Name | LIONDmvUYD3n7Olcko1bjSoqABFKDmABFKDm7AsVDmbaIKDmedxEem_0 |
Workunit | 2303884 |
Created | 1 May 2023, 2:31:13 UTC |
Sent | 1 May 2023, 3:03:43 UTC |
Report deadline | 8 May 2023, 3:03:43 UTC |
Received | 1 May 2023, 5:12:27 UTC |
Server state | Over |
Outcome | Success |
Client state | Done |
Exit status | 0 (0x00000000) |
Computer ID | 4433 |
Run time | 1 hours 6 min 31 sec |
CPU time | 23 min 13 sec |
Validate state | Valid |
Credit | 38.32 |
Device peak FLOPS | 5.37 GFLOPS |
Application version | ATLAS Simulation v3.01 (native_mt) x86_64-pc-linux-gnu |
Peak working set size | 1.51 GB |
Peak swap size | 11.51 GB |
Peak disk usage | 83.37 MB |
<core_client_version>7.9.3</core_client_version> <![CDATA[ <stderr_txt> 23:04:46 (3863): wrapper (7.7.26015): starting 23:04:46 (3863): wrapper: running run_atlas (--nthreads 1) [2023-04-30 23:04:46] Arguments: --nthreads 1 [2023-04-30 23:04:46] Threads: 1 [2023-04-30 23:04:46] Checking for CVMFS [2023-04-30 23:04:50] Probing /cvmfs/atlas.cern.ch... OK [2023-04-30 23:04:51] Probing /cvmfs/atlas-condb.cern.ch... OK [2023-04-30 23:04:51] Running cvmfs_config stat atlas.cern.ch [2023-04-30 23:04:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE [2023-04-30 23:04:53] 2.9.2.0 4071 0 24576 118479 3 1 3689357 4194305 0 130560 0 0 0.000 823 762 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1 [2023-04-30 23:04:53] CVMFS is ok [2023-04-30 23:04:53] Efficiency of ATLAS tasks can be improved by the following measure(s): [2023-04-30 23:04:53] Small home clusters do not require a local http proxy but it is suggested if [2023-04-30 23:04:53] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks. [2023-04-30 23:04:53] Further information can be found at the LHC@home message board. [2023-04-30 23:04:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 [2023-04-30 23:04:53] Checking for apptainer binary... [2023-04-30 23:04:54] apptainer is not installed, using version from CVMFS [2023-04-30 23:04:54] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname [2023-04-30 23:04:59] 2700x [2023-04-30 23:04:59] apptainer works [2023-04-30 23:05:00] Starting ATLAS job with PandaID=5836353139 [2023-04-30 23:05:00] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/18 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh [2023-05-01 00:11:15] *** The last 200 lines of the pilot log: *** [2023-05-01 00:11:15] 2023-05-01 04:10:53,900 | DEBUG | pilot.user.atlas.utilities | get_cpu_arch | CPU arch script returned: x86-64-v3 [2023-05-01 00:11:15] 2023-05-01 04:10:53,901 | DEBUG | pilot.control.job | get_data_structure | cpu arch=x86-64-v3 [2023-05-01 00:11:15] 2023-05-01 04:10:53,901 | INFO | pilot.user.atlas.utilities | get_memory_values | using path: /var/lib/boinc-client/slots/18/PanDA_Pilot-5836353139/memory_monitor_summary.json (trf n [2023-05-01 00:11:15] 2023-05-01 04:10:53,903 | DEBUG | pilot.user.atlas.utilities | get_memory_monitor_info | summary_dictionary={'Avg': {'nprocs': 5.302, 'nthreads': 6.069, 'pss': 1179544.0, 'rchar': 23912735. [2023-05-01 00:11:15] 2023-05-01 04:10:53,903 | INFO | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard info from prmon json [2023-05-01 00:11:15] 2023-05-01 04:10:53,903 | INFO | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard memory fields from prmon json [2023-05-01 00:11:15] 2023-05-01 04:10:53,904 | INFO | pilot.util.timing | timing_report | .............................. [2023-05-01 00:11:15] 2023-05-01 04:10:53,904 | INFO | pilot.util.timing | timing_report | . Timing measurements: [2023-05-01 00:11:15] 2023-05-01 04:10:53,904 | INFO | pilot.util.timing | timing_report | . get job = 54 s [2023-05-01 00:11:15] 2023-05-01 04:10:53,904 | INFO | pilot.util.timing | timing_report | . initial setup = 53 s [2023-05-01 00:11:15] 2023-05-01 04:10:53,904 | INFO | pilot.util.timing | timing_report | . payload setup = 210 s [2023-05-01 00:11:15] 2023-05-01 04:10:53,904 | INFO | pilot.util.timing | timing_report | . stage-in = 68 s [2023-05-01 00:11:15] 2023-05-01 04:10:53,904 | INFO | pilot.util.timing | timing_report | . payload execution = 2670 s [2023-05-01 00:11:15] 2023-05-01 04:10:53,904 | INFO | pilot.util.timing | timing_report | . stage-out = 383 s [2023-05-01 00:11:15] 2023-05-01 04:10:53,904 | INFO | pilot.util.timing | timing_report | .............................. [2023-05-01 00:11:15] 2023-05-01 04:10:53,905 | DEBUG | pilot.control.job | send_state | data={'jobId': '5836353139', 'state': 'finished', 'timestamp': '2023-05-01T00:09:10-05:00', 'siteNam [2023-05-01 00:11:15] 2023-05-01 04:10:53,906 | DEBUG | pilot.control.job | write_heartbeat_to_file | heartbeat dictionary: {'jobId': '5836353139', 'state': 'finished', 'timestamp': '2023-05-01T00:09:10 [2023-05-01 00:11:15] 2023-05-01 04:10:53,906 | DEBUG | pilot.control.job | write_heartbeat_to_file | wrote heartbeat to file: /var/lib/boinc-client/slots/18/heartbeat.json [2023-05-01 00:11:15] 2023-05-01 04:10:54,101 | INFO | pilot.control.job | make_job_report | [2023-05-01 00:11:15] 2023-05-01 04:10:54,102 | INFO | pilot.control.job | make_job_report | job summary report [2023-05-01 00:11:15] 2023-05-01 04:10:54,102 | INFO | pilot.control.job | make_job_report | -------------------------------------------------- [2023-05-01 00:11:15] 2023-05-01 04:10:54,102 | INFO | pilot.control.job | make_job_report | PanDA job id: 5836353139 [2023-05-01 00:11:15] 2023-05-01 04:10:54,102 | INFO | pilot.control.job | make_job_report | task id: NULL [2023-05-01 00:11:15] 2023-05-01 04:10:54,102 | INFO | pilot.control.job | make_job_report | errors: (none) [2023-05-01 00:11:15] 2023-05-01 04:10:54,102 | INFO | pilot.control.job | make_job_report | status: LOG_TRANSFER = DONE [2023-05-01 00:11:15] 2023-05-01 04:10:54,102 | INFO | pilot.control.job | make_job_report | pilot state: finished [2023-05-01 00:11:15] 2023-05-01 04:10:54,102 | INFO | pilot.control.job | make_job_report | transexitcode: 0 [2023-05-01 00:11:15] 2023-05-01 04:10:54,102 | INFO | pilot.control.job | make_job_report | exeerrorcode: 0 [2023-05-01 00:11:15] 2023-05-01 04:10:54,103 | INFO | pilot.control.job | make_job_report | exeerrordiag: [2023-05-01 00:11:15] 2023-05-01 04:10:54,103 | INFO | pilot.control.job | make_job_report | exitcode: 0 [2023-05-01 00:11:15] 2023-05-01 04:10:54,103 | INFO | pilot.control.job | make_job_report | exitmsg: OK [2023-05-01 00:11:15] 2023-05-01 04:10:54,103 | INFO | pilot.control.job | make_job_report | cpuconsumptiontime: 1385 s [2023-05-01 00:11:15] 2023-05-01 04:10:54,103 | INFO | pilot.control.job | make_job_report | nevents: 2 [2023-05-01 00:11:15] 2023-05-01 04:10:54,103 | INFO | pilot.control.job | make_job_report | neventsw: 0 [2023-05-01 00:11:15] 2023-05-01 04:10:54,103 | INFO | pilot.control.job | make_job_report | pid: 15154 [2023-05-01 00:11:15] 2023-05-01 04:10:54,103 | INFO | pilot.control.job | make_job_report | pgrp: 15154 [2023-05-01 00:11:15] 2023-05-01 04:10:54,103 | INFO | pilot.control.job | make_job_report | corecount: 1 [2023-05-01 00:11:15] 2023-05-01 04:10:54,103 | INFO | pilot.control.job | make_job_report | event service: False [2023-05-01 00:11:15] 2023-05-01 04:10:54,103 | INFO | pilot.control.job | make_job_report | sizes: {0: 2577341, 1: 2578885, 12: 2578885, 23: 2578913, 34: 2578941, 45: 2578969, 56: 2579125, 66: [2023-05-01 00:11:15] 2023-05-01 04:10:54,103 | INFO | pilot.control.job | make_job_report | -------------------------------------------------- [2023-05-01 00:11:15] 2023-05-01 04:10:54,103 | INFO | pilot.control.job | make_job_report | [2023-05-01 00:11:15] 2023-05-01 04:10:54,104 | DEBUG | pilot.control.job | has_job_completed | ls -lF /var/lib/boinc-client/slots/18: [2023-05-01 00:11:15] [2023-05-01 00:11:15] 2023-05-01 04:10:54,104 | INFO | pilot.util.container | print_executable | executing command: ls -lF /var/lib/boinc-client/slots/18 [2023-05-01 00:11:15] 2023-05-01 04:10:54,165 | DEBUG | pilot.control.job | has_job_completed | total 44288 [2023-05-01 00:11:15] -rw------- 1 boinc boinc 440395 May 1 00:10 44e5271b-ddf0-4a7d-9093-aabb2c36c45d_88673.1.job.log [2023-05-01 00:11:15] -rw------- 1 boinc boinc 185563 May 1 00:05 44e5271b-ddf0-4a7d-9093-aabb2c36c45d_88673.1.job.log.tgz [2023-05-01 00:11:15] -rw------- 1 boinc boinc 1013424 Apr 30 23:07 agis_schedconf.cvmfs.json [2023-05-01 00:11:15] -rw-r--r-- 1 boinc boinc 0 Apr 30 23:04 boinc_lockfile [2023-05-01 00:11:15] -rw-r--r-- 1 boinc boinc 8192 May 1 00:10 boinc_mmap_file [2023-05-01 00:11:15] -rw-r--r-- 1 boinc boinc 535 May 1 00:02 boinc_task_state.xml [2023-05-01 00:11:15] -rw------- 1 boinc boinc 1446236 Apr 30 23:08 cric_ddmendpoints.json [2023-05-01 00:11:15] -rw-r--r-- 2 boinc boinc 38217911 Apr 30 23:04 EVNT.04972714._000030.pool.root.1 [2023-05-01 00:11:15] -rw------- 1 boinc boinc 6608 May 1 00:10 heartbeat.json [2023-05-01 00:11:15] -rw-r--r-- 1 boinc boinc 9175 Apr 30 23:04 init_data.xml [2023-05-01 00:11:15] -rw-r--r-- 2 boinc boinc 425367 Apr 30 23:04 input.tar.gz [2023-05-01 00:11:15] -rw-r--r-- 1 boinc boinc 112 Apr 30 23:04 job.xml [2023-05-01 00:11:15] -rw------- 1 boinc boinc 128 Apr 30 23:05 LIONDmvUYD3n7Olcko1bjSoqABFKDmABFKDm7AsVDmbaIKDmedxEem.diag [2023-05-01 00:11:15] -rw------- 1 boinc boinc 1030 May 1 00:02 memory_monitor_summary.json [2023-05-01 00:11:15] -rw------- 1 boinc boinc 2589854 May 1 00:01 output.1.44e5271b-ddf0-4a7d-9093-aabb2c36c45d_88673.pool.root [2023-05-01 00:11:15] -rw------- 1 boinc boinc 464 May 1 00:08 output.list [2023-05-01 00:11:15] -rw-r--r-- 1 boinc boinc 2662 Apr 30 23:04 pandaJob.out [2023-05-01 00:11:15] drwxrwx--- 2 boinc boinc 4096 May 1 00:08 PanDA_Pilot-5836353139/ [2023-05-01 00:11:15] drwx------ 4 boinc boinc 4096 Apr 30 23:09 pilot3/ [2023-05-01 00:11:15] -rw------- 1 boinc boinc 413524 Apr 30 22:31 pilot3.tar.gz [2023-05-01 00:11:15] -rw------- 1 boinc boinc 428231 May 1 00:10 pilotlog.txt [2023-05-01 00:11:15] -rw-r--r-- 1 boinc boinc 4388 Apr 30 22:31 queuedata.json [2023-05-01 00:11:15] -rwxr-xr-x 1 boinc boinc 7986 Apr 30 23:04 run_atlas* [2023-05-01 00:11:15] -rwx------ 1 boinc boinc 27540 Apr 30 22:31 runpilot2-wrapper.sh* [2023-05-01 00:11:15] -rw-r--r-- 1 boinc boinc 407 Apr 30 23:05 runtime_log [2023-05-01 00:11:15] -rw-r--r-- 1 boinc boinc 7841 Apr 30 23:05 runtime_log.err [2023-05-01 00:11:15] -rw------- 1 boinc boinc 424 Apr 30 23:05 setup.sh.local [2023-05-01 00:11:15] drwxrwx--x 2 boinc boinc 4096 Apr 30 23:04 shared/ [2023-05-01 00:11:15] -rw-r--r-- 2 boinc boinc 17632 Apr 30 23:04 start_atlas.sh [2023-05-01 00:11:15] -rw-r--r-- 1 boinc boinc 2023 Apr 30 23:05 stderr.txt [2023-05-01 00:11:15] -rw-r--r-- 1 boinc boinc 107 Apr 30 23:04 wrapper_26015_x86_64-pc-linux-gnu [2023-05-01 00:11:15] -rw-r--r-- 1 boinc boinc 26 May 1 00:10 wrapper_checkpoint.txt [2023-05-01 00:11:15] 2023-05-01 04:10:54,166 | INFO | pilot.util.queuehandling | queue_report | queue jobs had 0 job(s) [purged] [2023-05-01 00:11:15] 2023-05-01 04:10:54,166 | INFO | pilot.util.queuehandling | queue_report | queue payloads had 0 job(s) [purged] [2023-05-01 00:11:15] 2023-05-01 04:10:54,166 | INFO | pilot.util.queuehandling | queue_report | queue data_in had 0 job(s) [purged] [2023-05-01 00:11:15] 2023-05-01 04:10:54,166 | INFO | pilot.util.queuehandling | queue_report | queue data_out had 0 job(s) [purged] [2023-05-01 00:11:15] 2023-05-01 04:10:54,166 | INFO | pilot.util.queuehandling | queue_report | queue current_data_in had 0 job(s) [purged] [2023-05-01 00:11:15] 2023-05-01 04:10:54,166 | INFO | pilot.util.queuehandling | queue_report | queue validated_jobs had 0 job(s) [purged] [2023-05-01 00:11:15] 2023-05-01 04:10:54,166 | INFO | pilot.util.queuehandling | queue_report | queue validated_payloads had 0 job(s) [purged] [2023-05-01 00:11:15] 2023-05-01 04:10:54,166 | INFO | pilot.util.queuehandling | queue_report | queue monitored_payloads had 0 job(s) [purged] [2023-05-01 00:11:15] 2023-05-01 04:10:54,166 | INFO | pilot.util.queuehandling | queue_report | queue finished_jobs had 0 job(s) [purged] [2023-05-01 00:11:15] 2023-05-01 04:10:54,166 | INFO | pilot.util.queuehandling | queue_report | queue finished_payloads had 0 job(s) [purged] [2023-05-01 00:11:15] 2023-05-01 04:10:54,166 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_in had 1 job(s) [purged] [2023-05-01 00:11:15] 2023-05-01 04:10:54,166 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_out had 0 job(s) [purged] [2023-05-01 00:11:15] 2023-05-01 04:10:54,167 | INFO | pilot.util.queuehandling | queue_report | queue failed_jobs had 0 job(s) [purged] [2023-05-01 00:11:15] 2023-05-01 04:10:54,167 | INFO | pilot.util.queuehandling | queue_report | queue failed_payloads had 0 job(s) [purged] [2023-05-01 00:11:15] 2023-05-01 04:10:54,167 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_in had 0 job(s) [purged] [2023-05-01 00:11:15] 2023-05-01 04:10:54,167 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_out had 0 job(s) [purged] [2023-05-01 00:11:15] 2023-05-01 04:10:54,167 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobs had 0 job(s) [purged] [2023-05-01 00:11:15] 2023-05-01 04:10:54,167 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobids has 1 job(s) [2023-05-01 00:11:15] 2023-05-01 04:10:54,167 | INFO | pilot.util.queuehandling | queue_report | queue realtimelog_payloads had 0 job(s) [purged] [2023-05-01 00:11:15] 2023-05-01 04:10:54,167 | INFO | pilot.util.queuehandling | queue_report | queue messages had 0 job(s) [purged] [2023-05-01 00:11:15] 2023-05-01 04:10:54,167 | INFO | pilot.control.job | has_job_completed | job 5836353139 has completed (purged errors) [2023-05-01 00:11:15] 2023-05-01 04:10:54,167 | DEBUG | pilot.util.realtimelogger | cleanup | attempting real-time logger cleanup [2023-05-01 00:11:15] 2023-05-01 04:10:54,167 | INFO | pilot.util.processes | cleanup | overall cleanup function is called [2023-05-01 00:11:15] 2023-05-01 04:10:54,172 | DEBUG | pilot.util.processes | cleanup | work directory was removed: /var/lib/boinc-client/slots/18/PanDA_Pilot-5836353139 [2023-05-01 00:11:15] 2023-05-01 04:10:55,175 | INFO | pilot.info.jobdata | collect_zombies | --- collectZombieJob: --- 10, [15154] [2023-05-01 00:11:15] 2023-05-01 04:10:55,175 | INFO | pilot.info.jobdata | collect_zombies | zombie collector trying to kill pid 15154 [2023-05-01 00:11:15] 2023-05-01 04:10:55,176 | INFO | pilot.info.jobdata | collect_zombies | harmless exception when collecting zombies: [Errno 10] No child processes [2023-05-01 00:11:15] 2023-05-01 04:10:56,180 | INFO | pilot.util.processes | cleanup | collected zombie processes [2023-05-01 00:11:15] 2023-05-01 04:10:56,180 | INFO | pilot.util.processes | cleanup | will now attempt to kill all subprocesses of pid=15154 [2023-05-01 00:11:15] 2023-05-01 04:10:56,727 | INFO | pilot.util.processes | kill_processes | process IDs to be killed: [15154] (in reverse order) [2023-05-01 00:11:15] 2023-05-01 04:10:57,734 | WARNING | pilot.util.processes | kill_processes | found no corresponding commands to process id(s) [2023-05-01 00:11:15] 2023-05-01 04:10:57,735 | INFO | pilot.util.processes | kill_orphans | Do not look for orphan processes in BOINC jobs [2023-05-01 00:11:15] 2023-05-01 04:10:57,736 | DEBUG | pilot.util.queuehandling | purge_queue | queue purged [2023-05-01 00:11:15] 2023-05-01 04:10:57,736 | INFO | pilot.control.job | retrieve | ready for new job [2023-05-01 00:11:15] 2023-05-01 04:10:57,736 | INFO | root | retrieve | pilot has finished with previous job - re-establishing logging [2023-05-01 00:11:15] 2023-05-01 04:10:57,738 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************** [2023-05-01 00:11:15] 2023-05-01 04:10:57,738 | INFO | pilot.util.auxiliary | pilot_version_banner | *** PanDA Pilot version 3.6.0 (68) *** [2023-05-01 00:11:15] 2023-05-01 04:10:57,738 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************** [2023-05-01 00:11:15] 2023-05-01 04:10:57,738 | INFO | pilot.util.auxiliary | pilot_version_banner | [2023-05-01 00:11:15] 2023-05-01 04:10:57,756 | INFO | pilot.util.auxiliary | display_architecture_info | architecture information: [2023-05-01 00:11:15] 2023-05-01 04:10:57,771 | INFO | pilot.util.container | print_executable | executing command: cat /etc/os-release [2023-05-01 00:11:15] 2023-05-01 04:10:57,951 | INFO | pilot.util.filehandling | dump | cat /etc/os-release: [2023-05-01 00:11:15] NAME="CentOS Linux" [2023-05-01 00:11:15] VERSION="7 (Core)" [2023-05-01 00:11:15] ID="centos" [2023-05-01 00:11:15] ID_LIKE="rhel fedora" [2023-05-01 00:11:15] VERSION_ID="7" [2023-05-01 00:11:15] PRETTY_NAME="CentOS Linux 7 (Core)" [2023-05-01 00:11:15] ANSI_COLOR="0;31" [2023-05-01 00:11:15] CPE_NAME="cpe:/o:centos:centos:7" [2023-05-01 00:11:15] HOME_URL="https://www.centos.org/" [2023-05-01 00:11:15] BUG_REPORT_URL="https://bugs.centos.org/" [2023-05-01 00:11:15] [2023-05-01 00:11:15] CENTOS_MANTISBT_PROJECT="CentOS-7" [2023-05-01 00:11:15] CENTOS_MANTISBT_PROJECT_VERSION="7" [2023-05-01 00:11:15] REDHAT_SUPPORT_PRODUCT="centos" [2023-05-01 00:11:15] REDHAT_SUPPORT_PRODUCT_VERSION="7" [2023-05-01 00:11:15] [2023-05-01 00:11:15] 2023-05-01 04:10:57,952 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************** [2023-05-01 00:11:15] 2023-05-01 04:10:58,455 | DEBUG | pilot.util.monitoring | check_local_space | checking local space on /var/lib/boinc-client/slots/18 [2023-05-01 00:11:15] 2023-05-01 04:10:58,456 | INFO | pilot.util.container | print_executable | executing command: df -mP /var/lib/boinc-client/slots/18 [2023-05-01 00:11:15] 2023-05-01 04:10:58,808 | DEBUG | pilot.util.workernode | get_local_disk_space | stdout=Filesystem 1048576-blocks Used Available Capacity Mounted on [2023-05-01 00:11:15] /dev/nvme0n1p2 479119 166057 288653 37% /var/lib/boinc-client/slots/18 [2023-05-01 00:11:15] 2023-05-01 04:10:58,809 | DEBUG | pilot.util.workernode | get_local_disk_space | stderr= [2023-05-01 00:11:15] 2023-05-01 04:10:58,809 | INFO | pilot.util.monitoring | check_local_space | sufficient remaining disk space (302674608128 B) [2023-05-01 00:11:15] 2023-05-01 04:10:58,809 | WARNING | pilot.control.job | proceed_with_getjob | since timefloor is set to 0, pilot was only allowed to run one job [2023-05-01 00:11:15] 2023-05-01 04:10:58,809 | DEBUG | pilot.control.job | retrieve | will not set job_aborted yet [2023-05-01 00:11:15] 2023-05-01 04:10:58,810 | INFO | pilot.control.job | retrieve | [job] retrieve thread has finished [2023-05-01 00:11:15] 2023-05-01 04:10:58,810 | WARNING | pilot.control.monitor | control | aborting monitor loop since graceful_stop has been set [2023-05-01 00:11:15] 2023-05-01 04:10:58,810 | INFO | pilot.control.monitor | control | [monitor] control thread has ended [2023-05-01 00:11:15] 2023-05-01 04:10:58,811 | WARNING | pilot.util.common | should_abort | data:queue_monitoring:received graceful stop - abort after this iteration [2023-05-01 00:11:15] 2023-05-01 04:10:58,819 | DEBUG | pilot.control.payload | execute_payloads | will not set job_aborted yet [2023-05-01 00:11:15] 2023-05-01 04:10:58,820 | INFO | pilot.control.payload | execute_payloads | [payload] execute_payloads thread has finished [2023-05-01 00:11:15] 2023-05-01 04:10:59,102 | DEBUG | pilot.control.job | create_data_payload | will not set job_aborted yet [2023-05-01 00:11:15] 2023-05-01 04:10:59,103 | INFO | pilot.control.job | create_data_payload | [job] create_data_payload thread has finished [2023-05-01 00:11:15] 2023-05-01 04:10:59,127 | WARNING | pilot.util.common | should_abort | job:queue_monitor:received graceful stop - abort after this iteration [2023-05-01 00:11:15] 2023-05-01 04:10:59,128 | DEBUG | pilot.control.job | queue_monitor | will not set job_aborted yet [2023-05-01 00:11:15] 2023-05-01 04:10:59,128 | INFO | pilot.control.job | queue_monitor | [job] queue monitor thread has finished [2023-05-01 00:11:15] 2023-05-01 04:10:59,271 | DEBUG | pilot.control.payload | validate_post | will not set job_aborted yet [2023-05-01 00:11:15] 2023-05-01 04:10:59,272 | INFO | pilot.control.payload | validate_post | [payload] validate_post thread has finished [2023-05-01 00:11:15] 2023-05-01 04:10:59,275 | DEBUG | pilot.control.data | control | data control ending since graceful_stop has been set [2023-05-01 00:11:15] 2023-05-01 04:10:59,276 | DEBUG | pilot.control.data | control | will not set job_aborted yet [2023-05-01 00:11:15] 2023-05-01 04:10:59,276 | INFO | pilot.control.data | control | [data] control thread has finished [2023-05-01 00:11:15] 2023-05-01 04:10:59,411 | DEBUG | pilot.control.data | copytool_in | will not set job_aborted yet [2023-05-01 00:11:15] 2023-05-01 04:10:59,412 | INFO | pilot.control.data | copytool_in | [data] copytool_in thread has finished [2023-05-01 00:11:15] 2023-05-01 04:10:59,487 | DEBUG | pilot.control.payload | validate_pre | will not set job_aborted yet [2023-05-01 00:11:15] 2023-05-01 04:10:59,487 | INFO | pilot.control.payload | validate_pre | [payload] validate_pre thread has finished [2023-05-01 00:11:15] 2023-05-01 04:10:59,599 | DEBUG | pilot.control.payload | control | payload control ending since graceful_stop has been set [2023-05-01 00:11:15] 2023-05-01 04:10:59,604 | DEBUG | pilot.control.payload | control | will not set job_aborted yet [2023-05-01 00:11:15] 2023-05-01 04:10:59,604 | INFO | pilot.control.payload | control | [payload] control thread has finished [2023-05-01 00:11:15] 2023-05-01 04:10:59,710 | WARNING | pilot.util.common | should_abort | data:copytool_out:received graceful stop - abort after this iteration [2023-05-01 00:11:15] 2023-05-01 04:10:59,907 | DEBUG | pilot.control.job | control | job control ending since graceful_stop has been set [2023-05-01 00:11:15] 2023-05-01 04:10:59,908 | DEBUG | pilot.control.job | control | will not set job_aborted yet [2023-05-01 00:11:15] 2023-05-01 04:10:59,908 | INFO | pilot.control.job | control | [job] control thread has finished [2023-05-01 00:11:15] 2023-05-01 04:11:00,158 | DEBUG | pilot.control.job | validate | will not set job_aborted yet [2023-05-01 00:11:15] 2023-05-01 04:11:00,159 | INFO | pilot.control.job | validate | [job] validate thread has finished [2023-05-01 00:11:15] 2023-05-01 04:11:00,299 | DEBUG | pilot.control.payload | failed_post | will not set job_aborted yet [2023-05-01 00:11:15] 2023-05-01 04:11:00,300 | INFO | pilot.control.payload | failed_post | [payload] failed_post thread has finished [2023-05-01 00:11:15] 2023-05-01 04:11:00,711 | DEBUG | pilot.control.data | copytool_out | will not set job_aborted yet [2023-05-01 00:11:15] 2023-05-01 04:11:00,712 | INFO | pilot.control.data | copytool_out | [data] copytool_out thread has finished [2023-05-01 00:11:15] 2023-05-01 04:11:01,823 | DEBUG | pilot.control.data | queue_monitoring | will not set job_aborted yet [2023-05-01 00:11:15] 2023-05-01 04:11:01,824 | INFO | pilot.control.data | queue_monitoring | [data] queue_monitor thread has finished [2023-05-01 00:11:15] 2023-05-01 04:11:09,531 | INFO | pilot.control.payload | get_logging_info | job.realtimelogging is not enabled [2023-05-01 00:11:15] 2023-05-01 04:11:09,531 | DEBUG | pilot.control.payload | run_realtimelog | real-time logging not needed at this point [2023-05-01 00:11:15] 2023-05-01 04:11:09,531 | DEBUG | pilot.control.payload | run_realtimelog | realtime logger was not found, waiting .. [2023-05-01 00:11:15] 2023-05-01 04:11:09,531 | DEBUG | pilot.control.payload | run_realtimelog | will not set job_aborted yet [2023-05-01 00:11:15] 2023-05-01 04:11:09,531 | INFO | pilot.control.payload | run_realtimelog | [payload] run_realtimelog thread has finished [2023-05-01 00:11:15] 2023-05-01 04:11:09,663 | DEBUG | pilot.util.processes | threads_aborted | aborting since only the main Pilot thread is still running (total thread count=1 with 0 daemon threa [2023-05-01 00:11:15] 2023-05-01 04:11:09,664 | DEBUG | pilot.workflow.generic | run | all relevant threads have aborted (thread count=1) [2023-05-01 00:11:15] 2023-05-01 04:11:09,664 | INFO | pilot.workflow.generic | run | end of generic workflow (traces error code: 0) [2023-05-01 00:11:15] 2023-05-01 04:11:09,665 | INFO | root | wrap_up | traces error code: 0 [2023-05-01 00:11:15] 2023-05-01 04:11:09,665 | INFO | root | wrap_up | pilot has finished (exit code=0, shell exit code=0) [2023-05-01 00:11:15] 2023-05-01 04:11:10,068 [wrapper] ==== pilot stdout END ==== [2023-05-01 00:11:15] 2023-05-01 04:11:10,199 [wrapper] ==== wrapper stdout RESUME ==== [2023-05-01 00:11:15] 2023-05-01 04:11:10,327 [wrapper] pilotpid: 7660 [2023-05-01 00:11:15] 2023-05-01 04:11:10,459 [wrapper] Pilot exit status: 0 [2023-05-01 00:11:15] 2023-05-01 04:11:10,851 [wrapper] pandaids: 5836353139 [2023-05-01 00:11:15] 2023-05-01 04:11:11,015 [wrapper] apfmon messages muted [2023-05-01 00:11:15] 2023-05-01 04:11:11,115 [wrapper] Test setup, not cleaning [2023-05-01 00:11:15] 2023-05-01 04:11:11,169 [wrapper] ==== wrapper stdout END ==== [2023-05-01 00:11:15] 2023-05-01 04:11:11,307 [wrapper] ==== wrapper stderr END ==== [2023-05-01 00:11:15] 2023-05-01 04:11:11,525 [wrapper] wrapperexiting ec=0, duration=3966 [2023-05-01 00:11:15] 2023-05-01 04:11:11,630 [wrapper] apfmon messages muted [2023-05-01 00:11:15] *** Error codes and diagnostics *** [2023-05-01 00:11:15] "exeErrorCode": 0, [2023-05-01 00:11:15] "exeErrorDiag": "", [2023-05-01 00:11:15] "pilotErrorCode": 0, [2023-05-01 00:11:15] "pilotErrorDiag": "", [2023-05-01 00:11:15] *** Listing of results directory *** [2023-05-01 00:11:15] total 47100 [2023-05-01 00:11:15] -rwx------ 1 boinc boinc 27540 Apr 30 22:31 runpilot2-wrapper.sh [2023-05-01 00:11:15] -rw-r--r-- 1 boinc boinc 4388 Apr 30 22:31 queuedata.json [2023-05-01 00:11:15] -rw------- 1 boinc boinc 413524 Apr 30 22:31 pilot3.tar.gz [2023-05-01 00:11:15] -rw-r--r-- 1 boinc boinc 107 Apr 30 23:04 wrapper_26015_x86_64-pc-linux-gnu [2023-05-01 00:11:15] -rwxr-xr-x 1 boinc boinc 7986 Apr 30 23:04 run_atlas [2023-05-01 00:11:15] -rw-r--r-- 1 boinc boinc 112 Apr 30 23:04 job.xml [2023-05-01 00:11:15] -rw-r--r-- 2 boinc boinc 38217911 Apr 30 23:04 EVNT.04972714._000030.pool.root.1 [2023-05-01 00:11:15] -rw-r--r-- 2 boinc boinc 17632 Apr 30 23:04 start_atlas.sh [2023-05-01 00:11:15] drwxrwx--x 2 boinc boinc 4096 Apr 30 23:04 shared [2023-05-01 00:11:15] -rw-r--r-- 2 boinc boinc 425367 Apr 30 23:04 input.tar.gz [2023-05-01 00:11:15] -rw-r--r-- 1 boinc boinc 9175 Apr 30 23:04 init_data.xml [2023-05-01 00:11:15] -rw-r--r-- 1 boinc boinc 0 Apr 30 23:04 boinc_lockfile [2023-05-01 00:11:15] -rw-r--r-- 1 boinc boinc 2662 Apr 30 23:04 pandaJob.out [2023-05-01 00:11:15] -rw------- 1 boinc boinc 424 Apr 30 23:05 setup.sh.local [2023-05-01 00:11:15] -rw------- 1 boinc boinc 1013424 Apr 30 23:07 agis_schedconf.cvmfs.json [2023-05-01 00:11:15] -rw------- 1 boinc boinc 1446236 Apr 30 23:08 cric_ddmendpoints.json [2023-05-01 00:11:15] drwx------ 4 boinc boinc 4096 Apr 30 23:09 pilot3 [2023-05-01 00:11:15] -rw------- 1 boinc boinc 2589854 May 1 00:01 output.1.44e5271b-ddf0-4a7d-9093-aabb2c36c45d_88673.pool.root [2023-05-01 00:11:15] -rw------- 1 boinc boinc 1030 May 1 00:02 memory_monitor_summary.json [2023-05-01 00:11:15] -rw-r--r-- 1 boinc boinc 535 May 1 00:02 boinc_task_state.xml [2023-05-01 00:11:15] -rw------- 1 boinc boinc 185563 May 1 00:05 44e5271b-ddf0-4a7d-9093-aabb2c36c45d_88673.1.job.log.tgz [2023-05-01 00:11:15] -rw------- 1 boinc boinc 6608 May 1 00:10 heartbeat.json [2023-05-01 00:11:15] -rw-r--r-- 1 boinc boinc 8192 May 1 00:10 boinc_mmap_file [2023-05-01 00:11:15] -rw-r--r-- 1 boinc boinc 26 May 1 00:10 wrapper_checkpoint.txt [2023-05-01 00:11:15] -rw------- 1 boinc boinc 8942 May 1 00:11 pilotlog.txt [2023-05-01 00:11:15] -rw------- 1 boinc boinc 457332 May 1 00:11 44e5271b-ddf0-4a7d-9093-aabb2c36c45d_88673.1.job.log [2023-05-01 00:11:15] -rw------- 1 boinc boinc 464 May 1 00:11 output.list [2023-05-01 00:11:15] -rw-r--r-- 1 boinc boinc 748 May 1 00:11 runtime_log [2023-05-01 00:11:15] -rw------- 1 boinc boinc 3256320 May 1 00:11 result.tar.gz [2023-05-01 00:11:15] -rw-r--r-- 1 boinc boinc 11957 May 1 00:11 runtime_log.err [2023-05-01 00:11:15] -rw------- 1 boinc boinc 634 May 1 00:11 LIONDmvUYD3n7Olcko1bjSoqABFKDmABFKDm7AsVDmbaIKDmedxEem.diag [2023-05-01 00:11:15] -rw-r--r-- 1 boinc boinc 29470 May 1 00:11 stderr.txt [2023-05-01 00:11:15] HITS file was successfully produced: [2023-05-01 00:11:15] -rw------- 1 boinc boinc 2589854 May 1 00:01 shared/HITS.pool.root.1 [2023-05-01 00:11:15] *** Contents of shared directory: *** [2023-05-01 00:11:15] total 43476 [2023-05-01 00:11:15] -rw-r--r-- 2 boinc boinc 38217911 Apr 30 23:04 ATLAS.root_0 [2023-05-01 00:11:15] -rw-r--r-- 2 boinc boinc 17632 Apr 30 23:04 start_atlas.sh [2023-05-01 00:11:15] -rw-r--r-- 2 boinc boinc 425367 Apr 30 23:04 input.tar.gz [2023-05-01 00:11:15] -rw------- 1 boinc boinc 2589854 May 1 00:01 HITS.pool.root.1 [2023-05-01 00:11:15] -rw------- 1 boinc boinc 3256320 May 1 00:11 result.tar.gz 00:11:16 (3863): run_atlas exited; CPU time 1393.323084 00:11:16 (3863): called boinc_finish(0) </stderr_txt> ]]>
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