Stderr output

<core_client_version>7.14.2</core_client_version>
<![CDATA[
<stderr_txt>
13:39:49 (1714): wrapper (7.7.26015): starting
13:39:49 (1714): wrapper: running run_atlas (--nthreads 2)
[2023-05-10 13:39:49] Arguments: --nthreads 2
[2023-05-10 13:39:49] Threads: 2
[2023-05-10 13:39:49] Checking for CVMFS
[2023-05-10 13:39:49] Probing /cvmfs/atlas.cern.ch... OK
[2023-05-10 13:39:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2023-05-10 13:39:52] Running cvmfs_config stat atlas.cern.ch
[2023-05-10 13:39:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2023-05-10 13:39:52] 2.10.1.0 25506 3035 47140 118831 1 84 2667631 4194304 0 130560 0 9237026 99.040 13625284 4775 http://cernvmfs.gridpp.rl.ac.uk:8000/cvmfs/atlas.cern.ch DIRECT 1
[2023-05-10 13:39:52] CVMFS is ok
[2023-05-10 13:39:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2023-05-10 13:39:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2023-05-10 13:39:52] Small home clusters do not require a local http proxy but it is suggested if
[2023-05-10 13:39:52] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2023-05-10 13:39:52] Further information can be found at the LHC@home message board.
[2023-05-10 13:39:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2023-05-10 13:39:52] Checking for apptainer binary...
[2023-05-10 13:39:52] apptainer is not installed, using version from CVMFS
[2023-05-10 13:39:52] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2023-05-10 13:39:53] vps-3dca72ac
[2023-05-10 13:39:53] apptainer works
[2023-05-10 13:39:53] Set ATHENA_PROC_NUMBER=2
[2023-05-10 13:39:53] Set ATHENA_CORE_NUMBER=2
[2023-05-10 13:39:53] Starting ATLAS job with PandaID=5842928390
[2023-05-10 13:39:53] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2023-05-10 13:59:19]  *** The last 200 lines of the pilot log: ***
[2023-05-10 13:59:19] 2023-05-10 11:57:53,213 | WARNING  | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: 
[2023-05-10 13:59:19] 2023-05-10 11:57:53,214 | WARNING  | cache file=/var/lib/boinc-client/slots/1/agis_ddmendpoints.agis.ALL.json is not available: [Errno 2] No such file or directory: '/var/lib/boinc-client/slots/1/agis
[2023-05-10 13:59:19] 2023-05-10 11:57:53,263 | INFO     | Resolved protocol to be used for transfer: '{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}': l
[2023-05-10 13:59:19] 2023-05-10 11:57:53,263 | INFO     | ready to transfer (stage-out) files: [ accessmode=
[2023-05-10 13:59:19]  activity=['pl', 'pw', 'w', 'default']
[2023-05-10 13:59:19]  allow_lan=True
[2023-05-10 13:59:19]  allow_wan=False
[2023-05-10 13:59:19]  checkinputsize=True
[2023-05-10 13:59:19]  checksum={'adler32': '646163c5'}
[2023-05-10 13:59:19]  dataset=hc_test.gangarbt.hc20266118.tid1184.BOINC-TEST.94
[2023-05-10 13:59:19]  ddm_activity=['write_lan', 'write_wan']
[2023-05-10 13:59:19]  ddmendpoint=NDGF-T1_DATADISK
[2023-05-10 13:59:19]  direct_access_lan=False
[2023-05-10 13:59:19]  direct_access_wan=False
[2023-05-10 13:59:19]  domain=
[2023-05-10 13:59:19]  filesize=426671
[2023-05-10 13:59:19]  filetype=log
[2023-05-10 13:59:19]  guid=7630bd1d-1833-489f-a7b5-4c20ffb4d99a
[2023-05-10 13:59:19]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2023-05-10 13:59:19]  is_tar=False
[2023-05-10 13:59:19]  lfn=abc806f6-1ee1-455f-a224-7d83359b3fd4_17231.1.job.log.tgz
[2023-05-10 13:59:19]  mtime=0
[2023-05-10 13:59:19]  protocol_id=None
[2023-05-10 13:59:19]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2023-05-10 13:59:19]  replicas=None
[2023-05-10 13:59:19]  scope=hc_test
[2023-05-10 13:59:19]  status=None
[2023-05-10 13:59:19]  status_code=0
[2023-05-10 13:59:19]  storage_token=
[2023-05-10 13:59:19]  surl=/var/lib/boinc-client/slots/1/PanDA_Pilot-5842928390/abc806f6-1ee1-455f-a224-7d83359b3fd4_17231.1.job.log.tgz
[2023-05-10 13:59:19]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/6e/c7/abc806f6-1ee1-455f-a224-7d83359b3fd4_17231.1.job.log.tgz
[2023-05-10 13:59:19]  workdir=None
[2023-05-10 13:59:19] ]
[2023-05-10 13:59:19] 2023-05-10 11:57:53,265 | INFO     | [attempt=1/3] loading data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json
[2023-05-10 13:59:19] 2023-05-10 11:57:53,366 | WARNING  | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: 
[2023-05-10 13:59:19] 2023-05-10 11:57:53,366 | INFO     | will try again after 45s..
[2023-05-10 13:59:19] 2023-05-10 11:57:54,344 | INFO     | 1069s have passed since pilot start
[2023-05-10 13:59:19] 2023-05-10 11:58:10,590 | INFO     | monitor loop #12: job 0:5842928390 is in state 'stageout'
[2023-05-10 13:59:19] 2023-05-10 11:58:10,591 | INFO     | payload log (log.HITSMergeAthenaMP0) within allowed size limit (2147483648 B): 134741 B
[2023-05-10 13:59:19] 2023-05-10 11:58:10,591 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 1371524 B
[2023-05-10 13:59:19] 2023-05-10 11:58:10,591 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 13412 B
[2023-05-10 13:59:19] 2023-05-10 11:58:10,592 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2023-05-10 13:59:19] 2023-05-10 11:58:10,609 | INFO     | sufficient remaining disk space (57463013376 B)
[2023-05-10 13:59:19] 2023-05-10 11:58:10,610 | INFO     | work directory size check will use 61362667520 B as a max limit (10% grace limit added)
[2023-05-10 13:59:19] 2023-05-10 11:58:10,611 | INFO     | size of work directory /var/lib/boinc-client/slots/1/PanDA_Pilot-5842928390: 2941346 B (within 61362667520 B limit)
[2023-05-10 13:59:19] 2023-05-10 11:58:10,611 | INFO     | pfn file=/var/lib/boinc-client/slots/1/PanDA_Pilot-5842928390/output.1.abc806f6-1ee1-455f-a224-7d83359b3fd4_17231.pool.root does not exist (skip from workdir size 
[2023-05-10 13:59:19] 2023-05-10 11:58:10,612 | INFO     | total size of present files: 0 B (workdir size: 2941346 B)
[2023-05-10 13:59:19] 2023-05-10 11:58:10,612 | INFO     | output file size check: skipping output file /var/lib/boinc-client/slots/1/PanDA_Pilot-5842928390/output.1.abc806f6-1ee1-455f-a224-7d83359b3fd4_17231.pool.root sin
[2023-05-10 13:59:19] 2023-05-10 11:58:10,642 | INFO     | number of running child processes to parent process 8672: 1
[2023-05-10 13:59:19] 2023-05-10 11:58:10,643 | INFO     | maximum number of monitored processes: 7
[2023-05-10 13:59:19] 2023-05-10 11:58:24,408 | INFO     | collecting machine features
[2023-05-10 13:59:19] 2023-05-10 11:58:24,409 | INFO     | machine features path does not exist (path="")
[2023-05-10 13:59:19] 2023-05-10 11:58:38,437 | INFO     | [attempt=2/3] loading data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json
[2023-05-10 13:59:19] 2023-05-10 11:58:38,546 | WARNING  | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: 
[2023-05-10 13:59:19] 2023-05-10 11:58:38,546 | INFO     | will try again after 24s..
[2023-05-10 13:59:19] 2023-05-10 11:59:02,643 | INFO     | [attempt=3/3] loading data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json
[2023-05-10 13:59:19] 2023-05-10 11:59:02,768 | WARNING  | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: 
[2023-05-10 13:59:19] 2023-05-10 11:59:02,769 | WARNING  | cache file=/var/lib/boinc-client/slots/1/agis_ddmendpoints.agis.ALL.json is not available: [Errno 2] No such file or directory: '/var/lib/boinc-client/slots/1/agis
[2023-05-10 13:59:19] 2023-05-10 11:59:02,820 | INFO     | transferring file abc806f6-1ee1-455f-a224-7d83359b3fd4_17231.1.job.log.tgz from /var/lib/boinc-client/slots/1/PanDA_Pilot-5842928390/abc806f6-1ee1-455f-a224-7d8335
[2023-05-10 13:59:19] 2023-05-10 11:59:02,820 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/1/PanDA_Pilot-5842928390/abc806f6-1ee1-455f-a224-7d83359b3fd4_17231.1.job.log.tgz /var/lib/boinc-cli
[2023-05-10 13:59:19] 2023-05-10 11:59:02,843 | INFO     | Adding to output.list: abc806f6-1ee1-455f-a224-7d83359b3fd4_17231.1.job.log.tgz davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/6e/c7/abc806f6-1ee1-
[2023-05-10 13:59:19] 2023-05-10 11:59:02,844 | INFO     | executing command: ps aux -q 5268
[2023-05-10 13:59:19] 2023-05-10 11:59:02,867 | INFO     | summary of transferred files:
[2023-05-10 13:59:19] 2023-05-10 11:59:02,868 | INFO     |  -- lfn=abc806f6-1ee1-455f-a224-7d83359b3fd4_17231.1.job.log.tgz, status_code=0, status=transferred
[2023-05-10 13:59:19] 2023-05-10 11:59:02,868 | INFO     | stage-out finished correctly
[2023-05-10 13:59:19] 2023-05-10 11:59:02,939 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2023-05-10 13:59:19] 2023-05-10 11:59:03,018 | INFO     | job 5842928390 has state=finished
[2023-05-10 13:59:19] 2023-05-10 11:59:03,019 | INFO     | preparing for final server update for job 5842928390 in state='finished'
[2023-05-10 13:59:19] 2023-05-10 11:59:03,020 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2023-05-10 13:59:19] 2023-05-10 11:59:03,020 | INFO     | job 5842928390 has finished - writing final server update
[2023-05-10 13:59:19] 2023-05-10 11:59:03,021 | INFO     | collecting machine features
[2023-05-10 13:59:19] 2023-05-10 11:59:03,021 | INFO     | machine features path does not exist (path="")
[2023-05-10 13:59:19] 2023-05-10 11:59:03,021 | INFO     | collecting job features
[2023-05-10 13:59:19] 2023-05-10 11:59:03,021 | INFO     | job features path does not exist (path="")
[2023-05-10 13:59:19] 2023-05-10 11:59:03,022 | WARNING  | wrong length of table data, x=[1683719333.0, 1683719394.0], y=[1909388.0, 1810500.0] (must be same and length>=4)
[2023-05-10 13:59:19] 2023-05-10 11:59:03,023 | INFO     | total number of processed events: 2 (read)
[2023-05-10 13:59:19] 2023-05-10 11:59:03,024 | INFO     | executing command: lscpu
[2023-05-10 13:59:19] 2023-05-10 11:59:03,045 | INFO     | found 2 cores (1 cores per socket, 2 sockets)
[2023-05-10 13:59:19] 2023-05-10 11:59:03,046 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2023-05-10 13:59:19] 2023-05-10 11:59:03,079 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-5842928390/memory_monitor_summary.json (trf name=prmon)
[2023-05-10 13:59:19] 2023-05-10 11:59:03,080 | INFO     | extracted standard info from prmon json
[2023-05-10 13:59:19] 2023-05-10 11:59:03,081 | INFO     | extracted standard memory fields from prmon json
[2023-05-10 13:59:19] 2023-05-10 11:59:03,081 | INFO     | ..............................
[2023-05-10 13:59:19] 2023-05-10 11:59:03,081 | INFO     | . Timing measurements:
[2023-05-10 13:59:19] 2023-05-10 11:59:03,081 | INFO     | . get job = 70 s
[2023-05-10 13:59:19] 2023-05-10 11:59:03,081 | INFO     | . initial setup = 76 s
[2023-05-10 13:59:19] 2023-05-10 11:59:03,081 | INFO     | . payload setup = 7 s
[2023-05-10 13:59:19] 2023-05-10 11:59:03,081 | INFO     | . stage-in = 61 s
[2023-05-10 13:59:19] 2023-05-10 11:59:03,081 | INFO     | . payload execution = 544 s
[2023-05-10 13:59:19] 2023-05-10 11:59:03,081 | INFO     | . stage-out = 371 s
[2023-05-10 13:59:19] 2023-05-10 11:59:03,081 | INFO     | ..............................
[2023-05-10 13:59:19] 2023-05-10 11:59:03,154 | INFO     | 
[2023-05-10 13:59:19] 2023-05-10 11:59:03,155 | INFO     | job summary report
[2023-05-10 13:59:19] 2023-05-10 11:59:03,155 | INFO     | --------------------------------------------------
[2023-05-10 13:59:19] 2023-05-10 11:59:03,155 | INFO     | PanDA job id: 5842928390
[2023-05-10 13:59:19] 2023-05-10 11:59:03,155 | INFO     | task id: NULL
[2023-05-10 13:59:19] 2023-05-10 11:59:03,155 | INFO     | errors: (none)
[2023-05-10 13:59:19] 2023-05-10 11:59:03,155 | INFO     | status: LOG_TRANSFER = DONE 
[2023-05-10 13:59:19] 2023-05-10 11:59:03,156 | INFO     | pilot state: finished 
[2023-05-10 13:59:19] 2023-05-10 11:59:03,156 | INFO     | transexitcode: 0
[2023-05-10 13:59:19] 2023-05-10 11:59:03,156 | INFO     | exeerrorcode: 0
[2023-05-10 13:59:19] 2023-05-10 11:59:03,156 | INFO     | exeerrordiag: 
[2023-05-10 13:59:19] 2023-05-10 11:59:03,156 | INFO     | exitcode: 0
[2023-05-10 13:59:19] 2023-05-10 11:59:03,156 | INFO     | exitmsg: OK
[2023-05-10 13:59:19] 2023-05-10 11:59:03,156 | INFO     | cpuconsumptiontime: 536 s
[2023-05-10 13:59:19] 2023-05-10 11:59:03,157 | INFO     | nevents: 2
[2023-05-10 13:59:19] 2023-05-10 11:59:03,157 | INFO     | neventsw: 0
[2023-05-10 13:59:19] 2023-05-10 11:59:03,157 | INFO     | pid: 8672
[2023-05-10 13:59:19] 2023-05-10 11:59:03,157 | INFO     | pgrp: 8672
[2023-05-10 13:59:19] 2023-05-10 11:59:03,157 | INFO     | corecount: 2
[2023-05-10 13:59:19] 2023-05-10 11:59:03,157 | INFO     | event service: False
[2023-05-10 13:59:19] 2023-05-10 11:59:03,157 | INFO     | sizes: {0: 2577974, 11: 2578120, 22: 2578148, 32: 2578176, 43: 2578204, 53: 2578232, 62: 2578448, 64: 2578504, 555: 2604556, 927: 2614102}
[2023-05-10 13:59:19] 2023-05-10 11:59:03,158 | INFO     | --------------------------------------------------
[2023-05-10 13:59:19] 2023-05-10 11:59:03,158 | INFO     | 
[2023-05-10 13:59:19] 2023-05-10 11:59:03,158 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2023-05-10 13:59:19] 2023-05-10 11:59:03,178 | INFO     | queue jobs had 0 job(s) [purged]
[2023-05-10 13:59:19] 2023-05-10 11:59:03,178 | INFO     | queue payloads had 0 job(s) [purged]
[2023-05-10 13:59:19] 2023-05-10 11:59:03,179 | INFO     | queue data_in had 0 job(s) [purged]
[2023-05-10 13:59:19] 2023-05-10 11:59:03,179 | INFO     | queue data_out had 0 job(s) [purged]
[2023-05-10 13:59:19] 2023-05-10 11:59:03,179 | INFO     | queue current_data_in had 0 job(s) [purged]
[2023-05-10 13:59:19] 2023-05-10 11:59:03,179 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2023-05-10 13:59:19] 2023-05-10 11:59:03,179 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2023-05-10 13:59:19] 2023-05-10 11:59:03,179 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2023-05-10 13:59:19] 2023-05-10 11:59:03,179 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2023-05-10 13:59:19] 2023-05-10 11:59:03,179 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2023-05-10 13:59:19] 2023-05-10 11:59:03,179 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2023-05-10 13:59:19] 2023-05-10 11:59:03,179 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2023-05-10 13:59:19] 2023-05-10 11:59:03,179 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2023-05-10 13:59:19] 2023-05-10 11:59:03,179 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2023-05-10 13:59:19] 2023-05-10 11:59:03,179 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2023-05-10 13:59:19] 2023-05-10 11:59:03,180 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2023-05-10 13:59:19] 2023-05-10 11:59:03,180 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2023-05-10 13:59:19] 2023-05-10 11:59:03,180 | INFO     | queue completed_jobids has 1 job(s)
[2023-05-10 13:59:19] 2023-05-10 11:59:03,180 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2023-05-10 13:59:19] 2023-05-10 11:59:03,180 | INFO     | queue messages had 0 job(s) [purged]
[2023-05-10 13:59:19] 2023-05-10 11:59:03,180 | INFO     | job 5842928390 has completed (purged errors)
[2023-05-10 13:59:19] 2023-05-10 11:59:03,180 | INFO     | overall cleanup function is called
[2023-05-10 13:59:19] 2023-05-10 11:59:04,189 | INFO     | --- collectZombieJob: --- 10, [8672]
[2023-05-10 13:59:19] 2023-05-10 11:59:04,190 | INFO     | zombie collector trying to kill pid 8672
[2023-05-10 13:59:19] 2023-05-10 11:59:04,190 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2023-05-10 13:59:19] 2023-05-10 11:59:05,195 | INFO     | collected zombie processes
[2023-05-10 13:59:19] 2023-05-10 11:59:05,195 | INFO     | will now attempt to kill all subprocesses of pid=8672
[2023-05-10 13:59:19] 2023-05-10 11:59:05,222 | INFO     | process IDs to be killed: [8672] (in reverse order)
[2023-05-10 13:59:19] 2023-05-10 11:59:05,250 | WARNING  | found no corresponding commands to process id(s)
[2023-05-10 13:59:19] 2023-05-10 11:59:05,250 | INFO     | Do not look for orphan processes in BOINC jobs
[2023-05-10 13:59:19] 2023-05-10 11:59:05,251 | INFO     | ready for new job
[2023-05-10 13:59:19] 2023-05-10 11:59:05,251 | INFO     | pilot has finished with previous job - re-establishing logging
[2023-05-10 13:59:19] 2023-05-10 11:59:05,253 | INFO     | ****************************************
[2023-05-10 13:59:19] 2023-05-10 11:59:05,253 | INFO     | ***  PanDA Pilot version 3.5.1 (17)  ***
[2023-05-10 13:59:19] 2023-05-10 11:59:05,253 | INFO     | ****************************************
[2023-05-10 13:59:19] 2023-05-10 11:59:05,253 | INFO     | 
[2023-05-10 13:59:19] 2023-05-10 11:59:05,254 | INFO     | pilot is running in a VM
[2023-05-10 13:59:19] 2023-05-10 11:59:05,254 | INFO     | architecture information:
[2023-05-10 13:59:19] 2023-05-10 11:59:05,315 | INFO     | 
[2023-05-10 13:59:19] LSB Version:	:core-4.1-amd64:core-4.1-noarch
[2023-05-10 13:59:19] Distributor ID:	CentOS
[2023-05-10 13:59:19] Description:	CentOS Linux release 7.9.2009 (Core)
[2023-05-10 13:59:19] Release:	7.9.2009
[2023-05-10 13:59:19] Codename:	Core
[2023-05-10 13:59:19] 2023-05-10 11:59:05,316 | INFO     | ****************************************
[2023-05-10 13:59:19] 2023-05-10 11:59:05,819 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2023-05-10 13:59:19] 2023-05-10 11:59:05,839 | INFO     | sufficient remaining disk space (57467207680 B)
[2023-05-10 13:59:19] 2023-05-10 11:59:05,840 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2023-05-10 13:59:19] 2023-05-10 11:59:05,840 | INFO     | [job] retrieve thread has finished
[2023-05-10 13:59:19] 2023-05-10 11:59:05,841 | WARNING  | aborting monitor loop since graceful_stop has been set
[2023-05-10 13:59:19] 2023-05-10 11:59:05,841 | INFO     | [monitor] control thread has ended
[2023-05-10 13:59:19] 2023-05-10 11:59:05,943 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2023-05-10 13:59:19] 2023-05-10 11:59:05,980 | INFO     | [payload] control thread has finished
[2023-05-10 13:59:19] 2023-05-10 11:59:06,059 | INFO     | [payload] failed_post thread has finished
[2023-05-10 13:59:19] 2023-05-10 11:59:06,140 | INFO     | [job] create_data_payload thread has finished
[2023-05-10 13:59:19] 2023-05-10 11:59:06,172 | INFO     | [payload] validate_pre thread has finished
[2023-05-10 13:59:19] 2023-05-10 11:59:06,179 | INFO     | [data] control thread has finished
[2023-05-10 13:59:19] 2023-05-10 11:59:06,179 | INFO     | [job] control thread has finished
[2023-05-10 13:59:19] 2023-05-10 11:59:06,351 | INFO     | [job] validate thread has finished
[2023-05-10 13:59:19] 2023-05-10 11:59:06,465 | INFO     | [data] copytool_in thread has finished
[2023-05-10 13:59:19] 2023-05-10 11:59:06,566 | INFO     | [payload] validate_post thread has finished
[2023-05-10 13:59:19] 2023-05-10 11:59:06,765 | INFO     | [payload] execute_payloads thread has finished
[2023-05-10 13:59:19] 2023-05-10 11:59:06,944 | INFO     | [data] copytool_out thread has finished
[2023-05-10 13:59:19] 2023-05-10 11:59:08,165 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2023-05-10 13:59:19] 2023-05-10 11:59:08,166 | INFO     | [job] queue monitor thread has finished
[2023-05-10 13:59:19] 2023-05-10 11:59:09,023 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2023-05-10 13:59:19] 2023-05-10 11:59:12,024 | INFO     | [data] queue_monitor thread has finished
[2023-05-10 13:59:19] 2023-05-10 11:59:12,237 | WARNING  | no jobs in monitored_payloads queue (waited for 62 s)
[2023-05-10 13:59:19] 2023-05-10 11:59:12,238 | INFO     | [job] job monitor thread has finished
[2023-05-10 13:59:19] 2023-05-10 11:59:17,815 | INFO     | job.realtimelogging is not enabled
[2023-05-10 13:59:19] 2023-05-10 11:59:17,815 | INFO     | [payload] run_realtimelog thread has finished
[2023-05-10 13:59:19] 2023-05-10 11:59:18,119 | INFO     | end of generic workflow (traces error code: 0)
[2023-05-10 13:59:19] 2023-05-10 11:59:18,120 | INFO     | traces error code: 0
[2023-05-10 13:59:19] 2023-05-10 11:59:18,120 | INFO     | pilot has finished
[2023-05-10 13:59:19] 2023-05-10 11:59:18,186 [wrapper] ==== pilot stdout END ====
[2023-05-10 13:59:19] 2023-05-10 11:59:18,188 [wrapper] ==== wrapper stdout RESUME ====
[2023-05-10 13:59:19] 2023-05-10 11:59:18,189 [wrapper] pilotpid: 5268
[2023-05-10 13:59:19] 2023-05-10 11:59:18,191 [wrapper] Pilot exit status: 0
[2023-05-10 13:59:19] 2023-05-10 11:59:18,205 [wrapper] pandaids: 5842928390
[2023-05-10 13:59:19] 2023-05-10 11:59:18,209 [wrapper] apfmon messages muted
[2023-05-10 13:59:19] 2023-05-10 11:59:18,211 [wrapper] Test setup, not cleaning
[2023-05-10 13:59:19] 2023-05-10 11:59:18,212 [wrapper] ==== wrapper stdout END ====
[2023-05-10 13:59:19] 2023-05-10 11:59:18,214 [wrapper] ==== wrapper stderr END ====
[2023-05-10 13:59:19] 2023-05-10 11:59:18,217 [wrapper] wrapperexiting ec=0, duration=1164
[2023-05-10 13:59:19] 2023-05-10 11:59:18,219 [wrapper] apfmon messages muted
[2023-05-10 13:59:19]  *** Error codes and diagnostics ***
[2023-05-10 13:59:19]     "exeErrorCode": 0,
[2023-05-10 13:59:19]     "exeErrorDiag": "",
[2023-05-10 13:59:19]     "pilotErrorCode": 0,
[2023-05-10 13:59:19]     "pilotErrorDiag": "",
[2023-05-10 13:59:19]  *** Listing of results directory ***
[2023-05-10 13:59:19] total 43516
[2023-05-10 13:59:19] -rw-r--r-- 1 boinc boinc   393247 May 10 10:24 pilot3.tar.gz
[2023-05-10 13:59:19] -rw-r--r-- 1 boinc boinc     4388 May 10 11:07 queuedata.json
[2023-05-10 13:59:19] -rwx------ 1 boinc boinc    27542 May 10 11:08 runpilot2-wrapper.sh
[2023-05-10 13:59:19] -rw-r--r-- 1 boinc boinc      107 May 10 13:39 wrapper_26015_x86_64-pc-linux-gnu
[2023-05-10 13:59:19] -rwxr-xr-x 1 boinc boinc     7986 May 10 13:39 run_atlas
[2023-05-10 13:59:19] -rw-r--r-- 1 boinc boinc      112 May 10 13:39 job.xml
[2023-05-10 13:59:19] -rw-r--r-- 1 boinc boinc     6142 May 10 13:39 init_data.xml
[2023-05-10 13:59:19] -rw-r--r-- 2 boinc boinc 37498453 May 10 13:39 EVNT.04972714._000025.pool.root.1
[2023-05-10 13:59:19] -rw-r--r-- 2 boinc boinc    17604 May 10 13:39 start_atlas.sh
[2023-05-10 13:59:19] drwxrwx--x 2 boinc boinc     4096 May 10 13:39 shared
[2023-05-10 13:59:19] -rw-r--r-- 2 boinc boinc   403673 May 10 13:39 input.tar.gz
[2023-05-10 13:59:19] -rw-r--r-- 1 boinc boinc        0 May 10 13:39 boinc_lockfile
[2023-05-10 13:59:19] -rw-r--r-- 1 boinc boinc     2753 May 10 13:39 pandaJob.out
[2023-05-10 13:59:19] -rw------- 1 boinc boinc      424 May 10 13:39 setup.sh.local
[2023-05-10 13:59:19] -rw------- 1 boinc boinc  1445541 May 10 13:41 cric_ddmendpoints.json
[2023-05-10 13:59:19] -rw------- 1 boinc boinc  1011730 May 10 13:41 agis_schedconf.cvmfs.json
[2023-05-10 13:59:19] drwx------ 4 boinc boinc     4096 May 10 13:42 pilot3
[2023-05-10 13:59:19] -rw-r--r-- 1 boinc boinc      532 May 10 13:50 boinc_task_state.xml
[2023-05-10 13:59:19] -rw------- 1 boinc boinc  1256447 May 10 13:52 output.1.abc806f6-1ee1-455f-a224-7d83359b3fd4_17231.pool.root
[2023-05-10 13:59:19] -rw------- 1 boinc boinc     1017 May 10 13:52 memory_monitor_summary.json
[2023-05-10 13:59:19] -rw------- 1 boinc boinc   426671 May 10 13:56 abc806f6-1ee1-455f-a224-7d83359b3fd4_17231.1.job.log.tgz
[2023-05-10 13:59:19] -rw------- 1 boinc boinc     9704 May 10 13:59 heartbeat.json
[2023-05-10 13:59:19] -rw-r--r-- 1 boinc boinc       25 May 10 13:59 wrapper_checkpoint.txt
[2023-05-10 13:59:19] -rw-r--r-- 1 boinc boinc     8192 May 10 13:59 boinc_mmap_file
[2023-05-10 13:59:19] -rw------- 1 boinc boinc     3031 May 10 13:59 pilotlog.txt
[2023-05-10 13:59:19] -rw------- 1 boinc boinc   103896 May 10 13:59 abc806f6-1ee1-455f-a224-7d83359b3fd4_17231.1.job.log
[2023-05-10 13:59:19] -rw------- 1 boinc boinc      464 May 10 13:59 output.list
[2023-05-10 13:59:19] -rw-r--r-- 1 boinc boinc      748 May 10 13:59 runtime_log
[2023-05-10 13:59:19] -rw------- 1 boinc boinc  1812480 May 10 13:59 result.tar.gz
[2023-05-10 13:59:19] -rw-r--r-- 1 boinc boinc    12115 May 10 13:59 runtime_log.err
[2023-05-10 13:59:19] -rw------- 1 boinc boinc      629 May 10 13:59 R5uLDmFzuG3n7Olcko1bjSoqABFKDmABFKDm7AsVDmyCJKDm9scmtn.diag
[2023-05-10 13:59:19] -rw-r--r-- 1 boinc boinc    22650 May 10 13:59 stderr.txt
[2023-05-10 13:59:19] HITS file was successfully produced:
[2023-05-10 13:59:19] -rw------- 1 boinc boinc 1256447 May 10 13:52 shared/HITS.pool.root.1
[2023-05-10 13:59:19]  *** Contents of shared directory: ***
[2023-05-10 13:59:19] total 40036
[2023-05-10 13:59:19] -rw-r--r-- 2 boinc boinc 37498453 May 10 13:39 ATLAS.root_0
[2023-05-10 13:59:19] -rw-r--r-- 2 boinc boinc    17604 May 10 13:39 start_atlas.sh
[2023-05-10 13:59:19] -rw-r--r-- 2 boinc boinc   403673 May 10 13:39 input.tar.gz
[2023-05-10 13:59:19] -rw------- 1 boinc boinc  1256447 May 10 13:52 HITS.pool.root.1
[2023-05-10 13:59:19] -rw------- 1 boinc boinc  1812480 May 10 13:59 result.tar.gz
13:59:20 (1714): run_atlas exited; CPU time 525.016838
13:59:20 (1714): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN