Name WCMODmFsHV3n7Olcko1bjSoqABFKDmABFKDm7AsVDmBjLKDmO2S4mm_0
Workunit 2313172
Created 19 Jun 2023, 0:24:48 UTC
Sent 19 Jun 2023, 0:29:13 UTC
Report deadline 26 Jun 2023, 0:29:13 UTC
Received 19 Jun 2023, 0:55:41 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 1498
Run time 24 min 4 sec
CPU time 8 min 10 sec
Validate state Valid
Credit 17.36
Device peak FLOPS 13.02 GFLOPS
Application version ATLAS Simulation v3.01 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 1.50 GB
Peak swap size 2.12 GB
Peak disk usage 78.49 MB

Stderr output

<core_client_version>7.4.25</core_client_version>
<![CDATA[
<stderr_txt>
01:30:18 (2796): wrapper (7.7.26015): starting
01:30:18 (2796): wrapper: running run_atlas (--nthreads 4)
[2023-06-19 01:30:18] Arguments: --nthreads 4
[2023-06-19 01:30:18] Threads: 4
[2023-06-19 01:30:18] Checking for CVMFS
[2023-06-19 01:30:23] Probing /cvmfs/atlas.cern.ch... OK
[2023-06-19 01:30:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2023-06-19 01:30:28] Running cvmfs_config stat atlas.cern.ch
[2023-06-19 01:30:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2023-06-19 01:30:29] 2.9.0.0 3018 0 24692 120310 3 1 2321866 4194304 0 130560 0 0 0.000 827 253 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.100.152:3128 1
[2023-06-19 01:30:29] CVMFS is ok
[2023-06-19 01:30:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2023-06-19 01:30:29] Checking for apptainer binary...
[2023-06-19 01:30:29] Using apptainer found in PATH at /usr/bin/apptainer
[2023-06-19 01:30:29] Running /usr/bin/apptainer --version
[2023-06-19 01:30:29] apptainer version 1.0.3
[2023-06-19 01:30:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2023-06-19 01:30:30] TeeC16
[2023-06-19 01:30:30] apptainer works
[2023-06-19 01:30:30] Set ATHENA_PROC_NUMBER=4
[2023-06-19 01:30:30] Set ATHENA_CORE_NUMBER=4
[2023-06-19 01:30:30] Starting ATLAS job with PandaID=5879983293
[2023-06-19 01:30:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/m/BOINC/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2023-06-19 01:54:20]  *** The last 200 lines of the pilot log: ***
[2023-06-19 01:54:20] 2023-06-19 00:53:25,022 | INFO     | maximum number of monitored processes: 5
[2023-06-19 01:54:20] 2023-06-19 00:53:27,525 | INFO     | monitor loop #207: job 0:5879983293 is in state 'stageout'
[2023-06-19 01:54:20] 2023-06-19 00:53:27,565 | INFO     | number of running child processes to parent process 13800: 1
[2023-06-19 01:54:20] 2023-06-19 00:53:27,566 | INFO     | maximum number of monitored processes: 5
[2023-06-19 01:54:20] 2023-06-19 00:53:30,069 | INFO     | monitor loop #208: job 0:5879983293 is in state 'stageout'
[2023-06-19 01:54:20] 2023-06-19 00:53:30,110 | INFO     | number of running child processes to parent process 13800: 1
[2023-06-19 01:54:20] 2023-06-19 00:53:30,111 | INFO     | maximum number of monitored processes: 5
[2023-06-19 01:54:20] 2023-06-19 00:53:32,614 | INFO     | monitor loop #209: job 0:5879983293 is in state 'stageout'
[2023-06-19 01:54:20] 2023-06-19 00:53:32,653 | INFO     | number of running child processes to parent process 13800: 1
[2023-06-19 01:54:20] 2023-06-19 00:53:32,654 | INFO     | maximum number of monitored processes: 5
[2023-06-19 01:54:20] 2023-06-19 00:53:35,157 | INFO     | monitor loop #210: job 0:5879983293 is in state 'stageout'
[2023-06-19 01:54:20] 2023-06-19 00:53:35,199 | INFO     | number of running child processes to parent process 13800: 1
[2023-06-19 01:54:20] 2023-06-19 00:53:35,199 | INFO     | maximum number of monitored processes: 5
[2023-06-19 01:54:20] 2023-06-19 00:53:37,702 | INFO     | monitor loop #211: job 0:5879983293 is in state 'stageout'
[2023-06-19 01:54:20] 2023-06-19 00:53:37,740 | INFO     | number of running child processes to parent process 13800: 1
[2023-06-19 01:54:20] 2023-06-19 00:53:37,740 | INFO     | maximum number of monitored processes: 5
[2023-06-19 01:54:20] 2023-06-19 00:53:40,243 | INFO     | monitor loop #212: job 0:5879983293 is in state 'stageout'
[2023-06-19 01:54:20] 2023-06-19 00:53:40,286 | INFO     | number of running child processes to parent process 13800: 1
[2023-06-19 01:54:20] 2023-06-19 00:53:40,287 | INFO     | maximum number of monitored processes: 5
[2023-06-19 01:54:20] 2023-06-19 00:53:42,790 | INFO     | monitor loop #213: job 0:5879983293 is in state 'stageout'
[2023-06-19 01:54:20] 2023-06-19 00:53:42,829 | INFO     | number of running child processes to parent process 13800: 1
[2023-06-19 01:54:20] 2023-06-19 00:53:42,830 | INFO     | maximum number of monitored processes: 5
[2023-06-19 01:54:20] 2023-06-19 00:53:45,333 | INFO     | monitor loop #214: job 0:5879983293 is in state 'stageout'
[2023-06-19 01:54:20] 2023-06-19 00:53:45,374 | INFO     | number of running child processes to parent process 13800: 1
[2023-06-19 01:54:20] 2023-06-19 00:53:45,375 | INFO     | maximum number of monitored processes: 5
[2023-06-19 01:54:20] 2023-06-19 00:53:47,878 | INFO     | monitor loop #215: job 0:5879983293 is in state 'stageout'
[2023-06-19 01:54:20] 2023-06-19 00:53:47,913 | INFO     | number of running child processes to parent process 13800: 1
[2023-06-19 01:54:20] 2023-06-19 00:53:47,914 | INFO     | maximum number of monitored processes: 5
[2023-06-19 01:54:20] 2023-06-19 00:53:48,939 | INFO     | [attempt=3/3] loading data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json
[2023-06-19 01:54:20] 2023-06-19 00:53:49,082 | WARNING  | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: 
[2023-06-19 01:54:20] 2023-06-19 00:53:49,082 | WARNING  | cache file=/home/m/BOINC/slots/2/agis_ddmendpoints.agis.ALL.json is not available: [Errno 2] No such file or directory: '/home/m/BOINC/slots/2/agis_ddmendpoints.ag
[2023-06-19 01:54:20] 2023-06-19 00:53:49,130 | INFO     | transferring file d8bb467d-0c28-4f16-8ae2-8b057599de08_90002.1.job.log.tgz from /home/m/BOINC/slots/2/PanDA_Pilot-5879983293/d8bb467d-0c28-4f16-8ae2-8b057599de08_9
[2023-06-19 01:54:20] 2023-06-19 00:53:49,130 | INFO     | executing command: /usr/bin/env mv /home/m/BOINC/slots/2/PanDA_Pilot-5879983293/d8bb467d-0c28-4f16-8ae2-8b057599de08_90002.1.job.log.tgz /home/m/BOINC/slots/2/d8bb
[2023-06-19 01:54:20] 2023-06-19 00:53:49,149 | INFO     | Adding to output.list: d8bb467d-0c28-4f16-8ae2-8b057599de08_90002.1.job.log.tgz davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/e0/4a/d8bb467d-0c28-
[2023-06-19 01:54:20] 2023-06-19 00:53:49,149 | INFO     | executing command: ps aux -q 6556
[2023-06-19 01:54:20] 2023-06-19 00:53:49,172 | INFO     | summary of transferred files:
[2023-06-19 01:54:20] 2023-06-19 00:53:49,172 | INFO     |  -- lfn=d8bb467d-0c28-4f16-8ae2-8b057599de08_90002.1.job.log.tgz, status_code=0, status=transferred
[2023-06-19 01:54:20] 2023-06-19 00:53:49,173 | INFO     | stage-out finished correctly
[2023-06-19 01:54:20] 2023-06-19 00:53:50,417 | INFO     | monitor loop #216: job 0:5879983293 is in state 'finished'
[2023-06-19 01:54:20] 2023-06-19 00:53:50,417 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-06-19 01:54:20] 2023-06-19 00:53:52,215 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2023-06-19 01:54:20] 2023-06-19 00:53:52,920 | INFO     | monitor loop #217: job 0:5879983293 is in state 'finished'
[2023-06-19 01:54:20] 2023-06-19 00:53:52,921 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-06-19 01:54:20] 2023-06-19 00:53:53,027 | INFO     | job 5879983293 has state=finished
[2023-06-19 01:54:20] 2023-06-19 00:53:53,027 | INFO     | preparing for final server update for job 5879983293 in state='finished'
[2023-06-19 01:54:20] 2023-06-19 00:53:53,028 | INFO     | this job has now completed (state=finished)
[2023-06-19 01:54:20] 2023-06-19 00:53:53,028 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2023-06-19 01:54:20] 2023-06-19 00:53:53,028 | INFO     | job 5879983293 has finished - writing final server update
[2023-06-19 01:54:20] 2023-06-19 00:53:53,030 | WARNING  | wrong length of table data, x=[1687135226.0, 1687135287.0, 1687135348.0, 1687135409.0, 1687135470.0], y=[1161838.0, 1640228.0, 1648678.0, 1660362.0, 1662084.0] (mu
[2023-06-19 01:54:20] 2023-06-19 00:53:53,030 | INFO     | total number of processed events: 2 (read)
[2023-06-19 01:54:20] 2023-06-19 00:53:53,049 | INFO     | executing command: lscpu
[2023-06-19 01:54:20] 2023-06-19 00:53:53,070 | INFO     | found 2 cores (2 cores per socket, 1 sockets)
[2023-06-19 01:54:20] 2023-06-19 00:53:53,071 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2023-06-19 01:54:20] 2023-06-19 00:53:53,100 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2023-06-19 01:54:20] 2023-06-19 00:53:55,424 | INFO     | monitor loop #218: job 0:5879983293 is in state 'finished'
[2023-06-19 01:54:20] 2023-06-19 00:53:55,424 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-06-19 01:54:20] 2023-06-19 00:53:57,929 | INFO     | monitor loop #219: job 0:5879983293 is in state 'finished'
[2023-06-19 01:54:20] 2023-06-19 00:53:57,929 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-06-19 01:54:20] 2023-06-19 00:54:00,432 | INFO     | monitor loop #220: job 0:5879983293 is in state 'finished'
[2023-06-19 01:54:20] 2023-06-19 00:54:00,433 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-06-19 01:54:20] 2023-06-19 00:54:01,865 | INFO     | executing command: python3 /home/m/BOINC/slots/2/pilot3/pilot/scripts/cpu_arch.py --alg gcc
[2023-06-19 01:54:20] 2023-06-19 00:54:01,964 | INFO     | using path: /home/m/BOINC/slots/2/PanDA_Pilot-5879983293/memory_monitor_summary.json (trf name=prmon)
[2023-06-19 01:54:20] 2023-06-19 00:54:01,965 | INFO     | extracted standard info from prmon json
[2023-06-19 01:54:20] 2023-06-19 00:54:01,965 | INFO     | extracted standard memory fields from prmon json
[2023-06-19 01:54:20] 2023-06-19 00:54:01,965 | INFO     | ..............................
[2023-06-19 01:54:20] 2023-06-19 00:54:01,965 | INFO     | . Timing measurements:
[2023-06-19 01:54:20] 2023-06-19 00:54:01,966 | INFO     | . get job = 68 s
[2023-06-19 01:54:20] 2023-06-19 00:54:01,966 | INFO     | . initial setup = 74 s
[2023-06-19 01:54:20] 2023-06-19 00:54:01,966 | INFO     | . payload setup = 11 s
[2023-06-19 01:54:20] 2023-06-19 00:54:01,966 | INFO     | . stage-in = 68 s
[2023-06-19 01:54:20] 2023-06-19 00:54:01,966 | INFO     | . payload execution = 714 s
[2023-06-19 01:54:20] 2023-06-19 00:54:01,966 | INFO     | . stage-out = 395 s
[2023-06-19 01:54:20] 2023-06-19 00:54:01,966 | INFO     | ..............................
[2023-06-19 01:54:20] 2023-06-19 00:54:02,029 | INFO     | 
[2023-06-19 01:54:20] 2023-06-19 00:54:02,029 | INFO     | job summary report
[2023-06-19 01:54:20] 2023-06-19 00:54:02,029 | INFO     | --------------------------------------------------
[2023-06-19 01:54:20] 2023-06-19 00:54:02,030 | INFO     | PanDA job id: 5879983293
[2023-06-19 01:54:20] 2023-06-19 00:54:02,030 | INFO     | task id: NULL
[2023-06-19 01:54:20] 2023-06-19 00:54:02,030 | INFO     | errors: (none)
[2023-06-19 01:54:20] 2023-06-19 00:54:02,030 | INFO     | status: LOG_TRANSFER = DONE 
[2023-06-19 01:54:20] 2023-06-19 00:54:02,030 | INFO     | pilot state: finished 
[2023-06-19 01:54:20] 2023-06-19 00:54:02,030 | INFO     | transexitcode: 0
[2023-06-19 01:54:20] 2023-06-19 00:54:02,030 | INFO     | exeerrorcode: 0
[2023-06-19 01:54:20] 2023-06-19 00:54:02,030 | INFO     | exeerrordiag: 
[2023-06-19 01:54:20] 2023-06-19 00:54:02,030 | INFO     | exitcode: 0
[2023-06-19 01:54:20] 2023-06-19 00:54:02,030 | INFO     | exitmsg: OK
[2023-06-19 01:54:20] 2023-06-19 00:54:02,031 | INFO     | cpuconsumptiontime: 499 s
[2023-06-19 01:54:20] 2023-06-19 00:54:02,031 | INFO     | nevents: 2
[2023-06-19 01:54:20] 2023-06-19 00:54:02,031 | INFO     | neventsw: 0
[2023-06-19 01:54:20] 2023-06-19 00:54:02,031 | INFO     | pid: 13800
[2023-06-19 01:54:20] 2023-06-19 00:54:02,031 | INFO     | pgrp: 13800
[2023-06-19 01:54:20] 2023-06-19 00:54:02,031 | INFO     | corecount: 4
[2023-06-19 01:54:20] 2023-06-19 00:54:02,031 | INFO     | event service: False
[2023-06-19 01:54:20] 2023-06-19 00:54:02,031 | INFO     | sizes: {0: 2505319, 1: 2506854, 12: 2507000, 22: 2507028, 33: 2507056, 44: 2507084, 54: 2507240, 65: 2507268, 73: 2507356, 75: 2507384, 729: 2528645, 1125: 2537953
[2023-06-19 01:54:20] 2023-06-19 00:54:02,031 | INFO     | --------------------------------------------------
[2023-06-19 01:54:20] 2023-06-19 00:54:02,031 | INFO     | 
[2023-06-19 01:54:20] 2023-06-19 00:54:02,032 | INFO     | executing command: ls -lF /home/m/BOINC/slots/2
[2023-06-19 01:54:20] 2023-06-19 00:54:02,051 | INFO     | queue jobs had 0 job(s) [purged]
[2023-06-19 01:54:20] 2023-06-19 00:54:02,052 | INFO     | queue payloads had 0 job(s) [purged]
[2023-06-19 01:54:20] 2023-06-19 00:54:02,052 | INFO     | queue data_in had 0 job(s) [purged]
[2023-06-19 01:54:20] 2023-06-19 00:54:02,052 | INFO     | queue data_out had 0 job(s) [purged]
[2023-06-19 01:54:20] 2023-06-19 00:54:02,052 | INFO     | queue current_data_in had 0 job(s) [purged]
[2023-06-19 01:54:20] 2023-06-19 00:54:02,052 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2023-06-19 01:54:20] 2023-06-19 00:54:02,052 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2023-06-19 01:54:20] 2023-06-19 00:54:02,053 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2023-06-19 01:54:20] 2023-06-19 00:54:02,053 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2023-06-19 01:54:20] 2023-06-19 00:54:02,053 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2023-06-19 01:54:20] 2023-06-19 00:54:02,053 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2023-06-19 01:54:20] 2023-06-19 00:54:02,053 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2023-06-19 01:54:20] 2023-06-19 00:54:02,053 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2023-06-19 01:54:20] 2023-06-19 00:54:02,053 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2023-06-19 01:54:20] 2023-06-19 00:54:02,053 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2023-06-19 01:54:20] 2023-06-19 00:54:02,053 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2023-06-19 01:54:20] 2023-06-19 00:54:02,054 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2023-06-19 01:54:20] 2023-06-19 00:54:02,054 | INFO     | queue completed_jobids has 1 job(s)
[2023-06-19 01:54:20] 2023-06-19 00:54:02,054 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2023-06-19 01:54:20] 2023-06-19 00:54:02,054 | INFO     | queue messages had 0 job(s) [purged]
[2023-06-19 01:54:20] 2023-06-19 00:54:02,054 | INFO     | job 5879983293 has completed (purged errors)
[2023-06-19 01:54:20] 2023-06-19 00:54:02,054 | INFO     | overall cleanup function is called
[2023-06-19 01:54:20] 2023-06-19 00:54:03,061 | INFO     | --- collectZombieJob: --- 10, [13800]
[2023-06-19 01:54:20] 2023-06-19 00:54:03,061 | INFO     | zombie collector trying to kill pid 13800
[2023-06-19 01:54:20] 2023-06-19 00:54:03,062 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2023-06-19 01:54:20] 2023-06-19 00:54:04,067 | INFO     | collected zombie processes
[2023-06-19 01:54:20] 2023-06-19 00:54:04,067 | INFO     | will now attempt to kill all subprocesses of pid=13800
[2023-06-19 01:54:20] 2023-06-19 00:54:04,112 | INFO     | process IDs to be killed: [13800] (in reverse order)
[2023-06-19 01:54:20] 2023-06-19 00:54:04,146 | WARNING  | found no corresponding commands to process id(s)
[2023-06-19 01:54:20] 2023-06-19 00:54:04,146 | INFO     | Do not look for orphan processes in BOINC jobs
[2023-06-19 01:54:20] 2023-06-19 00:54:04,146 | INFO     | ready for new job
[2023-06-19 01:54:20] 2023-06-19 00:54:04,146 | INFO     | pilot has finished with previous job - re-establishing logging
[2023-06-19 01:54:20] 2023-06-19 00:54:04,147 | INFO     | *****************************************
[2023-06-19 01:54:20] 2023-06-19 00:54:04,147 | INFO     | ***  PanDA Pilot version 3.6.0 (108)  ***
[2023-06-19 01:54:20] 2023-06-19 00:54:04,147 | INFO     | *****************************************
[2023-06-19 01:54:20] 2023-06-19 00:54:04,147 | INFO     | 
[2023-06-19 01:54:20] 2023-06-19 00:54:04,164 | INFO     | architecture information:
[2023-06-19 01:54:20] 2023-06-19 00:54:04,165 | INFO     | executing command: cat /etc/os-release
[2023-06-19 01:54:20] 2023-06-19 00:54:04,181 | INFO     | cat /etc/os-release:
[2023-06-19 01:54:20] NAME="CentOS Linux"
[2023-06-19 01:54:20] VERSION="7 (Core)"
[2023-06-19 01:54:20] ID="centos"
[2023-06-19 01:54:20] ID_LIKE="rhel fedora"
[2023-06-19 01:54:20] VERSION_ID="7"
[2023-06-19 01:54:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2023-06-19 01:54:20] ANSI_COLOR="0;31"
[2023-06-19 01:54:20] CPE_NAME="cpe:/o:centos:centos:7"
[2023-06-19 01:54:20] HOME_URL="https://www.centos.org/"
[2023-06-19 01:54:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2023-06-19 01:54:20] 
[2023-06-19 01:54:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2023-06-19 01:54:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2023-06-19 01:54:20] REDHAT_SUPPORT_PRODUCT="centos"
[2023-06-19 01:54:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2023-06-19 01:54:20] 
[2023-06-19 01:54:20] 2023-06-19 00:54:04,182 | INFO     | *****************************************
[2023-06-19 01:54:20] 2023-06-19 00:54:04,685 | INFO     | executing command: df -mP /home/m/BOINC/slots/2
[2023-06-19 01:54:20] 2023-06-19 00:54:04,703 | INFO     | sufficient remaining disk space (424462516224 B)
[2023-06-19 01:54:20] 2023-06-19 00:54:04,704 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2023-06-19 01:54:20] 2023-06-19 00:54:04,704 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2023-06-19 01:54:20] 2023-06-19 00:54:04,705 | INFO     | [job] retrieve thread has finished
[2023-06-19 01:54:20] 2023-06-19 00:54:04,705 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2023-06-19 01:54:20] 2023-06-19 00:54:04,705 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2023-06-19 01:54:20] 2023-06-19 00:54:04,705 | INFO     | aborting loop
[2023-06-19 01:54:20] 2023-06-19 00:54:04,706 | INFO     | found 0 job(s) in 20 queues
[2023-06-19 01:54:20] 2023-06-19 00:54:04,706 | INFO     | [job] job monitor thread has finished
[2023-06-19 01:54:20] 2023-06-19 00:54:04,706 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2023-06-19 01:54:20] 2023-06-19 00:54:04,706 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2023-06-19 01:54:20] 2023-06-19 00:54:04,760 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2023-06-19 01:54:20] 2023-06-19 00:54:05,164 | INFO     | [job] validate thread has finished
[2023-06-19 01:54:20] 2023-06-19 00:54:05,246 | INFO     | [payload] execute_payloads thread has finished
[2023-06-19 01:54:20] 2023-06-19 00:54:05,284 | INFO     | [data] copytool_in thread has finished
[2023-06-19 01:54:20] 2023-06-19 00:54:05,382 | INFO     | [job] create_data_payload thread has finished
[2023-06-19 01:54:20] 2023-06-19 00:54:05,391 | INFO     | [data] control thread has finished
[2023-06-19 01:54:20] 2023-06-19 00:54:05,526 | INFO     | [payload] validate_pre thread has finished
[2023-06-19 01:54:20] 2023-06-19 00:54:05,571 | INFO     | [payload] validate_post thread has finished
[2023-06-19 01:54:20] 2023-06-19 00:54:05,693 | INFO     | [job] control thread has finished
[2023-06-19 01:54:20] 2023-06-19 00:54:05,761 | INFO     | [data] copytool_out thread has finished
[2023-06-19 01:54:20] 2023-06-19 00:54:05,828 | INFO     | [payload] failed_post thread has finished
[2023-06-19 01:54:20] 2023-06-19 00:54:05,858 | INFO     | [payload] control thread has finished
[2023-06-19 01:54:20] 2023-06-19 00:54:07,040 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2023-06-19 01:54:20] 2023-06-19 00:54:07,040 | INFO     | [job] queue monitor thread has finished
[2023-06-19 01:54:20] 2023-06-19 00:54:07,291 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2023-06-19 01:54:20] 2023-06-19 00:54:10,291 | INFO     | [data] queue_monitor thread has finished
[2023-06-19 01:54:20] 2023-06-19 00:54:15,482 | INFO     | job.realtimelogging is not enabled
[2023-06-19 01:54:20] 2023-06-19 00:54:15,483 | INFO     | [payload] run_realtimelog thread has finished
[2023-06-19 01:54:20] 2023-06-19 00:54:15,660 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139698325075776)>', '<ExcThread(monitor, started 139697762330368)>']
[2023-06-19 01:54:20] 2023-06-19 00:54:15,755 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2023-06-19 01:54:20] 2023-06-19 00:54:15,755 | INFO     | [monitor] control thread has ended
[2023-06-19 01:54:20] 2023-06-19 00:54:20,671 | INFO     | end of generic workflow (traces error code: 0)
[2023-06-19 01:54:20] 2023-06-19 00:54:20,672 | INFO     | traces error code: 0
[2023-06-19 01:54:20] 2023-06-19 00:54:20,672 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2023-06-19 01:54:20] 2023-06-19 00:54:20,726 [wrapper] ==== pilot stdout END ====
[2023-06-19 01:54:20] 2023-06-19 00:54:20,731 [wrapper] ==== wrapper stdout RESUME ====
[2023-06-19 01:54:20] 2023-06-19 00:54:20,734 [wrapper] pilotpid: 6556
[2023-06-19 01:54:20] 2023-06-19 00:54:20,739 [wrapper] Pilot exit status: 0
[2023-06-19 01:54:20] 2023-06-19 00:54:20,752 [wrapper] pandaids: 5879983293
[2023-06-19 01:54:20] 2023-06-19 00:54:20,762 [wrapper] apfmon messages muted
[2023-06-19 01:54:20] 2023-06-19 00:54:20,767 [wrapper] Test setup, not cleaning
[2023-06-19 01:54:20] 2023-06-19 00:54:20,772 [wrapper] ==== wrapper stdout END ====
[2023-06-19 01:54:20] 2023-06-19 00:54:20,777 [wrapper] ==== wrapper stderr END ====
[2023-06-19 01:54:20] 2023-06-19 00:54:20,787 [wrapper] wrapperexiting ec=0, duration=1429
[2023-06-19 01:54:20] 2023-06-19 00:54:20,792 [wrapper] apfmon messages muted
[2023-06-19 01:54:20]  *** Error codes and diagnostics ***
[2023-06-19 01:54:20]     "exeErrorCode": 0,
[2023-06-19 01:54:20]     "exeErrorDiag": "",
[2023-06-19 01:54:20]     "pilotErrorCode": 0,
[2023-06-19 01:54:20]     "pilotErrorDiag": "",
[2023-06-19 01:54:20]  *** Listing of results directory ***
[2023-06-19 01:54:20] total 43116
[2023-06-19 01:54:20] -rw-r--r-- 1 m m   410584 Jun 19 00:39 pilot3.tar.gz
[2023-06-19 01:54:20] -rwx------ 1 m m    27010 Jun 19 01:24 runpilot2-wrapper.sh
[2023-06-19 01:54:20] -rw-r--r-- 1 m m     4388 Jun 19 01:24 queuedata.json
[2023-06-19 01:54:20] -rw-rw-r-- 1 m m      107 Jun 19 01:30 wrapper_26015_x86_64-pc-linux-gnu
[2023-06-19 01:54:20] -rwxr-xr-x 1 m m     7986 Jun 19 01:30 run_atlas
[2023-06-19 01:54:20] -rw-rw-r-- 1 m m      112 Jun 19 01:30 job.xml
[2023-06-19 01:54:20] -rw-r--r-- 2 m m    17624 Jun 19 01:30 start_atlas.sh
[2023-06-19 01:54:20] drwxrwx--x 2 m m     4096 Jun 19 01:30 shared
[2023-06-19 01:54:20] -rw-r--r-- 2 m m   421971 Jun 19 01:30 input.tar.gz
[2023-06-19 01:54:20] -rw-rw-r-- 1 m m     5726 Jun 19 01:30 init_data.xml
[2023-06-19 01:54:20] -rw-r--r-- 2 m m 37073557 Jun 19 01:30 EVNT.04972714._000021.pool.root.1
[2023-06-19 01:54:20] -rw-rw-r-- 1 m m        0 Jun 19 01:30 boinc_lockfile
[2023-06-19 01:54:20] -rw-rw-r-- 1 m m     2755 Jun 19 01:30 pandaJob.out
[2023-06-19 01:54:20] -rw------- 1 m m      424 Jun 19 01:30 setup.sh.local
[2023-06-19 01:54:20] -rw------- 1 m m  1402888 Jun 19 01:32 cric_ddmendpoints.json
[2023-06-19 01:54:20] -rw------- 1 m m  1021233 Jun 19 01:32 agis_schedconf.cvmfs.json
[2023-06-19 01:54:20] drwx------ 4 m m     4096 Jun 19 01:33 pilot3
[2023-06-19 01:54:20] -rw------- 1 m m  1440091 Jun 19 01:47 output.1.d8bb467d-0c28-4f16-8ae2-8b057599de08_90002.pool.root
[2023-06-19 01:54:20] -rw------- 1 m m     1014 Jun 19 01:47 memory_monitor_summary.json
[2023-06-19 01:54:20] -rw-rw-r-- 1 m m      533 Jun 19 01:47 boinc_task_state.xml
[2023-06-19 01:54:20] -rw------- 1 m m   161316 Jun 19 01:50 d8bb467d-0c28-4f16-8ae2-8b057599de08_90002.1.job.log.tgz
[2023-06-19 01:54:20] -rw-rw-r-- 1 m m       25 Jun 19 01:54 wrapper_checkpoint.txt
[2023-06-19 01:54:20] -rw------- 1 m m     7383 Jun 19 01:54 heartbeat.json
[2023-06-19 01:54:20] -rw-rw-r-- 1 m m     8192 Jun 19 01:54 boinc_mmap_file
[2023-06-19 01:54:20] -rw------- 1 m m     4108 Jun 19 01:54 pilotlog.txt
[2023-06-19 01:54:20] -rw------- 1 m m   195733 Jun 19 01:54 d8bb467d-0c28-4f16-8ae2-8b057599de08_90002.1.job.log
[2023-06-19 01:54:20] -rw------- 1 m m      464 Jun 19 01:54 output.list
[2023-06-19 01:54:20] -rw-rw-r-- 1 m m      748 Jun 19 01:54 runtime_log
[2023-06-19 01:54:20] -rw------- 1 m m  1812480 Jun 19 01:54 result.tar.gz
[2023-06-19 01:54:20] -rw------- 1 m m      627 Jun 19 01:54 WCMODmFsHV3n7Olcko1bjSoqABFKDmABFKDm7AsVDmBjLKDmO2S4mm.diag
[2023-06-19 01:54:20] -rw-rw-r-- 1 m m    11911 Jun 19 01:54 runtime_log.err
[2023-06-19 01:54:20] -rw-rw-r-- 1 m m    22674 Jun 19 01:54 stderr.txt
[2023-06-19 01:54:20] HITS file was successfully produced:
[2023-06-19 01:54:20] -rw------- 1 m m 1440091 Jun 19 01:47 shared/HITS.pool.root.1
[2023-06-19 01:54:20]  *** Contents of shared directory: ***
[2023-06-19 01:54:20] total 39824
[2023-06-19 01:54:20] -rw-r--r-- 2 m m    17624 Jun 19 01:30 start_atlas.sh
[2023-06-19 01:54:20] -rw-r--r-- 2 m m   421971 Jun 19 01:30 input.tar.gz
[2023-06-19 01:54:20] -rw-r--r-- 2 m m 37073557 Jun 19 01:30 ATLAS.root_0
[2023-06-19 01:54:20] -rw------- 1 m m  1440091 Jun 19 01:47 HITS.pool.root.1
[2023-06-19 01:54:20] -rw------- 1 m m  1812480 Jun 19 01:54 result.tar.gz
01:54:22 (2796): run_atlas exited; CPU time 490.683211
01:54:22 (2796): called boinc_finish(0)

</stderr_txt>
]]>


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