Name | emuNDmpVXD3n7Olcko1bjSoqABFKDmABFKDm7AsVDmJaIKDmh7Ewmm_0 |
Workunit | 2303870 |
Created | 1 May 2023, 1:28:06 UTC |
Sent | 1 May 2023, 1:29:39 UTC |
Report deadline | 8 May 2023, 1:29:39 UTC |
Received | 1 May 2023, 2:02:43 UTC |
Server state | Over |
Outcome | Success |
Client state | Done |
Exit status | 0 (0x00000000) |
Computer ID | 1498 |
Run time | 30 min 47 sec |
CPU time | 15 min 57 sec |
Validate state | Valid |
Credit | 17.97 |
Device peak FLOPS | 9.74 GFLOPS |
Application version | ATLAS Simulation v3.01 (native_mt) x86_64-pc-linux-gnu |
Peak working set size | 1.52 GB |
Peak swap size | 2.12 GB |
Peak disk usage | 81.38 MB |
<core_client_version>7.4.25</core_client_version> <![CDATA[ <stderr_txt> 02:30:43 (30702): wrapper (7.7.26015): starting 02:30:43 (30702): wrapper: running run_atlas (--nthreads 3) [2023-05-01 02:30:43] Arguments: --nthreads 3 [2023-05-01 02:30:43] Threads: 3 [2023-05-01 02:30:43] Checking for CVMFS [2023-05-01 02:30:43] Probing /cvmfs/atlas.cern.ch... OK [2023-05-01 02:30:44] Probing /cvmfs/atlas-condb.cern.ch... OK [2023-05-01 02:30:44] Running cvmfs_config stat atlas.cern.ch [2023-05-01 02:30:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE [2023-05-01 02:30:44] 2.9.0.0 2870 64 44020 118477 3 58 3641344 4194305 0 130560 0 91564 98.203 217931 441 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.100.152:3128 1 [2023-05-01 02:30:44] CVMFS is ok [2023-05-01 02:30:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 [2023-05-01 02:30:44] Checking for apptainer binary... [2023-05-01 02:30:44] Using apptainer found in PATH at /usr/bin/apptainer [2023-05-01 02:30:44] Running /usr/bin/apptainer --version [2023-05-01 02:30:44] apptainer version 1.0.3 [2023-05-01 02:30:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname [2023-05-01 02:30:45] TeeC16 [2023-05-01 02:30:45] apptainer works [2023-05-01 02:30:45] Set ATHENA_PROC_NUMBER=3 [2023-05-01 02:30:45] Set ATHENA_CORE_NUMBER=3 [2023-05-01 02:30:45] Starting ATLAS job with PandaID=5836329109 [2023-05-01 02:30:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/m/BOINC/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh [2023-05-01 03:01:27] *** The last 200 lines of the pilot log: *** [2023-05-01 03:01:27] 2023-05-01 02:01:13,433 | DEBUG | pilot.user.atlas.utilities | get_memory_monitor_info | summary_dictionary={'Avg': {'nprocs': 4.857, 'nthreads': 5.761, 'pss': 1307075.0, 'rchar': 49517964. [2023-05-01 03:01:27] 2023-05-01 02:01:13,433 | INFO | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard info from prmon json [2023-05-01 03:01:27] 2023-05-01 02:01:13,433 | INFO | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard memory fields from prmon json [2023-05-01 03:01:27] 2023-05-01 02:01:13,433 | INFO | pilot.util.timing | timing_report | .............................. [2023-05-01 03:01:27] 2023-05-01 02:01:13,433 | INFO | pilot.util.timing | timing_report | . Timing measurements: [2023-05-01 03:01:27] 2023-05-01 02:01:13,433 | INFO | pilot.util.timing | timing_report | . get job = 63 s [2023-05-01 03:01:27] 2023-05-01 02:01:13,433 | INFO | pilot.util.timing | timing_report | . initial setup = 45 s [2023-05-01 03:01:27] 2023-05-01 02:01:13,433 | INFO | pilot.util.timing | timing_report | . payload setup = 45 s [2023-05-01 03:01:27] 2023-05-01 02:01:13,434 | INFO | pilot.util.timing | timing_report | . stage-in = 43 s [2023-05-01 03:01:27] 2023-05-01 02:01:13,434 | INFO | pilot.util.timing | timing_report | . payload execution = 1227 s [2023-05-01 03:01:27] 2023-05-01 02:01:13,434 | INFO | pilot.util.timing | timing_report | . stage-out = 361 s [2023-05-01 03:01:27] 2023-05-01 02:01:13,434 | INFO | pilot.util.timing | timing_report | .............................. [2023-05-01 03:01:27] 2023-05-01 02:01:13,434 | DEBUG | pilot.control.job | send_state | data={'jobId': '5836329109', 'state': 'finished', 'timestamp': '2023-05-01T03:01:04+00:00', 'siteNam [2023-05-01 03:01:27] 2023-05-01 02:01:13,435 | DEBUG | pilot.control.job | write_heartbeat_to_file | heartbeat dictionary: {'jobId': '5836329109', 'state': 'finished', 'timestamp': '2023-05-01T03:01:04 [2023-05-01 03:01:27] 2023-05-01 02:01:13,435 | DEBUG | pilot.control.job | write_heartbeat_to_file | wrote heartbeat to file: /home/m/BOINC/slots/2/heartbeat.json [2023-05-01 03:01:27] 2023-05-01 02:01:13,527 | INFO | pilot.control.job | make_job_report | [2023-05-01 03:01:27] 2023-05-01 02:01:13,527 | INFO | pilot.control.job | make_job_report | job summary report [2023-05-01 03:01:27] 2023-05-01 02:01:13,527 | INFO | pilot.control.job | make_job_report | -------------------------------------------------- [2023-05-01 03:01:27] 2023-05-01 02:01:13,528 | INFO | pilot.control.job | make_job_report | PanDA job id: 5836329109 [2023-05-01 03:01:27] 2023-05-01 02:01:13,528 | INFO | pilot.control.job | make_job_report | task id: NULL [2023-05-01 03:01:27] 2023-05-01 02:01:13,528 | INFO | pilot.control.job | make_job_report | errors: (none) [2023-05-01 03:01:27] 2023-05-01 02:01:13,528 | INFO | pilot.control.job | make_job_report | status: LOG_TRANSFER = DONE [2023-05-01 03:01:27] 2023-05-01 02:01:13,528 | INFO | pilot.control.job | make_job_report | pilot state: finished [2023-05-01 03:01:27] 2023-05-01 02:01:13,528 | INFO | pilot.control.job | make_job_report | transexitcode: 0 [2023-05-01 03:01:27] 2023-05-01 02:01:13,528 | INFO | pilot.control.job | make_job_report | exeerrorcode: 0 [2023-05-01 03:01:27] 2023-05-01 02:01:13,528 | INFO | pilot.control.job | make_job_report | exeerrordiag: [2023-05-01 03:01:27] 2023-05-01 02:01:13,528 | INFO | pilot.control.job | make_job_report | exitcode: 0 [2023-05-01 03:01:27] 2023-05-01 02:01:13,528 | INFO | pilot.control.job | make_job_report | exitmsg: OK [2023-05-01 03:01:27] 2023-05-01 02:01:13,528 | INFO | pilot.control.job | make_job_report | cpuconsumptiontime: 960 s [2023-05-01 03:01:27] 2023-05-01 02:01:13,528 | INFO | pilot.control.job | make_job_report | nevents: 2 [2023-05-01 03:01:27] 2023-05-01 02:01:13,528 | INFO | pilot.control.job | make_job_report | neventsw: 0 [2023-05-01 03:01:27] 2023-05-01 02:01:13,528 | INFO | pilot.control.job | make_job_report | pid: 9538 [2023-05-01 03:01:27] 2023-05-01 02:01:13,529 | INFO | pilot.control.job | make_job_report | pgrp: 9538 [2023-05-01 03:01:27] 2023-05-01 02:01:13,529 | INFO | pilot.control.job | make_job_report | corecount: 3 [2023-05-01 03:01:27] 2023-05-01 02:01:13,529 | INFO | pilot.control.job | make_job_report | event service: False [2023-05-01 03:01:27] 2023-05-01 02:01:13,529 | INFO | pilot.control.job | make_job_report | sizes: {0: 2578677, 1: 2578876, 11: 2579022, 22: 2579050, 33: 2579078, 43: 2579106, 48: 2579322, 54: [2023-05-01 03:01:27] 2023-05-01 02:01:13,529 | INFO | pilot.control.job | make_job_report | -------------------------------------------------- [2023-05-01 03:01:27] 2023-05-01 02:01:13,529 | INFO | pilot.control.job | make_job_report | [2023-05-01 03:01:27] 2023-05-01 02:01:13,529 | DEBUG | pilot.control.job | has_job_completed | ls -lF /home/m/BOINC/slots/2: [2023-05-01 03:01:27] [2023-05-01 03:01:27] 2023-05-01 02:01:13,529 | INFO | pilot.util.container | print_executable | executing command: ls -lF /home/m/BOINC/slots/2 [2023-05-01 03:01:27] 2023-05-01 02:01:13,544 | DEBUG | pilot.control.job | has_job_completed | total 44044 [2023-05-01 03:01:27] -rw-r--r-- 2 m m 38217911 May 1 02:30 EVNT.04972714._000030.pool.root.1 [2023-05-01 03:01:27] drwxrwx--- 2 m m 4096 May 1 03:01 PanDA_Pilot-5836329109/ [2023-05-01 03:01:27] -rw------- 1 m m 1013424 May 1 02:30 agis_schedconf.cvmfs.json [2023-05-01 03:01:27] -rw-rw-r-- 1 m m 0 May 1 02:30 boinc_lockfile [2023-05-01 03:01:27] -rw-rw-r-- 1 m m 8192 May 1 03:00 boinc_mmap_file [2023-05-01 03:01:27] -rw-rw-r-- 1 m m 533 May 1 02:55 boinc_task_state.xml [2023-05-01 03:01:27] -rw------- 1 m m 1446236 May 1 02:31 cric_ddmendpoints.json [2023-05-01 03:01:27] -rw------- 1 m m 294984 May 1 03:01 e8c31bee-87ba-43db-b151-c60132f7bfed_80890.1.job.log [2023-05-01 03:01:27] -rw------- 1 m m 169690 May 1 02:57 e8c31bee-87ba-43db-b151-c60132f7bfed_80890.1.job.log.tgz [2023-05-01 03:01:27] -rw------- 1 m m 129 May 1 02:30 emuNDmpVXD3n7Olcko1bjSoqABFKDmABFKDm7AsVDmJaIKDmh7Ewmm.diag [2023-05-01 03:01:27] -rw------- 1 m m 7345 May 1 03:01 heartbeat.json [2023-05-01 03:01:27] -rw-rw-r-- 1 m m 5708 May 1 02:30 init_data.xml [2023-05-01 03:01:27] -rw-r--r-- 2 m m 425368 May 1 02:30 input.tar.gz [2023-05-01 03:01:27] -rw-rw-r-- 1 m m 112 May 1 02:30 job.xml [2023-05-01 03:01:27] -rw------- 1 m m 1019 May 1 02:54 memory_monitor_summary.json [2023-05-01 03:01:27] -rw------- 1 m m 2662060 May 1 02:54 output.1.e8c31bee-87ba-43db-b151-c60132f7bfed_80890.pool.root [2023-05-01 03:01:27] -rw------- 1 m m 464 May 1 03:01 output.list [2023-05-01 03:01:27] -rw-rw-r-- 1 m m 2662 May 1 02:30 pandaJob.out [2023-05-01 03:01:27] drwx------ 4 m m 4096 May 1 02:32 pilot3/ [2023-05-01 03:01:27] -rw------- 1 m m 413524 May 1 02:28 pilot3.tar.gz [2023-05-01 03:01:27] -rw------- 1 m m 281293 May 1 03:01 pilotlog.txt [2023-05-01 03:01:27] -rw-r--r-- 1 m m 4388 May 1 02:26 queuedata.json [2023-05-01 03:01:27] -rwxr-xr-x 1 m m 7986 May 1 02:30 run_atlas* [2023-05-01 03:01:27] -rwx------ 1 m m 27540 May 1 02:28 runpilot2-wrapper.sh* [2023-05-01 03:01:27] -rw-rw-r-- 1 m m 407 May 1 02:30 runtime_log [2023-05-01 03:01:27] -rw-rw-r-- 1 m m 7699 May 1 02:30 runtime_log.err [2023-05-01 03:01:27] -rw------- 1 m m 424 May 1 02:30 setup.sh.local [2023-05-01 03:01:27] drwxrwx--x 2 m m 4096 May 1 02:30 shared/ [2023-05-01 03:01:27] -rw-r--r-- 2 m m 17632 May 1 02:30 start_atlas.sh [2023-05-01 03:01:27] -rw-rw-r-- 1 m m 1727 May 1 02:30 stderr.txt [2023-05-01 03:01:27] -rw-rw-r-- 1 m m 107 May 1 02:30 wrapper_26015_x86_64-pc-linux-gnu [2023-05-01 03:01:27] -rw-rw-r-- 1 m m 25 May 1 03:00 wrapper_checkpoint.txt [2023-05-01 03:01:27] 2023-05-01 02:01:13,544 | INFO | pilot.util.queuehandling | queue_report | queue jobs had 0 job(s) [purged] [2023-05-01 03:01:27] 2023-05-01 02:01:13,545 | INFO | pilot.util.queuehandling | queue_report | queue payloads had 0 job(s) [purged] [2023-05-01 03:01:27] 2023-05-01 02:01:13,545 | INFO | pilot.util.queuehandling | queue_report | queue data_in had 0 job(s) [purged] [2023-05-01 03:01:27] 2023-05-01 02:01:13,545 | INFO | pilot.util.queuehandling | queue_report | queue data_out had 0 job(s) [purged] [2023-05-01 03:01:27] 2023-05-01 02:01:13,545 | INFO | pilot.util.queuehandling | queue_report | queue current_data_in had 0 job(s) [purged] [2023-05-01 03:01:27] 2023-05-01 02:01:13,545 | INFO | pilot.util.queuehandling | queue_report | queue validated_jobs had 0 job(s) [purged] [2023-05-01 03:01:27] 2023-05-01 02:01:13,545 | INFO | pilot.util.queuehandling | queue_report | queue validated_payloads had 0 job(s) [purged] [2023-05-01 03:01:27] 2023-05-01 02:01:13,545 | INFO | pilot.util.queuehandling | queue_report | queue monitored_payloads had 0 job(s) [purged] [2023-05-01 03:01:27] 2023-05-01 02:01:13,545 | INFO | pilot.util.queuehandling | queue_report | queue finished_jobs had 0 job(s) [purged] [2023-05-01 03:01:27] 2023-05-01 02:01:13,545 | INFO | pilot.util.queuehandling | queue_report | queue finished_payloads had 0 job(s) [purged] [2023-05-01 03:01:27] 2023-05-01 02:01:13,546 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_in had 1 job(s) [purged] [2023-05-01 03:01:27] 2023-05-01 02:01:13,546 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_out had 0 job(s) [purged] [2023-05-01 03:01:27] 2023-05-01 02:01:13,546 | INFO | pilot.util.queuehandling | queue_report | queue failed_jobs had 0 job(s) [purged] [2023-05-01 03:01:27] 2023-05-01 02:01:13,546 | INFO | pilot.util.queuehandling | queue_report | queue failed_payloads had 0 job(s) [purged] [2023-05-01 03:01:27] 2023-05-01 02:01:13,546 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_in had 0 job(s) [purged] [2023-05-01 03:01:27] 2023-05-01 02:01:13,546 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_out had 0 job(s) [purged] [2023-05-01 03:01:27] 2023-05-01 02:01:13,546 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobs had 0 job(s) [purged] [2023-05-01 03:01:27] 2023-05-01 02:01:13,546 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobids has 1 job(s) [2023-05-01 03:01:27] 2023-05-01 02:01:13,546 | INFO | pilot.util.queuehandling | queue_report | queue realtimelog_payloads had 0 job(s) [purged] [2023-05-01 03:01:27] 2023-05-01 02:01:13,546 | INFO | pilot.util.queuehandling | queue_report | queue messages had 0 job(s) [purged] [2023-05-01 03:01:27] 2023-05-01 02:01:13,547 | INFO | pilot.control.job | has_job_completed | job 5836329109 has completed (purged errors) [2023-05-01 03:01:27] 2023-05-01 02:01:13,547 | DEBUG | pilot.util.realtimelogger | cleanup | attempting real-time logger cleanup [2023-05-01 03:01:27] 2023-05-01 02:01:13,547 | INFO | pilot.util.processes | cleanup | overall cleanup function is called [2023-05-01 03:01:27] 2023-05-01 02:01:13,549 | DEBUG | pilot.util.processes | cleanup | work directory was removed: /home/m/BOINC/slots/2/PanDA_Pilot-5836329109 [2023-05-01 03:01:27] 2023-05-01 02:01:13,556 | WARNING | pilot.control.job | check_job_monitor_waiting_time | no jobs in monitored_payloads queue (waited for 62 s) [2023-05-01 03:01:27] 2023-05-01 02:01:14,553 | INFO | pilot.info.jobdata | collect_zombies | --- collectZombieJob: --- 10, [9538] [2023-05-01 03:01:27] 2023-05-01 02:01:14,554 | INFO | pilot.info.jobdata | collect_zombies | zombie collector trying to kill pid 9538 [2023-05-01 03:01:27] 2023-05-01 02:01:14,554 | INFO | pilot.info.jobdata | collect_zombies | harmless exception when collecting zombies: [Errno 10] No child processes [2023-05-01 03:01:27] 2023-05-01 02:01:15,556 | INFO | pilot.util.processes | cleanup | collected zombie processes [2023-05-01 03:01:27] 2023-05-01 02:01:15,557 | INFO | pilot.util.processes | cleanup | will now attempt to kill all subprocesses of pid=9538 [2023-05-01 03:01:27] 2023-05-01 02:01:15,597 | INFO | pilot.util.processes | kill_processes | process IDs to be killed: [9538] (in reverse order) [2023-05-01 03:01:27] 2023-05-01 02:01:15,634 | WARNING | pilot.util.processes | kill_processes | found no corresponding commands to process id(s) [2023-05-01 03:01:27] 2023-05-01 02:01:15,634 | INFO | pilot.util.processes | kill_orphans | Do not look for orphan processes in BOINC jobs [2023-05-01 03:01:27] 2023-05-01 02:01:15,635 | DEBUG | pilot.util.queuehandling | purge_queue | queue purged [2023-05-01 03:01:27] 2023-05-01 02:01:15,635 | INFO | pilot.control.job | retrieve | ready for new job [2023-05-01 03:01:27] 2023-05-01 02:01:15,635 | INFO | root | retrieve | pilot has finished with previous job - re-establishing logging [2023-05-01 03:01:27] 2023-05-01 02:01:15,636 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************** [2023-05-01 03:01:27] 2023-05-01 02:01:15,636 | INFO | pilot.util.auxiliary | pilot_version_banner | *** PanDA Pilot version 3.6.0 (68) *** [2023-05-01 03:01:27] 2023-05-01 02:01:15,636 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************** [2023-05-01 03:01:27] 2023-05-01 02:01:15,636 | INFO | pilot.util.auxiliary | pilot_version_banner | [2023-05-01 03:01:27] 2023-05-01 02:01:15,656 | INFO | pilot.util.auxiliary | display_architecture_info | architecture information: [2023-05-01 03:01:27] 2023-05-01 02:01:15,657 | INFO | pilot.util.container | print_executable | executing command: cat /etc/os-release [2023-05-01 03:01:27] 2023-05-01 02:01:15,669 | INFO | pilot.util.filehandling | dump | cat /etc/os-release: [2023-05-01 03:01:27] NAME="CentOS Linux" [2023-05-01 03:01:27] VERSION="7 (Core)" [2023-05-01 03:01:27] ID="centos" [2023-05-01 03:01:27] ID_LIKE="rhel fedora" [2023-05-01 03:01:27] VERSION_ID="7" [2023-05-01 03:01:27] PRETTY_NAME="CentOS Linux 7 (Core)" [2023-05-01 03:01:27] ANSI_COLOR="0;31" [2023-05-01 03:01:27] CPE_NAME="cpe:/o:centos:centos:7" [2023-05-01 03:01:27] HOME_URL="https://www.centos.org/" [2023-05-01 03:01:27] BUG_REPORT_URL="https://bugs.centos.org/" [2023-05-01 03:01:27] [2023-05-01 03:01:27] CENTOS_MANTISBT_PROJECT="CentOS-7" [2023-05-01 03:01:27] CENTOS_MANTISBT_PROJECT_VERSION="7" [2023-05-01 03:01:27] REDHAT_SUPPORT_PRODUCT="centos" [2023-05-01 03:01:27] REDHAT_SUPPORT_PRODUCT_VERSION="7" [2023-05-01 03:01:27] [2023-05-01 03:01:27] 2023-05-01 02:01:15,669 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************** [2023-05-01 03:01:27] 2023-05-01 02:01:16,172 | DEBUG | pilot.util.monitoring | check_local_space | checking local space on /home/m/BOINC/slots/2 [2023-05-01 03:01:27] 2023-05-01 02:01:16,172 | INFO | pilot.util.container | print_executable | executing command: df -mP /home/m/BOINC/slots/2 [2023-05-01 03:01:27] 2023-05-01 02:01:16,185 | DEBUG | pilot.util.workernode | get_local_disk_space | stdout=Filesystem 1048576-blocks Used Available Capacity Mounted on [2023-05-01 03:01:27] /dev/sda1 455417 28132 404130 7% /home/m/BOINC/slots/2 [2023-05-01 03:01:27] 2023-05-01 02:01:16,185 | DEBUG | pilot.util.workernode | get_local_disk_space | stderr= [2023-05-01 03:01:27] 2023-05-01 02:01:16,185 | INFO | pilot.util.monitoring | check_local_space | sufficient remaining disk space (423761018880 B) [2023-05-01 03:01:27] 2023-05-01 02:01:16,186 | WARNING | pilot.control.job | proceed_with_getjob | since timefloor is set to 0, pilot was only allowed to run one job [2023-05-01 03:01:27] 2023-05-01 02:01:16,186 | DEBUG | pilot.control.job | retrieve | will not set job_aborted yet [2023-05-01 03:01:27] 2023-05-01 02:01:16,186 | WARNING | pilot.util.common | should_abort | data:copytool_out:received graceful stop - abort after this iteration [2023-05-01 03:01:27] 2023-05-01 02:01:16,186 | INFO | pilot.control.job | retrieve | [job] retrieve thread has finished [2023-05-01 03:01:27] 2023-05-01 02:01:16,389 | DEBUG | pilot.control.job | control | job control ending since graceful_stop has been set [2023-05-01 03:01:27] 2023-05-01 02:01:16,389 | DEBUG | pilot.control.job | control | will not set job_aborted yet [2023-05-01 03:01:27] 2023-05-01 02:01:16,389 | INFO | pilot.control.job | control | [job] control thread has finished [2023-05-01 03:01:27] 2023-05-01 02:01:16,398 | DEBUG | pilot.control.job | validate | will not set job_aborted yet [2023-05-01 03:01:27] 2023-05-01 02:01:16,398 | INFO | pilot.control.job | validate | [job] validate thread has finished [2023-05-01 03:01:27] 2023-05-01 02:01:16,523 | DEBUG | pilot.control.data | control | data control ending since graceful_stop has been set [2023-05-01 03:01:27] 2023-05-01 02:01:16,523 | DEBUG | pilot.control.data | control | will not set job_aborted yet [2023-05-01 03:01:27] 2023-05-01 02:01:16,523 | INFO | pilot.control.data | control | [data] control thread has finished [2023-05-01 03:01:27] 2023-05-01 02:01:16,527 | DEBUG | pilot.control.data | copytool_in | will not set job_aborted yet [2023-05-01 03:01:27] 2023-05-01 02:01:16,527 | INFO | pilot.control.data | copytool_in | [data] copytool_in thread has finished [2023-05-01 03:01:27] 2023-05-01 02:01:16,546 | DEBUG | pilot.control.job | create_data_payload | will not set job_aborted yet [2023-05-01 03:01:27] 2023-05-01 02:01:16,547 | INFO | pilot.control.job | create_data_payload | [job] create_data_payload thread has finished [2023-05-01 03:01:27] 2023-05-01 02:01:16,564 | WARNING | pilot.util.common | should_abort | job:job_monitor:received graceful stop - abort after this iteration [2023-05-01 03:01:27] 2023-05-01 02:01:16,648 | DEBUG | pilot.control.payload | control | payload control ending since graceful_stop has been set [2023-05-01 03:01:27] 2023-05-01 02:01:16,648 | DEBUG | pilot.control.payload | control | will not set job_aborted yet [2023-05-01 03:01:27] 2023-05-01 02:01:16,648 | INFO | pilot.control.payload | control | [payload] control thread has finished [2023-05-01 03:01:27] 2023-05-01 02:01:16,684 | INFO | pilot.control.monitor | control | [monitor] control thread has ended [2023-05-01 03:01:27] 2023-05-01 02:01:16,776 | DEBUG | pilot.control.payload | validate_post | will not set job_aborted yet [2023-05-01 03:01:27] 2023-05-01 02:01:16,777 | INFO | pilot.control.payload | validate_post | [payload] validate_post thread has finished [2023-05-01 03:01:27] 2023-05-01 02:01:16,798 | DEBUG | pilot.control.payload | validate_pre | will not set job_aborted yet [2023-05-01 03:01:27] 2023-05-01 02:01:16,798 | INFO | pilot.control.payload | validate_pre | [payload] validate_pre thread has finished [2023-05-01 03:01:27] 2023-05-01 02:01:17,105 | DEBUG | pilot.control.payload | execute_payloads | will not set job_aborted yet [2023-05-01 03:01:27] 2023-05-01 02:01:17,105 | INFO | pilot.control.payload | execute_payloads | [payload] execute_payloads thread has finished [2023-05-01 03:01:27] 2023-05-01 02:01:17,186 | DEBUG | pilot.control.data | copytool_out | will not set job_aborted yet [2023-05-01 03:01:27] 2023-05-01 02:01:17,186 | INFO | pilot.control.data | copytool_out | [data] copytool_out thread has finished [2023-05-01 03:01:27] 2023-05-01 02:01:17,251 | DEBUG | pilot.control.payload | failed_post | will not set job_aborted yet [2023-05-01 03:01:27] 2023-05-01 02:01:17,252 | INFO | pilot.control.payload | failed_post | [payload] failed_post thread has finished [2023-05-01 03:01:27] 2023-05-01 02:01:17,569 | DEBUG | pilot.control.job | job_monitor | will not set job_aborted yet [2023-05-01 03:01:27] 2023-05-01 02:01:17,570 | INFO | pilot.control.job | job_monitor | [job] job monitor thread has finished [2023-05-01 03:01:27] 2023-05-01 02:01:17,607 | WARNING | pilot.util.common | should_abort | data:queue_monitoring:received graceful stop - abort after this iteration [2023-05-01 03:01:27] 2023-05-01 02:01:18,536 | WARNING | pilot.util.common | should_abort | job:queue_monitor:received graceful stop - abort after this iteration [2023-05-01 03:01:27] 2023-05-01 02:01:18,536 | DEBUG | pilot.control.job | queue_monitor | will not set job_aborted yet [2023-05-01 03:01:27] 2023-05-01 02:01:18,536 | INFO | pilot.control.job | queue_monitor | [job] queue monitor thread has finished [2023-05-01 03:01:27] 2023-05-01 02:01:20,608 | DEBUG | pilot.control.data | queue_monitoring | will not set job_aborted yet [2023-05-01 03:01:27] 2023-05-01 02:01:20,608 | INFO | pilot.control.data | queue_monitoring | [data] queue_monitor thread has finished [2023-05-01 03:01:27] 2023-05-01 02:01:26,422 | INFO | pilot.control.payload | get_logging_info | job.realtimelogging is not enabled [2023-05-01 03:01:27] 2023-05-01 02:01:26,422 | DEBUG | pilot.control.payload | run_realtimelog | real-time logging not needed at this point [2023-05-01 03:01:27] 2023-05-01 02:01:26,422 | DEBUG | pilot.control.payload | run_realtimelog | realtime logger was not found, waiting .. [2023-05-01 03:01:27] 2023-05-01 02:01:26,422 | DEBUG | pilot.control.payload | run_realtimelog | will not set job_aborted yet [2023-05-01 03:01:27] 2023-05-01 02:01:26,423 | INFO | pilot.control.payload | run_realtimelog | [payload] run_realtimelog thread has finished [2023-05-01 03:01:27] 2023-05-01 02:01:26,904 | DEBUG | pilot.util.processes | threads_aborted | aborting since only the main Pilot thread is still running (total thread count=1 with 0 daemon threa [2023-05-01 03:01:27] 2023-05-01 02:01:26,904 | DEBUG | pilot.workflow.generic | run | all relevant threads have aborted (thread count=1) [2023-05-01 03:01:27] 2023-05-01 02:01:26,904 | INFO | pilot.workflow.generic | run | end of generic workflow (traces error code: 0) [2023-05-01 03:01:27] 2023-05-01 02:01:26,905 | INFO | root | wrap_up | traces error code: 0 [2023-05-01 03:01:27] 2023-05-01 02:01:26,905 | INFO | root | wrap_up | pilot has finished (exit code=0, shell exit code=0) [2023-05-01 03:01:27] 2023-05-01 02:01:26,959 [wrapper] ==== pilot stdout END ==== [2023-05-01 03:01:27] 2023-05-01 02:01:26,962 [wrapper] ==== wrapper stdout RESUME ==== [2023-05-01 03:01:27] 2023-05-01 02:01:26,965 [wrapper] pilotpid: 2036 [2023-05-01 03:01:27] 2023-05-01 02:01:26,968 [wrapper] Pilot exit status: 0 [2023-05-01 03:01:27] 2023-05-01 02:01:26,978 [wrapper] pandaids: 5836329109 [2023-05-01 03:01:27] 2023-05-01 02:01:26,985 [wrapper] apfmon messages muted [2023-05-01 03:01:27] 2023-05-01 02:01:26,989 [wrapper] Test setup, not cleaning [2023-05-01 03:01:27] 2023-05-01 02:01:26,992 [wrapper] ==== wrapper stdout END ==== [2023-05-01 03:01:27] 2023-05-01 02:01:26,996 [wrapper] ==== wrapper stderr END ==== [2023-05-01 03:01:27] 2023-05-01 02:01:27,002 [wrapper] wrapperexiting ec=0, duration=1841 [2023-05-01 03:01:27] 2023-05-01 02:01:27,005 [wrapper] apfmon messages muted [2023-05-01 03:01:27] *** Error codes and diagnostics *** [2023-05-01 03:01:27] "exeErrorCode": 0, [2023-05-01 03:01:27] "exeErrorDiag": "", [2023-05-01 03:01:27] "pilotErrorCode": 0, [2023-05-01 03:01:27] "pilotErrorDiag": "", [2023-05-01 03:01:27] *** Listing of results directory *** [2023-05-01 03:01:27] total 46912 [2023-05-01 03:01:27] -rw-r--r-- 1 m m 4388 May 1 02:26 queuedata.json [2023-05-01 03:01:27] -rwx------ 1 m m 27540 May 1 02:28 runpilot2-wrapper.sh [2023-05-01 03:01:27] -rw------- 1 m m 413524 May 1 02:28 pilot3.tar.gz [2023-05-01 03:01:27] -rw-rw-r-- 1 m m 107 May 1 02:30 wrapper_26015_x86_64-pc-linux-gnu [2023-05-01 03:01:27] -rwxr-xr-x 1 m m 7986 May 1 02:30 run_atlas [2023-05-01 03:01:27] -rw-rw-r-- 1 m m 112 May 1 02:30 job.xml [2023-05-01 03:01:27] -rw-r--r-- 2 m m 17632 May 1 02:30 start_atlas.sh [2023-05-01 03:01:27] drwxrwx--x 2 m m 4096 May 1 02:30 shared [2023-05-01 03:01:27] -rw-r--r-- 2 m m 425368 May 1 02:30 input.tar.gz [2023-05-01 03:01:27] -rw-rw-r-- 1 m m 5708 May 1 02:30 init_data.xml [2023-05-01 03:01:27] -rw-r--r-- 2 m m 38217911 May 1 02:30 EVNT.04972714._000030.pool.root.1 [2023-05-01 03:01:27] -rw-rw-r-- 1 m m 0 May 1 02:30 boinc_lockfile [2023-05-01 03:01:27] -rw-rw-r-- 1 m m 2662 May 1 02:30 pandaJob.out [2023-05-01 03:01:27] -rw------- 1 m m 424 May 1 02:30 setup.sh.local [2023-05-01 03:01:27] -rw------- 1 m m 1013424 May 1 02:30 agis_schedconf.cvmfs.json [2023-05-01 03:01:27] -rw------- 1 m m 1446236 May 1 02:31 cric_ddmendpoints.json [2023-05-01 03:01:27] drwx------ 4 m m 4096 May 1 02:32 pilot3 [2023-05-01 03:01:27] -rw------- 1 m m 2662060 May 1 02:54 output.1.e8c31bee-87ba-43db-b151-c60132f7bfed_80890.pool.root [2023-05-01 03:01:27] -rw------- 1 m m 1019 May 1 02:54 memory_monitor_summary.json [2023-05-01 03:01:27] -rw-rw-r-- 1 m m 533 May 1 02:55 boinc_task_state.xml [2023-05-01 03:01:27] -rw------- 1 m m 169690 May 1 02:57 e8c31bee-87ba-43db-b151-c60132f7bfed_80890.1.job.log.tgz [2023-05-01 03:01:27] -rw------- 1 m m 7345 May 1 03:01 heartbeat.json [2023-05-01 03:01:27] -rw-rw-r-- 1 m m 25 May 1 03:01 wrapper_checkpoint.txt [2023-05-01 03:01:27] -rw-rw-r-- 1 m m 8192 May 1 03:01 boinc_mmap_file [2023-05-01 03:01:27] -rw------- 1 m m 9193 May 1 03:01 pilotlog.txt [2023-05-01 03:01:27] -rw------- 1 m m 312062 May 1 03:01 e8c31bee-87ba-43db-b151-c60132f7bfed_80890.1.job.log [2023-05-01 03:01:27] -rw------- 1 m m 464 May 1 03:01 output.list [2023-05-01 03:01:27] -rw-rw-r-- 1 m m 748 May 1 03:01 runtime_log [2023-05-01 03:01:27] -rw------- 1 m m 3164160 May 1 03:01 result.tar.gz [2023-05-01 03:01:27] -rw-rw-r-- 1 m m 11913 May 1 03:01 runtime_log.err [2023-05-01 03:01:27] -rw------- 1 m m 627 May 1 03:01 emuNDmpVXD3n7Olcko1bjSoqABFKDmABFKDm7AsVDmJaIKDmh7Ewmm.diag [2023-05-01 03:01:27] -rw-rw-r-- 1 m m 28828 May 1 03:01 stderr.txt [2023-05-01 03:01:27] HITS file was successfully produced: [2023-05-01 03:01:27] -rw------- 1 m m 2662060 May 1 02:54 shared/HITS.pool.root.1 [2023-05-01 03:01:27] *** Contents of shared directory: *** [2023-05-01 03:01:27] total 43452 [2023-05-01 03:01:27] -rw-r--r-- 2 m m 17632 May 1 02:30 start_atlas.sh [2023-05-01 03:01:27] -rw-r--r-- 2 m m 425368 May 1 02:30 input.tar.gz [2023-05-01 03:01:27] -rw-r--r-- 2 m m 38217911 May 1 02:30 ATLAS.root_0 [2023-05-01 03:01:27] -rw------- 1 m m 2662060 May 1 02:54 HITS.pool.root.1 [2023-05-01 03:01:27] -rw------- 1 m m 3164160 May 1 03:01 result.tar.gz 03:01:29 (30702): run_atlas exited; CPU time 957.720061 03:01:29 (30702): called boinc_finish(0) </stderr_txt> ]]>
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