Name 9qJNDmUeOE3n7Olcko1bjSoqABFKDmABFKDm7AsVDmimIKDmoy7Bcm_0
Workunit 2304528
Created 3 May 2023, 10:12:36 UTC
Sent 3 May 2023, 10:16:19 UTC
Report deadline 10 May 2023, 10:16:19 UTC
Received 3 May 2023, 10:31:52 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 4862
Run time 14 min 55 sec
CPU time 3 min 2 sec
Validate state Valid
Credit 18.43
Device peak FLOPS 38.68 GFLOPS
Application version ATLAS Simulation v3.01 (vbox64_mt_mcore_atlas)
windows_x86_64
Peak working set size 117.45 MB
Peak swap size 132.03 MB
Peak disk usage 875.96 MB

Stderr output

<core_client_version>7.16.20</core_client_version>
<![CDATA[
<stderr_txt>
2023-05-03 12:16:35 (16432): Detected: vboxwrapper 26206
2023-05-03 12:16:35 (16432): Detected: BOINC client v7.16.20
2023-05-03 12:16:35 (16432): Detected: VirtualBox VboxManage Interface (Version: 6.0.14)
2023-05-03 12:16:35 (16432): Successfully copied 'init_data.xml' to the shared directory.
2023-05-03 12:16:36 (16432): Create VM. (boinc_32e2ecb5fa9e36b6, slot#25)
2023-05-03 12:16:37 (16432): Setting Memory Size for VM. (4800MB)
2023-05-03 12:16:37 (16432): Setting CPU Count for VM. (8)
2023-05-03 12:16:37 (16432): Setting Chipset Options for VM.
2023-05-03 12:16:37 (16432): Setting Graphics Controller Options for VM.
2023-05-03 12:16:38 (16432): Setting Boot Options for VM.
2023-05-03 12:16:38 (16432): Setting Network Configuration for NAT.
2023-05-03 12:16:38 (16432): Enabling VM Network Access.
2023-05-03 12:16:38 (16432): Disabling USB Support for VM.
2023-05-03 12:16:39 (16432): Disabling COM Port Support for VM.
2023-05-03 12:16:39 (16432): Disabling LPT Port Support for VM.
2023-05-03 12:16:39 (16432): Disabling Audio Support for VM.
2023-05-03 12:16:39 (16432): Disabling Clipboard Support for VM.
2023-05-03 12:16:40 (16432): Disabling Drag and Drop Support for VM.
2023-05-03 12:16:40 (16432): Adding storage controller(s) to VM.
2023-05-03 12:16:40 (16432): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2023-05-03 12:16:41 (16432): Adding VirtualBox Guest Additions to VM.
2023-05-03 12:16:41 (16432): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2023-05-03 12:16:41 (16432): forwarding host port 53623 to guest port 80
2023-05-03 12:16:41 (16432): Enabling remote desktop for VM.
2023-05-03 12:16:42 (16432): Enabling shared directory for VM.
2023-05-03 12:16:42 (16432): Starting VM using VBoxManage interface. (boinc_32e2ecb5fa9e36b6, slot#25)
2023-05-03 12:16:47 (16432): Successfully started VM. (PID = '23064')
2023-05-03 12:16:47 (16432): Reporting VM Process ID to BOINC.
2023-05-03 12:16:47 (16432): Guest Log: BIOS: VirtualBox 6.0.14
2023-05-03 12:16:47 (16432): Guest Log: CPUID EDX: 0x178bfbff
2023-05-03 12:16:47 (16432): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2023-05-03 12:16:47 (16432): VM state change detected. (old = 'poweredoff', new = 'running')
2023-05-03 12:16:47 (16432): Detected: Web Application Enabled (http://localhost:53623)
2023-05-03 12:16:47 (16432): Detected: Remote Desktop Enabled (localhost:53624)
2023-05-03 12:16:47 (16432): Preference change detected
2023-05-03 12:16:47 (16432): Setting CPU throttle for VM. (100%)
2023-05-03 12:16:47 (16432): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 600 seconds) or (Vbox_job.xml: 900 seconds))
2023-05-03 12:16:49 (16432): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2023-05-03 12:16:49 (16432): Guest Log: BIOS: Booting from Hard Disk...
2023-05-03 12:16:52 (16432): Guest Log: BIOS: KBD: unsupported int 16h function 03
2023-05-03 12:16:52 (16432): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2023-05-03 12:16:52 (16432): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2023-05-03 12:16:52 (16432): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2023-05-03 12:16:52 (16432): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2023-05-03 12:16:52 (16432): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2023-05-03 12:16:52 (16432): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2023-05-03 12:16:52 (16432): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2023-05-03 12:16:52 (16432): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2023-05-03 12:16:52 (16432): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2023-05-03 12:16:52 (16432): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2023-05-03 12:16:52 (16432): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2023-05-03 12:16:52 (16432): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2023-05-03 12:16:52 (16432): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2023-05-03 12:16:52 (16432): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2023-05-03 12:16:52 (16432): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2023-05-03 12:16:52 (16432): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2023-05-03 12:16:52 (16432): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2023-05-03 12:16:52 (16432): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2023-05-03 12:16:52 (16432): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2023-05-03 12:16:52 (16432): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2023-05-03 12:16:52 (16432): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2023-05-03 12:16:52 (16432): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2023-05-03 12:16:52 (16432): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2023-05-03 12:16:52 (16432): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2023-05-03 12:16:52 (16432): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2023-05-03 12:16:52 (16432): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2023-05-03 12:16:52 (16432): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2023-05-03 12:16:52 (16432): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2023-05-03 12:16:52 (16432): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2023-05-03 12:16:52 (16432): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2023-05-03 12:16:52 (16432): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2023-05-03 12:17:00 (16432): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2023-05-03 12:17:00 (16432): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2023-05-03 12:17:05 (16432): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2023-05-03 12:17:05 (16432): Guest Log: 00:00:00.000123 main     Log opened 2023-05-03T12:17:04.027204000Z
2023-05-03 12:17:05 (16432): Guest Log: 00:00:00.000272 main     OS Product: Linux
2023-05-03 12:17:05 (16432): Guest Log: 00:00:00.000343 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2023-05-03 12:17:05 (16432): Guest Log: 00:00:00.000371 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2023-05-03 12:17:05 (16432): Guest Log: 00:00:00.000396 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2023-05-03 12:17:05 (16432): Guest Log: 00:00:00.000397 main     Process ID: 1381
2023-05-03 12:17:05 (16432): Guest Log: 00:00:00.000397 main     Package type: LINUX_64BITS_GENERIC
2023-05-03 12:17:05 (16432): Guest Log: 00:00:00.001224 main     5.2.32 r132073 started. Verbose level = 0
2023-05-03 12:17:05 (16432): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2023-05-03 12:17:05 (16432): Guest Log: [INFO] Mounting shared directory
2023-05-03 12:17:05 (16432): Guest Log: [INFO] Checking for init_data.xml
2023-05-03 12:17:10 (16432): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2023-05-03 12:17:10 (16432): Guest Log: [INFO] Detected branch: dev
2023-05-03 12:17:10 (16432): Guest Log: This is the dev version of the ATLAS job wrapper
2023-05-03 12:17:10 (16432): Guest Log: Copying input files
2023-05-03 12:17:10 (16432): Guest Log: Copied input files into RunAtlas.
2023-05-03 12:17:10 (16432): Guest Log: This VM did not configure a local http proxy via BOINC.
2023-05-03 12:17:10 (16432): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2023-05-03 12:17:10 (16432): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2023-05-03 12:17:10 (16432): Guest Log: Further information can be found at the LHC@home message board.
2023-05-03 12:17:15 (16432): Guest Log: 00:00:10.003601 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 189 133 292 000ns (GuestNow=1 683 109 034 896 171 000 ns GuestLast=1 683 116 224 029 463 000 ns fSetTimeLastLoop=true )
2023-05-03 12:17:18 (16432): Guest Log: Running cvmfs_config stat atlas.cern.ch
2023-05-03 12:17:19 (16432): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2023-05-03 12:17:19 (16432): Guest Log: 2.6.3.0 1659 0 32232 118564 4 1 3116374 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2023-05-03 12:17:19 (16432): Guest Log: copied the webapp to /var/www
2023-05-03 12:17:20 (16432): Guest Log: ATHENA_PROC_NUMBER=8
2023-05-03 12:17:20 (16432): Guest Log: ATHENA_CORE_NUMBER=8
2023-05-03 12:17:20 (16432): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2023-05-03 12:17:20 (16432): Guest Log:  *** Starting ATLAS job. (PandaID=5837839551 taskID=NULL&cor) ***
2023-05-03 12:31:23 (16432): Guest Log:  *** Job finished ***
2023-05-03 12:31:23 (16432): Guest Log:  *** The last 20 lines of the pilot log: ***
2023-05-03 12:31:23 (16432): Guest Log:  *** Error codes and diagnostics ***
2023-05-03 12:31:23 (16432): Guest Log:     "exeErrorCode": 0,
2023-05-03 12:31:23 (16432): Guest Log:     "exeErrorDiag": "",
2023-05-03 12:31:23 (16432): Guest Log:     "pilotErrorCode": 1305,
2023-05-03 12:31:23 (16432): Guest Log:     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute 2023-05-03 10:26:07,393 CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a SIGSEGV signal (exit code 139)",
2023-05-03 12:31:23 (16432): Guest Log:  *** Listing of results directory ***
2023-05-03 12:31:23 (16432): Guest Log: total 3628
2023-05-03 12:31:23 (16432): Guest Log: -rwx------. 1 atlas atlas   27542 May  3 10:12 runpilot2-wrapper.sh
2023-05-03 12:31:23 (16432): Guest Log: -rw-r--r--. 1 atlas atlas    4388 May  3 10:12 queuedata.json
2023-05-03 12:31:23 (16432): Guest Log: -rw-------. 1 atlas atlas  394500 May  3 10:12 pilot3.tar.gz
2023-05-03 12:31:23 (16432): Guest Log: -rwxr-xr-x. 1 atlas atlas   17604 May  3 10:17 start_atlas.sh
2023-05-03 12:31:23 (16432): Guest Log: -rwxr-xr-x. 1 atlas atlas  405354 May  3 10:17 input.tar.gz
2023-05-03 12:31:23 (16432): Guest Log: -rwxr-xr-x. 1 atlas atlas    9050 May  3 10:17 init_data.xml
2023-05-03 12:31:23 (16432): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 May  3 10:17 EVNT.04972714._000027.pool.root.1 -> /data/./ATLAS.root_0
2023-05-03 12:31:23 (16432): Guest Log: -rw-r--r--. 1 atlas atlas    2683 May  3 10:17 pandaJob.out
2023-05-03 12:31:23 (16432): Guest Log: -rw-------. 1 atlas atlas     424 May  3 10:17 setup.sh.local
2023-05-03 12:31:23 (16432): Guest Log: -rw-------. 1 atlas atlas 1013612 May  3 10:17 agis_schedconf.cvmfs.json
2023-05-03 12:31:23 (16432): Guest Log: -rw-------. 1 atlas atlas 1441951 May  3 10:18 cric_ddmendpoints.json
2023-05-03 12:31:23 (16432): Guest Log: drwx------. 4 atlas atlas     267 May  3 10:19 pilot3
2023-05-03 12:31:23 (16432): Guest Log: -rw-------. 1 atlas atlas    1011 May  3 10:26 memory_monitor_summary.json
2023-05-03 12:31:23 (16432): Guest Log: -rw-------. 1 atlas atlas   70846 May  3 10:26 79ad1b38-850a-46d5-8357-7b098efd3526_33121.1.job.log.tgz
2023-05-03 12:31:23 (16432): Guest Log: -rw-------. 1 atlas atlas    7773 May  3 10:31 heartbeat.json
2023-05-03 12:31:23 (16432): Guest Log: -rw-------. 1 atlas atlas    3022 May  3 10:31 pilotlog.txt
2023-05-03 12:31:23 (16432): Guest Log: -rw-------. 1 atlas atlas   79658 May  3 10:31 79ad1b38-850a-46d5-8357-7b098efd3526_33121.1.job.log
2023-05-03 12:31:23 (16432): Guest Log: -rw-------. 1 atlas atlas     227 May  3 10:31 output.list
2023-05-03 12:31:23 (16432): Guest Log: -rw-r--r--. 1 atlas atlas     686 May  3 10:31 runtime_log
2023-05-03 12:31:23 (16432): Guest Log: -rw-------. 1 atlas atlas  174080 May  3 10:31 result.tar.gz
2023-05-03 12:31:23 (16432): Guest Log: -rw-r--r--. 1 atlas atlas   11350 May  3 10:31 runtime_log.err
2023-05-03 12:31:23 (16432): Guest Log: -rw-------. 1 atlas atlas     632 May  3 10:31 9qJNDmUeOE3n7Olcko1bjSoqABFKDmABFKDm7AsVDmimIKDmoy7Bcm.diag
2023-05-03 12:31:23 (16432): Guest Log: Looking for outputfile output.1.79ad1b38-850a-46d5-8357-7b098efd3526_33121.pool.root
2023-05-03 12:31:23 (16432): Guest Log: No HITS file was produced
2023-05-03 12:31:23 (16432): Guest Log: Successfully finished the ATLAS job!
2023-05-03 12:31:23 (16432): Guest Log: Copying the results back to the shared directory!
2023-05-03 12:31:23 (16432): Guest Log:  *** Contents of shared directory: ***
2023-05-03 12:31:23 (16432): Guest Log: total 37676
2023-05-03 12:31:23 (16432): Guest Log: -rwxrwxrwx. 1 root root 37965264 May  3 10:16 ATLAS.root_0
2023-05-03 12:31:23 (16432): Guest Log: -rwxrwxrwx. 1 root root     9050 May  3 10:16 init_data.xml
2023-05-03 12:31:23 (16432): Guest Log: -rwxrwxrwx. 1 root root   405354 May  3 10:16 input.tar.gz
2023-05-03 12:31:23 (16432): Guest Log: -rwxrwxrwx. 1 root root   174080 May  3 10:31 result.tar.gz
2023-05-03 12:31:23 (16432): Guest Log: -rwxrwxrwx. 1 root root    17604 May  3 10:16 start_atlas.sh
2023-05-03 12:31:23 (16432): Guest Log:  *** Success! Shutting down the machine. ***
2023-05-03 12:31:23 (16432): VM Completion File Detected.
2023-05-03 12:31:23 (16432): Powering off VM.
2023-05-03 12:31:23 (16432): Successfully stopped VM.
2023-05-03 12:31:23 (16432): Deregistering VM. (boinc_32e2ecb5fa9e36b6, slot#25)
2023-05-03 12:31:23 (16432): Removing network bandwidth throttle group from VM.
2023-05-03 12:31:23 (16432): Removing VM from VirtualBox.
12:31:29 (16432): called boinc_finish(0)

</stderr_txt>
]]>


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