| Name | bI8NDm5iyE3n7Olcko1bjSoqABFKDmABFKDm7AsVDmGuIKDm8yZyJm_0 |
| Workunit | 2304990 |
| Created | 5 May 2023, 0:43:42 UTC |
| Sent | 5 May 2023, 0:49:39 UTC |
| Report deadline | 12 May 2023, 0:49:39 UTC |
| Received | 6 May 2023, 0:26:19 UTC |
| Server state | Over |
| Outcome | Success |
| Client state | Done |
| Exit status | 0 (0x00000000) |
| Computer ID | 1498 |
| Run time | 52 min 29 sec |
| CPU time | 1 min 8 sec |
| Validate state | Valid |
| Credit | 39.93 |
| Device peak FLOPS | 12.99 GFLOPS |
| Application version | ATLAS Simulation v3.01 (native_mt) x86_64-pc-linux-gnu |
| Peak working set size | 794.47 MB |
| Peak swap size | 1.49 GB |
| Peak disk usage | 78.24 MB |
Stderr output
<core_client_version>7.4.25</core_client_version>
<![CDATA[
<stderr_txt>
01:55:06 (2974): wrapper (7.7.26015): starting
01:55:06 (2974): wrapper: running run_atlas (--nthreads 4)
[2023-05-05 01:55:06] Arguments: --nthreads 4
[2023-05-05 01:55:06] Threads: 4
[2023-05-05 01:55:06] Checking for CVMFS
[2023-05-05 01:55:15] Probing /cvmfs/atlas.cern.ch... OK
[2023-05-05 01:55:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2023-05-05 01:55:25] Running cvmfs_config stat atlas.cern.ch
[2023-05-05 01:55:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2023-05-05 01:55:25] 2.9.0.0 3196 0 24872 118632 3 1 2947126 4194304 0 130560 0 0 0.000 824 184 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.100.152:3128 1
[2023-05-05 01:55:25] CVMFS is ok
[2023-05-05 01:55:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2023-05-05 01:55:25] Checking for apptainer binary...
[2023-05-05 01:55:25] Using apptainer found in PATH at /usr/bin/apptainer
[2023-05-05 01:55:25] Running /usr/bin/apptainer --version
[2023-05-05 01:55:25] apptainer version 1.0.3
[2023-05-05 01:55:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2023-05-05 01:55:26] TeeC16
[2023-05-05 01:55:26] apptainer works
[2023-05-05 01:55:26] Set ATHENA_PROC_NUMBER=4
[2023-05-05 01:55:26] Set ATHENA_CORE_NUMBER=4
[2023-05-05 01:55:26] Starting ATLAS job with PandaID=5839267196
[2023-05-05 01:55:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/m/BOINC/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2023-05-05 02:47:33] *** The last 200 lines of the pilot log: ***
[2023-05-05 02:47:33] 2023-05-05 01:45:11,923 | INFO | finished stage-out (of log) for failed payload
[2023-05-05 02:47:33] 2023-05-05 01:45:13,738 | INFO | collecting machine features
[2023-05-05 02:47:33] 2023-05-05 01:45:13,738 | INFO | machine features path does not exist (path="")
[2023-05-05 02:47:33] 2023-05-05 01:45:14,673 | INFO | job 5839267196 has state=failed
[2023-05-05 02:47:33] 2023-05-05 01:45:14,674 | INFO | preparing for final server update for job 5839267196 in state='failed'
[2023-05-05 02:47:33] 2023-05-05 01:45:27,262 | INFO | monitor loop #38: job 0:5839267196 is in state 'failed'
[2023-05-05 02:47:33] 2023-05-05 01:45:27,262 | INFO | will abort job monitoring soon since job state=failed (job is still in queue)
[2023-05-05 02:47:33] 2023-05-05 01:46:13,891 | INFO | collecting machine features
[2023-05-05 02:47:33] 2023-05-05 01:46:13,891 | INFO | machine features path does not exist (path="")
[2023-05-05 02:47:33] 2023-05-05 01:46:28,862 | INFO | monitor loop #39: job 0:5839267196 is in state 'failed'
[2023-05-05 02:47:33] 2023-05-05 01:46:28,862 | INFO | will abort job monitoring soon since job state=failed (job is still in queue)
[2023-05-05 02:47:33] 2023-05-05 01:46:43,967 | INFO | 2991s have passed since pilot start
[2023-05-05 02:47:33] 2023-05-05 01:47:09,750 | INFO | proceeding with final server update
[2023-05-05 02:47:33] 2023-05-05 01:47:09,751 | INFO | pilot will not update the server (heartbeat message will be written to file)
[2023-05-05 02:47:33] 2023-05-05 01:47:09,751 | INFO | job 5839267196 has failed - writing final server update
[2023-05-05 02:47:33] 2023-05-05 01:47:09,751 | WARNING | making sure that job.state is set to failed since a pilot error code is set
[2023-05-05 02:47:33] 2023-05-05 01:47:09,751 | WARNING | format EVNTtoHITS has no such key: dbData
[2023-05-05 02:47:33] 2023-05-05 01:47:09,752 | WARNING | format EVNTtoHITS has no such key: dbTime
[2023-05-05 02:47:33] 2023-05-05 01:47:09,752 | INFO | collecting machine features
[2023-05-05 02:47:33] 2023-05-05 01:47:09,752 | INFO | machine features path does not exist (path="")
[2023-05-05 02:47:33] 2023-05-05 01:47:09,752 | INFO | collecting job features
[2023-05-05 02:47:33] 2023-05-05 01:47:09,752 | INFO | job features path does not exist (path="")
[2023-05-05 02:47:33] 2023-05-05 01:47:09,753 | INFO | fitting pss+swap vs Time
[2023-05-05 02:47:33] 2023-05-05 01:47:09,754 | INFO | current memory leak: 241.23 B/s (using 29 data points, chi2=2.41)
[2023-05-05 02:47:33] 2023-05-05 01:47:09,754 | INFO | payload/TRF did not report the number of read events
[2023-05-05 02:47:33] 2023-05-05 01:47:09,775 | INFO | executing command: lscpu
[2023-05-05 02:47:33] 2023-05-05 01:47:09,797 | INFO | found 2 cores (2 cores per socket, 1 sockets)
[2023-05-05 02:47:33] 2023-05-05 01:47:09,797 | INFO | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2023-05-05 02:47:33] 2023-05-05 01:47:09,827 | INFO | using path: /home/m/BOINC/slots/0/PanDA_Pilot-5839267196/memory_monitor_summary.json (trf name=prmon)
[2023-05-05 02:47:33] 2023-05-05 01:47:09,829 | INFO | extracted standard info from prmon json
[2023-05-05 02:47:33] 2023-05-05 01:47:09,829 | INFO | extracted standard memory fields from prmon json
[2023-05-05 02:47:33] 2023-05-05 01:47:09,829 | INFO | ..............................
[2023-05-05 02:47:33] 2023-05-05 01:47:09,830 | INFO | . Timing measurements:
[2023-05-05 02:47:33] 2023-05-05 01:47:09,830 | INFO | . get job = 69 s
[2023-05-05 02:47:33] 2023-05-05 01:47:09,830 | INFO | . initial setup = 74 s
[2023-05-05 02:47:33] 2023-05-05 01:47:09,830 | INFO | . payload setup = 313 s
[2023-05-05 02:47:33] 2023-05-05 01:47:09,830 | INFO | . stage-in = 54 s
[2023-05-05 02:47:33] 2023-05-05 01:47:09,830 | INFO | . payload execution = 2167 s
[2023-05-05 02:47:33] 2023-05-05 01:47:09,830 | INFO | . stage-out = 204 s
[2023-05-05 02:47:33] 2023-05-05 01:47:09,831 | INFO | ..............................
[2023-05-05 02:47:33] 2023-05-05 01:47:09,831 | INFO | building log extracts (sent to the server as 'pilotLog')
[2023-05-05 02:47:33] 2023-05-05 01:47:09,831 | INFO | executing command: tail -n 20 /home/m/BOINC/slots/0/PanDA_Pilot-5839267196/pilotlog.txt
[2023-05-05 02:47:33] 2023-05-05 01:47:09,845 | WARNING | detected the following tail of warning/fatal messages in the pilot log:
[2023-05-05 02:47:33] - Log from pilotlog.txt -
[2023-05-05 02:47:33] 2023-05-05 01:47:09,753 | INFO | fitting pss+swap vs Time
[2023-05-05 02:47:33] 2023-05-05 01:47:09,754 | INFO | current memory leak: 241.23 B/s (using 29 data points, chi2=2.41)
[2023-05-05 02:47:33] 2023-05-05 01:47:09,754 | INFO | payload/TRF did not report the number of read events
[2023-05-05 02:47:33] 2023-05-05 01:47:09,775 | INFO | executing command: lscpu
[2023-05-05 02:47:33] 2023-05-05 01:47:09,797 | INFO | found 2 cores (2 cores per socket, 1 sockets)
[2023-05-05 02:47:33] 2023-05-05 01:47:09,797 | INFO | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2023-05-05 02:47:33] 2023-05-05 01:47:09,827 | INFO | using path: /home/m/BOINC/slots/0/PanDA_Pilot-5839267196/memory_monitor_summary.json (trf name=prmon)
[2023-05-05 02:47:33] 2023-05-05 01:47:09,829 | INFO | extracted standard info from prmon json
[2023-05-05 02:47:33] 2023-05-05 01:47:09,829 | INFO | extracted standard memory fields from prmon json
[2023-05-05 02:47:33] 2023-05-05 01:47:09,829 | INFO | ..............................
[2023-05-05 02:47:33] 2023-05-05 01:47:09,830 | INFO | . Timing measurements:
[2023-05-05 02:47:33] 2023-05-05 01:47:09,830 | INFO | . get job = 69 s
[2023-05-05 02:47:33] 2023-05-05 01:47:09,830 | INFO | . initial setup = 74 s
[2023-05-05 02:47:33] 2023-05-05 01:47:09,830 | INFO | . payload setup = 313 s
[2023-05-05 02:47:33] 2023-05-05 01:47:09,830 | INFO | . stage-in = 54 s
[2023-05-05 02:47:33] 2023-05-05 01:47:09,830 | INFO | . payload execution = 2167 s
[2023-05-05 02:47:33] 2023-05-05 01:47:09,830 | INFO | . stage-out = 204 s
[2023-05-05 02:47:33] 2023-05-05 01:47:09,831 | INFO | ..............................
[2023-05-05 02:47:33] 2023-05-05 01:47:09,831 | INFO | building log extracts (sent to the server as 'pilotLog')
[2023-05-05 02:47:33] 2023-05-05 01:47:09,831 | INFO | executing command: tail -n 20 /home/m/BOINC/slots/0/PanDA_Pilot-5839267196/pilotlog.txt
[2023-05-05 02:47:33] 2023-05-05 01:47:09,845 | WARNING |
[2023-05-05 02:47:33] [begin log extracts]
[2023-05-05 02:47:33] - Log from pilotlog.txt -
[2023-05-05 02:47:33] 2023-05-05 01:47:09,753 | INFO | fitting pss+swap vs Time
[2023-05-05 02:47:33] 2023-05-05 01:47:09,754 | INFO | current memory leak: 241.23 B/s (using 29 data points, chi2=2.41)
[2023-05-05 02:47:33] 2023-05-05 01:47:09,754 | INFO | payload/TRF did not report the number of read events
[2023-05-05 02:47:33] 2023-05-05 01:47:09,775 | INFO | executing command: lscpu
[2023-05-05 02:47:33] 2023-05-05 01:47:09,797 | INFO | found 2 cores (2 cores per socket, 1 sockets)
[2023-05-05 02:47:33] 2023-05-05 01:47:09,797 | INFO | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2023-05-05 02:47:33] 2023-05-05 01:47:09,827 | INFO | using path: /home/m/BOINC/slots/0/PanDA_Pilot-5839267196/memory_monitor_summary.json (trf name=prmon)
[2023-05-05 02:47:33] 2023-05-05 01:47:09,829 | INFO | extracted standard info from prmon json
[2023-05-05 02:47:33] 2023-05-05 01:47:09,829 | INFO | extracted standard memory fields from prmon json
[2023-05-05 02:47:33] 2023-05-05 01:47:09,829 | INFO | ..............................
[2023-05-05 02:47:33] 2023-05-05 01:47:09,830 | INFO | . Timing measurements:
[2023-05-05 02:47:33] 2023-05-05 01:47:09,830 | INFO | . get job = 69 s
[2023-05-05 02:47:33] 2023-05-05 01:47:09,830 | INFO | . initial setup = 74 s
[2023-05-05 02:47:33] 2023-05-05 01:47:09,830 | INFO | . payload setup = 313 s
[2023-05-05 02:47:33] 2023-05-05 01:47:09,830 | INFO | . stage-in = 54 s
[2023-05-05 02:47:33] 2023-05-05 01:47:09,830 | INFO | . payload execution = 2167 s
[2023-05-05 02:47:33] 2023-05-05 01:47:09,830 | INFO | . stage-out = 204 s
[2023-05-05 02:47:33] 2023-05-05 01:47:09,831 | INFO | ..............................
[2023-05-05 02:47:33] 2023-05-05 01:47:09,831 | INFO | building log extracts (sent to the server as 'pilotLog')
[2023-05-05 02:47:33] 2023-05-05 01:47:09,831 | INFO | executing command: tail -n 20 /home/m/BOINC/slots/0/PanDA_Pilot-5839267196/pilotlog.txt
[2023-05-05 02:47:33] [end log extracts]
[2023-05-05 02:47:33] 2023-05-05 01:47:09,845 | WARNING | pilotErrorCodes = [1305, 1328] (will report primary/first error code)
[2023-05-05 02:47:33] 2023-05-05 01:47:09,845 | WARNING | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute 2023-05-05 02:41:36,980 CRITICAL Transform executor raised TransformValidationExcep
[2023-05-05 02:47:33] 2023-05-05 01:47:10,034 | INFO |
[2023-05-05 02:47:33] 2023-05-05 01:47:10,034 | INFO | job summary report
[2023-05-05 02:47:33] 2023-05-05 01:47:10,034 | INFO | --------------------------------------------------
[2023-05-05 02:47:33] 2023-05-05 01:47:10,034 | INFO | PanDA job id: 5839267196
[2023-05-05 02:47:33] 2023-05-05 01:47:10,034 | INFO | task id: NULL
[2023-05-05 02:47:33] 2023-05-05 01:47:10,035 | INFO | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2023-05-05 02:41:36,980 CRITICAL Transform executor raised TransformValidationExceptio
[2023-05-05 02:47:33] 2023-05-05 01:47:10,035 | INFO | error 2/2: 1328: Invalid memory reference or a segmentation fault in payload: EVNTtoHITS got a SIGSEGV signal (exit code 139) (job report)
[2023-05-05 02:47:33] 2023-05-05 01:47:10,035 | INFO | pilot error code: 1328
[2023-05-05 02:47:33] 2023-05-05 01:47:10,035 | INFO | pilot error diag: Invalid memory reference or a segmentation fault in payload: EVNTtoHITS got a SIGSEGV signal (exit code 139) (job report)
[2023-05-05 02:47:33] 2023-05-05 01:47:10,035 | INFO | status: LOG_TRANSFER = DONE
[2023-05-05 02:47:33] 2023-05-05 01:47:10,035 | INFO | pilot state: failed
[2023-05-05 02:47:33] 2023-05-05 01:47:10,035 | INFO | transexitcode: 65
[2023-05-05 02:47:33] 2023-05-05 01:47:10,035 | INFO | exeerrorcode: 0
[2023-05-05 02:47:33] 2023-05-05 01:47:10,035 | INFO | exeerrordiag:
[2023-05-05 02:47:33] 2023-05-05 01:47:10,036 | INFO | exitcode: 65
[2023-05-05 02:47:33] 2023-05-05 01:47:10,036 | INFO | exitmsg: EVNTtoHITS got a SIGSEGV signal (exit code 139)
[2023-05-05 02:47:33] 2023-05-05 01:47:10,036 | INFO | cpuconsumptiontime: 80 s
[2023-05-05 02:47:33] 2023-05-05 01:47:10,036 | INFO | nevents: 0
[2023-05-05 02:47:33] 2023-05-05 01:47:10,036 | INFO | neventsw: 0
[2023-05-05 02:47:33] 2023-05-05 01:47:10,036 | INFO | pid: 9876
[2023-05-05 02:47:33] 2023-05-05 01:47:10,036 | INFO | pgrp: 9876
[2023-05-05 02:47:33] 2023-05-05 01:47:10,036 | INFO | corecount: 4
[2023-05-05 02:47:33] 2023-05-05 01:47:10,036 | INFO | event service: False
[2023-05-05 02:47:33] 2023-05-05 01:47:10,036 | INFO | sizes: {0: 2575018, 1: 2575873, 12: 2576019, 22: 2576047, 33: 2576075, 43: 2576103, 54: 2576259, 56: 2576347, 65: 2576375, 2484: 2597667, 2689: 2601930, 2692: 2602
[2023-05-05 02:47:33] 2023-05-05 01:47:10,036 | INFO | --------------------------------------------------
[2023-05-05 02:47:33] 2023-05-05 01:47:10,037 | INFO |
[2023-05-05 02:47:33] 2023-05-05 01:47:10,037 | INFO | executing command: ls -lF /home/m/BOINC/slots/0
[2023-05-05 02:47:33] 2023-05-05 01:47:10,059 | INFO | queue jobs had 0 job(s) [purged]
[2023-05-05 02:47:33] 2023-05-05 01:47:10,059 | INFO | queue payloads had 0 job(s) [purged]
[2023-05-05 02:47:33] 2023-05-05 01:47:10,059 | INFO | queue data_in had 0 job(s) [purged]
[2023-05-05 02:47:33] 2023-05-05 01:47:10,059 | INFO | queue data_out had 0 job(s) [purged]
[2023-05-05 02:47:33] 2023-05-05 01:47:10,059 | INFO | queue current_data_in had 0 job(s) [purged]
[2023-05-05 02:47:33] 2023-05-05 01:47:10,060 | INFO | queue validated_jobs had 0 job(s) [purged]
[2023-05-05 02:47:33] 2023-05-05 01:47:10,060 | INFO | queue validated_payloads had 0 job(s) [purged]
[2023-05-05 02:47:33] 2023-05-05 01:47:10,060 | INFO | queue monitored_payloads had 0 job(s) [purged]
[2023-05-05 02:47:33] 2023-05-05 01:47:10,060 | INFO | queue finished_jobs had 0 job(s) [purged]
[2023-05-05 02:47:33] 2023-05-05 01:47:10,060 | INFO | queue finished_payloads had 0 job(s) [purged]
[2023-05-05 02:47:33] 2023-05-05 01:47:10,060 | INFO | queue finished_data_in had 1 job(s) [purged]
[2023-05-05 02:47:33] 2023-05-05 01:47:10,060 | INFO | queue finished_data_out had 0 job(s) [purged]
[2023-05-05 02:47:33] 2023-05-05 01:47:10,061 | INFO | queue failed_jobs had 0 job(s) [purged]
[2023-05-05 02:47:33] 2023-05-05 01:47:10,061 | INFO | queue failed_payloads had 0 job(s) [purged]
[2023-05-05 02:47:33] 2023-05-05 01:47:10,061 | INFO | queue failed_data_in had 0 job(s) [purged]
[2023-05-05 02:47:33] 2023-05-05 01:47:10,061 | INFO | queue failed_data_out had 0 job(s) [purged]
[2023-05-05 02:47:33] 2023-05-05 01:47:10,061 | INFO | queue completed_jobs had 0 job(s) [purged]
[2023-05-05 02:47:33] 2023-05-05 01:47:10,061 | INFO | queue completed_jobids has 1 job(s)
[2023-05-05 02:47:33] 2023-05-05 01:47:10,061 | INFO | queue realtimelog_payloads had 0 job(s) [purged]
[2023-05-05 02:47:33] 2023-05-05 01:47:10,062 | INFO | queue messages had 0 job(s) [purged]
[2023-05-05 02:47:33] 2023-05-05 01:47:10,062 | INFO | job 5839267196 has completed (purged errors)
[2023-05-05 02:47:33] 2023-05-05 01:47:10,062 | INFO | overall cleanup function is called
[2023-05-05 02:47:33] 2023-05-05 01:47:11,069 | INFO | --- collectZombieJob: --- 10, [9876]
[2023-05-05 02:47:33] 2023-05-05 01:47:11,069 | INFO | zombie collector trying to kill pid 9876
[2023-05-05 02:47:33] 2023-05-05 01:47:11,069 | INFO | harmless exception when collecting zombies: [Errno 10] No child processes
[2023-05-05 02:47:33] 2023-05-05 01:47:12,075 | INFO | collected zombie processes
[2023-05-05 02:47:33] 2023-05-05 01:47:12,075 | INFO | will now attempt to kill all subprocesses of pid=9876
[2023-05-05 02:47:33] 2023-05-05 01:47:12,117 | INFO | process IDs to be killed: [9876] (in reverse order)
[2023-05-05 02:47:33] 2023-05-05 01:47:12,155 | WARNING | found no corresponding commands to process id(s)
[2023-05-05 02:47:33] 2023-05-05 01:47:12,155 | INFO | Do not look for orphan processes in BOINC jobs
[2023-05-05 02:47:33] 2023-05-05 01:47:12,155 | INFO | ready for new job
[2023-05-05 02:47:33] 2023-05-05 01:47:12,155 | INFO | pilot has finished with previous job - re-establishing logging
[2023-05-05 02:47:33] 2023-05-05 01:47:12,156 | INFO | ****************************************
[2023-05-05 02:47:33] 2023-05-05 01:47:12,156 | INFO | *** PanDA Pilot version 3.5.1 (17) ***
[2023-05-05 02:47:33] 2023-05-05 01:47:12,156 | INFO | ****************************************
[2023-05-05 02:47:33] 2023-05-05 01:47:12,156 | INFO |
[2023-05-05 02:47:33] 2023-05-05 01:47:12,174 | INFO | architecture information:
[2023-05-05 02:47:33] 2023-05-05 01:47:12,268 | INFO |
[2023-05-05 02:47:33] LSB Version: :core-4.1-amd64:core-4.1-noarch
[2023-05-05 02:47:33] Distributor ID: CentOS
[2023-05-05 02:47:33] Description: CentOS Linux release 7.9.2009 (Core)
[2023-05-05 02:47:33] Release: 7.9.2009
[2023-05-05 02:47:33] Codename: Core
[2023-05-05 02:47:33] 2023-05-05 01:47:12,268 | INFO | ****************************************
[2023-05-05 02:47:33] 2023-05-05 01:47:12,771 | INFO | executing command: df -mP /home/m/BOINC/slots/0
[2023-05-05 02:47:33] 2023-05-05 01:47:12,787 | INFO | sufficient remaining disk space (423207370752 B)
[2023-05-05 02:47:33] 2023-05-05 01:47:12,787 | WARNING | since timefloor is set to 0, pilot was only allowed to run one job
[2023-05-05 02:47:33] 2023-05-05 01:47:12,788 | INFO | [job] retrieve thread has finished
[2023-05-05 02:47:33] 2023-05-05 01:47:12,788 | WARNING | data:copytool_out:received graceful stop - abort after this iteration
[2023-05-05 02:47:33] 2023-05-05 01:47:13,014 | INFO | [payload] failed_post thread has finished
[2023-05-05 02:47:33] 2023-05-05 01:47:13,045 | INFO | [monitor] control thread has ended
[2023-05-05 02:47:33] 2023-05-05 01:47:13,102 | INFO | [payload] execute_payloads thread has finished
[2023-05-05 02:47:33] 2023-05-05 01:47:13,347 | INFO | [job] create_data_payload thread has finished
[2023-05-05 02:47:33] 2023-05-05 01:47:13,425 | INFO | [payload] validate_pre thread has finished
[2023-05-05 02:47:33] 2023-05-05 01:47:13,529 | INFO | [job] validate thread has finished
[2023-05-05 02:47:33] 2023-05-05 01:47:13,661 | INFO | [data] control thread has finished
[2023-05-05 02:47:33] 2023-05-05 01:47:13,731 | INFO | [job] control thread has finished
[2023-05-05 02:47:33] 2023-05-05 01:47:13,789 | INFO | [data] copytool_out thread has finished
[2023-05-05 02:47:33] 2023-05-05 01:47:14,107 | INFO | [payload] validate_post thread has finished
[2023-05-05 02:47:33] 2023-05-05 01:47:14,136 | INFO | [payload] control thread has finished
[2023-05-05 02:47:33] 2023-05-05 01:47:14,289 | INFO | [data] copytool_in thread has finished
[2023-05-05 02:47:33] 2023-05-05 01:47:14,917 | WARNING | job:queue_monitor:received graceful stop - abort after this iteration
[2023-05-05 02:47:33] 2023-05-05 01:47:14,917 | INFO | [job] queue monitor thread has finished
[2023-05-05 02:47:33] 2023-05-05 01:47:15,067 | WARNING | data:queue_monitoring:received graceful stop - abort after this iteration
[2023-05-05 02:47:33] 2023-05-05 01:47:18,067 | INFO | [data] queue_monitor thread has finished
[2023-05-05 02:47:33] 2023-05-05 01:47:30,462 | WARNING | no jobs in monitored_payloads queue (waited for 62 s)
[2023-05-05 02:47:33] 2023-05-05 01:47:30,462 | INFO | [job] job monitor thread has finished
[2023-05-05 02:47:33] 2023-05-05 01:47:32,162 | INFO | job.realtimelogging is not enabled
[2023-05-05 02:47:33] 2023-05-05 01:47:32,162 | INFO | [payload] run_realtimelog thread has finished
[2023-05-05 02:47:33] 2023-05-05 01:47:33,072 | INFO | end of generic workflow (traces error code: 0)
[2023-05-05 02:47:33] 2023-05-05 01:47:33,072 | INFO | traces error code: 0
[2023-05-05 02:47:33] 2023-05-05 01:47:33,073 | INFO | pilot has finished
[2023-05-05 02:47:33] 2023-05-05 01:47:33,127 [wrapper] ==== pilot stdout END ====
[2023-05-05 02:47:33] 2023-05-05 01:47:33,132 [wrapper] ==== wrapper stdout RESUME ====
[2023-05-05 02:47:33] 2023-05-05 01:47:33,137 [wrapper] pilotpid: 6735
[2023-05-05 02:47:33] 2023-05-05 01:47:33,142 [wrapper] Pilot exit status: 0
[2023-05-05 02:47:33] 2023-05-05 01:47:33,153 [wrapper] pandaids: 5839267196
[2023-05-05 02:47:33] 2023-05-05 01:47:33,160 [wrapper] apfmon messages muted
[2023-05-05 02:47:33] 2023-05-05 01:47:33,165 [wrapper] Test setup, not cleaning
[2023-05-05 02:47:33] 2023-05-05 01:47:33,168 [wrapper] ==== wrapper stdout END ====
[2023-05-05 02:47:33] 2023-05-05 01:47:33,173 [wrapper] ==== wrapper stderr END ====
[2023-05-05 02:47:33] 2023-05-05 01:47:33,181 [wrapper] wrapperexiting ec=0, duration=3126
[2023-05-05 02:47:33] 2023-05-05 01:47:33,185 [wrapper] apfmon messages muted
[2023-05-05 02:47:33] *** Error codes and diagnostics ***
[2023-05-05 02:47:33] "exeErrorCode": 0,
[2023-05-05 02:47:33] "exeErrorDiag": "",
[2023-05-05 02:47:33] "pilotErrorCode": 1305,
[2023-05-05 02:47:33] "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute 2023-05-05 02:41:36,980 CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a SIGSEGV signal (exit code 139)",
[2023-05-05 02:47:33] *** Listing of results directory ***
[2023-05-05 02:47:33] total 40476
[2023-05-05 02:47:33] -rw-r--r-- 1 m m 393247 May 5 01:31 pilot3.tar.gz
[2023-05-05 02:47:33] -rw-r--r-- 1 m m 4388 May 5 01:40 queuedata.json
[2023-05-05 02:47:33] -rwx------ 1 m m 27542 May 5 01:43 runpilot2-wrapper.sh
[2023-05-05 02:47:33] -rw-rw-r-- 1 m m 107 May 5 01:55 wrapper_26015_x86_64-pc-linux-gnu
[2023-05-05 02:47:33] -rwxr-xr-x 1 m m 7986 May 5 01:55 run_atlas
[2023-05-05 02:47:33] -rw-rw-r-- 1 m m 112 May 5 01:55 job.xml
[2023-05-05 02:47:33] -rw-r--r-- 2 m m 17604 May 5 01:55 start_atlas.sh
[2023-05-05 02:47:33] drwxrwx--x 2 m m 4096 May 5 01:55 shared
[2023-05-05 02:47:33] -rw-r--r-- 2 m m 403674 May 5 01:55 input.tar.gz
[2023-05-05 02:47:33] -rw-rw-r-- 1 m m 5708 May 5 01:55 init_data.xml
[2023-05-05 02:47:33] -rw-r--r-- 2 m m 37498453 May 5 01:55 EVNT.04972714._000025.pool.root.1
[2023-05-05 02:47:33] -rw-rw-r-- 1 m m 0 May 5 01:55 boinc_lockfile
[2023-05-05 02:47:33] -rw-rw-r-- 1 m m 2747 May 5 01:55 pandaJob.out
[2023-05-05 02:47:33] -rw------- 1 m m 424 May 5 01:55 setup.sh.local
[2023-05-05 02:47:33] -rw------- 1 m m 1444776 May 5 01:58 cric_ddmendpoints.json
[2023-05-05 02:47:33] -rw------- 1 m m 1013149 May 5 01:58 agis_schedconf.cvmfs.json
[2023-05-05 02:47:33] drwx------ 4 m m 4096 May 5 01:59 pilot3
[2023-05-05 02:47:33] -rw------- 1 m m 1017 May 5 02:41 memory_monitor_summary.json
[2023-05-05 02:47:33] -rw------- 1 m m 72728 May 5 02:41 294b648c-ea30-4f0a-898a-36262ce4ae10_30271.1.job.log.tgz
[2023-05-05 02:47:33] -rw-rw-r-- 1 m m 531 May 5 02:41 boinc_task_state.xml
[2023-05-05 02:47:33] -rw------- 1 m m 7380 May 5 02:47 heartbeat.json
[2023-05-05 02:47:33] -rw-rw-r-- 1 m m 24 May 5 02:47 wrapper_checkpoint.txt
[2023-05-05 02:47:33] -rw-rw-r-- 1 m m 8192 May 5 02:47 boinc_mmap_file
[2023-05-05 02:47:33] -rw------- 1 m m 2870 May 5 02:47 pilotlog.txt
[2023-05-05 02:47:33] -rw------- 1 m m 166352 May 5 02:47 294b648c-ea30-4f0a-898a-36262ce4ae10_30271.1.job.log
[2023-05-05 02:47:33] -rw------- 1 m m 227 May 5 02:47 output.list
[2023-05-05 02:47:33] -rw-rw-r-- 1 m m 686 May 5 02:47 runtime_log
[2023-05-05 02:47:33] -rw------- 1 m m 256000 May 5 02:47 result.tar.gz
[2023-05-05 02:47:33] -rw-rw-r-- 1 m m 11324 May 5 02:47 runtime_log.err
[2023-05-05 02:47:33] -rw------- 1 m m 623 May 5 02:47 bI8NDm5iyE3n7Olcko1bjSoqABFKDmABFKDm7AsVDmGuIKDm8yZyJm.diag
[2023-05-05 02:47:33] -rw-rw-r-- 1 m m 22034 May 5 02:47 stderr.txt
[2023-05-05 02:47:33] No HITS result produced
[2023-05-05 02:47:33] *** Contents of shared directory: ***
[2023-05-05 02:47:33] total 37288
[2023-05-05 02:47:33] -rw-r--r-- 2 m m 17604 May 5 01:55 start_atlas.sh
[2023-05-05 02:47:33] -rw-r--r-- 2 m m 403674 May 5 01:55 input.tar.gz
[2023-05-05 02:47:33] -rw-r--r-- 2 m m 37498453 May 5 01:55 ATLAS.root_0
[2023-05-05 02:47:33] -rw------- 1 m m 256000 May 5 02:47 result.tar.gz
02:47:34 (2974): run_atlas exited; CPU time 68.725851
02:47:34 (2974): called boinc_finish(0)
</stderr_txt>
]]>
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