Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
10:26:07 (1181472): wrapper (7.7.26015): starting
10:26:07 (1181472): wrapper: running run_atlas (--nthreads 1)
[2023-05-28 10:26:07] Arguments: --nthreads 1
[2023-05-28 10:26:07] Threads: 1
[2023-05-28 10:26:07] Checking for CVMFS
[2023-05-28 10:26:07] Probing /cvmfs/atlas.cern.ch... OK
[2023-05-28 10:26:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2023-05-28 10:26:08] Running cvmfs_config stat atlas.cern.ch
[2023-05-28 10:26:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2023-05-28 10:26:09] 2.10.1.0 1122007 87 46356 119502 1 59 3343679 4096001 0 130560 0 215111 99.859 82908 2659 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2023-05-28 10:26:09] CVMFS is ok
[2023-05-28 10:26:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2023-05-28 10:26:09] Small home clusters do not require a local http proxy but it is suggested if
[2023-05-28 10:26:09] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2023-05-28 10:26:09] Further information can be found at the LHC@home message board.
[2023-05-28 10:26:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2023-05-28 10:26:09] Checking for apptainer binary...
[2023-05-28 10:26:09] apptainer is not installed, using version from CVMFS
[2023-05-28 10:26:09] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2023-05-28 10:26:09] T5810
[2023-05-28 10:26:09] apptainer works
[2023-05-28 10:26:09] Starting ATLAS job with PandaID=5859030772
[2023-05-28 10:26:09] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/31 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2023-05-28 10:52:34]  *** The last 200 lines of the pilot log: ***
[2023-05-28 10:52:34] 2023-05-28 16:51:24,722 | INFO     | monitor loop #18: job 0:5859030772 is in state 'stageout'
[2023-05-28 10:52:34] 2023-05-28 16:51:24,723 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 779560 B
[2023-05-28 10:52:34] 2023-05-28 16:51:24,723 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 8859 B
[2023-05-28 10:52:34] 2023-05-28 16:51:24,723 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/31
[2023-05-28 10:52:34] 2023-05-28 16:51:24,743 | INFO     | sufficient remaining disk space (191677595648 B)
[2023-05-28 10:52:34] 2023-05-28 16:51:24,744 | INFO     | work directory size check will use 61362667520 B as a max limit (10% grace limit added)
[2023-05-28 10:52:34] 2023-05-28 16:51:24,745 | INFO     | size of work directory /var/lib/boinc-client/slots/31/PanDA_Pilot-5859030772: 1117517 B (within 61362667520 B limit)
[2023-05-28 10:52:34] 2023-05-28 16:51:24,745 | INFO     | pfn file=/var/lib/boinc-client/slots/31/PanDA_Pilot-5859030772/output.1.07d7f45d-a74f-4c01-9dca-8ea2c1cd720c_15263.pool.root does not exist (skip from workdir size
[2023-05-28 10:52:34] 2023-05-28 16:51:24,745 | INFO     | total size of present files: 0 B (workdir size: 1117517 B)
[2023-05-28 10:52:34] 2023-05-28 16:51:24,745 | INFO     | output file size check: skipping output file /var/lib/boinc-client/slots/31/PanDA_Pilot-5859030772/output.1.07d7f45d-a74f-4c01-9dca-8ea2c1cd720c_15263.pool.root si
[2023-05-28 10:52:34] 2023-05-28 16:51:24,823 | INFO     | number of running child processes to parent process 1188653: 1
[2023-05-28 10:52:34] 2023-05-28 16:51:24,823 | INFO     | maximum number of monitored processes: 5
[2023-05-28 10:52:34] 2023-05-28 16:51:31,439 | INFO     | [attempt=3/3] loading data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json
[2023-05-28 10:52:34] 2023-05-28 16:51:31,791 | WARNING  | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: 
[2023-05-28 10:52:34] 2023-05-28 16:51:31,791 | WARNING  | cache file=/var/lib/boinc-client/slots/31/agis_ddmendpoints.agis.ALL.json is not available: [Errno 2] No such file or directory: '/var/lib/boinc-client/slots/31/ag
[2023-05-28 10:52:34] 2023-05-28 16:51:31,857 | INFO     | Resolved protocol to be used for transfer: '{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}': l
[2023-05-28 10:52:34] 2023-05-28 16:51:31,857 | INFO     | ready to transfer (stage-out) files: [ accessmode=
[2023-05-28 10:52:34]  activity=['pl', 'pw', 'w', 'default']
[2023-05-28 10:52:34]  allow_lan=True
[2023-05-28 10:52:34]  allow_wan=False
[2023-05-28 10:52:34]  checkinputsize=True
[2023-05-28 10:52:34]  checksum={'adler32': '8e289615'}
[2023-05-28 10:52:34]  dataset=hc_test.gangarbt.hc20267393.tid1184.BOINC-TEST.136
[2023-05-28 10:52:34]  ddm_activity=['write_lan', 'write_wan']
[2023-05-28 10:52:34]  ddmendpoint=NDGF-T1_DATADISK
[2023-05-28 10:52:34]  direct_access_lan=False
[2023-05-28 10:52:34]  direct_access_wan=False
[2023-05-28 10:52:34]  domain=
[2023-05-28 10:52:34]  filesize=154986
[2023-05-28 10:52:34]  filetype=log
[2023-05-28 10:52:34]  guid=ffee814f-9ac2-49a0-96c3-9376a4d3ffdb
[2023-05-28 10:52:34]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2023-05-28 10:52:34]  is_tar=False
[2023-05-28 10:52:34]  lfn=07d7f45d-a74f-4c01-9dca-8ea2c1cd720c_15263.1.job.log.tgz
[2023-05-28 10:52:34]  mtime=0
[2023-05-28 10:52:34]  protocol_id=None
[2023-05-28 10:52:34]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2023-05-28 10:52:34]  replicas=None
[2023-05-28 10:52:34]  scope=hc_test
[2023-05-28 10:52:34]  status=None
[2023-05-28 10:52:34]  status_code=0
[2023-05-28 10:52:34]  storage_token=
[2023-05-28 10:52:34]  surl=/var/lib/boinc-client/slots/31/PanDA_Pilot-5859030772/07d7f45d-a74f-4c01-9dca-8ea2c1cd720c_15263.1.job.log.tgz
[2023-05-28 10:52:34]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/42/0d/07d7f45d-a74f-4c01-9dca-8ea2c1cd720c_15263.1.job.log.tgz
[2023-05-28 10:52:34]  workdir=None
[2023-05-28 10:52:34] ]
[2023-05-28 10:52:34] 2023-05-28 16:51:31,859 | INFO     | [attempt=1/3] loading data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json
[2023-05-28 10:52:34] 2023-05-28 16:51:32,203 | WARNING  | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: 
[2023-05-28 10:52:34] 2023-05-28 16:51:32,203 | INFO     | will try again after 25s..
[2023-05-28 10:52:34] 2023-05-28 16:51:48,715 | INFO     | 1524s have passed since pilot start
[2023-05-28 10:52:34] 2023-05-28 16:51:57,302 | INFO     | [attempt=2/3] loading data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json
[2023-05-28 10:52:34] 2023-05-28 16:51:57,655 | WARNING  | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: 
[2023-05-28 10:52:34] 2023-05-28 16:51:57,655 | INFO     | will try again after 20s..
[2023-05-28 10:52:34] 2023-05-28 16:52:17,754 | INFO     | [attempt=3/3] loading data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json
[2023-05-28 10:52:34] 2023-05-28 16:52:18,451 | WARNING  | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: 
[2023-05-28 10:52:34] 2023-05-28 16:52:18,452 | WARNING  | cache file=/var/lib/boinc-client/slots/31/agis_ddmendpoints.agis.ALL.json is not available: [Errno 2] No such file or directory: '/var/lib/boinc-client/slots/31/ag
[2023-05-28 10:52:34] 2023-05-28 16:52:18,525 | INFO     | transferring file 07d7f45d-a74f-4c01-9dca-8ea2c1cd720c_15263.1.job.log.tgz from /var/lib/boinc-client/slots/31/PanDA_Pilot-5859030772/07d7f45d-a74f-4c01-9dca-8ea2c
[2023-05-28 10:52:34] 2023-05-28 16:52:18,525 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/31/PanDA_Pilot-5859030772/07d7f45d-a74f-4c01-9dca-8ea2c1cd720c_15263.1.job.log.tgz /var/lib/boinc-cl
[2023-05-28 10:52:34] 2023-05-28 16:52:18,545 | INFO     | Adding to output.list: 07d7f45d-a74f-4c01-9dca-8ea2c1cd720c_15263.1.job.log.tgz davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/42/0d/07d7f45d-a74f-
[2023-05-28 10:52:34] 2023-05-28 16:52:18,546 | INFO     | executing command: ps aux -q 1185144
[2023-05-28 10:52:34] 2023-05-28 16:52:18,567 | INFO     | summary of transferred files:
[2023-05-28 10:52:34] 2023-05-28 16:52:18,567 | INFO     |  -- lfn=07d7f45d-a74f-4c01-9dca-8ea2c1cd720c_15263.1.job.log.tgz, status_code=0, status=transferred
[2023-05-28 10:52:34] 2023-05-28 16:52:18,567 | INFO     | stage-out finished correctly
[2023-05-28 10:52:34] 2023-05-28 16:52:18,775 | INFO     | collecting machine features
[2023-05-28 10:52:34] 2023-05-28 16:52:18,776 | INFO     | machine features path does not exist (path="")
[2023-05-28 10:52:34] 2023-05-28 16:52:20,895 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2023-05-28 10:52:34] 2023-05-28 16:52:21,014 | INFO     | job 5859030772 has state=finished
[2023-05-28 10:52:34] 2023-05-28 16:52:21,014 | INFO     | preparing for final server update for job 5859030772 in state='finished'
[2023-05-28 10:52:34] 2023-05-28 16:52:21,015 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2023-05-28 10:52:34] 2023-05-28 16:52:21,015 | INFO     | job 5859030772 has finished - writing final server update
[2023-05-28 10:52:34] 2023-05-28 16:52:21,016 | INFO     | collecting machine features
[2023-05-28 10:52:34] 2023-05-28 16:52:21,016 | INFO     | machine features path does not exist (path="")
[2023-05-28 10:52:34] 2023-05-28 16:52:21,016 | INFO     | collecting job features
[2023-05-28 10:52:34] 2023-05-28 16:52:21,016 | INFO     | job features path does not exist (path="")
[2023-05-28 10:52:34] 2023-05-28 16:52:21,017 | INFO     | fitting pss+swap vs Time
[2023-05-28 10:52:34] 2023-05-28 16:52:21,017 | INFO     | current memory leak: 1510.52 B/s (using 10 data points, chi2=0.04)
[2023-05-28 10:52:34] 2023-05-28 16:52:21,018 | INFO     | total number of processed events: 2 (read)
[2023-05-28 10:52:34] 2023-05-28 16:52:21,037 | INFO     | executing command: lscpu
[2023-05-28 10:52:34] 2023-05-28 16:52:21,066 | INFO     | found 14 cores (14 cores per socket, 1 sockets)
[2023-05-28 10:52:34] 2023-05-28 16:52:21,066 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2023-05-28 10:52:34] 2023-05-28 16:52:21,100 | INFO     | using path: /var/lib/boinc-client/slots/31/PanDA_Pilot-5859030772/memory_monitor_summary.json (trf name=prmon)
[2023-05-28 10:52:34] 2023-05-28 16:52:21,101 | INFO     | extracted standard info from prmon json
[2023-05-28 10:52:34] 2023-05-28 16:52:21,102 | INFO     | extracted standard memory fields from prmon json
[2023-05-28 10:52:34] 2023-05-28 16:52:21,102 | INFO     | ..............................
[2023-05-28 10:52:34] 2023-05-28 16:52:21,102 | INFO     | . Timing measurements:
[2023-05-28 10:52:34] 2023-05-28 16:52:21,102 | INFO     | . get job = 61 s
[2023-05-28 10:52:34] 2023-05-28 16:52:21,102 | INFO     | . initial setup = 51 s
[2023-05-28 10:52:34] 2023-05-28 16:52:21,102 | INFO     | . payload setup = 12 s
[2023-05-28 10:52:34] 2023-05-28 16:52:21,102 | INFO     | . stage-in = 73 s
[2023-05-28 10:52:34] 2023-05-28 16:52:21,103 | INFO     | . payload execution = 991 s
[2023-05-28 10:52:34] 2023-05-28 16:52:21,104 | INFO     | . stage-out = 359 s
[2023-05-28 10:52:34] 2023-05-28 16:52:21,104 | INFO     | ..............................
[2023-05-28 10:52:34] 2023-05-28 16:52:21,217 | INFO     | 
[2023-05-28 10:52:34] 2023-05-28 16:52:21,217 | INFO     | job summary report
[2023-05-28 10:52:34] 2023-05-28 16:52:21,217 | INFO     | --------------------------------------------------
[2023-05-28 10:52:34] 2023-05-28 16:52:21,217 | INFO     | PanDA job id: 5859030772
[2023-05-28 10:52:34] 2023-05-28 16:52:21,218 | INFO     | task id: NULL
[2023-05-28 10:52:34] 2023-05-28 16:52:21,218 | INFO     | errors: (none)
[2023-05-28 10:52:34] 2023-05-28 16:52:21,218 | INFO     | status: LOG_TRANSFER = DONE 
[2023-05-28 10:52:34] 2023-05-28 16:52:21,218 | INFO     | pilot state: finished 
[2023-05-28 10:52:34] 2023-05-28 16:52:21,218 | INFO     | transexitcode: 0
[2023-05-28 10:52:34] 2023-05-28 16:52:21,218 | INFO     | exeerrorcode: 0
[2023-05-28 10:52:34] 2023-05-28 16:52:21,218 | INFO     | exeerrordiag: 
[2023-05-28 10:52:34] 2023-05-28 16:52:21,218 | INFO     | exitcode: 0
[2023-05-28 10:52:34] 2023-05-28 16:52:21,218 | INFO     | exitmsg: OK
[2023-05-28 10:52:34] 2023-05-28 16:52:21,218 | INFO     | cpuconsumptiontime: 651 s
[2023-05-28 10:52:34] 2023-05-28 16:52:21,219 | INFO     | nevents: 2
[2023-05-28 10:52:34] 2023-05-28 16:52:21,219 | INFO     | neventsw: 0
[2023-05-28 10:52:34] 2023-05-28 16:52:21,219 | INFO     | pid: 1188653
[2023-05-28 10:52:34] 2023-05-28 16:52:21,219 | INFO     | pgrp: 1188653
[2023-05-28 10:52:34] 2023-05-28 16:52:21,219 | INFO     | corecount: 1
[2023-05-28 10:52:34] 2023-05-28 16:52:21,219 | INFO     | event service: False
[2023-05-28 10:52:34] 2023-05-28 16:52:21,219 | INFO     | sizes: {0: 2538602, 1: 2538602, 11: 2538776, 22: 2538804, 32: 2538832, 43: 2538860, 54: 2539016, 64: 2539044, 74: 2539132, 75: 2539160, 1007: 2559330, 1008: 255960
[2023-05-28 10:52:34] 2023-05-28 16:52:21,219 | INFO     | --------------------------------------------------
[2023-05-28 10:52:34] 2023-05-28 16:52:21,219 | INFO     | 
[2023-05-28 10:52:34] 2023-05-28 16:52:21,219 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/31
[2023-05-28 10:52:34] 2023-05-28 16:52:21,239 | INFO     | queue jobs had 0 job(s) [purged]
[2023-05-28 10:52:34] 2023-05-28 16:52:21,241 | INFO     | queue payloads had 0 job(s) [purged]
[2023-05-28 10:52:34] 2023-05-28 16:52:21,241 | INFO     | queue data_in had 0 job(s) [purged]
[2023-05-28 10:52:34] 2023-05-28 16:52:21,241 | INFO     | queue data_out had 0 job(s) [purged]
[2023-05-28 10:52:34] 2023-05-28 16:52:21,241 | INFO     | queue current_data_in had 0 job(s) [purged]
[2023-05-28 10:52:34] 2023-05-28 16:52:21,241 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2023-05-28 10:52:34] 2023-05-28 16:52:21,241 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2023-05-28 10:52:34] 2023-05-28 16:52:21,241 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2023-05-28 10:52:34] 2023-05-28 16:52:21,241 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2023-05-28 10:52:34] 2023-05-28 16:52:21,241 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2023-05-28 10:52:34] 2023-05-28 16:52:21,241 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2023-05-28 10:52:34] 2023-05-28 16:52:21,242 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2023-05-28 10:52:34] 2023-05-28 16:52:21,242 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2023-05-28 10:52:34] 2023-05-28 16:52:21,242 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2023-05-28 10:52:34] 2023-05-28 16:52:21,242 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2023-05-28 10:52:34] 2023-05-28 16:52:21,242 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2023-05-28 10:52:34] 2023-05-28 16:52:21,242 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2023-05-28 10:52:34] 2023-05-28 16:52:21,242 | INFO     | queue completed_jobids has 1 job(s)
[2023-05-28 10:52:34] 2023-05-28 16:52:21,242 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2023-05-28 10:52:34] 2023-05-28 16:52:21,242 | INFO     | queue messages had 0 job(s) [purged]
[2023-05-28 10:52:34] 2023-05-28 16:52:21,243 | INFO     | job 5859030772 has completed (purged errors)
[2023-05-28 10:52:34] 2023-05-28 16:52:21,243 | INFO     | overall cleanup function is called
[2023-05-28 10:52:34] 2023-05-28 16:52:22,246 | INFO     | --- collectZombieJob: --- 10, [1188653]
[2023-05-28 10:52:34] 2023-05-28 16:52:22,247 | INFO     | zombie collector trying to kill pid 1188653
[2023-05-28 10:52:34] 2023-05-28 16:52:22,247 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2023-05-28 10:52:34] 2023-05-28 16:52:23,250 | INFO     | collected zombie processes
[2023-05-28 10:52:34] 2023-05-28 16:52:23,251 | INFO     | will now attempt to kill all subprocesses of pid=1188653
[2023-05-28 10:52:34] 2023-05-28 16:52:23,343 | INFO     | process IDs to be killed: [1188653] (in reverse order)
[2023-05-28 10:52:34] 2023-05-28 16:52:23,417 | WARNING  | found no corresponding commands to process id(s)
[2023-05-28 10:52:34] 2023-05-28 16:52:23,417 | INFO     | Do not look for orphan processes in BOINC jobs
[2023-05-28 10:52:34] 2023-05-28 16:52:23,418 | INFO     | ready for new job
[2023-05-28 10:52:34] 2023-05-28 16:52:23,418 | INFO     | pilot has finished with previous job - re-establishing logging
[2023-05-28 10:52:34] 2023-05-28 16:52:23,419 | INFO     | ****************************************
[2023-05-28 10:52:34] 2023-05-28 16:52:23,419 | INFO     | ***  PanDA Pilot version 3.5.1 (17)  ***
[2023-05-28 10:52:34] 2023-05-28 16:52:23,419 | INFO     | ****************************************
[2023-05-28 10:52:34] 2023-05-28 16:52:23,419 | INFO     | 
[2023-05-28 10:52:34] 2023-05-28 16:52:23,440 | INFO     | architecture information:
[2023-05-28 10:52:34] 2023-05-28 16:52:23,512 | INFO     | 
[2023-05-28 10:52:34] LSB Version:	:core-4.1-amd64:core-4.1-noarch
[2023-05-28 10:52:34] Distributor ID:	CentOS
[2023-05-28 10:52:34] Description:	CentOS Linux release 7.9.2009 (Core)
[2023-05-28 10:52:34] Release:	7.9.2009
[2023-05-28 10:52:34] Codename:	Core
[2023-05-28 10:52:34] 2023-05-28 16:52:23,513 | INFO     | ****************************************
[2023-05-28 10:52:34] 2023-05-28 16:52:24,015 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/31
[2023-05-28 10:52:34] 2023-05-28 16:52:24,034 | INFO     | sufficient remaining disk space (191678644224 B)
[2023-05-28 10:52:34] 2023-05-28 16:52:24,035 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2023-05-28 10:52:34] 2023-05-28 16:52:24,035 | INFO     | [job] retrieve thread has finished
[2023-05-28 10:52:34] 2023-05-28 16:52:24,035 | WARNING  | aborting monitor loop since graceful_stop has been set
[2023-05-28 10:52:34] 2023-05-28 16:52:24,035 | INFO     | [monitor] control thread has ended
[2023-05-28 10:52:34] 2023-05-28 16:52:24,063 | INFO     | [data] control thread has finished
[2023-05-28 10:52:34] 2023-05-28 16:52:24,189 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2023-05-28 10:52:34] 2023-05-28 16:52:24,221 | INFO     | [data] copytool_in thread has finished
[2023-05-28 10:52:34] 2023-05-28 16:52:24,229 | INFO     | [payload] failed_post thread has finished
[2023-05-28 10:52:34] 2023-05-28 16:52:24,399 | INFO     | [payload] execute_payloads thread has finished
[2023-05-28 10:52:34] 2023-05-28 16:52:24,896 | INFO     | [payload] validate_post thread has finished
[2023-05-28 10:52:34] 2023-05-28 16:52:25,084 | INFO     | [job] control thread has finished
[2023-05-28 10:52:34] 2023-05-28 16:52:25,168 | INFO     | [job] create_data_payload thread has finished
[2023-05-28 10:52:34] 2023-05-28 16:52:25,190 | INFO     | [data] copytool_out thread has finished
[2023-05-28 10:52:34] 2023-05-28 16:52:25,307 | INFO     | [job] validate thread has finished
[2023-05-28 10:52:34] 2023-05-28 16:52:25,343 | INFO     | [payload] control thread has finished
[2023-05-28 10:52:34] 2023-05-28 16:52:25,431 | INFO     | [payload] validate_pre thread has finished
[2023-05-28 10:52:34] 2023-05-28 16:52:26,224 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2023-05-28 10:52:34] 2023-05-28 16:52:26,224 | INFO     | [job] queue monitor thread has finished
[2023-05-28 10:52:34] 2023-05-28 16:52:26,422 | WARNING  | no jobs in monitored_payloads queue (waited for 62 s)
[2023-05-28 10:52:34] 2023-05-28 16:52:26,423 | INFO     | [job] job monitor thread has finished
[2023-05-28 10:52:34] 2023-05-28 16:52:27,018 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2023-05-28 10:52:34] 2023-05-28 16:52:30,018 | INFO     | [data] queue_monitor thread has finished
[2023-05-28 10:52:34] 2023-05-28 16:52:34,254 | INFO     | job.realtimelogging is not enabled
[2023-05-28 10:52:34] 2023-05-28 16:52:34,255 | INFO     | [payload] run_realtimelog thread has finished
[2023-05-28 10:52:34] 2023-05-28 16:52:34,524 | INFO     | end of generic workflow (traces error code: 0)
[2023-05-28 10:52:34] 2023-05-28 16:52:34,524 | INFO     | traces error code: 0
[2023-05-28 10:52:34] 2023-05-28 16:52:34,524 | INFO     | pilot has finished
[2023-05-28 10:52:34] 2023-05-28 16:52:34,596 [wrapper] ==== pilot stdout END ====
[2023-05-28 10:52:34] 2023-05-28 16:52:34,598 [wrapper] ==== wrapper stdout RESUME ====
[2023-05-28 10:52:34] 2023-05-28 16:52:34,604 [wrapper] pilotpid: 1185144
[2023-05-28 10:52:34] 2023-05-28 16:52:34,612 [wrapper] Pilot exit status: 0
[2023-05-28 10:52:34] 2023-05-28 16:52:34,621 [wrapper] pandaids: 5859030772
[2023-05-28 10:52:34] 2023-05-28 16:52:34,628 [wrapper] apfmon messages muted
[2023-05-28 10:52:34] 2023-05-28 16:52:34,630 [wrapper] Test setup, not cleaning
[2023-05-28 10:52:34] 2023-05-28 16:52:34,636 [wrapper] ==== wrapper stdout END ====
[2023-05-28 10:52:34] 2023-05-28 16:52:34,638 [wrapper] ==== wrapper stderr END ====
[2023-05-28 10:52:34] 2023-05-28 16:52:34,652 [wrapper] wrapperexiting ec=0, duration=1585
[2023-05-28 10:52:34] 2023-05-28 16:52:34,663 [wrapper] apfmon messages muted
[2023-05-28 10:52:34]  *** Error codes and diagnostics ***
[2023-05-28 10:52:34]     "exeErrorCode": 0,
[2023-05-28 10:52:34]     "exeErrorDiag": "",
[2023-05-28 10:52:34]     "pilotErrorCode": 0,
[2023-05-28 10:52:34]     "pilotErrorDiag": "",
[2023-05-28 10:52:34]  *** Listing of results directory ***
[2023-05-28 10:52:34] total 42888
[2023-05-28 10:52:34] -rw-r--r-- 1 boinc boinc   393247 May 28 09:38 pilot3.tar.gz
[2023-05-28 10:52:34] -rw-r--r-- 1 boinc boinc     4388 May 28 10:20 queuedata.json
[2023-05-28 10:52:34] -rwx------ 1 boinc boinc    27811 May 28 10:23 runpilot2-wrapper.sh
[2023-05-28 10:52:34] -rw-r--r-- 1 boinc boinc      107 May 28 10:26 wrapper_26015_x86_64-pc-linux-gnu
[2023-05-28 10:52:34] -rwxr-xr-x 1 boinc boinc     7986 May 28 10:26 run_atlas
[2023-05-28 10:52:34] -rw-r--r-- 1 boinc boinc      112 May 28 10:26 job.xml
[2023-05-28 10:52:34] -rw-r--r-- 2 boinc boinc 37438704 May 28 10:26 EVNT.04972714._000033.pool.root.1
[2023-05-28 10:52:34] -rw-r--r-- 2 boinc boinc    17604 May 28 10:26 start_atlas.sh
[2023-05-28 10:52:34] drwxrwx--x 2 boinc boinc     4096 May 28 10:26 shared
[2023-05-28 10:52:34] -rw-r--r-- 2 boinc boinc   403731 May 28 10:26 input.tar.gz
[2023-05-28 10:52:34] -rw-r--r-- 1 boinc boinc     9118 May 28 10:26 init_data.xml
[2023-05-28 10:52:34] -rw-r--r-- 1 boinc boinc        0 May 28 10:26 boinc_lockfile
[2023-05-28 10:52:34] -rw-r--r-- 1 boinc boinc     2758 May 28 10:26 pandaJob.out
[2023-05-28 10:52:34] -rw------- 1 boinc boinc      424 May 28 10:26 setup.sh.local
[2023-05-28 10:52:34] -rw------- 1 boinc boinc  1016124 May 28 10:26 agis_schedconf.cvmfs.json
[2023-05-28 10:52:34] -rw------- 1 boinc boinc  1419598 May 28 10:27 cric_ddmendpoints.json
[2023-05-28 10:52:34] drwx------ 4 boinc boinc     4096 May 28 10:28 pilot3
[2023-05-28 10:52:34] -rw------- 1 boinc boinc  1237696 May 28 10:46 output.1.07d7f45d-a74f-4c01-9dca-8ea2c1cd720c_15263.pool.root
[2023-05-28 10:52:34] -rw-r--r-- 1 boinc boinc      533 May 28 10:46 boinc_task_state.xml
[2023-05-28 10:52:34] -rw------- 1 boinc boinc     1020 May 28 10:46 memory_monitor_summary.json
[2023-05-28 10:52:34] -rw------- 1 boinc boinc   154986 May 28 10:49 07d7f45d-a74f-4c01-9dca-8ea2c1cd720c_15263.1.job.log.tgz
[2023-05-28 10:52:34] -rw------- 1 boinc boinc     6578 May 28 10:52 heartbeat.json
[2023-05-28 10:52:34] -rw-r--r-- 1 boinc boinc     8192 May 28 10:52 boinc_mmap_file
[2023-05-28 10:52:34] -rw-r--r-- 1 boinc boinc       25 May 28 10:52 wrapper_checkpoint.txt
[2023-05-28 10:52:34] -rw------- 1 boinc boinc     2971 May 28 10:52 pilotlog.txt
[2023-05-28 10:52:34] -rw------- 1 boinc boinc   118469 May 28 10:52 07d7f45d-a74f-4c01-9dca-8ea2c1cd720c_15263.1.job.log
[2023-05-28 10:52:34] -rw------- 1 boinc boinc      464 May 28 10:52 output.list
[2023-05-28 10:52:34] -rw-r--r-- 1 boinc boinc      748 May 28 10:52 runtime_log
[2023-05-28 10:52:34] -rw------- 1 boinc boinc  1525760 May 28 10:52 result.tar.gz
[2023-05-28 10:52:34] -rw-r--r-- 1 boinc boinc    11958 May 28 10:52 runtime_log.err
[2023-05-28 10:52:34] -rw------- 1 boinc boinc      629 May 28 10:52 GZINDmHMYN3n7Olcko1bjSoqABFKDmABFKDm7AsVDm3PKKDmctFwnm.diag
[2023-05-28 10:52:34] -rw-r--r-- 1 boinc boinc    22456 May 28 10:52 stderr.txt
[2023-05-28 10:52:34] HITS file was successfully produced:
[2023-05-28 10:52:34] -rw------- 1 boinc boinc 1237696 May 28 10:46 shared/HITS.pool.root.1
[2023-05-28 10:52:34]  *** Contents of shared directory: ***
[2023-05-28 10:52:34] total 39684
[2023-05-28 10:52:34] -rw-r--r-- 2 boinc boinc 37438704 May 28 10:26 ATLAS.root_0
[2023-05-28 10:52:34] -rw-r--r-- 2 boinc boinc    17604 May 28 10:26 start_atlas.sh
[2023-05-28 10:52:34] -rw-r--r-- 2 boinc boinc   403731 May 28 10:26 input.tar.gz
[2023-05-28 10:52:34] -rw------- 1 boinc boinc  1237696 May 28 10:46 HITS.pool.root.1
[2023-05-28 10:52:34] -rw------- 1 boinc boinc  1525760 May 28 10:52 result.tar.gz
10:52:36 (1181472): run_atlas exited; CPU time 640.529693
10:52:36 (1181472): called boinc_finish(0)

</stderr_txt>
]]>

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