Name NWVNDm4RlO3n7Olcko1bjSoqABFKDmABFKDm7AsVDmffKKDmQQKrDn_1
Workunit 2309846
Created 1 Jun 2023, 0:47:52 UTC
Sent 1 Jun 2023, 1:00:45 UTC
Report deadline 8 Jun 2023, 1:00:45 UTC
Received 1 Jun 2023, 1:25:27 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 4759
Run time 15 min 45 sec
CPU time 4 min 52 sec
Validate state Valid
Credit 8.70
Device peak FLOPS 3.77 GFLOPS
Application version ATLAS Simulation v3.01 (vbox64_mt_mcore_atlas)
windows_x86_64
Peak working set size 77.60 MB
Peak swap size 77.93 MB
Peak disk usage 638.60 MB

Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
2023-05-31 21:04:35 (8828): Detected: vboxwrapper 26206
2023-05-31 21:04:35 (8828): Detected: BOINC client v7.20.2
2023-05-31 21:04:36 (8828): Detected: VirtualBox VboxManage Interface (Version: 6.1.16)
2023-05-31 21:04:37 (8828): Successfully copied 'init_data.xml' to the shared directory.
2023-05-31 21:04:37 (8828): Create VM. (boinc_c09945485ab4a2da, slot#11)
2023-05-31 21:04:38 (8828): Setting Memory Size for VM. (4100MB)
2023-05-31 21:04:38 (8828): Setting CPU Count for VM. (1)
2023-05-31 21:04:38 (8828): Setting Chipset Options for VM.
2023-05-31 21:04:38 (8828): Setting Graphics Controller Options for VM.
2023-05-31 21:04:39 (8828): Setting Boot Options for VM.
2023-05-31 21:04:39 (8828): Setting Network Configuration for NAT.
2023-05-31 21:04:39 (8828): Enabling VM Network Access.
2023-05-31 21:04:39 (8828): Disabling USB Support for VM.
2023-05-31 21:04:40 (8828): Disabling COM Port Support for VM.
2023-05-31 21:04:40 (8828): Disabling LPT Port Support for VM.
2023-05-31 21:04:40 (8828): Disabling Audio Support for VM.
2023-05-31 21:04:41 (8828): Disabling Clipboard Support for VM.
2023-05-31 21:04:41 (8828): Disabling Drag and Drop Support for VM.
2023-05-31 21:04:41 (8828): Adding storage controller(s) to VM.
2023-05-31 21:04:41 (8828): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2023-05-31 21:04:42 (8828): Adding VirtualBox Guest Additions to VM.
2023-05-31 21:04:43 (8828): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2023-05-31 21:04:43 (8828): forwarding host port 7743 to guest port 80
2023-05-31 21:04:43 (8828): Enabling remote desktop for VM.
2023-05-31 21:04:43 (8828): Required extension pack not installed, remote desktop not enabled.
2023-05-31 21:04:43 (8828): Enabling shared directory for VM.
2023-05-31 21:04:44 (8828): Starting VM using VBoxManage interface. (boinc_c09945485ab4a2da, slot#11)
2023-05-31 21:04:51 (8828): Successfully started VM. (PID = '1628')
2023-05-31 21:04:51 (8828): Reporting VM Process ID to BOINC.
2023-05-31 21:04:51 (8828): Guest Log: BIOS: VirtualBox 6.1.16
2023-05-31 21:04:51 (8828): Guest Log: CPUID EDX: 0x178bfbff
2023-05-31 21:04:51 (8828): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2023-05-31 21:04:51 (8828): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2023-05-31 21:04:51 (8828): VM state change detected. (old = 'poweredoff', new = 'running')
2023-05-31 21:04:51 (8828): Detected: Web Application Enabled (http://localhost:7743)
2023-05-31 21:04:51 (8828): Preference change detected
2023-05-31 21:04:51 (8828): Setting CPU throttle for VM. (90%)
2023-05-31 21:04:52 (8828): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 900 seconds) or (Vbox_job.xml: 900 seconds))
2023-05-31 21:04:53 (8828): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2023-05-31 21:04:53 (8828): Guest Log: BIOS: Booting from Hard Disk...
2023-05-31 21:04:58 (8828): Guest Log: BIOS: KBD: unsupported int 16h function 03
2023-05-31 21:04:58 (8828): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2023-05-31 21:04:58 (8828): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2023-05-31 21:04:58 (8828): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2023-05-31 21:04:58 (8828): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2023-05-31 21:04:58 (8828): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2023-05-31 21:04:58 (8828): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2023-05-31 21:04:58 (8828): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2023-05-31 21:04:58 (8828): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2023-05-31 21:04:58 (8828): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2023-05-31 21:04:58 (8828): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2023-05-31 21:04:58 (8828): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2023-05-31 21:04:58 (8828): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2023-05-31 21:04:58 (8828): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2023-05-31 21:04:58 (8828): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2023-05-31 21:04:58 (8828): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2023-05-31 21:04:58 (8828): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2023-05-31 21:04:58 (8828): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2023-05-31 21:04:58 (8828): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2023-05-31 21:04:58 (8828): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2023-05-31 21:04:58 (8828): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2023-05-31 21:04:58 (8828): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2023-05-31 21:04:58 (8828): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2023-05-31 21:04:58 (8828): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2023-05-31 21:04:58 (8828): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2023-05-31 21:04:58 (8828): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2023-05-31 21:04:58 (8828): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2023-05-31 21:04:58 (8828): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2023-05-31 21:04:58 (8828): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2023-05-31 21:04:58 (8828): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2023-05-31 21:04:58 (8828): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2023-05-31 21:04:58 (8828): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2023-05-31 21:05:08 (8828): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2023-05-31 21:05:08 (8828): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2023-05-31 21:05:29 (8828): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2023-05-31 21:05:29 (8828): Guest Log: 00:00:00.000232 main     Log opened 2023-05-31T21:05:26.385588000Z
2023-05-31 21:05:29 (8828): Guest Log: 00:00:00.000397 main     OS Product: Linux
2023-05-31 21:05:29 (8828): Guest Log: 00:00:00.000486 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2023-05-31 21:05:29 (8828): Guest Log: 00:00:00.000547 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2023-05-31 21:05:29 (8828): Guest Log: 00:00:00.000606 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2023-05-31 21:05:29 (8828): Guest Log: 00:00:00.000607 main     Process ID: 1252
2023-05-31 21:05:29 (8828): Guest Log: 00:00:00.000608 main     Package type: LINUX_64BITS_GENERIC
2023-05-31 21:05:29 (8828): Guest Log: 00:00:00.002567 main     5.2.32 r132073 started. Verbose level = 0
2023-05-31 21:05:29 (8828): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2023-05-31 21:05:29 (8828): Guest Log: [INFO] Mounting shared directory
2023-05-31 21:05:29 (8828): Guest Log: [INFO] Checking for init_data.xml
2023-05-31 21:05:39 (8828): Guest Log: 00:00:10.055869 timesync vgsvcTimeSyncWorker: Radical guest time change: 14 412 003 679 000ns (GuestNow=1 685 581 538 411 926 000 ns GuestLast=1 685 567 126 408 247 000 ns fSetTimeLastLoop=true )
2023-05-31 21:05:50 (8828): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2023-05-31 21:05:50 (8828): Guest Log: [INFO] Detected branch: dev
2023-05-31 21:05:52 (8828): Guest Log: This is the dev version of the ATLAS job wrapper
2023-05-31 21:05:52 (8828): Guest Log: Copying input files
2023-05-31 21:05:55 (8828): Guest Log: Copied input files into RunAtlas.
2023-05-31 21:05:55 (8828): Guest Log: This VM did not configure a local http proxy via BOINC.
2023-05-31 21:05:55 (8828): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2023-05-31 21:05:55 (8828): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2023-05-31 21:05:55 (8828): Guest Log: Further information can be found at the LHC@home message board.
2023-05-31 21:06:51 (8828): Guest Log: Running cvmfs_config stat atlas.cern.ch
2023-05-31 21:06:57 (8828): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2023-05-31 21:06:57 (8828): Guest Log: 2.6.3.0 1535 1 30076 119626 3 1 3116374 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2023-05-31 21:07:04 (8828): Guest Log: copied the webapp to /var/www
2023-05-31 21:07:04 (8828): Guest Log: core_number=1
2023-05-31 21:07:09 (8828): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2023-05-31 21:07:09 (8828): Guest Log:  *** Starting ATLAS job. (PandaID=5861520307 taskID=NULL&cor) ***
2023-05-31 21:24:25 (8828): Guest Log:  *** Job finished ***
2023-05-31 21:24:25 (8828): Guest Log:  *** The last 20 lines of the pilot log: ***
2023-05-31 21:24:25 (8828): Guest Log:  *** Error codes and diagnostics ***
2023-05-31 21:24:25 (8828): Guest Log:     "exeErrorCode": 0,
2023-05-31 21:24:25 (8828): Guest Log:     "exeErrorDiag": "",
2023-05-31 21:24:25 (8828): Guest Log:     "pilotErrorCode": 1305,
2023-05-31 21:24:25 (8828): Guest Log:     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute 2023-06-01 01:18:05,084 CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a SIGSEGV signal (exit code 139)",
2023-05-31 21:24:25 (8828): Guest Log:  *** Listing of results directory ***
2023-05-31 21:24:25 (8828): Guest Log: total 3568
2023-05-31 21:24:25 (8828): Guest Log: -rw-r--r--. 1 atlas atlas  393247 Jun  1 00:24 pilot3.tar.gz
2023-05-31 21:24:25 (8828): Guest Log: -rwx------. 1 atlas atlas   27811 Jun  1 00:34 runpilot2-wrapper.sh
2023-05-31 21:24:25 (8828): Guest Log: -rw-r--r--. 1 atlas atlas    4388 Jun  1 00:34 queuedata.json
2023-05-31 21:24:25 (8828): Guest Log: -rwxr-xr-x. 1 atlas atlas    8960 Jun  1 01:05 init_data.xml
2023-05-31 21:24:25 (8828): Guest Log: -rwxr-xr-x. 1 atlas atlas  403723 Jun  1 01:05 input.tar.gz
2023-05-31 21:24:25 (8828): Guest Log: -rwxr-xr-x. 1 atlas atlas   17600 Jun  1 01:05 start_atlas.sh
2023-05-31 21:24:25 (8828): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Jun  1 01:05 EVNT.04972714._000034.pool.root.1 -> /data/./ATLAS.root_0
2023-05-31 21:24:25 (8828): Guest Log: -rw-r--r--. 1 atlas atlas    2753 Jun  1 01:07 pandaJob.out
2023-05-31 21:24:25 (8828): Guest Log: -rw-------. 1 atlas atlas     424 Jun  1 01:07 setup.sh.local
2023-05-31 21:24:25 (8828): Guest Log: -rw-------. 1 atlas atlas 1416894 Jun  1 01:10 cric_ddmendpoints.json
2023-05-31 21:24:25 (8828): Guest Log: -rw-------. 1 atlas atlas 1018193 Jun  1 01:10 agis_schedconf.cvmfs.json
2023-05-31 21:24:25 (8828): Guest Log: drwx------. 4 atlas atlas     284 Jun  1 01:12 pilot3
2023-05-31 21:24:25 (8828): Guest Log: -rw-------. 1 atlas atlas    1014 Jun  1 01:18 memory_monitor_summary.json
2023-05-31 21:24:25 (8828): Guest Log: -rw-------. 1 atlas atlas   50355 Jun  1 01:18 e143936a-8147-413a-acfa-f576df4263c5_1720.1.job.log.tgz
2023-05-31 21:24:25 (8828): Guest Log: -rw-------. 1 atlas atlas    7409 Jun  1 01:23 heartbeat.json
2023-05-31 21:24:25 (8828): Guest Log: -rw-------. 1 atlas atlas    2930 Jun  1 01:24 pilotlog.txt
2023-05-31 21:24:25 (8828): Guest Log: -rw-------. 1 atlas atlas   82932 Jun  1 01:24 e143936a-8147-413a-acfa-f576df4263c5_1720.1.job.log
2023-05-31 21:24:25 (8828): Guest Log: -rw-------. 1 atlas atlas     225 Jun  1 01:24 output.list
2023-05-31 21:24:25 (8828): Guest Log: -rw-r--r--. 1 atlas atlas     683 Jun  1 01:24 runtime_log
2023-05-31 21:24:25 (8828): Guest Log: -rw-------. 1 atlas atlas  153600 Jun  1 01:24 result.tar.gz
2023-05-31 21:24:25 (8828): Guest Log: -rw-r--r--. 1 atlas atlas   11177 Jun  1 01:24 runtime_log.err
2023-05-31 21:24:25 (8828): Guest Log: -rw-------. 1 atlas atlas     628 Jun  1 01:24 NWVNDm4RlO3n7Olcko1bjSoqABFKDmABFKDm7AsVDmffKKDmQQKrDn.diag
2023-05-31 21:24:25 (8828): Guest Log: Looking for outputfile output.1.e143936a-8147-413a-acfa-f576df4263c5_1720.pool.root
2023-05-31 21:24:25 (8828): Guest Log: No HITS file was produced
2023-05-31 21:24:25 (8828): Guest Log: Successfully finished the ATLAS job!
2023-05-31 21:24:25 (8828): Guest Log: Copying the results back to the shared directory!
2023-05-31 21:24:25 (8828): Guest Log:  *** Contents of shared directory: ***
2023-05-31 21:24:25 (8828): Guest Log: total 37296
2023-05-31 21:24:25 (8828): Guest Log: -rwxrwxrwx. 1 root root 37595586 Jun  1 01:04 ATLAS.root_0
2023-05-31 21:24:25 (8828): Guest Log: -rwxrwxrwx. 1 root root     8960 Jun  1 01:04 init_data.xml
2023-05-31 21:24:25 (8828): Guest Log: -rwxrwxrwx. 1 root root   403723 Jun  1 01:03 input.tar.gz
2023-05-31 21:24:25 (8828): Guest Log: -rwxrwxrwx. 1 root root   153600 Jun  1 01:24 result.tar.gz
2023-05-31 21:24:25 (8828): Guest Log: -rwxrwxrwx. 1 root root    17600 Jun  1 01:01 start_atlas.sh
2023-05-31 21:24:25 (8828): Guest Log:  *** Success! Shutting down the machine. ***
2023-05-31 21:24:26 (8828): VM Completion File Detected.
2023-05-31 21:24:26 (8828): Powering off VM.
2023-05-31 21:24:27 (8828): Successfully stopped VM.
2023-05-31 21:24:27 (8828): Deregistering VM. (boinc_c09945485ab4a2da, slot#11)
2023-05-31 21:24:27 (8828): Removing network bandwidth throttle group from VM.
2023-05-31 21:24:27 (8828): Removing VM from VirtualBox.
21:24:32 (8828): called boinc_finish(0)

</stderr_txt>
]]>


©2024 CERN