Stderr output

<core_client_version>7.14.2</core_client_version>
<![CDATA[
<stderr_txt>
18:11:16 (14106): wrapper (7.7.26015): starting
18:11:16 (14106): wrapper: running run_atlas (--nthreads 2)
[2023-05-20 18:11:16] Arguments: --nthreads 2
[2023-05-20 18:11:16] Threads: 2
[2023-05-20 18:11:16] Checking for CVMFS
[2023-05-20 18:11:16] Probing /cvmfs/atlas.cern.ch... OK
[2023-05-20 18:11:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2023-05-20 18:11:18] Running cvmfs_config stat atlas.cern.ch
[2023-05-20 18:11:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2023-05-20 18:11:18] 2.10.1.0 26304 1340 47488 119200 3 84 4076876 4194304 0 130560 0 4161575 99.996 114126 2615 http://cernvmfs.gridpp.rl.ac.uk:8000/cvmfs/atlas.cern.ch DIRECT 1
[2023-05-20 18:11:18] CVMFS is ok
[2023-05-20 18:11:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2023-05-20 18:11:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2023-05-20 18:11:18] Small home clusters do not require a local http proxy but it is suggested if
[2023-05-20 18:11:18] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2023-05-20 18:11:18] Further information can be found at the LHC@home message board.
[2023-05-20 18:11:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2023-05-20 18:11:18] Checking for apptainer binary...
[2023-05-20 18:11:18] apptainer is not installed, using version from CVMFS
[2023-05-20 18:11:18] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2023-05-20 18:11:19] vps-3dca72ac
[2023-05-20 18:11:19] apptainer works
[2023-05-20 18:11:19] Set ATHENA_PROC_NUMBER=2
[2023-05-20 18:11:19] Set ATHENA_CORE_NUMBER=2
[2023-05-20 18:11:19] Starting ATLAS job with PandaID=5850776902
[2023-05-20 18:11:19] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2023-05-20 18:35:06]  *** The last 200 lines of the pilot log: ***
[2023-05-20 18:35:06] 2023-05-20 16:33:39,846 | WARNING  | cache file=/var/lib/boinc-client/slots/0/agis_ddmendpoints.agis.ALL.json is not available: [Errno 2] No such file or directory: '/var/lib/boinc-client/slots/0/agis
[2023-05-20 18:35:06] 2023-05-20 16:33:39,896 | INFO     | Resolved protocol to be used for transfer: '{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}': l
[2023-05-20 18:35:06] 2023-05-20 16:33:39,897 | INFO     | ready to transfer (stage-out) files: [ accessmode=
[2023-05-20 18:35:06]  activity=['pl', 'pw', 'w', 'default']
[2023-05-20 18:35:06]  allow_lan=True
[2023-05-20 18:35:06]  allow_wan=False
[2023-05-20 18:35:06]  checkinputsize=True
[2023-05-20 18:35:06]  checksum={'adler32': '1e144b81'}
[2023-05-20 18:35:06]  dataset=hc_test.gangarbt.hc20266860.tid1184.BOINC-TEST.32
[2023-05-20 18:35:06]  ddm_activity=['write_lan', 'write_wan']
[2023-05-20 18:35:06]  ddmendpoint=NDGF-T1_DATADISK
[2023-05-20 18:35:06]  direct_access_lan=False
[2023-05-20 18:35:06]  direct_access_wan=False
[2023-05-20 18:35:06]  domain=
[2023-05-20 18:35:06]  filesize=429215
[2023-05-20 18:35:06]  filetype=log
[2023-05-20 18:35:06]  guid=7701d12f-4142-4098-9639-a557f5268d97
[2023-05-20 18:35:06]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2023-05-20 18:35:06]  is_tar=False
[2023-05-20 18:35:06]  lfn=926d9e82-a41f-4926-b811-40147bbe794b_25888.1.job.log.tgz
[2023-05-20 18:35:06]  mtime=0
[2023-05-20 18:35:06]  protocol_id=None
[2023-05-20 18:35:06]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2023-05-20 18:35:06]  replicas=None
[2023-05-20 18:35:06]  scope=hc_test
[2023-05-20 18:35:06]  status=None
[2023-05-20 18:35:06]  status_code=0
[2023-05-20 18:35:06]  storage_token=
[2023-05-20 18:35:06]  surl=/var/lib/boinc-client/slots/0/PanDA_Pilot-5850776902/926d9e82-a41f-4926-b811-40147bbe794b_25888.1.job.log.tgz
[2023-05-20 18:35:06]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/7e/b7/926d9e82-a41f-4926-b811-40147bbe794b_25888.1.job.log.tgz
[2023-05-20 18:35:06]  workdir=None
[2023-05-20 18:35:06] ]
[2023-05-20 18:35:06] 2023-05-20 16:33:39,898 | INFO     | [attempt=1/3] loading data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json
[2023-05-20 18:35:06] 2023-05-20 16:33:39,946 | WARNING  | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: 
[2023-05-20 18:35:06] 2023-05-20 16:33:39,947 | INFO     | will try again after 41s..
[2023-05-20 18:35:06] 2023-05-20 16:33:45,066 | INFO     | collecting machine features
[2023-05-20 18:35:06] 2023-05-20 16:33:45,067 | INFO     | machine features path does not exist (path="")
[2023-05-20 18:35:06] 2023-05-20 16:33:54,583 | INFO     | monitor loop #16: job 0:5850776902 is in state 'stageout'
[2023-05-20 18:35:06] 2023-05-20 16:33:54,584 | INFO     | payload log (log.HITSMergeAthenaMP0) within allowed size limit (2147483648 B): 134754 B
[2023-05-20 18:35:06] 2023-05-20 16:33:54,584 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 1369792 B
[2023-05-20 18:35:06] 2023-05-20 16:33:54,584 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 13001 B
[2023-05-20 18:35:06] 2023-05-20 16:33:54,585 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2023-05-20 18:35:06] 2023-05-20 16:33:54,606 | INFO     | sufficient remaining disk space (56249810944 B)
[2023-05-20 18:35:06] 2023-05-20 16:33:54,607 | INFO     | work directory size check will use 61362667520 B as a max limit (10% grace limit added)
[2023-05-20 18:35:06] 2023-05-20 16:33:54,609 | INFO     | size of work directory /var/lib/boinc-client/slots/0/PanDA_Pilot-5850776902: 2937854 B (within 61362667520 B limit)
[2023-05-20 18:35:06] 2023-05-20 16:33:54,609 | INFO     | pfn file=/var/lib/boinc-client/slots/0/PanDA_Pilot-5850776902/output.1.926d9e82-a41f-4926-b811-40147bbe794b_25888.pool.root does not exist (skip from workdir size 
[2023-05-20 18:35:06] 2023-05-20 16:33:54,609 | INFO     | total size of present files: 0 B (workdir size: 2937854 B)
[2023-05-20 18:35:06] 2023-05-20 16:33:54,609 | INFO     | output file size check: skipping output file /var/lib/boinc-client/slots/0/PanDA_Pilot-5850776902/output.1.926d9e82-a41f-4926-b811-40147bbe794b_25888.pool.root sin
[2023-05-20 18:35:06] 2023-05-20 16:33:54,638 | INFO     | number of running child processes to parent process 20739: 1
[2023-05-20 18:35:06] 2023-05-20 16:33:54,639 | INFO     | maximum number of monitored processes: 7
[2023-05-20 18:35:06] 2023-05-20 16:34:20,983 | INFO     | [attempt=2/3] loading data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json
[2023-05-20 18:35:06] 2023-05-20 16:34:21,090 | WARNING  | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: 
[2023-05-20 18:35:06] 2023-05-20 16:34:21,090 | INFO     | will try again after 24s..
[2023-05-20 18:35:06] 2023-05-20 16:34:45,183 | INFO     | [attempt=3/3] loading data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json
[2023-05-20 18:35:06] 2023-05-20 16:34:45,209 | INFO     | collecting machine features
[2023-05-20 18:35:06] 2023-05-20 16:34:45,209 | INFO     | machine features path does not exist (path="")
[2023-05-20 18:35:06] 2023-05-20 16:34:45,294 | WARNING  | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: 
[2023-05-20 18:35:06] 2023-05-20 16:34:45,294 | WARNING  | cache file=/var/lib/boinc-client/slots/0/agis_ddmendpoints.agis.ALL.json is not available: [Errno 2] No such file or directory: '/var/lib/boinc-client/slots/0/agis
[2023-05-20 18:35:06] 2023-05-20 16:34:45,343 | INFO     | transferring file 926d9e82-a41f-4926-b811-40147bbe794b_25888.1.job.log.tgz from /var/lib/boinc-client/slots/0/PanDA_Pilot-5850776902/926d9e82-a41f-4926-b811-40147b
[2023-05-20 18:35:06] 2023-05-20 16:34:45,343 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/0/PanDA_Pilot-5850776902/926d9e82-a41f-4926-b811-40147bbe794b_25888.1.job.log.tgz /var/lib/boinc-cli
[2023-05-20 18:35:06] 2023-05-20 16:34:45,362 | INFO     | Adding to output.list: 926d9e82-a41f-4926-b811-40147bbe794b_25888.1.job.log.tgz davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/7e/b7/926d9e82-a41f-
[2023-05-20 18:35:06] 2023-05-20 16:34:45,363 | INFO     | executing command: ps aux -q 17636
[2023-05-20 18:35:06] 2023-05-20 16:34:45,381 | INFO     | summary of transferred files:
[2023-05-20 18:35:06] 2023-05-20 16:34:45,382 | INFO     |  -- lfn=926d9e82-a41f-4926-b811-40147bbe794b_25888.1.job.log.tgz, status_code=0, status=transferred
[2023-05-20 18:35:06] 2023-05-20 16:34:45,382 | INFO     | stage-out finished correctly
[2023-05-20 18:35:06] 2023-05-20 16:34:48,490 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2023-05-20 18:35:06] 2023-05-20 16:34:51,583 | INFO     | job 5850776902 has state=finished
[2023-05-20 18:35:06] 2023-05-20 16:34:51,584 | INFO     | preparing for final server update for job 5850776902 in state='finished'
[2023-05-20 18:35:06] 2023-05-20 16:34:51,584 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2023-05-20 18:35:06] 2023-05-20 16:34:51,585 | INFO     | job 5850776902 has finished - writing final server update
[2023-05-20 18:35:06] 2023-05-20 16:34:51,585 | INFO     | collecting machine features
[2023-05-20 18:35:06] 2023-05-20 16:34:51,585 | INFO     | machine features path does not exist (path="")
[2023-05-20 18:35:06] 2023-05-20 16:34:51,586 | INFO     | collecting job features
[2023-05-20 18:35:06] 2023-05-20 16:34:51,586 | INFO     | job features path does not exist (path="")
[2023-05-20 18:35:06] 2023-05-20 16:34:51,587 | WARNING  | wrong length of table data, x=[1684599603.0, 1684599664.0, 1684599725.0, 1684599786.0, 1684599847.0, 1684599908.0], y=[1895439.0, 1910657.0, 1924430.0, 1939819.0, 
[2023-05-20 18:35:06] 2023-05-20 16:34:51,588 | INFO     | total number of processed events: 2 (read)
[2023-05-20 18:35:06] 2023-05-20 16:34:51,590 | INFO     | executing command: lscpu
[2023-05-20 18:35:06] 2023-05-20 16:34:51,605 | INFO     | found 2 cores (1 cores per socket, 2 sockets)
[2023-05-20 18:35:06] 2023-05-20 16:34:51,606 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2023-05-20 18:35:06] 2023-05-20 16:34:51,635 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-5850776902/memory_monitor_summary.json (trf name=prmon)
[2023-05-20 18:35:06] 2023-05-20 16:34:51,636 | INFO     | extracted standard info from prmon json
[2023-05-20 18:35:06] 2023-05-20 16:34:51,636 | INFO     | extracted standard memory fields from prmon json
[2023-05-20 18:35:06] 2023-05-20 16:34:51,636 | INFO     | ..............................
[2023-05-20 18:35:06] 2023-05-20 16:34:51,636 | INFO     | . Timing measurements:
[2023-05-20 18:35:06] 2023-05-20 16:34:51,636 | INFO     | . get job = 60 s
[2023-05-20 18:35:06] 2023-05-20 16:34:51,637 | INFO     | . initial setup = 69 s
[2023-05-20 18:35:06] 2023-05-20 16:34:51,637 | INFO     | . payload setup = 7 s
[2023-05-20 18:35:06] 2023-05-20 16:34:51,637 | INFO     | . stage-in = 53 s
[2023-05-20 18:35:06] 2023-05-20 16:34:51,637 | INFO     | . payload execution = 749 s
[2023-05-20 18:35:06] 2023-05-20 16:34:51,637 | INFO     | . stage-out = 438 s
[2023-05-20 18:35:06] 2023-05-20 16:34:51,637 | INFO     | ..............................
[2023-05-20 18:35:06] 2023-05-20 16:34:51,704 | INFO     | 
[2023-05-20 18:35:06] 2023-05-20 16:34:51,705 | INFO     | job summary report
[2023-05-20 18:35:06] 2023-05-20 16:34:51,705 | INFO     | --------------------------------------------------
[2023-05-20 18:35:06] 2023-05-20 16:34:51,705 | INFO     | PanDA job id: 5850776902
[2023-05-20 18:35:06] 2023-05-20 16:34:51,705 | INFO     | task id: NULL
[2023-05-20 18:35:06] 2023-05-20 16:34:51,705 | INFO     | errors: (none)
[2023-05-20 18:35:06] 2023-05-20 16:34:51,705 | INFO     | status: LOG_TRANSFER = DONE 
[2023-05-20 18:35:06] 2023-05-20 16:34:51,705 | INFO     | pilot state: finished 
[2023-05-20 18:35:06] 2023-05-20 16:34:51,705 | INFO     | transexitcode: 0
[2023-05-20 18:35:06] 2023-05-20 16:34:51,705 | INFO     | exeerrorcode: 0
[2023-05-20 18:35:06] 2023-05-20 16:34:51,705 | INFO     | exeerrordiag: 
[2023-05-20 18:35:06] 2023-05-20 16:34:51,705 | INFO     | exitcode: 0
[2023-05-20 18:35:06] 2023-05-20 16:34:51,705 | INFO     | exitmsg: OK
[2023-05-20 18:35:06] 2023-05-20 16:34:51,705 | INFO     | cpuconsumptiontime: 954 s
[2023-05-20 18:35:06] 2023-05-20 16:34:51,705 | INFO     | nevents: 2
[2023-05-20 18:35:06] 2023-05-20 16:34:51,706 | INFO     | neventsw: 0
[2023-05-20 18:35:06] 2023-05-20 16:34:51,706 | INFO     | pid: 20739
[2023-05-20 18:35:06] 2023-05-20 16:34:51,706 | INFO     | pgrp: 20739
[2023-05-20 18:35:06] 2023-05-20 16:34:51,706 | INFO     | corecount: 2
[2023-05-20 18:35:06] 2023-05-20 16:34:51,706 | INFO     | event service: False
[2023-05-20 18:35:06] 2023-05-20 16:34:51,706 | INFO     | sizes: {0: 2512055, 1: 2512310, 12: 2512456, 22: 2512484, 33: 2512512, 43: 2512540, 54: 2512696, 55: 2512784, 65: 2512812, 760: 2536319, 1199: 2545671, 1202: 25460
[2023-05-20 18:35:06] 2023-05-20 16:34:51,706 | INFO     | --------------------------------------------------
[2023-05-20 18:35:06] 2023-05-20 16:34:51,706 | INFO     | 
[2023-05-20 18:35:06] 2023-05-20 16:34:51,706 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2023-05-20 18:35:06] 2023-05-20 16:34:51,724 | INFO     | queue jobs had 0 job(s) [purged]
[2023-05-20 18:35:06] 2023-05-20 16:34:51,724 | INFO     | queue payloads had 0 job(s) [purged]
[2023-05-20 18:35:06] 2023-05-20 16:34:51,724 | INFO     | queue data_in had 0 job(s) [purged]
[2023-05-20 18:35:06] 2023-05-20 16:34:51,724 | INFO     | queue data_out had 0 job(s) [purged]
[2023-05-20 18:35:06] 2023-05-20 16:34:51,724 | INFO     | queue current_data_in had 0 job(s) [purged]
[2023-05-20 18:35:06] 2023-05-20 16:34:51,724 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2023-05-20 18:35:06] 2023-05-20 16:34:51,724 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2023-05-20 18:35:06] 2023-05-20 16:34:51,725 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2023-05-20 18:35:06] 2023-05-20 16:34:51,725 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2023-05-20 18:35:06] 2023-05-20 16:34:51,725 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2023-05-20 18:35:06] 2023-05-20 16:34:51,725 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2023-05-20 18:35:06] 2023-05-20 16:34:51,725 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2023-05-20 18:35:06] 2023-05-20 16:34:51,725 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2023-05-20 18:35:06] 2023-05-20 16:34:51,725 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2023-05-20 18:35:06] 2023-05-20 16:34:51,725 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2023-05-20 18:35:06] 2023-05-20 16:34:51,725 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2023-05-20 18:35:06] 2023-05-20 16:34:51,725 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2023-05-20 18:35:06] 2023-05-20 16:34:51,725 | INFO     | queue completed_jobids has 1 job(s)
[2023-05-20 18:35:06] 2023-05-20 16:34:51,725 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2023-05-20 18:35:06] 2023-05-20 16:34:51,725 | INFO     | queue messages had 0 job(s) [purged]
[2023-05-20 18:35:06] 2023-05-20 16:34:51,726 | INFO     | job 5850776902 has completed (purged errors)
[2023-05-20 18:35:06] 2023-05-20 16:34:51,726 | INFO     | overall cleanup function is called
[2023-05-20 18:35:06] 2023-05-20 16:34:52,734 | INFO     | --- collectZombieJob: --- 10, [20739]
[2023-05-20 18:35:06] 2023-05-20 16:34:52,734 | INFO     | zombie collector trying to kill pid 20739
[2023-05-20 18:35:06] 2023-05-20 16:34:52,734 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2023-05-20 18:35:06] 2023-05-20 16:34:53,739 | INFO     | collected zombie processes
[2023-05-20 18:35:06] 2023-05-20 16:34:53,740 | INFO     | will now attempt to kill all subprocesses of pid=20739
[2023-05-20 18:35:06] 2023-05-20 16:34:53,771 | INFO     | process IDs to be killed: [20739] (in reverse order)
[2023-05-20 18:35:06] 2023-05-20 16:34:53,793 | WARNING  | found no corresponding commands to process id(s)
[2023-05-20 18:35:06] 2023-05-20 16:34:53,794 | INFO     | Do not look for orphan processes in BOINC jobs
[2023-05-20 18:35:06] 2023-05-20 16:34:53,794 | INFO     | ready for new job
[2023-05-20 18:35:06] 2023-05-20 16:34:53,794 | INFO     | pilot has finished with previous job - re-establishing logging
[2023-05-20 18:35:06] 2023-05-20 16:34:53,796 | INFO     | ****************************************
[2023-05-20 18:35:06] 2023-05-20 16:34:53,796 | INFO     | ***  PanDA Pilot version 3.5.1 (17)  ***
[2023-05-20 18:35:06] 2023-05-20 16:34:53,796 | INFO     | ****************************************
[2023-05-20 18:35:06] 2023-05-20 16:34:53,796 | INFO     | 
[2023-05-20 18:35:06] 2023-05-20 16:34:53,796 | INFO     | pilot is running in a VM
[2023-05-20 18:35:06] 2023-05-20 16:34:53,797 | INFO     | architecture information:
[2023-05-20 18:35:06] 2023-05-20 16:34:53,852 | INFO     | 
[2023-05-20 18:35:06] LSB Version:	:core-4.1-amd64:core-4.1-noarch
[2023-05-20 18:35:06] Distributor ID:	CentOS
[2023-05-20 18:35:06] Description:	CentOS Linux release 7.9.2009 (Core)
[2023-05-20 18:35:06] Release:	7.9.2009
[2023-05-20 18:35:06] Codename:	Core
[2023-05-20 18:35:06] 2023-05-20 16:34:53,852 | INFO     | ****************************************
[2023-05-20 18:35:06] 2023-05-20 16:34:54,355 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2023-05-20 18:35:06] 2023-05-20 16:34:54,373 | INFO     | sufficient remaining disk space (56252956672 B)
[2023-05-20 18:35:06] 2023-05-20 16:34:54,374 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2023-05-20 18:35:06] 2023-05-20 16:34:54,374 | INFO     | [job] retrieve thread has finished
[2023-05-20 18:35:06] 2023-05-20 16:34:54,374 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2023-05-20 18:35:06] 2023-05-20 16:34:54,375 | WARNING  | aborting monitor loop since graceful_stop has been set
[2023-05-20 18:35:06] 2023-05-20 16:34:54,375 | INFO     | [monitor] control thread has ended
[2023-05-20 18:35:06] 2023-05-20 16:34:54,381 | INFO     | [job] control thread has finished
[2023-05-20 18:35:06] 2023-05-20 16:34:54,399 | INFO     | [data] copytool_in thread has finished
[2023-05-20 18:35:06] 2023-05-20 16:34:54,399 | INFO     | [job] create_data_payload thread has finished
[2023-05-20 18:35:06] 2023-05-20 16:34:54,428 | INFO     | [payload] control thread has finished
[2023-05-20 18:35:06] 2023-05-20 16:34:54,478 | INFO     | [payload] failed_post thread has finished
[2023-05-20 18:35:06] 2023-05-20 16:34:54,602 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2023-05-20 18:35:06] 2023-05-20 16:34:54,603 | INFO     | [payload] validate_pre thread has finished
[2023-05-20 18:35:06] 2023-05-20 16:34:54,603 | INFO     | [job] validate thread has finished
[2023-05-20 18:35:06] 2023-05-20 16:34:55,167 | INFO     | [payload] validate_post thread has finished
[2023-05-20 18:35:06] 2023-05-20 16:34:55,375 | INFO     | [data] copytool_out thread has finished
[2023-05-20 18:35:06] 2023-05-20 16:34:55,404 | INFO     | [data] control thread has finished
[2023-05-20 18:35:06] 2023-05-20 16:34:55,436 | INFO     | [payload] execute_payloads thread has finished
[2023-05-20 18:35:06] 2023-05-20 16:34:56,199 | WARNING  | no jobs in monitored_payloads queue (waited for 62 s)
[2023-05-20 18:35:06] 2023-05-20 16:34:56,199 | INFO     | [job] job monitor thread has finished
[2023-05-20 18:35:06] 2023-05-20 16:34:56,716 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2023-05-20 18:35:06] 2023-05-20 16:34:56,716 | INFO     | [job] queue monitor thread has finished
[2023-05-20 18:35:06] 2023-05-20 16:34:57,603 | INFO     | [data] queue_monitor thread has finished
[2023-05-20 18:35:06] 2023-05-20 16:35:04,483 | INFO     | job.realtimelogging is not enabled
[2023-05-20 18:35:06] 2023-05-20 16:35:04,483 | INFO     | [payload] run_realtimelog thread has finished
[2023-05-20 18:35:06] 2023-05-20 16:35:05,450 | INFO     | end of generic workflow (traces error code: 0)
[2023-05-20 18:35:06] 2023-05-20 16:35:05,450 | INFO     | traces error code: 0
[2023-05-20 18:35:06] 2023-05-20 16:35:05,451 | INFO     | pilot has finished
[2023-05-20 18:35:06] 2023-05-20 16:35:05,511 [wrapper] ==== pilot stdout END ====
[2023-05-20 18:35:06] 2023-05-20 16:35:05,514 [wrapper] ==== wrapper stdout RESUME ====
[2023-05-20 18:35:06] 2023-05-20 16:35:05,518 [wrapper] pilotpid: 17636
[2023-05-20 18:35:06] 2023-05-20 16:35:05,520 [wrapper] Pilot exit status: 0
[2023-05-20 18:35:06] 2023-05-20 16:35:05,530 [wrapper] pandaids: 5850776902
[2023-05-20 18:35:06] 2023-05-20 16:35:05,533 [wrapper] apfmon messages muted
[2023-05-20 18:35:06] 2023-05-20 16:35:05,535 [wrapper] Test setup, not cleaning
[2023-05-20 18:35:06] 2023-05-20 16:35:05,537 [wrapper] ==== wrapper stdout END ====
[2023-05-20 18:35:06] 2023-05-20 16:35:05,538 [wrapper] ==== wrapper stderr END ====
[2023-05-20 18:35:06] 2023-05-20 16:35:05,542 [wrapper] wrapperexiting ec=0, duration=1426
[2023-05-20 18:35:06] 2023-05-20 16:35:05,543 [wrapper] apfmon messages muted
[2023-05-20 18:35:06]  *** Error codes and diagnostics ***
[2023-05-20 18:35:06]     "exeErrorCode": 0,
[2023-05-20 18:35:06]     "exeErrorDiag": "",
[2023-05-20 18:35:06]     "pilotErrorCode": 0,
[2023-05-20 18:35:06]     "pilotErrorDiag": "",
[2023-05-20 18:35:06]  *** Listing of results directory ***
[2023-05-20 18:35:06] total 46720
[2023-05-20 18:35:06] -rw-r--r-- 1 boinc boinc   393247 May 20 16:39 pilot3.tar.gz
[2023-05-20 18:35:06] -rw-r--r-- 1 boinc boinc     4388 May 20 17:05 queuedata.json
[2023-05-20 18:35:06] -rwx------ 1 boinc boinc    27542 May 20 17:05 runpilot2-wrapper.sh
[2023-05-20 18:35:06] -rw-r--r-- 1 boinc boinc      107 May 20 18:11 wrapper_26015_x86_64-pc-linux-gnu
[2023-05-20 18:35:06] -rwxr-xr-x 1 boinc boinc     7986 May 20 18:11 run_atlas
[2023-05-20 18:35:06] -rw-r--r-- 1 boinc boinc      112 May 20 18:11 job.xml
[2023-05-20 18:35:06] -rw-r--r-- 2 boinc boinc   403671 May 20 18:11 input.tar.gz
[2023-05-20 18:35:06] -rw-r--r-- 1 boinc boinc     6142 May 20 18:11 init_data.xml
[2023-05-20 18:35:06] -rw-r--r-- 2 boinc boinc 38217911 May 20 18:11 EVNT.04972714._000030.pool.root.1
[2023-05-20 18:35:06] -rw-r--r-- 2 boinc boinc    17604 May 20 18:11 start_atlas.sh
[2023-05-20 18:35:06] drwxrwx--x 2 boinc boinc     4096 May 20 18:11 shared
[2023-05-20 18:35:06] -rw-r--r-- 1 boinc boinc        0 May 20 18:11 boinc_lockfile
[2023-05-20 18:35:06] -rw-r--r-- 1 boinc boinc     2753 May 20 18:11 pandaJob.out
[2023-05-20 18:35:06] -rw------- 1 boinc boinc      424 May 20 18:11 setup.sh.local
[2023-05-20 18:35:06] -rw------- 1 boinc boinc  1405167 May 20 18:12 cric_ddmendpoints.json
[2023-05-20 18:35:06] -rw------- 1 boinc boinc  1017697 May 20 18:12 agis_schedconf.cvmfs.json
[2023-05-20 18:35:06] drwx------ 4 boinc boinc     4096 May 20 18:13 pilot3
[2023-05-20 18:35:06] -rw-r--r-- 1 boinc boinc      532 May 20 18:24 boinc_task_state.xml
[2023-05-20 18:35:06] -rw------- 1 boinc boinc  2545424 May 20 18:27 output.1.926d9e82-a41f-4926-b811-40147bbe794b_25888.pool.root
[2023-05-20 18:35:06] -rw------- 1 boinc boinc     1016 May 20 18:27 memory_monitor_summary.json
[2023-05-20 18:35:06] -rw------- 1 boinc boinc   429215 May 20 18:31 926d9e82-a41f-4926-b811-40147bbe794b_25888.1.job.log.tgz
[2023-05-20 18:35:06] -rw------- 1 boinc boinc     7886 May 20 18:34 heartbeat.json
[2023-05-20 18:35:06] -rw------- 1 boinc boinc     3031 May 20 18:35 pilotlog.txt
[2023-05-20 18:35:06] -rw------- 1 boinc boinc   114487 May 20 18:35 926d9e82-a41f-4926-b811-40147bbe794b_25888.1.job.log
[2023-05-20 18:35:06] -rw------- 1 boinc boinc      464 May 20 18:35 output.list
[2023-05-20 18:35:06] -rw-r--r-- 1 boinc boinc      748 May 20 18:35 runtime_log
[2023-05-20 18:35:06] -rw------- 1 boinc boinc  3112960 May 20 18:35 result.tar.gz
[2023-05-20 18:35:06] -rw-r--r-- 1 boinc boinc    12115 May 20 18:35 runtime_log.err
[2023-05-20 18:35:06] -rw------- 1 boinc boinc      629 May 20 18:35 Iq9KDmRKdK3n7Olcko1bjSoqABFKDmABFKDm7AsVDm9oJKDmCCenpn.diag
[2023-05-20 18:35:06] -rw-r--r-- 1 boinc boinc     8192 May 20 18:35 boinc_mmap_file
[2023-05-20 18:35:06] -rw-r--r-- 1 boinc boinc       25 May 20 18:35 wrapper_checkpoint.txt
[2023-05-20 18:35:06] -rw-r--r-- 1 boinc boinc    22609 May 20 18:35 stderr.txt
[2023-05-20 18:35:06] HITS file was successfully produced:
[2023-05-20 18:35:06] -rw------- 1 boinc boinc 2545424 May 20 18:27 shared/HITS.pool.root.1
[2023-05-20 18:35:06]  *** Contents of shared directory: ***
[2023-05-20 18:35:06] total 43268
[2023-05-20 18:35:06] -rw-r--r-- 2 boinc boinc   403671 May 20 18:11 input.tar.gz
[2023-05-20 18:35:06] -rw-r--r-- 2 boinc boinc 38217911 May 20 18:11 ATLAS.root_0
[2023-05-20 18:35:06] -rw-r--r-- 2 boinc boinc    17604 May 20 18:11 start_atlas.sh
[2023-05-20 18:35:06] -rw------- 1 boinc boinc  2545424 May 20 18:27 HITS.pool.root.1
[2023-05-20 18:35:06] -rw------- 1 boinc boinc  3112960 May 20 18:35 result.tar.gz
18:35:08 (14106): run_atlas exited; CPU time 941.203780
18:35:08 (14106): called boinc_finish(0)

</stderr_txt>
]]>

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