| Name | o1JNDmaNDI3n7Olcko1bjSoqABFKDmABFKDm7AsVDmFQJKDmMEocjn_0 |
| Workunit | 2306429 |
| Created | 13 May 2023, 22:58:57 UTC |
| Sent | 14 May 2023, 0:25:05 UTC |
| Report deadline | 21 May 2023, 0:25:05 UTC |
| Received | 14 May 2023, 4:45:04 UTC |
| Server state | Over |
| Outcome | Success |
| Client state | Done |
| Exit status | 0 (0x00000000) |
| Computer ID | 1498 |
| Run time | 49 min 16 sec |
| CPU time | 1 min 12 sec |
| Validate state | Valid |
| Credit | 34.75 |
| Device peak FLOPS | 12.99 GFLOPS |
| Application version | ATLAS Simulation v3.01 (native_mt) x86_64-pc-linux-gnu |
| Peak working set size | 912.68 MB |
| Peak swap size | 1.51 GB |
| Peak disk usage | 78.46 MB |
Stderr output
<core_client_version>7.4.25</core_client_version>
<![CDATA[
<stderr_txt>
01:26:54 (2646): wrapper (7.7.26015): starting
01:26:54 (2646): wrapper: running run_atlas (--nthreads 4)
[2023-05-14 01:26:54] Arguments: --nthreads 4
[2023-05-14 01:26:54] Threads: 4
[2023-05-14 01:26:54] Checking for CVMFS
[2023-05-14 01:27:08] Probing /cvmfs/atlas.cern.ch... OK
[2023-05-14 01:27:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2023-05-14 01:27:10] Running cvmfs_config stat atlas.cern.ch
[2023-05-14 01:27:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2023-05-14 01:27:10] 2.9.0.0 2868 0 22988 118968 3 1 2477945 4194305 0 130560 0 0 0.000 824 85 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.100.152:3128 1
[2023-05-14 01:27:10] CVMFS is ok
[2023-05-14 01:27:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2023-05-14 01:27:10] Checking for apptainer binary...
[2023-05-14 01:27:10] Using apptainer found in PATH at /usr/bin/apptainer
[2023-05-14 01:27:10] Running /usr/bin/apptainer --version
[2023-05-14 01:27:11] apptainer version 1.0.3
[2023-05-14 01:27:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2023-05-14 01:27:12] TeeC16
[2023-05-14 01:27:12] apptainer works
[2023-05-14 01:27:12] Set ATHENA_PROC_NUMBER=4
[2023-05-14 01:27:12] Set ATHENA_CORE_NUMBER=4
[2023-05-14 01:27:12] Starting ATLAS job with PandaID=5846284008
[2023-05-14 01:27:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/m/BOINC/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2023-05-14 02:16:08] *** The last 200 lines of the pilot log: ***
[2023-05-14 02:16:08] 2023-05-14 01:13:53,119 | INFO | executing command: ps aux -q 6405
[2023-05-14 02:16:08] 2023-05-14 01:13:53,144 | INFO | summary of transferred files:
[2023-05-14 02:16:08] 2023-05-14 01:13:53,144 | INFO | -- lfn=29425749-379e-4cc8-81fb-1735e7281ab3_21192.1.job.log.tgz, status_code=0, status=transferred
[2023-05-14 02:16:08] 2023-05-14 01:13:53,144 | INFO | stage-out finished correctly
[2023-05-14 02:16:08] 2023-05-14 01:13:53,407 | INFO | finished stage-out (of log) for failed payload
[2023-05-14 02:16:08] 2023-05-14 01:13:53,472 | INFO | job 5846284008 has state=failed
[2023-05-14 02:16:08] 2023-05-14 01:13:53,472 | INFO | preparing for final server update for job 5846284008 in state='failed'
[2023-05-14 02:16:08] 2023-05-14 01:14:04,058 | INFO | monitor loop #36: job 0:5846284008 is in state 'failed'
[2023-05-14 02:16:08] 2023-05-14 01:14:04,058 | INFO | will abort job monitoring soon since job state=failed (job is still in queue)
[2023-05-14 02:16:08] 2023-05-14 01:14:52,090 | INFO | collecting machine features
[2023-05-14 02:16:08] 2023-05-14 01:14:52,090 | INFO | machine features path does not exist (path="")
[2023-05-14 02:16:08] 2023-05-14 01:15:05,658 | INFO | monitor loop #37: job 0:5846284008 is in state 'failed'
[2023-05-14 02:16:08] 2023-05-14 01:15:05,658 | INFO | will abort job monitoring soon since job state=failed (job is still in queue)
[2023-05-14 02:16:08] 2023-05-14 01:15:22,163 | INFO | 2865s have passed since pilot start
[2023-05-14 02:16:08] 2023-05-14 01:15:48,526 | INFO | proceeding with final server update
[2023-05-14 02:16:08] 2023-05-14 01:15:48,527 | INFO | pilot will not update the server (heartbeat message will be written to file)
[2023-05-14 02:16:08] 2023-05-14 01:15:48,527 | INFO | job 5846284008 has failed - writing final server update
[2023-05-14 02:16:08] 2023-05-14 01:15:48,527 | WARNING | making sure that job.state is set to failed since a pilot error code is set
[2023-05-14 02:16:08] 2023-05-14 01:15:48,528 | WARNING | format EVNTtoHITS has no such key: dbData
[2023-05-14 02:16:08] 2023-05-14 01:15:48,528 | WARNING | format EVNTtoHITS has no such key: dbTime
[2023-05-14 02:16:08] 2023-05-14 01:15:48,528 | INFO | collecting machine features
[2023-05-14 02:16:08] 2023-05-14 01:15:48,528 | INFO | machine features path does not exist (path="")
[2023-05-14 02:16:08] 2023-05-14 01:15:48,529 | INFO | collecting job features
[2023-05-14 02:16:08] 2023-05-14 01:15:48,529 | INFO | job features path does not exist (path="")
[2023-05-14 02:16:08] 2023-05-14 01:15:48,530 | INFO | fitting pss+swap vs Time
[2023-05-14 02:16:08] 2023-05-14 01:15:48,530 | INFO | current memory leak: 425.08 B/s (using 26 data points, chi2=2.40)
[2023-05-14 02:16:08] 2023-05-14 01:15:48,531 | INFO | payload/TRF did not report the number of read events
[2023-05-14 02:16:08] 2023-05-14 01:15:48,551 | INFO | executing command: lscpu
[2023-05-14 02:16:08] 2023-05-14 01:15:48,569 | INFO | found 2 cores (2 cores per socket, 1 sockets)
[2023-05-14 02:16:08] 2023-05-14 01:15:48,569 | INFO | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2023-05-14 02:16:08] 2023-05-14 01:15:48,598 | INFO | using path: /home/m/BOINC/slots/0/PanDA_Pilot-5846284008/memory_monitor_summary.json (trf name=prmon)
[2023-05-14 02:16:08] 2023-05-14 01:15:48,600 | INFO | extracted standard info from prmon json
[2023-05-14 02:16:08] 2023-05-14 01:15:48,600 | INFO | extracted standard memory fields from prmon json
[2023-05-14 02:16:08] 2023-05-14 01:15:48,600 | INFO | ..............................
[2023-05-14 02:16:08] 2023-05-14 01:15:48,600 | INFO | . Timing measurements:
[2023-05-14 02:16:08] 2023-05-14 01:15:48,600 | INFO | . get job = 78 s
[2023-05-14 02:16:08] 2023-05-14 01:15:48,601 | INFO | . initial setup = 68 s
[2023-05-14 02:16:08] 2023-05-14 01:15:48,601 | INFO | . payload setup = 316 s
[2023-05-14 02:16:08] 2023-05-14 01:15:48,601 | INFO | . stage-in = 69 s
[2023-05-14 02:16:08] 2023-05-14 01:15:48,601 | INFO | . payload execution = 2012 s
[2023-05-14 02:16:08] 2023-05-14 01:15:48,601 | INFO | . stage-out = 221 s
[2023-05-14 02:16:08] 2023-05-14 01:15:48,601 | INFO | ..............................
[2023-05-14 02:16:08] 2023-05-14 01:15:48,601 | INFO | building log extracts (sent to the server as 'pilotLog')
[2023-05-14 02:16:08] 2023-05-14 01:15:48,602 | INFO | executing command: tail -n 20 /home/m/BOINC/slots/0/PanDA_Pilot-5846284008/pilotlog.txt
[2023-05-14 02:16:08] 2023-05-14 01:15:48,618 | WARNING | detected the following tail of warning/fatal messages in the pilot log:
[2023-05-14 02:16:08] - Log from pilotlog.txt -
[2023-05-14 02:16:08] 2023-05-14 01:15:48,530 | INFO | fitting pss+swap vs Time
[2023-05-14 02:16:08] 2023-05-14 01:15:48,530 | INFO | current memory leak: 425.08 B/s (using 26 data points, chi2=2.40)
[2023-05-14 02:16:08] 2023-05-14 01:15:48,531 | INFO | payload/TRF did not report the number of read events
[2023-05-14 02:16:08] 2023-05-14 01:15:48,551 | INFO | executing command: lscpu
[2023-05-14 02:16:08] 2023-05-14 01:15:48,569 | INFO | found 2 cores (2 cores per socket, 1 sockets)
[2023-05-14 02:16:08] 2023-05-14 01:15:48,569 | INFO | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2023-05-14 02:16:08] 2023-05-14 01:15:48,598 | INFO | using path: /home/m/BOINC/slots/0/PanDA_Pilot-5846284008/memory_monitor_summary.json (trf name=prmon)
[2023-05-14 02:16:08] 2023-05-14 01:15:48,600 | INFO | extracted standard info from prmon json
[2023-05-14 02:16:08] 2023-05-14 01:15:48,600 | INFO | extracted standard memory fields from prmon json
[2023-05-14 02:16:08] 2023-05-14 01:15:48,600 | INFO | ..............................
[2023-05-14 02:16:08] 2023-05-14 01:15:48,600 | INFO | . Timing measurements:
[2023-05-14 02:16:08] 2023-05-14 01:15:48,600 | INFO | . get job = 78 s
[2023-05-14 02:16:08] 2023-05-14 01:15:48,601 | INFO | . initial setup = 68 s
[2023-05-14 02:16:08] 2023-05-14 01:15:48,601 | INFO | . payload setup = 316 s
[2023-05-14 02:16:08] 2023-05-14 01:15:48,601 | INFO | . stage-in = 69 s
[2023-05-14 02:16:08] 2023-05-14 01:15:48,601 | INFO | . payload execution = 2012 s
[2023-05-14 02:16:08] 2023-05-14 01:15:48,601 | INFO | . stage-out = 221 s
[2023-05-14 02:16:08] 2023-05-14 01:15:48,601 | INFO | ..............................
[2023-05-14 02:16:08] 2023-05-14 01:15:48,601 | INFO | building log extracts (sent to the server as 'pilotLog')
[2023-05-14 02:16:08] 2023-05-14 01:15:48,602 | INFO | executing command: tail -n 20 /home/m/BOINC/slots/0/PanDA_Pilot-5846284008/pilotlog.txt
[2023-05-14 02:16:08] 2023-05-14 01:15:48,619 | WARNING |
[2023-05-14 02:16:08] [begin log extracts]
[2023-05-14 02:16:08] - Log from pilotlog.txt -
[2023-05-14 02:16:08] 2023-05-14 01:15:48,530 | INFO | fitting pss+swap vs Time
[2023-05-14 02:16:08] 2023-05-14 01:15:48,530 | INFO | current memory leak: 425.08 B/s (using 26 data points, chi2=2.40)
[2023-05-14 02:16:08] 2023-05-14 01:15:48,531 | INFO | payload/TRF did not report the number of read events
[2023-05-14 02:16:08] 2023-05-14 01:15:48,551 | INFO | executing command: lscpu
[2023-05-14 02:16:08] 2023-05-14 01:15:48,569 | INFO | found 2 cores (2 cores per socket, 1 sockets)
[2023-05-14 02:16:08] 2023-05-14 01:15:48,569 | INFO | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2023-05-14 02:16:08] 2023-05-14 01:15:48,598 | INFO | using path: /home/m/BOINC/slots/0/PanDA_Pilot-5846284008/memory_monitor_summary.json (trf name=prmon)
[2023-05-14 02:16:08] 2023-05-14 01:15:48,600 | INFO | extracted standard info from prmon json
[2023-05-14 02:16:08] 2023-05-14 01:15:48,600 | INFO | extracted standard memory fields from prmon json
[2023-05-14 02:16:08] 2023-05-14 01:15:48,600 | INFO | ..............................
[2023-05-14 02:16:08] 2023-05-14 01:15:48,600 | INFO | . Timing measurements:
[2023-05-14 02:16:08] 2023-05-14 01:15:48,600 | INFO | . get job = 78 s
[2023-05-14 02:16:08] 2023-05-14 01:15:48,601 | INFO | . initial setup = 68 s
[2023-05-14 02:16:08] 2023-05-14 01:15:48,601 | INFO | . payload setup = 316 s
[2023-05-14 02:16:08] 2023-05-14 01:15:48,601 | INFO | . stage-in = 69 s
[2023-05-14 02:16:08] 2023-05-14 01:15:48,601 | INFO | . payload execution = 2012 s
[2023-05-14 02:16:08] 2023-05-14 01:15:48,601 | INFO | . stage-out = 221 s
[2023-05-14 02:16:08] 2023-05-14 01:15:48,601 | INFO | ..............................
[2023-05-14 02:16:08] 2023-05-14 01:15:48,601 | INFO | building log extracts (sent to the server as 'pilotLog')
[2023-05-14 02:16:08] 2023-05-14 01:15:48,602 | INFO | executing command: tail -n 20 /home/m/BOINC/slots/0/PanDA_Pilot-5846284008/pilotlog.txt
[2023-05-14 02:16:08] [end log extracts]
[2023-05-14 02:16:08] 2023-05-14 01:15:48,619 | WARNING | pilotErrorCodes = [1305] (will report primary/first error code)
[2023-05-14 02:16:08] 2023-05-14 01:15:48,619 | WARNING | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute 2023-05-14 02:10:03,350 CRITICAL Transform executor raised TransformValidationExcep
[2023-05-14 02:16:08] 2023-05-14 01:15:48,682 | INFO |
[2023-05-14 02:16:08] 2023-05-14 01:15:48,682 | INFO | job summary report
[2023-05-14 02:16:08] 2023-05-14 01:15:48,682 | INFO | --------------------------------------------------
[2023-05-14 02:16:08] 2023-05-14 01:15:48,683 | INFO | PanDA job id: 5846284008
[2023-05-14 02:16:08] 2023-05-14 01:15:48,683 | INFO | task id: NULL
[2023-05-14 02:16:08] 2023-05-14 01:15:48,683 | INFO | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2023-05-14 02:10:03,350 CRITICAL Transform executor raised TransformValidationExceptio
[2023-05-14 02:16:08] 2023-05-14 01:15:48,683 | INFO | status: LOG_TRANSFER = DONE
[2023-05-14 02:16:08] 2023-05-14 01:15:48,683 | INFO | pilot state: failed
[2023-05-14 02:16:08] 2023-05-14 01:15:48,683 | INFO | transexitcode: 65
[2023-05-14 02:16:08] 2023-05-14 01:15:48,683 | INFO | exeerrorcode: 65
[2023-05-14 02:16:08] 2023-05-14 01:15:48,683 | INFO | exeerrordiag: Non-zero return code from EVNTtoHITS (1); Logfile error in log.EVNTtoHITS: "Segmentation fault: Event counter: 0; Run: unknown; Evt: unknown; Current
[2023-05-14 02:16:08] 2023-05-14 01:15:48,683 | INFO | exitcode: 65
[2023-05-14 02:16:08] 2023-05-14 01:15:48,683 | INFO | exitmsg: Non-zero return code from EVNTtoHITS (1); Logfile error in log.EVNTtoHITS: "Segmentation fault: Event counter: 0; Run: unknown; Evt: unknown; Current algo
[2023-05-14 02:16:08] 2023-05-14 01:15:48,683 | INFO | cpuconsumptiontime: 83 s
[2023-05-14 02:16:08] 2023-05-14 01:15:48,684 | INFO | nevents: 0
[2023-05-14 02:16:08] 2023-05-14 01:15:48,684 | INFO | neventsw: 0
[2023-05-14 02:16:08] 2023-05-14 01:15:48,684 | INFO | pid: 9671
[2023-05-14 02:16:08] 2023-05-14 01:15:48,684 | INFO | pgrp: 9671
[2023-05-14 02:16:08] 2023-05-14 01:15:48,684 | INFO | corecount: 4
[2023-05-14 02:16:08] 2023-05-14 01:15:48,684 | INFO | event service: False
[2023-05-14 02:16:08] 2023-05-14 01:15:48,684 | INFO | sizes: {0: 2544705, 1: 2544904, 11: 2545050, 22: 2545078, 33: 2545106, 43: 2545134, 54: 2545290, 65: 2545318, 70: 2545406, 75: 2545434, 2332: 2567850, 2555: 257216
[2023-05-14 02:16:08] 2023-05-14 01:15:48,684 | INFO | --------------------------------------------------
[2023-05-14 02:16:08] 2023-05-14 01:15:48,684 | INFO |
[2023-05-14 02:16:08] 2023-05-14 01:15:48,684 | INFO | executing command: ls -lF /home/m/BOINC/slots/0
[2023-05-14 02:16:08] 2023-05-14 01:15:48,703 | INFO | queue jobs had 0 job(s) [purged]
[2023-05-14 02:16:08] 2023-05-14 01:15:48,703 | INFO | queue payloads had 0 job(s) [purged]
[2023-05-14 02:16:08] 2023-05-14 01:15:48,703 | INFO | queue data_in had 0 job(s) [purged]
[2023-05-14 02:16:08] 2023-05-14 01:15:48,703 | INFO | queue data_out had 0 job(s) [purged]
[2023-05-14 02:16:08] 2023-05-14 01:15:48,703 | INFO | queue current_data_in had 0 job(s) [purged]
[2023-05-14 02:16:08] 2023-05-14 01:15:48,703 | INFO | queue validated_jobs had 0 job(s) [purged]
[2023-05-14 02:16:08] 2023-05-14 01:15:48,703 | INFO | queue validated_payloads had 0 job(s) [purged]
[2023-05-14 02:16:08] 2023-05-14 01:15:48,703 | INFO | queue monitored_payloads had 0 job(s) [purged]
[2023-05-14 02:16:08] 2023-05-14 01:15:48,704 | INFO | queue finished_jobs had 0 job(s) [purged]
[2023-05-14 02:16:08] 2023-05-14 01:15:48,704 | INFO | queue finished_payloads had 0 job(s) [purged]
[2023-05-14 02:16:08] 2023-05-14 01:15:48,704 | INFO | queue finished_data_in had 1 job(s) [purged]
[2023-05-14 02:16:08] 2023-05-14 01:15:48,704 | INFO | queue finished_data_out had 0 job(s) [purged]
[2023-05-14 02:16:08] 2023-05-14 01:15:48,704 | INFO | queue failed_jobs had 0 job(s) [purged]
[2023-05-14 02:16:08] 2023-05-14 01:15:48,704 | INFO | queue failed_payloads had 0 job(s) [purged]
[2023-05-14 02:16:08] 2023-05-14 01:15:48,704 | INFO | queue failed_data_in had 0 job(s) [purged]
[2023-05-14 02:16:08] 2023-05-14 01:15:48,704 | INFO | queue failed_data_out had 0 job(s) [purged]
[2023-05-14 02:16:08] 2023-05-14 01:15:48,704 | INFO | queue completed_jobs had 0 job(s) [purged]
[2023-05-14 02:16:08] 2023-05-14 01:15:48,704 | INFO | queue completed_jobids has 1 job(s)
[2023-05-14 02:16:08] 2023-05-14 01:15:48,704 | INFO | queue realtimelog_payloads had 0 job(s) [purged]
[2023-05-14 02:16:08] 2023-05-14 01:15:48,705 | INFO | queue messages had 0 job(s) [purged]
[2023-05-14 02:16:08] 2023-05-14 01:15:48,705 | INFO | job 5846284008 has completed (purged errors)
[2023-05-14 02:16:08] 2023-05-14 01:15:48,705 | INFO | overall cleanup function is called
[2023-05-14 02:16:08] 2023-05-14 01:15:49,711 | INFO | --- collectZombieJob: --- 10, [9671]
[2023-05-14 02:16:08] 2023-05-14 01:15:49,712 | INFO | zombie collector trying to kill pid 9671
[2023-05-14 02:16:08] 2023-05-14 01:15:49,712 | INFO | harmless exception when collecting zombies: [Errno 10] No child processes
[2023-05-14 02:16:08] 2023-05-14 01:15:50,717 | INFO | collected zombie processes
[2023-05-14 02:16:08] 2023-05-14 01:15:50,717 | INFO | will now attempt to kill all subprocesses of pid=9671
[2023-05-14 02:16:08] 2023-05-14 01:15:50,761 | INFO | process IDs to be killed: [9671] (in reverse order)
[2023-05-14 02:16:08] 2023-05-14 01:15:50,792 | WARNING | found no corresponding commands to process id(s)
[2023-05-14 02:16:08] 2023-05-14 01:15:50,793 | INFO | Do not look for orphan processes in BOINC jobs
[2023-05-14 02:16:08] 2023-05-14 01:15:50,793 | INFO | ready for new job
[2023-05-14 02:16:08] 2023-05-14 01:15:50,793 | INFO | pilot has finished with previous job - re-establishing logging
[2023-05-14 02:16:08] 2023-05-14 01:15:50,793 | INFO | ****************************************
[2023-05-14 02:16:08] 2023-05-14 01:15:50,794 | INFO | *** PanDA Pilot version 3.5.1 (17) ***
[2023-05-14 02:16:08] 2023-05-14 01:15:50,794 | INFO | ****************************************
[2023-05-14 02:16:08] 2023-05-14 01:15:50,794 | INFO |
[2023-05-14 02:16:08] 2023-05-14 01:15:50,813 | INFO | architecture information:
[2023-05-14 02:16:08] 2023-05-14 01:15:50,904 | INFO |
[2023-05-14 02:16:08] LSB Version: :core-4.1-amd64:core-4.1-noarch
[2023-05-14 02:16:08] Distributor ID: CentOS
[2023-05-14 02:16:08] Description: CentOS Linux release 7.9.2009 (Core)
[2023-05-14 02:16:08] Release: 7.9.2009
[2023-05-14 02:16:08] Codename: Core
[2023-05-14 02:16:08] 2023-05-14 01:15:50,904 | INFO | ****************************************
[2023-05-14 02:16:08] 2023-05-14 01:15:51,407 | INFO | executing command: df -mP /home/m/BOINC/slots/0
[2023-05-14 02:16:08] 2023-05-14 01:15:51,424 | INFO | sufficient remaining disk space (423716978688 B)
[2023-05-14 02:16:08] 2023-05-14 01:15:51,425 | WARNING | since timefloor is set to 0, pilot was only allowed to run one job
[2023-05-14 02:16:08] 2023-05-14 01:15:51,425 | INFO | [job] retrieve thread has finished
[2023-05-14 02:16:08] 2023-05-14 01:15:51,425 | WARNING | aborting monitor loop since graceful_stop has been set
[2023-05-14 02:16:08] 2023-05-14 01:15:51,425 | WARNING | data:copytool_out:received graceful stop - abort after this iteration
[2023-05-14 02:16:08] 2023-05-14 01:15:51,426 | INFO | [monitor] control thread has ended
[2023-05-14 02:16:08] 2023-05-14 01:15:51,676 | INFO | [payload] execute_payloads thread has finished
[2023-05-14 02:16:08] 2023-05-14 01:15:51,757 | INFO | [data] control thread has finished
[2023-05-14 02:16:08] 2023-05-14 01:15:51,757 | INFO | [job] create_data_payload thread has finished
[2023-05-14 02:16:08] 2023-05-14 01:15:51,936 | INFO | [payload] validate_pre thread has finished
[2023-05-14 02:16:08] 2023-05-14 01:15:51,979 | INFO | [job] validate thread has finished
[2023-05-14 02:16:08] 2023-05-14 01:15:52,052 | WARNING | data:queue_monitoring:received graceful stop - abort after this iteration
[2023-05-14 02:16:08] 2023-05-14 01:15:52,103 | INFO | [payload] failed_post thread has finished
[2023-05-14 02:16:08] 2023-05-14 01:15:52,168 | INFO | [data] copytool_in thread has finished
[2023-05-14 02:16:08] 2023-05-14 01:15:52,319 | INFO | [payload] control thread has finished
[2023-05-14 02:16:08] 2023-05-14 01:15:52,401 | INFO | [payload] validate_post thread has finished
[2023-05-14 02:16:08] 2023-05-14 01:15:52,426 | INFO | [data] copytool_out thread has finished
[2023-05-14 02:16:08] 2023-05-14 01:15:52,816 | INFO | [job] control thread has finished
[2023-05-14 02:16:08] 2023-05-14 01:15:53,693 | WARNING | job:queue_monitor:received graceful stop - abort after this iteration
[2023-05-14 02:16:08] 2023-05-14 01:15:53,694 | INFO | [job] queue monitor thread has finished
[2023-05-14 02:16:08] 2023-05-14 01:15:55,053 | INFO | [data] queue_monitor thread has finished
[2023-05-14 02:16:08] 2023-05-14 01:16:02,819 | INFO | job.realtimelogging is not enabled
[2023-05-14 02:16:08] 2023-05-14 01:16:02,819 | INFO | [payload] run_realtimelog thread has finished
[2023-05-14 02:16:08] 2023-05-14 01:16:07,250 | WARNING | no jobs in monitored_payloads queue (waited for 62 s)
[2023-05-14 02:16:08] 2023-05-14 01:16:07,250 | INFO | [job] job monitor thread has finished
[2023-05-14 02:16:08] 2023-05-14 01:16:07,912 | INFO | end of generic workflow (traces error code: 0)
[2023-05-14 02:16:08] 2023-05-14 01:16:07,913 | INFO | traces error code: 0
[2023-05-14 02:16:08] 2023-05-14 01:16:07,913 | INFO | pilot has finished
[2023-05-14 02:16:08] 2023-05-14 01:16:07,959 [wrapper] ==== pilot stdout END ====
[2023-05-14 02:16:08] 2023-05-14 01:16:07,963 [wrapper] ==== wrapper stdout RESUME ====
[2023-05-14 02:16:08] 2023-05-14 01:16:07,966 [wrapper] pilotpid: 6405
[2023-05-14 02:16:08] 2023-05-14 01:16:07,970 [wrapper] Pilot exit status: 0
[2023-05-14 02:16:08] 2023-05-14 01:16:07,981 [wrapper] pandaids: 5846284008
[2023-05-14 02:16:08] 2023-05-14 01:16:07,987 [wrapper] apfmon messages muted
[2023-05-14 02:16:08] 2023-05-14 01:16:07,991 [wrapper] Test setup, not cleaning
[2023-05-14 02:16:08] 2023-05-14 01:16:07,996 [wrapper] ==== wrapper stdout END ====
[2023-05-14 02:16:08] 2023-05-14 01:16:08,000 [wrapper] ==== wrapper stderr END ====
[2023-05-14 02:16:08] 2023-05-14 01:16:08,009 [wrapper] wrapperexiting ec=0, duration=2935
[2023-05-14 02:16:08] 2023-05-14 01:16:08,014 [wrapper] apfmon messages muted
[2023-05-14 02:16:08] *** Error codes and diagnostics ***
[2023-05-14 02:16:08] "exeErrorCode": 65,
[2023-05-14 02:16:08] "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1); Logfile error in log.EVNTtoHITS: \"Segmentation fault: Event counter: 0; Run: unknown; Evt: unknown; Current algorithm: ISF_Kernel_FullG4; Current Function: unknown\"",
[2023-05-14 02:16:08] "pilotErrorCode": 1305,
[2023-05-14 02:16:08] "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute 2023-05-14 02:10:03,350 CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1); Logfile error in log.EVNTtoHITS: \"Segmentation fault: Event counter: 0; Run: unknown; Evt: unknown; Current algorithm",
[2023-05-14 02:16:08] *** Listing of results directory ***
[2023-05-14 02:16:08] total 40596
[2023-05-14 02:16:08] -rw-r--r-- 1 m m 393247 May 13 23:24 pilot3.tar.gz
[2023-05-14 02:16:08] -rw-r--r-- 1 m m 4388 May 13 23:55 queuedata.json
[2023-05-14 02:16:08] -rwx------ 1 m m 27542 May 13 23:58 runpilot2-wrapper.sh
[2023-05-14 02:16:08] -rw-rw-r-- 1 m m 107 May 14 01:26 wrapper_26015_x86_64-pc-linux-gnu
[2023-05-14 02:16:08] -rwxr-xr-x 1 m m 7986 May 14 01:26 run_atlas
[2023-05-14 02:16:08] -rw-rw-r-- 1 m m 112 May 14 01:26 job.xml
[2023-05-14 02:16:08] -rw-r--r-- 2 m m 17604 May 14 01:26 start_atlas.sh
[2023-05-14 02:16:08] drwxrwx--x 2 m m 4096 May 14 01:26 shared
[2023-05-14 02:16:08] -rw-r--r-- 2 m m 403675 May 14 01:26 input.tar.gz
[2023-05-14 02:16:08] -rw-rw-r-- 1 m m 5708 May 14 01:26 init_data.xml
[2023-05-14 02:16:08] -rw-r--r-- 2 m m 37620382 May 14 01:26 EVNT.04972714._000038.pool.root.1
[2023-05-14 02:16:08] -rw-rw-r-- 1 m m 0 May 14 01:26 boinc_lockfile
[2023-05-14 02:16:08] -rw-rw-r-- 1 m m 2750 May 14 01:27 pandaJob.out
[2023-05-14 02:16:08] -rw------- 1 m m 424 May 14 01:27 setup.sh.local
[2023-05-14 02:16:08] -rw------- 1 m m 1425008 May 14 01:28 cric_ddmendpoints.json
[2023-05-14 02:16:08] -rw------- 1 m m 1016688 May 14 01:28 agis_schedconf.cvmfs.json
[2023-05-14 02:16:08] drwx------ 4 m m 4096 May 14 01:30 pilot3
[2023-05-14 02:16:08] -rw------- 1 m m 1021 May 14 02:10 memory_monitor_summary.json
[2023-05-14 02:16:08] -rw------- 1 m m 82170 May 14 02:10 29425749-379e-4cc8-81fb-1735e7281ab3_21192.1.job.log.tgz
[2023-05-14 02:16:08] -rw-rw-r-- 1 m m 531 May 14 02:10 boinc_task_state.xml
[2023-05-14 02:16:08] -rw------- 1 m m 8167 May 14 02:15 heartbeat.json
[2023-05-14 02:16:08] -rw-rw-r-- 1 m m 8192 May 14 02:16 boinc_mmap_file
[2023-05-14 02:16:08] -rw-rw-r-- 1 m m 24 May 14 02:16 wrapper_checkpoint.txt
[2023-05-14 02:16:08] -rw------- 1 m m 2962 May 14 02:16 pilotlog.txt
[2023-05-14 02:16:08] -rw------- 1 m m 160980 May 14 02:16 29425749-379e-4cc8-81fb-1735e7281ab3_21192.1.job.log
[2023-05-14 02:16:08] -rw------- 1 m m 227 May 14 02:16 output.list
[2023-05-14 02:16:08] -rw-rw-r-- 1 m m 686 May 14 02:16 runtime_log
[2023-05-14 02:16:08] -rw------- 1 m m 266240 May 14 02:16 result.tar.gz
[2023-05-14 02:16:08] -rw-rw-r-- 1 m m 11324 May 14 02:16 runtime_log.err
[2023-05-14 02:16:08] -rw------- 1 m m 623 May 14 02:16 o1JNDmaNDI3n7Olcko1bjSoqABFKDmABFKDm7AsVDmFQJKDmMEocjn.diag
[2023-05-14 02:16:08] -rw-rw-r-- 1 m m 22477 May 14 02:16 stderr.txt
[2023-05-14 02:16:08] No HITS result produced
[2023-05-14 02:16:08] *** Contents of shared directory: ***
[2023-05-14 02:16:08] total 37416
[2023-05-14 02:16:08] -rw-r--r-- 2 m m 17604 May 14 01:26 start_atlas.sh
[2023-05-14 02:16:08] -rw-r--r-- 2 m m 403675 May 14 01:26 input.tar.gz
[2023-05-14 02:16:08] -rw-r--r-- 2 m m 37620382 May 14 01:26 ATLAS.root_0
[2023-05-14 02:16:08] -rw------- 1 m m 266240 May 14 02:16 result.tar.gz
02:16:09 (2646): run_atlas exited; CPU time 72.225987
02:16:09 (2646): called boinc_finish(0)
</stderr_txt>
]]>
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