pw', 'w', 'default']
[2023-04-30 14:53:05]  allow_lan=True
[2023-04-30 14:53:05]  allow_wan=False
[2023-04-30 14:53:05]  checkinputsize=True
[2023-04-30 14:53:05]  checksum={'adler32': '83ca27db'}
[2023-04-30 14:53:05]  dataset=hc_test.gangarbt.hc20265516.tid1184.BOINC-TEST.140
[2023-04-30 14:53:05]  ddm_activity=['write_lan', 'write_wan']
[2023-04-30 14:53:05]  ddmendpoint=NDGF-T1_DATADISK
[2023-04-30 14:53:05]  direct_access_lan=False
[2023-04-30 14:53:05]  direct_access_wan=False
[2023-04-30 14:53:05]  domain=
[2023-04-30 14:53:05]  filesize=155318
[2023-04-30 14:53:05]  filetype=log
[2023-04-30 14:53:05]  guid=49e4a65b-e1bb-4146-9c72-4809a8af30cf
[2023-04-30 14:53:05]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2023-04-30 14:53:05]  is_tar=False
[2023-04-30 14:53:05]  lfn=5c19ffa6-c707-4970-838f-579bace9ecca_23937.1.job.log.tgz
[2023-04-30 14:53:05]  mtime=0
[2023-04-30 14:53:05]  protocol_id=None
[2023-04-30 14:53:05]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2023-04-30 14:53:05]  replicas=None
[2023-04-30 14:53:05]  scope=hc_test
[2023-04-30 14:53:05]  status=None
[2023-04-30 14:53:05]  status_code=0
[2023-04-30 14:53:05]  storage_token=
[2023-04-30 14:53:05]  surl=/var/lib/boinc-client/slots/26/PanDA_Pilot-5836135238/5c19ffa6-c707-4970-838f-579bace9ecca_23937.1.job.log.tgz
[2023-04-30 14:53:05]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/63/63/5c19ffa6-c707-4970-838f-579bace9ecca_23937.1.job.log.tgz
[2023-04-30 14:53:05]  workdir=None
[2023-04-30 14:53:05] ]
[2023-04-30 14:53:05] 2023-04-30 18:51:35,703 | INFO     | [attempt=1/3] loading data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json
[2023-04-30 14:53:05] 2023-04-30 18:51:35,947 | WARNING  | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: 
[2023-04-30 14:53:05] 2023-04-30 18:51:35,947 | INFO     | will try again after 41s..
[2023-04-30 14:53:05] 2023-04-30 18:51:42,502 | INFO     | collecting machine features
[2023-04-30 14:53:05] 2023-04-30 18:51:42,502 | INFO     | machine features path does not exist (path="")
[2023-04-30 14:53:05] 2023-04-30 18:52:03,098 | INFO     | monitor loop #19: job 0:5836135238 is in state 'stageout'
[2023-04-30 14:53:05] 2023-04-30 18:52:03,098 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 779503 B
[2023-04-30 14:53:05] 2023-04-30 18:52:03,098 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 8859 B
[2023-04-30 14:53:05] 2023-04-30 18:52:03,098 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/26
[2023-04-30 14:53:05] 2023-04-30 18:52:03,130 | INFO     | sufficient remaining disk space (380424421376 B)
[2023-04-30 14:53:05] 2023-04-30 18:52:03,130 | INFO     | work directory size check will use 61362667520 B as a max limit (10% grace limit added)
[2023-04-30 14:53:05] 2023-04-30 18:52:03,131 | INFO     | size of work directory /var/lib/boinc-client/slots/26/PanDA_Pilot-5836135238: 1116595 B (within 61362667520 B limit)
[2023-04-30 14:53:05] 2023-04-30 18:52:03,131 | INFO     | pfn file=/var/lib/boinc-client/slots/26/PanDA_Pilot-5836135238/output.1.5c19ffa6-c707-4970-838f-579bace9ecca_23937.pool.root does not exist (skip from workdir size
[2023-04-30 14:53:05] 2023-04-30 18:52:03,131 | INFO     | total size of present files: 0 B (workdir size: 1116595 B)
[2023-04-30 14:53:05] 2023-04-30 18:52:03,131 | INFO     | output file size check: skipping output file /var/lib/boinc-client/slots/26/PanDA_Pilot-5836135238/output.1.5c19ffa6-c707-4970-838f-579bace9ecca_23937.pool.root si
[2023-04-30 14:53:05] 2023-04-30 18:52:03,209 | INFO     | number of running child processes to parent process 152752: 1
[2023-04-30 14:53:05] 2023-04-30 18:52:03,210 | INFO     | maximum number of monitored processes: 5
[2023-04-30 14:53:05] 2023-04-30 18:52:17,051 | INFO     | [attempt=2/3] loading data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json
[2023-04-30 14:53:05] 2023-04-30 18:52:17,398 | WARNING  | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: 
[2023-04-30 14:53:05] 2023-04-30 18:52:17,398 | INFO     | will try again after 27s..
[2023-04-30 14:53:05] 2023-04-30 18:52:42,653 | INFO     | collecting machine features
[2023-04-30 14:53:05] 2023-04-30 18:52:42,653 | INFO     | machine features path does not exist (path="")
[2023-04-30 14:53:05] 2023-04-30 18:52:44,498 | INFO     | [attempt=3/3] loading data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json
[2023-04-30 14:53:05] 2023-04-30 18:52:44,730 | WARNING  | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: 
[2023-04-30 14:53:05] 2023-04-30 18:52:44,730 | WARNING  | cache file=/var/lib/boinc-client/slots/26/agis_ddmendpoints.agis.ALL.json is not available: [Errno 2] No such file or directory: '/var/lib/boinc-client/slots/26/ag
[2023-04-30 14:53:05] 2023-04-30 18:52:44,779 | INFO     | transferring file 5c19ffa6-c707-4970-838f-579bace9ecca_23937.1.job.log.tgz from /var/lib/boinc-client/slots/26/PanDA_Pilot-5836135238/5c19ffa6-c707-4970-838f-579ba
[2023-04-30 14:53:05] 2023-04-30 18:52:44,779 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/26/PanDA_Pilot-5836135238/5c19ffa6-c707-4970-838f-579bace9ecca_23937.1.job.log.tgz /var/lib/boinc-cl
[2023-04-30 14:53:05] 2023-04-30 18:52:44,819 | INFO     | Adding to output.list: 5c19ffa6-c707-4970-838f-579bace9ecca_23937.1.job.log.tgz davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/63/63/5c19ffa6-c707-
[2023-04-30 14:53:05] 2023-04-30 18:52:44,819 | INFO     | executing command: ps aux -q 141328
[2023-04-30 14:53:05] 2023-04-30 18:52:44,846 | INFO     | summary of transferred files:
[2023-04-30 14:53:05] 2023-04-30 18:52:44,846 | INFO     |  -- lfn=5c19ffa6-c707-4970-838f-579bace9ecca_23937.1.job.log.tgz, status_code=0, status=transferred
[2023-04-30 14:53:05] 2023-04-30 18:52:44,847 | INFO     | stage-out finished correctly
[2023-04-30 14:53:05] 2023-04-30 18:52:47,829 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2023-04-30 14:53:05] 2023-04-30 18:52:48,222 | INFO     | job 5836135238 has state=finished
[2023-04-30 14:53:05] 2023-04-30 18:52:48,222 | INFO     | preparing for final server update for job 5836135238 in state='finished'
[2023-04-30 14:53:05] 2023-04-30 18:52:48,222 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2023-04-30 14:53:05] 2023-04-30 18:52:48,222 | INFO     | job 5836135238 has finished - writing final server update
[2023-04-30 14:53:05] 2023-04-30 18:52:48,222 | INFO     | collecting machine features
[2023-04-30 14:53:05] 2023-04-30 18:52:48,223 | INFO     | machine features path does not exist (path="")
[2023-04-30 14:53:05] 2023-04-30 18:52:48,223 | INFO     | collecting job features
[2023-04-30 14:53:05] 2023-04-30 18:52:48,223 | INFO     | job features path does not exist (path="")
[2023-04-30 14:53:05] 2023-04-30 18:52:48,223 | INFO     | fitting pss+swap vs Time
[2023-04-30 14:53:05] 2023-04-30 18:52:48,223 | INFO     | current memory leak: 1565.88 B/s (using 10 data points, chi2=0.04)
[2023-04-30 14:53:05] 2023-04-30 18:52:48,224 | INFO     | total number of processed events: 2 (read)
[2023-04-30 14:53:05] 2023-04-30 18:52:48,243 | INFO     | executing command: lscpu
[2023-04-30 14:53:05] 2023-04-30 18:52:48,260 | INFO     | found 16 cores (16 cores per socket, 1 sockets)
[2023-04-30 14:53:05] 2023-04-30 18:52:48,260 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2023-04-30 14:53:05] 2023-04-30 18:52:48,304 | INFO     | using path: /var/lib/boinc-client/slots/26/PanDA_Pilot-5836135238/memory_monitor_summary.json (trf name=prmon)
[2023-04-30 14:53:05] 2023-04-30 18:52:48,305 | INFO     | extracted standard info from prmon json
[2023-04-30 14:53:05] 2023-04-30 18:52:48,305 | INFO     | extracted standard memory fields from prmon json
[2023-04-30 14:53:05] 2023-04-30 18:52:48,306 | INFO     | ..............................
[2023-04-30 14:53:05] 2023-04-30 18:52:48,306 | INFO     | . Timing measurements:
[2023-04-30 14:53:05] 2023-04-30 18:52:48,306 | INFO     | . get job = 51 s
[2023-04-30 14:53:05] 2023-04-30 18:52:48,306 | INFO     | . initial setup = 81 s
[2023-04-30 14:53:05] 2023-04-30 18:52:48,306 | INFO     | . payload setup = 12 s
[2023-04-30 14:53:05] 2023-04-30 18:52:48,306 | INFO     | . stage-in = 88 s
[2023-04-30 14:53:05] 2023-04-30 18:52:48,306 | INFO     | . payload execution = 1019 s
[2023-04-30 14:53:05] 2023-04-30 18:52:48,306 | INFO     | . stage-out = 383 s
[2023-04-30 14:53:05] 2023-04-30 18:52:48,306 | INFO     | ..............................
[2023-04-30 14:53:05] 2023-04-30 18:52:48,365 | INFO     | 
[2023-04-30 14:53:05] 2023-04-30 18:52:48,366 | INFO     | job summary report
[2023-04-30 14:53:05] 2023-04-30 18:52:48,366 | INFO     | --------------------------------------------------
[2023-04-30 14:53:05] 2023-04-30 18:52:48,366 | INFO     | PanDA job id: 5836135238
[2023-04-30 14:53:05] 2023-04-30 18:52:48,366 | INFO     | task id: NULL
[2023-04-30 14:53:05] 2023-04-30 18:52:48,366 | INFO     | errors: (none)
[2023-04-30 14:53:05] 2023-04-30 18:52:48,366 | INFO     | status: LOG_TRANSFER = DONE 
[2023-04-30 14:53:05] 2023-04-30 18:52:48,366 | INFO     | pilot state: finished 
[2023-04-30 14:53:05] 2023-04-30 18:52:48,366 | INFO     | transexitcode: 0
[2023-04-30 14:53:05] 2023-04-30 18:52:48,366 | INFO     | exeerrorcode: 0
[2023-04-30 14:53:05] 2023-04-30 18:52:48,366 | INFO     | exeerrordiag: 
[2023-04-30 14:53:05] 2023-04-30 18:52:48,366 | INFO     | exitcode: 0
[2023-04-30 14:53:05] 2023-04-30 18:52:48,366 | INFO     | exitmsg: OK
[2023-04-30 14:53:05] 2023-04-30 18:52:48,366 | INFO     | cpuconsumptiontime: 559 s
[2023-04-30 14:53:05] 2023-04-30 18:52:48,366 | INFO     | nevents: 2
[2023-04-30 14:53:05] 2023-04-30 18:52:48,366 | INFO     | neventsw: 0
[2023-04-30 14:53:05] 2023-04-30 18:52:48,366 | INFO     | pid: 152752
[2023-04-30 14:53:05] 2023-04-30 18:52:48,366 | INFO     | pgrp: 152752
[2023-04-30 14:53:05] 2023-04-30 18:52:48,366 | INFO     | corecount: 1
[2023-04-30 14:53:05] 2023-04-30 18:52:48,367 | INFO     | event service: False
[2023-04-30 14:53:05] 2023-04-30 18:52:48,367 | INFO     | sizes: {0: 2577798, 1: 2578199, 12: 2578199, 22: 2578227, 33: 2578255, 44: 2578283, 54: 2578439, 65: 2578467, 75: 2578495, 86: 2578523, 89: 2578611, 97: 2578919, 1
[2023-04-30 14:53:05] 2023-04-30 18:52:48,367 | INFO     | --------------------------------------------------
[2023-04-30 14:53:05] 2023-04-30 18:52:48,367 | INFO     | 
[2023-04-30 14:53:05] 2023-04-30 18:52:48,367 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/26
[2023-04-30 14:53:05] 2023-04-30 18:52:48,395 | INFO     | queue jobs had 0 job(s) [purged]
[2023-04-30 14:53:05] 2023-04-30 18:52:48,395 | INFO     | queue payloads had 0 job(s) [purged]
[2023-04-30 14:53:05] 2023-04-30 18:52:48,395 | INFO     | queue data_in had 0 job(s) [purged]
[2023-04-30 14:53:05] 2023-04-30 18:52:48,395 | INFO     | queue data_out had 0 job(s) [purged]
[2023-04-30 14:53:05] 2023-04-30 18:52:48,395 | INFO     | queue current_data_in had 0 job(s) [purged]
[2023-04-30 14:53:05] 2023-04-30 18:52:48,395 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2023-04-30 14:53:05] 2023-04-30 18:52:48,395 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2023-04-30 14:53:05] 2023-04-30 18:52:48,395 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2023-04-30 14:53:05] 2023-04-30 18:52:48,395 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2023-04-30 14:53:05] 2023-04-30 18:52:48,396 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2023-04-30 14:53:05] 2023-04-30 18:52:48,396 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2023-04-30 14:53:05] 2023-04-30 18:52:48,396 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2023-04-30 14:53:05] 2023-04-30 18:52:48,396 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2023-04-30 14:53:05] 2023-04-30 18:52:48,396 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2023-04-30 14:53:05] 2023-04-30 18:52:48,396 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2023-04-30 14:53:05] 2023-04-30 18:52:48,396 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2023-04-30 14:53:05] 2023-04-30 18:52:48,396 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2023-04-30 14:53:05] 2023-04-30 18:52:48,396 | INFO     | queue completed_jobids has 1 job(s)
[2023-04-30 14:53:05] 2023-04-30 18:52:48,396 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2023-04-30 14:53:05] 2023-04-30 18:52:48,396 | INFO     | queue messages had 0 job(s) [purged]
[2023-04-30 14:53:05] 2023-04-30 18:52:48,396 | INFO     | job 5836135238 has completed (purged errors)
[2023-04-30 14:53:05] 2023-04-30 18:52:48,396 | INFO     | overall cleanup function is called
[2023-04-30 14:53:05] 2023-04-30 18:52:49,403 | INFO     | --- collectZombieJob: --- 10, [152752]
[2023-04-30 14:53:05] 2023-04-30 18:52:49,403 | INFO     | zombie collector trying to kill pid 152752
[2023-04-30 14:53:05] 2023-04-30 18:52:49,403 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2023-04-30 14:53:05] 2023-04-30 18:52:50,405 | INFO     | collected zombie processes
[2023-04-30 14:53:05] 2023-04-30 18:52:50,406 | INFO     | will now attempt to kill all subprocesses of pid=152752
[2023-04-30 14:53:05] 2023-04-30 18:52:50,487 | INFO     | process IDs to be killed: [152752] (in reverse order)
[2023-04-30 14:53:05] 2023-04-30 18:52:50,561 | WARNING  | found no corresponding commands to process id(s)
[2023-04-30 14:53:05] 2023-04-30 18:52:50,562 | INFO     | Do not look for orphan processes in BOINC jobs
[2023-04-30 14:53:05] 2023-04-30 18:52:50,562 | INFO     | ready for new job
[2023-04-30 14:53:05] 2023-04-30 18:52:50,562 | INFO     | pilot has finished with previous job - re-establishing logging
[2023-04-30 14:53:05] 2023-04-30 18:52:50,562 | INFO     | ****************************************
[2023-04-30 14:53:05] 2023-04-30 18:52:50,562 | INFO     | ***  PanDA Pilot version 3.5.1 (17)  ***
[2023-04-30 14:53:05] 2023-04-30 18:52:50,562 | INFO     | ****************************************
[2023-04-30 14:53:05] 2023-04-30 18:52:50,562 | INFO     | 
[2023-04-30 14:53:05] 2023-04-30 18:52:50,587 | INFO     | architecture information:
[2023-04-30 14:53:05] 2023-04-30 18:52:50,699 | INFO     | 
[2023-04-30 14:53:05] LSB Version:	:core-4.1-amd64:core-4.1-noarch
[2023-04-30 14:53:05] Distributor ID:	CentOS
[2023-04-30 14:53:05] Description:	CentOS Linux release 7.9.2009 (Core)
[2023-04-30 14:53:05] Release:	7.9.2009
[2023-04-30 14:53:05] Codename:	Core
[2023-04-30 14:53:05] 2023-04-30 18:52:50,699 | INFO     | ****************************************
[2023-04-30 14:53:05] 2023-04-30 18:52:51,202 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/26
[2023-04-30 14:53:05] 2023-04-30 18:52:51,217 | INFO     | sufficient remaining disk space (380424421376 B)
[2023-04-30 14:53:05] 2023-04-30 18:52:51,217 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2023-04-30 14:53:05] 2023-04-30 18:52:51,217 | INFO     | [job] retrieve thread has finished
[2023-04-30 14:53:05] 2023-04-30 18:52:51,217 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2023-04-30 14:53:05] 2023-04-30 18:52:51,285 | INFO     | [payload] failed_post thread has finished
[2023-04-30 14:53:05] 2023-04-30 18:52:51,663 | INFO     | [payload] execute_payloads thread has finished
[2023-04-30 14:53:05] 2023-04-30 18:52:51,683 | INFO     | [monitor] control thread has ended
[2023-04-30 14:53:05] 2023-04-30 18:52:51,880 | INFO     | [data] control thread has finished
[2023-04-30 14:53:05] 2023-04-30 18:52:51,904 | INFO     | [job] validate thread has finished
[2023-04-30 14:53:05] 2023-04-30 18:52:52,216 | INFO     | [data] copytool_in thread has finished
[2023-04-30 14:53:05] 2023-04-30 18:52:52,218 | INFO     | [data] copytool_out thread has finished
[2023-04-30 14:53:05] 2023-04-30 18:52:52,262 | INFO     | [payload] validate_post thread has finished
[2023-04-30 14:53:05] 2023-04-30 18:52:52,277 | INFO     | [job] create_data_payload thread has finished
[2023-04-30 14:53:05] 2023-04-30 18:52:52,386 | INFO     | [payload] control thread has finished
[2023-04-30 14:53:05] 2023-04-30 18:52:52,541 | INFO     | [payload] validate_pre thread has finished
[2023-04-30 14:53:05] 2023-04-30 18:52:52,792 | INFO     | [job] control thread has finished
[2023-04-30 14:53:05] 2023-04-30 18:52:53,374 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2023-04-30 14:53:05] 2023-04-30 18:52:53,374 | INFO     | [job] queue monitor thread has finished
[2023-04-30 14:53:05] 2023-04-30 18:52:53,966 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2023-04-30 14:53:05] 2023-04-30 18:52:56,967 | INFO     | [data] queue_monitor thread has finished
[2023-04-30 14:53:05] 2023-04-30 18:53:02,242 | INFO     | job.realtimelogging is not enabled
[2023-04-30 14:53:05] 2023-04-30 18:53:02,242 | INFO     | [payload] run_realtimelog thread has finished
[2023-04-30 14:53:05] 2023-04-30 18:53:04,818 | WARNING  | no jobs in monitored_payloads queue (waited for 61 s)
[2023-04-30 14:53:05] 2023-04-30 18:53:04,818 | INFO     | [job] job monitor thread has finished
[2023-04-30 14:53:05] 2023-04-30 18:53:05,230 | INFO     | end of generic workflow (traces error code: 0)
[2023-04-30 14:53:05] 2023-04-30 18:53:05,230 | INFO     | traces error code: 0
[2023-04-30 14:53:05] 2023-04-30 18:53:05,230 | INFO     | pilot has finished
[2023-04-30 14:53:05] 2023-04-30 18:53:05,270 [wrapper] ==== pilot stdout END ====
[2023-04-30 14:53:05] 2023-04-30 18:53:05,272 [wrapper] ==== wrapper stdout RESUME ====
[2023-04-30 14:53:05] 2023-04-30 18:53:05,277 [wrapper] pilotpid: 141328
[2023-04-30 14:53:05] 2023-04-30 18:53:05,279 [wrapper] Pilot exit status: 0
[2023-04-30 14:53:05] 2023-04-30 18:53:05,299 [wrapper] pandaids: 5836135238
[2023-04-30 14:53:05] 2023-04-30 18:53:05,323 [wrapper] apfmon messages muted
[2023-04-30 14:53:05] 2023-04-30 18:53:05,326 [wrapper] Test setup, not cleaning
[2023-04-30 14:53:05] 2023-04-30 18:53:05,332 [wrapper] ==== wrapper stdout END ====
[2023-04-30 14:53:05] 2023-04-30 18:53:05,335 [wrapper] ==== wrapper stderr END ====
[2023-04-30 14:53:05] 2023-04-30 18:53:05,356 [wrapper] wrapperexiting ec=0, duration=1681
[2023-04-30 14:53:05] 2023-04-30 18:53:05,363 [wrapper] apfmon messages muted
[2023-04-30 14:53:05]  *** Error codes and diagnostics ***
[2023-04-30 14:53:05]     "exeErrorCode": 0,
[2023-04-30 14:53:05]     "exeErrorDiag": "",
[2023-04-30 14:53:05]     "pilotErrorCode": 0,
[2023-04-30 14:53:05]     "pilotErrorDiag": "",
[2023-04-30 14:53:05]  *** Listing of results directory ***
[2023-04-30 14:53:05] total 44716
[2023-04-30 14:53:05] -rw-r--r-- 1 boinc boinc   393247 Apr 30 13:41 pilot3.tar.gz
[2023-04-30 14:53:05] -rw-r--r-- 1 boinc boinc     4388 Apr 30 14:02 queuedata.json
[2023-04-30 14:53:05] -rwx------ 1 boinc boinc    27542 Apr 30 14:04 runpilot2-wrapper.sh
[2023-04-30 14:53:05] -rw-r--r-- 1 boinc boinc      107 Apr 30 14:25 wrapper_26015_x86_64-pc-linux-gnu
[2023-04-30 14:53:05] -rwxr-xr-x 1 boinc boinc     7986 Apr 30 14:25 run_atlas
[2023-04-30 14:53:05] -rw-r--r-- 1 boinc boinc      112 Apr 30 14:25 job.xml
[2023-04-30 14:53:05] -rw-r--r-- 2 boinc boinc    17604 Apr 30 14:25 start_atlas.sh
[2023-04-30 14:53:05] drwxrwx--x 2 boinc boinc     4096 Apr 30 14:25 shared
[2023-04-30 14:53:05] -rw-r--r-- 2 boinc boinc   403679 Apr 30 14:25 input.tar.gz
[2023-04-30 14:53:05] -rw-r--r-- 1 boinc boinc     9507 Apr 30 14:25 init_data.xml
[2023-04-30 14:53:05] -rw-r--r-- 2 boinc boinc 37658468 Apr 30 14:25 EVNT.04972714._000029.pool.root.1
[2023-04-30 14:53:05] -rw-r--r-- 1 boinc boinc        0 Apr 30 14:25 boinc_lockfile
[2023-04-30 14:53:05] -rw-r--r-- 1 boinc boinc     2755 Apr 30 14:25 pandaJob.out
[2023-04-30 14:53:05] -rw------- 1 boinc boinc      424 Apr 30 14:25 setup.sh.local
[2023-04-30 14:53:05] -rw------- 1 boinc boinc  1446236 Apr 30 14:26 cric_ddmendpoints.json
[2023-04-30 14:53:05] -rw------- 1 boinc boinc  1013048 Apr 30 14:26 agis_schedconf.cvmfs.json
[2023-04-30 14:53:05] drwx------ 4 boinc boinc     4096 Apr 30 14:27 pilot3
[2023-04-30 14:53:05] -rw------- 1 boinc boinc  2043634 Apr 30 14:46 output.1.5c19ffa6-c707-4970-838f-579bace9ecca_23937.pool.root
[2023-04-30 14:53:05] -rw-r--r-- 1 boinc boinc      534 Apr 30 14:46 boinc_task_state.xml
[2023-04-30 14:53:05] -rw------- 1 boinc boinc     1008 Apr 30 14:46 memory_monitor_summary.json
[2023-04-30 14:53:05] -rw------- 1 boinc boinc   155318 Apr 30 14:49 5c19ffa6-c707-4970-838f-579bace9ecca_23937.1.job.log.tgz
[2023-04-30 14:53:05] -rw------- 1 boinc boinc     6578 Apr 30 14:52 heartbeat.json
[2023-04-30 14:53:05] -rw-r--r-- 1 boinc boinc     8192 Apr 30 14:53 boinc_mmap_file
[2023-04-30 14:53:05] -rw-r--r-- 1 boinc boinc       25 Apr 30 14:53 wrapper_checkpoint.txt
[2023-04-30 14:53:05] -rw------- 1 boinc boinc     2879 Apr 30 14:53 pilotlog.txt
[2023-04-30 14:53:05] -rw------- 1 boinc boinc   123613 Apr 30 14:53 5c19ffa6-c707-4970-838f-579bace9ecca_23937.1.job.log
[2023-04-30 14:53:05] -rw------- 1 boinc boinc      464 Apr 30 14:53 output.list
[2023-04-30 14:53:05] -rw-r--r-- 1 boinc boinc      748 Apr 30 14:53 runtime_log
[2023-04-30 14:53:05] -rw------- 1 boinc boinc  2344960 Apr 30 14:53 result.tar.gz
[2023-04-30 14:53:05] -rw------- 1 boinc boinc      625 Apr 30 14:53 zPkLDmfaQD3n7Olcko1bjSoqABFKDmABFKDm7AsVDmkYIKDmaf8mhn.diag
[2023-04-30 14:53:05] -rw-r--r-- 1 boinc boinc    11954 Apr 30 14:53 runtime_log.err
[2023-04-30 14:53:05] -rw-r--r-- 1 boinc boinc    22546 Apr 30 14:53 stderr.txt
[2023-04-30 14:53:05] HITS file was successfully produced:
[2023-04-30 14:53:05] -rw------- 1 boinc boinc 2043634 Apr 30 14:46 shared/HITS.pool.root.1
[2023-04-30 14:53:05]  *** Contents of shared directory: ***
[2023-04-30 14:53:05] total 41480
[2023-04-30 14:53:05] -rw-r--r-- 2 boinc boinc    17604 Apr 30 14:25 start_atlas.sh
[2023-04-30 14:53:05] -rw-r--r-- 2 boinc boinc   403679 Apr 30 14:25 input.tar.gz
[2023-04-30 14:53:05] -rw-r--r-- 2 boinc boinc 37658468 Apr 30 14:25 ATLAS.root_0
[2023-04-30 14:53:05] -rw------- 1 boinc boinc  2043634 Apr 30 14:46 HITS.pool.root.1
[2023-04-30 14:53:05] -rw------- 1 boinc boinc  2344960 Apr 30 14:53 result.tar.gz
14:53:07 (137351): run_atlas exited; CPU time 550.666894
14:53:07 (137351): called boinc_finish(0)

</stderr_txt>
]]>

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