Name | 4jmKDmN7eV3n7Olcko1bjSoqABFKDmABFKDm7AsVDmbnLKDm7HTJwm_0 |
Workunit | 2313423 |
Created | 20 Jun 2023, 1:13:44 UTC |
Sent | 20 Jun 2023, 1:14:14 UTC |
Report deadline | 27 Jun 2023, 1:14:14 UTC |
Received | 20 Jun 2023, 1:43:46 UTC |
Server state | Over |
Outcome | Success |
Client state | Done |
Exit status | 0 (0x00000000) |
Computer ID | 1498 |
Run time | 27 min 10 sec |
CPU time | 13 min 39 sec |
Validate state | Valid |
Credit | 19.76 |
Device peak FLOPS | 13.02 GFLOPS |
Application version | ATLAS Simulation v3.01 (native_mt) x86_64-pc-linux-gnu |
Peak working set size | 1.51 GB |
Peak swap size | 2.12 GB |
Peak disk usage | 79.76 MB |
<core_client_version>7.4.25</core_client_version> <![CDATA[ <stderr_txt> 02:15:17 (31866): wrapper (7.7.26015): starting 02:15:17 (31866): wrapper: running run_atlas (--nthreads 4) [2023-06-20 02:15:17] Arguments: --nthreads 4 [2023-06-20 02:15:17] Threads: 4 [2023-06-20 02:15:17] Checking for CVMFS [2023-06-20 02:15:18] Probing /cvmfs/atlas.cern.ch... OK [2023-06-20 02:15:19] Probing /cvmfs/atlas-condb.cern.ch... OK [2023-06-20 02:15:19] Running cvmfs_config stat atlas.cern.ch [2023-06-20 02:15:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE [2023-06-20 02:15:19] 2.9.0.0 32007 0 24932 120347 3 1 2587454 4194305 0 130560 0 0 100.000 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.100.152:3128 1 [2023-06-20 02:15:19] CVMFS is ok [2023-06-20 02:15:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 [2023-06-20 02:15:19] Checking for apptainer binary... [2023-06-20 02:15:19] Using apptainer found in PATH at /usr/bin/apptainer [2023-06-20 02:15:19] Running /usr/bin/apptainer --version [2023-06-20 02:15:19] apptainer version 1.0.3 [2023-06-20 02:15:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname [2023-06-20 02:15:19] TeeC16 [2023-06-20 02:15:19] apptainer works [2023-06-20 02:15:19] Set ATHENA_PROC_NUMBER=4 [2023-06-20 02:15:19] Set ATHENA_CORE_NUMBER=4 [2023-06-20 02:15:19] Starting ATLAS job with PandaID=5881531671 [2023-06-20 02:15:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/m/BOINC/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh [2023-06-20 02:42:24] *** The last 200 lines of the pilot log: *** [2023-06-20 02:42:24] 2023-06-20 01:41:35,617 | INFO | number of running child processes to parent process 10563: 1 [2023-06-20 02:42:24] 2023-06-20 01:41:35,617 | INFO | maximum number of monitored processes: 5 [2023-06-20 02:42:24] 2023-06-20 01:41:38,120 | INFO | monitor loop #229: job 0:5881531671 is in state 'stageout' [2023-06-20 02:42:24] 2023-06-20 01:41:38,163 | INFO | number of running child processes to parent process 10563: 1 [2023-06-20 02:42:24] 2023-06-20 01:41:38,164 | INFO | maximum number of monitored processes: 5 [2023-06-20 02:42:24] 2023-06-20 01:41:40,667 | INFO | monitor loop #230: job 0:5881531671 is in state 'stageout' [2023-06-20 02:42:24] 2023-06-20 01:41:40,710 | INFO | number of running child processes to parent process 10563: 1 [2023-06-20 02:42:24] 2023-06-20 01:41:40,710 | INFO | maximum number of monitored processes: 5 [2023-06-20 02:42:24] 2023-06-20 01:41:43,214 | INFO | monitor loop #231: job 0:5881531671 is in state 'stageout' [2023-06-20 02:42:24] 2023-06-20 01:41:43,257 | INFO | number of running child processes to parent process 10563: 1 [2023-06-20 02:42:24] 2023-06-20 01:41:43,257 | INFO | maximum number of monitored processes: 5 [2023-06-20 02:42:24] 2023-06-20 01:41:45,760 | INFO | monitor loop #232: job 0:5881531671 is in state 'stageout' [2023-06-20 02:42:24] 2023-06-20 01:41:45,762 | INFO | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 778476 B [2023-06-20 02:42:24] 2023-06-20 01:41:45,762 | INFO | payload log (payload.stdout) within allowed size limit (2147483648 B): 9138 B [2023-06-20 02:42:24] 2023-06-20 01:41:45,762 | INFO | executing command: df -mP /home/m/BOINC/slots/3 [2023-06-20 02:42:24] 2023-06-20 01:41:45,778 | INFO | sufficient remaining disk space (424264335360 B) [2023-06-20 02:42:24] 2023-06-20 01:41:45,778 | INFO | work directory size check will use 61362667520 B as a max limit (10% grace limit added) [2023-06-20 02:42:24] 2023-06-20 01:41:45,780 | INFO | size of work directory /home/m/BOINC/slots/3/PanDA_Pilot-5881531671: 1125493 B (within 61362667520 B limit) [2023-06-20 02:42:24] 2023-06-20 01:41:45,780 | INFO | pfn file=/home/m/BOINC/slots/3/PanDA_Pilot-5881531671/output.1.96c95397-daf1-4011-8cb9-a08af3dd0c82_66767.pool.root does not exist (skip from workdir size calculat [2023-06-20 02:42:24] 2023-06-20 01:41:45,780 | INFO | total size of present files: 0 B (workdir size: 1125493 B) [2023-06-20 02:42:24] 2023-06-20 01:41:45,780 | INFO | output file size check: skipping output file /home/m/BOINC/slots/3/PanDA_Pilot-5881531671/output.1.96c95397-daf1-4011-8cb9-a08af3dd0c82_66767.pool.root since it do [2023-06-20 02:42:24] 2023-06-20 01:41:45,822 | INFO | number of running child processes to parent process 10563: 1 [2023-06-20 02:42:24] 2023-06-20 01:41:45,822 | INFO | maximum number of monitored processes: 5 [2023-06-20 02:42:24] 2023-06-20 01:41:48,325 | INFO | monitor loop #233: job 0:5881531671 is in state 'stageout' [2023-06-20 02:42:24] 2023-06-20 01:41:48,368 | INFO | number of running child processes to parent process 10563: 1 [2023-06-20 02:42:24] 2023-06-20 01:41:48,368 | INFO | maximum number of monitored processes: 5 [2023-06-20 02:42:24] 2023-06-20 01:41:49,901 | INFO | [attempt=3/3] loading data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json [2023-06-20 02:42:24] 2023-06-20 01:41:50,031 | WARNING | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: [2023-06-20 02:42:24] 2023-06-20 01:41:50,032 | WARNING | cache file=/home/m/BOINC/slots/3/agis_ddmendpoints.agis.ALL.json is not available: [Errno 2] No such file or directory: '/home/m/BOINC/slots/3/agis_ddmendpoints.ag [2023-06-20 02:42:24] 2023-06-20 01:41:50,081 | INFO | transferring file 96c95397-daf1-4011-8cb9-a08af3dd0c82_66767.1.job.log.tgz from /home/m/BOINC/slots/3/PanDA_Pilot-5881531671/96c95397-daf1-4011-8cb9-a08af3dd0c82_6 [2023-06-20 02:42:24] 2023-06-20 01:41:50,081 | INFO | executing command: /usr/bin/env mv /home/m/BOINC/slots/3/PanDA_Pilot-5881531671/96c95397-daf1-4011-8cb9-a08af3dd0c82_66767.1.job.log.tgz /home/m/BOINC/slots/3/96c9 [2023-06-20 02:42:24] 2023-06-20 01:41:50,100 | INFO | Adding to output.list: 96c95397-daf1-4011-8cb9-a08af3dd0c82_66767.1.job.log.tgz davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/09/9a/96c95397-daf1- [2023-06-20 02:42:24] 2023-06-20 01:41:50,101 | INFO | executing command: ps aux -q 3340 [2023-06-20 02:42:24] 2023-06-20 01:41:50,127 | INFO | summary of transferred files: [2023-06-20 02:42:24] 2023-06-20 01:41:50,127 | INFO | -- lfn=96c95397-daf1-4011-8cb9-a08af3dd0c82_66767.1.job.log.tgz, status_code=0, status=transferred [2023-06-20 02:42:24] 2023-06-20 01:41:50,128 | INFO | stage-out finished correctly [2023-06-20 02:42:24] 2023-06-20 01:41:50,871 | INFO | monitor loop #234: job 0:5881531671 is in state 'finished' [2023-06-20 02:42:24] 2023-06-20 01:41:50,872 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-06-20 02:42:24] 2023-06-20 01:41:51,901 | INFO | finished stage-out for finished payload, adding job to finished_jobs queue [2023-06-20 02:42:24] 2023-06-20 01:41:52,816 | INFO | job 5881531671 has state=finished [2023-06-20 02:42:24] 2023-06-20 01:41:52,817 | INFO | preparing for final server update for job 5881531671 in state='finished' [2023-06-20 02:42:24] 2023-06-20 01:41:52,817 | INFO | this job has now completed (state=finished) [2023-06-20 02:42:24] 2023-06-20 01:41:52,817 | INFO | pilot will not update the server (heartbeat message will be written to file) [2023-06-20 02:42:24] 2023-06-20 01:41:52,817 | INFO | job 5881531671 has finished - writing final server update [2023-06-20 02:42:24] 2023-06-20 01:41:52,819 | INFO | fitting pss+swap vs Time [2023-06-20 02:42:24] 2023-06-20 01:41:52,819 | INFO | current memory leak: 383.97 B/s (using 10 data points, chi2=0.03) [2023-06-20 02:42:24] 2023-06-20 01:41:52,820 | INFO | total number of processed events: 2 (read) [2023-06-20 02:42:24] 2023-06-20 01:41:52,840 | INFO | executing command: lscpu [2023-06-20 02:42:24] 2023-06-20 01:41:52,861 | INFO | found 2 cores (2 cores per socket, 1 sockets) [2023-06-20 02:42:24] 2023-06-20 01:41:52,862 | INFO | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo [2023-06-20 02:42:24] 2023-06-20 01:41:52,893 | INFO | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup [2023-06-20 02:42:24] 2023-06-20 01:41:53,375 | INFO | monitor loop #235: job 0:5881531671 is in state 'finished' [2023-06-20 02:42:24] 2023-06-20 01:41:53,375 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-06-20 02:42:24] 2023-06-20 01:41:55,878 | INFO | monitor loop #236: job 0:5881531671 is in state 'finished' [2023-06-20 02:42:24] 2023-06-20 01:41:55,878 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-06-20 02:42:24] 2023-06-20 01:41:58,379 | INFO | monitor loop #237: job 0:5881531671 is in state 'finished' [2023-06-20 02:42:24] 2023-06-20 01:41:58,380 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-06-20 02:42:24] 2023-06-20 01:42:00,883 | INFO | monitor loop #238: job 0:5881531671 is in state 'finished' [2023-06-20 02:42:24] 2023-06-20 01:42:00,884 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-06-20 02:42:24] 2023-06-20 01:42:03,387 | INFO | monitor loop #239: job 0:5881531671 is in state 'finished' [2023-06-20 02:42:24] 2023-06-20 01:42:03,387 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-06-20 02:42:24] 2023-06-20 01:42:05,007 | INFO | executing command: python3 /home/m/BOINC/slots/3/pilot3/pilot/scripts/cpu_arch.py --alg gcc [2023-06-20 02:42:24] 2023-06-20 01:42:05,110 | INFO | using path: /home/m/BOINC/slots/3/PanDA_Pilot-5881531671/memory_monitor_summary.json (trf name=prmon) [2023-06-20 02:42:24] 2023-06-20 01:42:05,111 | INFO | extracted standard info from prmon json [2023-06-20 02:42:24] 2023-06-20 01:42:05,111 | INFO | extracted standard memory fields from prmon json [2023-06-20 02:42:24] 2023-06-20 01:42:05,112 | INFO | .............................. [2023-06-20 02:42:24] 2023-06-20 01:42:05,112 | INFO | . Timing measurements: [2023-06-20 02:42:24] 2023-06-20 01:42:05,112 | INFO | . get job = 45 s [2023-06-20 02:42:24] 2023-06-20 01:42:05,112 | INFO | . initial setup = 50 s [2023-06-20 02:42:24] 2023-06-20 01:42:05,112 | INFO | . payload setup = 8 s [2023-06-20 02:42:24] 2023-06-20 01:42:05,112 | INFO | . stage-in = 68 s [2023-06-20 02:42:24] 2023-06-20 01:42:05,112 | INFO | . payload execution = 1010 s [2023-06-20 02:42:24] 2023-06-20 01:42:05,112 | INFO | . stage-out = 378 s [2023-06-20 02:42:24] 2023-06-20 01:42:05,112 | INFO | .............................. [2023-06-20 02:42:24] 2023-06-20 01:42:05,174 | INFO | [2023-06-20 02:42:24] 2023-06-20 01:42:05,174 | INFO | job summary report [2023-06-20 02:42:24] 2023-06-20 01:42:05,174 | INFO | -------------------------------------------------- [2023-06-20 02:42:24] 2023-06-20 01:42:05,175 | INFO | PanDA job id: 5881531671 [2023-06-20 02:42:24] 2023-06-20 01:42:05,175 | INFO | task id: NULL [2023-06-20 02:42:24] 2023-06-20 01:42:05,175 | INFO | errors: (none) [2023-06-20 02:42:24] 2023-06-20 01:42:05,175 | INFO | status: LOG_TRANSFER = DONE [2023-06-20 02:42:24] 2023-06-20 01:42:05,175 | INFO | pilot state: finished [2023-06-20 02:42:24] 2023-06-20 01:42:05,175 | INFO | transexitcode: 0 [2023-06-20 02:42:24] 2023-06-20 01:42:05,175 | INFO | exeerrorcode: 0 [2023-06-20 02:42:24] 2023-06-20 01:42:05,175 | INFO | exeerrordiag: [2023-06-20 02:42:24] 2023-06-20 01:42:05,175 | INFO | exitcode: 0 [2023-06-20 02:42:24] 2023-06-20 01:42:05,175 | INFO | exitmsg: OK [2023-06-20 02:42:24] 2023-06-20 01:42:05,175 | INFO | cpuconsumptiontime: 834 s [2023-06-20 02:42:24] 2023-06-20 01:42:05,176 | INFO | nevents: 2 [2023-06-20 02:42:24] 2023-06-20 01:42:05,176 | INFO | neventsw: 0 [2023-06-20 02:42:24] 2023-06-20 01:42:05,176 | INFO | pid: 10563 [2023-06-20 02:42:24] 2023-06-20 01:42:05,176 | INFO | pgrp: 10563 [2023-06-20 02:42:24] 2023-06-20 01:42:05,176 | INFO | corecount: 4 [2023-06-20 02:42:24] 2023-06-20 01:42:05,176 | INFO | event service: False [2023-06-20 02:42:24] 2023-06-20 01:42:05,176 | INFO | sizes: {0: 2500658, 1: 2500857, 12: 2501003, 22: 2501031, 33: 2501059, 44: 2501087, 54: 2501243, 65: 2501271, 74: 2501359, 75: 2501387, 1022: 2521496, 1401: 253083 [2023-06-20 02:42:24] 2023-06-20 01:42:05,176 | INFO | -------------------------------------------------- [2023-06-20 02:42:24] 2023-06-20 01:42:05,176 | INFO | [2023-06-20 02:42:24] 2023-06-20 01:42:05,176 | INFO | executing command: ls -lF /home/m/BOINC/slots/3 [2023-06-20 02:42:24] 2023-06-20 01:42:05,195 | INFO | queue jobs had 0 job(s) [purged] [2023-06-20 02:42:24] 2023-06-20 01:42:05,195 | INFO | queue payloads had 0 job(s) [purged] [2023-06-20 02:42:24] 2023-06-20 01:42:05,195 | INFO | queue data_in had 0 job(s) [purged] [2023-06-20 02:42:24] 2023-06-20 01:42:05,195 | INFO | queue data_out had 0 job(s) [purged] [2023-06-20 02:42:24] 2023-06-20 01:42:05,195 | INFO | queue current_data_in had 0 job(s) [purged] [2023-06-20 02:42:24] 2023-06-20 01:42:05,195 | INFO | queue validated_jobs had 0 job(s) [purged] [2023-06-20 02:42:24] 2023-06-20 01:42:05,195 | INFO | queue validated_payloads had 0 job(s) [purged] [2023-06-20 02:42:24] 2023-06-20 01:42:05,196 | INFO | queue monitored_payloads had 0 job(s) [purged] [2023-06-20 02:42:24] 2023-06-20 01:42:05,196 | INFO | queue finished_jobs had 0 job(s) [purged] [2023-06-20 02:42:24] 2023-06-20 01:42:05,196 | INFO | queue finished_payloads had 0 job(s) [purged] [2023-06-20 02:42:24] 2023-06-20 01:42:05,196 | INFO | queue finished_data_in had 1 job(s) [purged] [2023-06-20 02:42:24] 2023-06-20 01:42:05,196 | INFO | queue finished_data_out had 0 job(s) [purged] [2023-06-20 02:42:24] 2023-06-20 01:42:05,196 | INFO | queue failed_jobs had 0 job(s) [purged] [2023-06-20 02:42:24] 2023-06-20 01:42:05,196 | INFO | queue failed_payloads had 0 job(s) [purged] [2023-06-20 02:42:24] 2023-06-20 01:42:05,196 | INFO | queue failed_data_in had 0 job(s) [purged] [2023-06-20 02:42:24] 2023-06-20 01:42:05,196 | INFO | queue failed_data_out had 0 job(s) [purged] [2023-06-20 02:42:24] 2023-06-20 01:42:05,196 | INFO | queue completed_jobs had 0 job(s) [purged] [2023-06-20 02:42:24] 2023-06-20 01:42:05,197 | INFO | queue completed_jobids has 1 job(s) [2023-06-20 02:42:24] 2023-06-20 01:42:05,197 | INFO | queue realtimelog_payloads had 0 job(s) [purged] [2023-06-20 02:42:24] 2023-06-20 01:42:05,197 | INFO | queue messages had 0 job(s) [purged] [2023-06-20 02:42:24] 2023-06-20 01:42:05,197 | INFO | job 5881531671 has completed (purged errors) [2023-06-20 02:42:24] 2023-06-20 01:42:05,197 | INFO | overall cleanup function is called [2023-06-20 02:42:24] 2023-06-20 01:42:06,204 | INFO | --- collectZombieJob: --- 10, [10563] [2023-06-20 02:42:24] 2023-06-20 01:42:06,204 | INFO | zombie collector trying to kill pid 10563 [2023-06-20 02:42:24] 2023-06-20 01:42:06,205 | INFO | harmless exception when collecting zombies: [Errno 10] No child processes [2023-06-20 02:42:24] 2023-06-20 01:42:07,210 | INFO | collected zombie processes [2023-06-20 02:42:24] 2023-06-20 01:42:07,210 | INFO | will now attempt to kill all subprocesses of pid=10563 [2023-06-20 02:42:24] 2023-06-20 01:42:07,254 | INFO | process IDs to be killed: [10563] (in reverse order) [2023-06-20 02:42:24] 2023-06-20 01:42:07,289 | WARNING | found no corresponding commands to process id(s) [2023-06-20 02:42:24] 2023-06-20 01:42:07,289 | INFO | Do not look for orphan processes in BOINC jobs [2023-06-20 02:42:24] 2023-06-20 01:42:07,290 | INFO | ready for new job [2023-06-20 02:42:24] 2023-06-20 01:42:07,290 | INFO | pilot has finished with previous job - re-establishing logging [2023-06-20 02:42:24] 2023-06-20 01:42:07,290 | INFO | ***************************************** [2023-06-20 02:42:24] 2023-06-20 01:42:07,290 | INFO | *** PanDA Pilot version 3.6.0 (108) *** [2023-06-20 02:42:24] 2023-06-20 01:42:07,290 | INFO | ***************************************** [2023-06-20 02:42:24] 2023-06-20 01:42:07,290 | INFO | [2023-06-20 02:42:24] 2023-06-20 01:42:07,307 | INFO | architecture information: [2023-06-20 02:42:24] 2023-06-20 01:42:07,308 | INFO | executing command: cat /etc/os-release [2023-06-20 02:42:24] 2023-06-20 01:42:07,324 | INFO | cat /etc/os-release: [2023-06-20 02:42:24] NAME="CentOS Linux" [2023-06-20 02:42:24] VERSION="7 (Core)" [2023-06-20 02:42:24] ID="centos" [2023-06-20 02:42:24] ID_LIKE="rhel fedora" [2023-06-20 02:42:24] VERSION_ID="7" [2023-06-20 02:42:24] PRETTY_NAME="CentOS Linux 7 (Core)" [2023-06-20 02:42:24] ANSI_COLOR="0;31" [2023-06-20 02:42:24] CPE_NAME="cpe:/o:centos:centos:7" [2023-06-20 02:42:24] HOME_URL="https://www.centos.org/" [2023-06-20 02:42:24] BUG_REPORT_URL="https://bugs.centos.org/" [2023-06-20 02:42:24] [2023-06-20 02:42:24] CENTOS_MANTISBT_PROJECT="CentOS-7" [2023-06-20 02:42:24] CENTOS_MANTISBT_PROJECT_VERSION="7" [2023-06-20 02:42:24] REDHAT_SUPPORT_PRODUCT="centos" [2023-06-20 02:42:24] REDHAT_SUPPORT_PRODUCT_VERSION="7" [2023-06-20 02:42:24] [2023-06-20 02:42:24] 2023-06-20 01:42:07,325 | INFO | ***************************************** [2023-06-20 02:42:24] 2023-06-20 01:42:07,827 | INFO | executing command: df -mP /home/m/BOINC/slots/3 [2023-06-20 02:42:24] 2023-06-20 01:42:07,846 | INFO | sufficient remaining disk space (424265383936 B) [2023-06-20 02:42:24] 2023-06-20 01:42:07,846 | WARNING | since timefloor is set to 0, pilot was only allowed to run one job [2023-06-20 02:42:24] 2023-06-20 01:42:07,846 | WARNING | setting graceful_stop since proceed_with_getjob() returned False (pilot will end) [2023-06-20 02:42:24] 2023-06-20 01:42:07,847 | INFO | [job] retrieve thread has finished [2023-06-20 02:42:24] 2023-06-20 01:42:07,847 | WARNING | job:job_monitor:received graceful stop - abort after this iteration [2023-06-20 02:42:24] 2023-06-20 01:42:07,847 | WARNING | data:queue_monitoring:received graceful stop - abort after this iteration [2023-06-20 02:42:24] 2023-06-20 01:42:07,848 | INFO | aborting loop [2023-06-20 02:42:24] 2023-06-20 01:42:07,848 | INFO | [job] job monitor thread has finished [2023-06-20 02:42:24] 2023-06-20 01:42:07,859 | INFO | [payload] control thread has finished [2023-06-20 02:42:24] 2023-06-20 01:42:07,903 | INFO | [data] control thread has finished [2023-06-20 02:42:24] 2023-06-20 01:42:08,214 | WARNING | data:copytool_out:received graceful stop - abort after this iteration [2023-06-20 02:42:24] 2023-06-20 01:42:08,258 | INFO | [payload] failed_post thread has finished [2023-06-20 02:42:24] 2023-06-20 01:42:08,506 | INFO | found 0 job(s) in 20 queues [2023-06-20 02:42:24] 2023-06-20 01:42:08,506 | WARNING | pilot monitor received instruction that args.graceful_stop has been set [2023-06-20 02:42:24] 2023-06-20 01:42:08,506 | WARNING | will wait for a maximum of 300 s for threads to finish [2023-06-20 02:42:24] 2023-06-20 01:42:08,509 | INFO | [data] copytool_in thread has finished [2023-06-20 02:42:24] 2023-06-20 01:42:08,772 | INFO | [job] validate thread has finished [2023-06-20 02:42:24] 2023-06-20 01:42:08,794 | INFO | [payload] validate_post thread has finished [2023-06-20 02:42:24] 2023-06-20 01:42:08,984 | INFO | [job] create_data_payload thread has finished [2023-06-20 02:42:24] 2023-06-20 01:42:09,104 | INFO | [payload] validate_pre thread has finished [2023-06-20 02:42:24] 2023-06-20 01:42:09,154 | INFO | [job] control thread has finished [2023-06-20 02:42:24] 2023-06-20 01:42:09,192 | INFO | [payload] execute_payloads thread has finished [2023-06-20 02:42:24] 2023-06-20 01:42:09,215 | INFO | [data] copytool_out thread has finished [2023-06-20 02:42:24] 2023-06-20 01:42:10,185 | WARNING | job:queue_monitor:received graceful stop - abort after this iteration [2023-06-20 02:42:24] 2023-06-20 01:42:10,185 | INFO | [job] queue monitor thread has finished [2023-06-20 02:42:24] 2023-06-20 01:42:10,849 | INFO | [data] queue_monitor thread has finished [2023-06-20 02:42:24] 2023-06-20 01:42:18,403 | INFO | job.realtimelogging is not enabled [2023-06-20 02:42:24] 2023-06-20 01:42:18,403 | INFO | [payload] run_realtimelog thread has finished [2023-06-20 02:42:24] 2023-06-20 01:42:18,931 | INFO | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140665491572544)>', '<ExcThread(monitor, started 140664784275200)>'] [2023-06-20 02:42:24] 2023-06-20 01:42:19,561 | WARNING | job_aborted has been set - aborting pilot monitoring [2023-06-20 02:42:24] 2023-06-20 01:42:19,562 | INFO | [monitor] control thread has ended [2023-06-20 02:42:24] 2023-06-20 01:42:23,957 | INFO | end of generic workflow (traces error code: 0) [2023-06-20 02:42:24] 2023-06-20 01:42:23,957 | INFO | traces error code: 0 [2023-06-20 02:42:24] 2023-06-20 01:42:23,957 | INFO | pilot has finished (exit code=0, shell exit code=0) [2023-06-20 02:42:24] 2023-06-20 01:42:24,010 [wrapper] ==== pilot stdout END ==== [2023-06-20 02:42:24] 2023-06-20 01:42:24,015 [wrapper] ==== wrapper stdout RESUME ==== [2023-06-20 02:42:24] 2023-06-20 01:42:24,020 [wrapper] pilotpid: 3340 [2023-06-20 02:42:24] 2023-06-20 01:42:24,024 [wrapper] Pilot exit status: 0 [2023-06-20 02:42:24] 2023-06-20 01:42:24,034 [wrapper] pandaids: 5881531671 [2023-06-20 02:42:24] 2023-06-20 01:42:24,042 [wrapper] apfmon messages muted [2023-06-20 02:42:24] 2023-06-20 01:42:24,046 [wrapper] Test setup, not cleaning [2023-06-20 02:42:24] 2023-06-20 01:42:24,049 [wrapper] ==== wrapper stdout END ==== [2023-06-20 02:42:24] 2023-06-20 01:42:24,053 [wrapper] ==== wrapper stderr END ==== [2023-06-20 02:42:24] 2023-06-20 01:42:24,061 [wrapper] wrapperexiting ec=0, duration=1624 [2023-06-20 02:42:24] 2023-06-20 01:42:24,066 [wrapper] apfmon messages muted [2023-06-20 02:42:24] *** Error codes and diagnostics *** [2023-06-20 02:42:24] "exeErrorCode": 0, [2023-06-20 02:42:24] "exeErrorDiag": "", [2023-06-20 02:42:24] "pilotErrorCode": 0, [2023-06-20 02:42:24] "pilotErrorDiag": "", [2023-06-20 02:42:24] *** Listing of results directory *** [2023-06-20 02:42:24] total 44928 [2023-06-20 02:42:24] -rw-r--r-- 1 m m 410584 Jun 20 01:39 pilot3.tar.gz [2023-06-20 02:42:24] -rwx------ 1 m m 27012 Jun 20 02:13 runpilot2-wrapper.sh [2023-06-20 02:42:24] -rw-r--r-- 1 m m 4388 Jun 20 02:13 queuedata.json [2023-06-20 02:42:24] -rw-rw-r-- 1 m m 107 Jun 20 02:15 wrapper_26015_x86_64-pc-linux-gnu [2023-06-20 02:42:24] -rwxr-xr-x 1 m m 7986 Jun 20 02:15 run_atlas [2023-06-20 02:42:24] -rw-rw-r-- 1 m m 112 Jun 20 02:15 job.xml [2023-06-20 02:42:24] -rw-r--r-- 2 m m 17604 Jun 20 02:15 start_atlas.sh [2023-06-20 02:42:24] drwxrwx--x 2 m m 4096 Jun 20 02:15 shared [2023-06-20 02:42:24] -rw-r--r-- 2 m m 421966 Jun 20 02:15 input.tar.gz [2023-06-20 02:42:24] -rw-rw-r-- 1 m m 5728 Jun 20 02:15 init_data.xml [2023-06-20 02:42:24] -rw-r--r-- 2 m m 37658468 Jun 20 02:15 EVNT.04972714._000029.pool.root.1 [2023-06-20 02:42:24] -rw-rw-r-- 1 m m 0 Jun 20 02:15 boinc_lockfile [2023-06-20 02:42:24] -rw-rw-r-- 1 m m 2753 Jun 20 02:15 pandaJob.out [2023-06-20 02:42:24] -rw------- 1 m m 424 Jun 20 02:15 setup.sh.local [2023-06-20 02:42:24] -rw------- 1 m m 1017076 Jun 20 02:15 agis_schedconf.cvmfs.json [2023-06-20 02:42:24] -rw------- 1 m m 1399895 Jun 20 02:16 cric_ddmendpoints.json [2023-06-20 02:42:24] drwx------ 4 m m 4096 Jun 20 02:17 pilot3 [2023-06-20 02:42:24] -rw------- 1 m m 2054597 Jun 20 02:35 output.1.96c95397-daf1-4011-8cb9-a08af3dd0c82_66767.pool.root [2023-06-20 02:42:24] -rw------- 1 m m 1018 Jun 20 02:35 memory_monitor_summary.json [2023-06-20 02:42:24] -rw-rw-r-- 1 m m 533 Jun 20 02:35 boinc_task_state.xml [2023-06-20 02:42:24] -rw------- 1 m m 162923 Jun 20 02:38 96c95397-daf1-4011-8cb9-a08af3dd0c82_66767.1.job.log.tgz [2023-06-20 02:42:24] -rw------- 1 m m 6674 Jun 20 02:42 heartbeat.json [2023-06-20 02:42:24] -rw-rw-r-- 1 m m 8192 Jun 20 02:42 boinc_mmap_file [2023-06-20 02:42:24] -rw-rw-r-- 1 m m 25 Jun 20 02:42 wrapper_checkpoint.txt [2023-06-20 02:42:24] -rw------- 1 m m 3985 Jun 20 02:42 pilotlog.txt [2023-06-20 02:42:24] -rw------- 1 m m 223209 Jun 20 02:42 96c95397-daf1-4011-8cb9-a08af3dd0c82_66767.1.job.log [2023-06-20 02:42:24] -rw------- 1 m m 464 Jun 20 02:42 output.list [2023-06-20 02:42:24] -rw-rw-r-- 1 m m 748 Jun 20 02:42 runtime_log [2023-06-20 02:42:24] -rw------- 1 m m 2457600 Jun 20 02:42 result.tar.gz [2023-06-20 02:42:24] -rw-rw-r-- 1 m m 11905 Jun 20 02:42 runtime_log.err [2023-06-20 02:42:24] -rw------- 1 m m 627 Jun 20 02:42 4jmKDmN7eV3n7Olcko1bjSoqABFKDmABFKDm7AsVDmbnLKDm7HTJwm.diag [2023-06-20 02:42:24] -rw-rw-r-- 1 m m 22910 Jun 20 02:42 stderr.txt [2023-06-20 02:42:24] HITS file was successfully produced: [2023-06-20 02:42:24] -rw------- 1 m m 2054597 Jun 20 02:35 shared/HITS.pool.root.1 [2023-06-20 02:42:24] *** Contents of shared directory: *** [2023-06-20 02:42:24] total 41620 [2023-06-20 02:42:24] -rw-r--r-- 2 m m 17604 Jun 20 02:15 start_atlas.sh [2023-06-20 02:42:24] -rw-r--r-- 2 m m 421966 Jun 20 02:15 input.tar.gz [2023-06-20 02:42:24] -rw-r--r-- 2 m m 37658468 Jun 20 02:15 ATLAS.root_0 [2023-06-20 02:42:24] -rw------- 1 m m 2054597 Jun 20 02:35 HITS.pool.root.1 [2023-06-20 02:42:24] -rw------- 1 m m 2457600 Jun 20 02:42 result.tar.gz 02:42:26 (31866): run_atlas exited; CPU time 819.100756 02:42:26 (31866): called boinc_finish(0) </stderr_txt> ]]>
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