Name | oLVLDmLHgV3n7Olcko1bjSoqABFKDmABFKDm7AsVDmtnLKDmPr0gxn_0 |
Workunit | 2313437 |
Created | 20 Jun 2023, 2:28:10 UTC |
Sent | 20 Jun 2023, 2:35:29 UTC |
Report deadline | 27 Jun 2023, 2:35:29 UTC |
Received | 20 Jun 2023, 3:03:36 UTC |
Server state | Over |
Outcome | Success |
Client state | Done |
Exit status | 0 (0x00000000) |
Computer ID | 1498 |
Run time | 25 min 39 sec |
CPU time | 11 min 51 sec |
Validate state | Valid |
Credit | 18.77 |
Device peak FLOPS | 13.02 GFLOPS |
Application version | ATLAS Simulation v3.01 (native_mt) x86_64-pc-linux-gnu |
Peak working set size | 1.51 GB |
Peak swap size | 2.12 GB |
Peak disk usage | 84.00 MB |
<core_client_version>7.4.25</core_client_version> <![CDATA[ <stderr_txt> 03:36:45 (20573): wrapper (7.7.26015): starting 03:36:45 (20573): wrapper: running run_atlas (--nthreads 4) [2023-06-20 03:36:45] Arguments: --nthreads 4 [2023-06-20 03:36:45] Threads: 4 [2023-06-20 03:36:45] Checking for CVMFS [2023-06-20 03:36:47] Probing /cvmfs/atlas.cern.ch... OK [2023-06-20 03:36:49] Probing /cvmfs/atlas-condb.cern.ch... OK [2023-06-20 03:36:49] Running cvmfs_config stat atlas.cern.ch [2023-06-20 03:36:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE [2023-06-20 03:36:49] 2.9.0.0 20716 0 24880 120348 3 1 2623219 4194304 0 130560 0 0 100.000 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.100.152:3128 1 [2023-06-20 03:36:49] CVMFS is ok [2023-06-20 03:36:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 [2023-06-20 03:36:49] Checking for apptainer binary... [2023-06-20 03:36:49] Using apptainer found in PATH at /usr/bin/apptainer [2023-06-20 03:36:49] Running /usr/bin/apptainer --version [2023-06-20 03:36:49] apptainer version 1.0.3 [2023-06-20 03:36:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname [2023-06-20 03:36:49] TeeC16 [2023-06-20 03:36:49] apptainer works [2023-06-20 03:36:49] Set ATHENA_PROC_NUMBER=4 [2023-06-20 03:36:49] Set ATHENA_CORE_NUMBER=4 [2023-06-20 03:36:49] Starting ATLAS job with PandaID=5881581257 [2023-06-20 03:36:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/m/BOINC/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh [2023-06-20 04:02:21] *** The last 200 lines of the pilot log: *** [2023-06-20 04:02:21] 2023-06-20 03:02:03,107 | DEBUG | pilot.user.atlas.utilities | get_cpu_arch | ec=2, stdout=************************************************************************ [2023-06-20 04:02:21] Requested: cpu_flags ... [2023-06-20 04:02:21] Setting up [4mcpuflags 0.1.0[0m ... [2023-06-20 04:02:21] >>>>>>>>>>>>>>>>>>>>>>>>> Information for user <<<<<<<<<<<<<<<<<<<<<<<<< [2023-06-20 04:02:21] ************************************************************************, stderr=usage: cpu_arch.py [-h] [--logpath LOGPATH] [--alg {x86,x86naive}] [-d] [2023-06-20 04:02:21] cpu_arch.py: error: argument --alg: invalid choice: 'gcc' (choose from 'x86', 'x86naive') [2023-06-20 04:02:21] [2023-06-20 04:02:21] 2023-06-20 03:02:03,107 | INFO | pilot.util.workernode | get_cpu_arch | no CPU architecture reporting [2023-06-20 04:02:21] 2023-06-20 03:02:03,107 | INFO | pilot.user.atlas.utilities | get_memory_values | using path: /home/m/BOINC/slots/3/PanDA_Pilot-5881581257/memory_monitor_summary.json (trf name=prmon [2023-06-20 04:02:21] 2023-06-20 03:02:03,108 | DEBUG | pilot.user.atlas.utilities | get_memory_monitor_info | summary_dictionary={'Avg': {'nprocs': 5.0, 'nthreads': 5.933, 'pss': 1316622.0, 'rchar': 68383407.0, [2023-06-20 04:02:21] 2023-06-20 03:02:03,108 | INFO | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard info from prmon json [2023-06-20 04:02:21] 2023-06-20 03:02:03,108 | INFO | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard memory fields from prmon json [2023-06-20 04:02:21] 2023-06-20 03:02:03,108 | INFO | pilot.util.timing | timing_report | .............................. [2023-06-20 04:02:21] 2023-06-20 03:02:03,108 | INFO | pilot.util.timing | timing_report | . Timing measurements: [2023-06-20 04:02:21] 2023-06-20 03:02:03,108 | INFO | pilot.util.timing | timing_report | . get job = 39 s [2023-06-20 04:02:21] 2023-06-20 03:02:03,108 | INFO | pilot.util.timing | timing_report | . initial setup = 43 s [2023-06-20 04:02:21] 2023-06-20 03:02:03,109 | INFO | pilot.util.timing | timing_report | . payload setup = 44 s [2023-06-20 04:02:21] 2023-06-20 03:02:03,109 | INFO | pilot.util.timing | timing_report | . stage-in = 84 s [2023-06-20 04:02:21] 2023-06-20 03:02:03,109 | INFO | pilot.util.timing | timing_report | . payload execution = 900 s [2023-06-20 04:02:21] 2023-06-20 03:02:03,109 | INFO | pilot.util.timing | timing_report | . stage-out = 354 s [2023-06-20 04:02:21] 2023-06-20 03:02:03,109 | INFO | pilot.util.timing | timing_report | .............................. [2023-06-20 04:02:21] 2023-06-20 03:02:03,109 | DEBUG | pilot.control.job | send_state | data={'jobId': '5881581257', 'state': 'finished', 'timestamp': '2023-06-20T04:01:51+00:00', 'siteNam [2023-06-20 04:02:21] 2023-06-20 03:02:03,109 | DEBUG | pilot.control.job | write_heartbeat_to_file | heartbeat dictionary: {'jobId': '5881581257', 'state': 'finished', 'timestamp': '2023-06-20T04:01:51 [2023-06-20 04:02:21] 2023-06-20 03:02:03,109 | DEBUG | pilot.control.job | write_heartbeat_to_file | wrote heartbeat to file: /home/m/BOINC/slots/3/heartbeat.json [2023-06-20 04:02:21] 2023-06-20 03:02:03,110 | DEBUG | pilot.control.job | queue_monitor | job.completed=False [2023-06-20 04:02:21] 2023-06-20 03:02:03,169 | INFO | pilot.control.job | make_job_report | [2023-06-20 04:02:21] 2023-06-20 03:02:03,169 | INFO | pilot.control.job | make_job_report | job summary report [2023-06-20 04:02:21] 2023-06-20 03:02:03,169 | INFO | pilot.control.job | make_job_report | -------------------------------------------------- [2023-06-20 04:02:21] 2023-06-20 03:02:03,169 | INFO | pilot.control.job | make_job_report | PanDA job id: 5881581257 [2023-06-20 04:02:21] 2023-06-20 03:02:03,169 | INFO | pilot.control.job | make_job_report | task id: NULL [2023-06-20 04:02:21] 2023-06-20 03:02:03,169 | INFO | pilot.control.job | make_job_report | errors: (none) [2023-06-20 04:02:21] 2023-06-20 03:02:03,170 | INFO | pilot.control.job | make_job_report | status: LOG_TRANSFER = DONE [2023-06-20 04:02:21] 2023-06-20 03:02:03,170 | INFO | pilot.control.job | make_job_report | pilot state: finished [2023-06-20 04:02:21] 2023-06-20 03:02:03,170 | INFO | pilot.control.job | make_job_report | transexitcode: 0 [2023-06-20 04:02:21] 2023-06-20 03:02:03,170 | INFO | pilot.control.job | make_job_report | exeerrorcode: 0 [2023-06-20 04:02:21] 2023-06-20 03:02:03,170 | INFO | pilot.control.job | make_job_report | exeerrordiag: [2023-06-20 04:02:21] 2023-06-20 03:02:03,170 | INFO | pilot.control.job | make_job_report | exitcode: 0 [2023-06-20 04:02:21] 2023-06-20 03:02:03,170 | INFO | pilot.control.job | make_job_report | exitmsg: OK [2023-06-20 04:02:21] 2023-06-20 03:02:03,170 | INFO | pilot.control.job | make_job_report | cpuconsumptiontime: 724 s [2023-06-20 04:02:21] 2023-06-20 03:02:03,170 | INFO | pilot.control.job | make_job_report | nevents: 2 [2023-06-20 04:02:21] 2023-06-20 03:02:03,170 | INFO | pilot.control.job | make_job_report | neventsw: 0 [2023-06-20 04:02:21] 2023-06-20 03:02:03,170 | INFO | pilot.control.job | make_job_report | pid: 31385 [2023-06-20 04:02:21] 2023-06-20 03:02:03,171 | INFO | pilot.control.job | make_job_report | pgrp: 31385 [2023-06-20 04:02:21] 2023-06-20 03:02:03,171 | INFO | pilot.control.job | make_job_report | corecount: 4 [2023-06-20 04:02:21] 2023-06-20 03:02:03,171 | INFO | pilot.control.job | make_job_report | event service: False [2023-06-20 04:02:21] 2023-06-20 03:02:03,171 | INFO | pilot.control.job | make_job_report | sizes: {0: 2500187, 1: 2501122, 11: 2501268, 22: 2501296, 33: 2501324, 43: 2501352, 54: 2501508, 65: [2023-06-20 04:02:21] 2023-06-20 03:02:03,171 | INFO | pilot.control.job | make_job_report | -------------------------------------------------- [2023-06-20 04:02:21] 2023-06-20 03:02:03,171 | INFO | pilot.control.job | make_job_report | [2023-06-20 04:02:21] 2023-06-20 03:02:03,171 | DEBUG | pilot.control.job | has_job_completed | ls -lF /home/m/BOINC/slots/3: [2023-06-20 04:02:21] [2023-06-20 04:02:21] 2023-06-20 03:02:03,171 | INFO | pilot.util.container | print_executable | executing command: ls -lF /home/m/BOINC/slots/3 [2023-06-20 04:02:21] 2023-06-20 03:02:03,191 | DEBUG | pilot.control.job | has_job_completed | total 44852 [2023-06-20 04:02:21] -rw-r--r-- 2 m m 39611081 Jun 20 03:36 EVNT.04972714._000022.pool.root.1 [2023-06-20 04:02:21] drwxrwx--- 2 m m 4096 Jun 20 04:01 PanDA_Pilot-5881581257/ [2023-06-20 04:02:21] -rw------- 1 m m 1017084 Jun 20 03:37 agis_schedconf.cvmfs.json [2023-06-20 04:02:21] -rw------- 1 m m 577855 Jun 20 04:02 be88c164-3886-4a2a-9b24-dbb4ea7db5ed_35851.1.job.log [2023-06-20 04:02:21] -rw------- 1 m m 180472 Jun 20 03:59 be88c164-3886-4a2a-9b24-dbb4ea7db5ed_35851.1.job.log.tgz [2023-06-20 04:02:21] -rw-rw-r-- 1 m m 0 Jun 20 03:36 boinc_lockfile [2023-06-20 04:02:21] -rw-rw-r-- 1 m m 8192 Jun 20 04:01 boinc_mmap_file [2023-06-20 04:02:21] -rw-rw-r-- 1 m m 533 Jun 20 03:56 boinc_task_state.xml [2023-06-20 04:02:21] -rw------- 1 m m 1399895 Jun 20 03:37 cric_ddmendpoints.json [2023-06-20 04:02:21] -rw------- 1 m m 7349 Jun 20 04:02 heartbeat.json [2023-06-20 04:02:21] -rw-rw-r-- 1 m m 5728 Jun 20 03:36 init_data.xml [2023-06-20 04:02:21] -rw-r--r-- 2 m m 427191 Jun 20 03:36 input.tar.gz [2023-06-20 04:02:21] -rw-rw-r-- 1 m m 112 Jun 20 03:36 job.xml [2023-06-20 04:02:21] -rw------- 1 m m 1016 Jun 20 03:55 memory_monitor_summary.json [2023-06-20 04:02:21] -rw------- 1 m m 129 Jun 20 03:36 oLVLDmLHgV3n7Olcko1bjSoqABFKDmABFKDm7AsVDmtnLKDmPr0gxn.diag [2023-06-20 04:02:21] -rw------- 1 m m 1549093 Jun 20 03:55 output.1.be88c164-3886-4a2a-9b24-dbb4ea7db5ed_35851.pool.root [2023-06-20 04:02:21] -rw------- 1 m m 464 Jun 20 04:01 output.list [2023-06-20 04:02:21] -rw-rw-r-- 1 m m 2666 Jun 20 03:36 pandaJob.out [2023-06-20 04:02:21] drwx------ 4 m m 4096 Jun 20 03:38 pilot3/ [2023-06-20 04:02:21] -rw------- 1 m m 415467 Jun 20 03:28 pilot3.tar.gz [2023-06-20 04:02:21] -rw------- 1 m m 564163 Jun 20 04:02 pilotlog.txt [2023-06-20 04:02:21] -rw-r--r-- 1 m m 4388 Jun 20 03:27 queuedata.json [2023-06-20 04:02:21] -rwxr-xr-x 1 m m 7986 Jun 20 03:36 run_atlas* [2023-06-20 04:02:21] -rwx------ 1 m m 27010 Jun 20 03:28 runpilot2-wrapper.sh* [2023-06-20 04:02:21] -rw-rw-r-- 1 m m 407 Jun 20 03:36 runtime_log [2023-06-20 04:02:21] -rw-rw-r-- 1 m m 7699 Jun 20 03:36 runtime_log.err [2023-06-20 04:02:21] -rw------- 1 m m 424 Jun 20 03:36 setup.sh.local [2023-06-20 04:02:21] drwxrwx--x 2 m m 4096 Jun 20 03:36 shared/ [2023-06-20 04:02:21] -rw-r--r-- 2 m m 17632 Jun 20 03:36 start_atlas.sh [2023-06-20 04:02:21] -rw-rw-r-- 1 m m 1716 Jun 20 03:36 stderr.txt [2023-06-20 04:02:21] -rw-rw-r-- 1 m m 107 Jun 20 03:36 wrapper_26015_x86_64-pc-linux-gnu [2023-06-20 04:02:21] -rw-rw-r-- 1 m m 25 Jun 20 04:01 wrapper_checkpoint.txt [2023-06-20 04:02:21] 2023-06-20 03:02:03,191 | INFO | pilot.util.queuehandling | queue_report | queue jobs had 0 job(s) [purged] [2023-06-20 04:02:21] 2023-06-20 03:02:03,191 | INFO | pilot.util.queuehandling | queue_report | queue payloads had 0 job(s) [purged] [2023-06-20 04:02:21] 2023-06-20 03:02:03,191 | INFO | pilot.util.queuehandling | queue_report | queue data_in had 0 job(s) [purged] [2023-06-20 04:02:21] 2023-06-20 03:02:03,191 | INFO | pilot.util.queuehandling | queue_report | queue data_out had 0 job(s) [purged] [2023-06-20 04:02:21] 2023-06-20 03:02:03,192 | INFO | pilot.util.queuehandling | queue_report | queue current_data_in had 0 job(s) [purged] [2023-06-20 04:02:21] 2023-06-20 03:02:03,192 | INFO | pilot.util.queuehandling | queue_report | queue validated_jobs had 0 job(s) [purged] [2023-06-20 04:02:21] 2023-06-20 03:02:03,192 | INFO | pilot.util.queuehandling | queue_report | queue validated_payloads had 0 job(s) [purged] [2023-06-20 04:02:21] 2023-06-20 03:02:03,192 | INFO | pilot.util.queuehandling | queue_report | queue monitored_payloads had 0 job(s) [purged] [2023-06-20 04:02:21] 2023-06-20 03:02:03,192 | INFO | pilot.util.queuehandling | queue_report | queue finished_jobs had 0 job(s) [purged] [2023-06-20 04:02:21] 2023-06-20 03:02:03,192 | INFO | pilot.util.queuehandling | queue_report | queue finished_payloads had 0 job(s) [purged] [2023-06-20 04:02:21] 2023-06-20 03:02:03,192 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_in had 1 job(s) [purged] [2023-06-20 04:02:21] 2023-06-20 03:02:03,192 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_out had 0 job(s) [purged] [2023-06-20 04:02:21] 2023-06-20 03:02:03,193 | INFO | pilot.util.queuehandling | queue_report | queue failed_jobs had 0 job(s) [purged] [2023-06-20 04:02:21] 2023-06-20 03:02:03,193 | INFO | pilot.util.queuehandling | queue_report | queue failed_payloads had 0 job(s) [purged] [2023-06-20 04:02:21] 2023-06-20 03:02:03,193 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_in had 0 job(s) [purged] [2023-06-20 04:02:21] 2023-06-20 03:02:03,193 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_out had 0 job(s) [purged] [2023-06-20 04:02:21] 2023-06-20 03:02:03,193 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobs had 0 job(s) [purged] [2023-06-20 04:02:21] 2023-06-20 03:02:03,193 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobids has 1 job(s) [2023-06-20 04:02:21] 2023-06-20 03:02:03,193 | INFO | pilot.util.queuehandling | queue_report | queue realtimelog_payloads had 0 job(s) [purged] [2023-06-20 04:02:21] 2023-06-20 03:02:03,193 | INFO | pilot.util.queuehandling | queue_report | queue messages had 0 job(s) [purged] [2023-06-20 04:02:21] 2023-06-20 03:02:03,194 | INFO | pilot.control.job | has_job_completed | job 5881581257 has completed (purged errors) [2023-06-20 04:02:21] 2023-06-20 03:02:03,194 | DEBUG | pilot.util.realtimelogger | cleanup | attempting real-time logger cleanup [2023-06-20 04:02:21] 2023-06-20 03:02:03,194 | INFO | pilot.util.processes | cleanup | overall cleanup function is called [2023-06-20 04:02:21] 2023-06-20 03:02:03,196 | DEBUG | pilot.util.processes | cleanup | work directory was removed: /home/m/BOINC/slots/3/PanDA_Pilot-5881581257 [2023-06-20 04:02:21] 2023-06-20 03:02:04,201 | INFO | pilot.info.jobdata | collect_zombies | --- collectZombieJob: --- 10, [31385] [2023-06-20 04:02:21] 2023-06-20 03:02:04,201 | INFO | pilot.info.jobdata | collect_zombies | zombie collector trying to kill pid 31385 [2023-06-20 04:02:21] 2023-06-20 03:02:04,202 | INFO | pilot.info.jobdata | collect_zombies | harmless exception when collecting zombies: [Errno 10] No child processes [2023-06-20 04:02:21] 2023-06-20 03:02:05,207 | INFO | pilot.util.processes | cleanup | collected zombie processes [2023-06-20 04:02:21] 2023-06-20 03:02:05,207 | INFO | pilot.util.processes | cleanup | will now attempt to kill all subprocesses of pid=31385 [2023-06-20 04:02:21] 2023-06-20 03:02:05,250 | INFO | pilot.util.processes | kill_processes | process IDs to be killed: [31385] (in reverse order) [2023-06-20 04:02:21] 2023-06-20 03:02:05,287 | WARNING | pilot.util.processes | kill_processes | found no corresponding commands to process id(s) [2023-06-20 04:02:21] 2023-06-20 03:02:05,287 | INFO | pilot.util.processes | kill_orphans | Do not look for orphan processes in BOINC jobs [2023-06-20 04:02:21] 2023-06-20 03:02:05,288 | DEBUG | pilot.util.queuehandling | purge_queue | queue purged [2023-06-20 04:02:21] 2023-06-20 03:02:05,288 | INFO | pilot.control.job | retrieve | ready for new job [2023-06-20 04:02:21] 2023-06-20 03:02:05,288 | INFO | root | retrieve | pilot has finished with previous job - re-establishing logging [2023-06-20 04:02:21] 2023-06-20 03:02:05,288 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************** [2023-06-20 04:02:21] 2023-06-20 03:02:05,289 | INFO | pilot.util.auxiliary | pilot_version_banner | *** PanDA Pilot version 3.6.1 (21) *** [2023-06-20 04:02:21] 2023-06-20 03:02:05,289 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************** [2023-06-20 04:02:21] 2023-06-20 03:02:05,289 | INFO | pilot.util.auxiliary | pilot_version_banner | [2023-06-20 04:02:21] 2023-06-20 03:02:05,307 | INFO | pilot.util.auxiliary | display_architecture_info | architecture information: [2023-06-20 04:02:21] 2023-06-20 03:02:05,308 | INFO | pilot.util.container | print_executable | executing command: cat /etc/os-release [2023-06-20 04:02:21] 2023-06-20 03:02:05,325 | INFO | pilot.util.filehandling | dump | cat /etc/os-release: [2023-06-20 04:02:21] NAME="CentOS Linux" [2023-06-20 04:02:21] VERSION="7 (Core)" [2023-06-20 04:02:21] ID="centos" [2023-06-20 04:02:21] ID_LIKE="rhel fedora" [2023-06-20 04:02:21] VERSION_ID="7" [2023-06-20 04:02:21] PRETTY_NAME="CentOS Linux 7 (Core)" [2023-06-20 04:02:21] ANSI_COLOR="0;31" [2023-06-20 04:02:21] CPE_NAME="cpe:/o:centos:centos:7" [2023-06-20 04:02:21] HOME_URL="https://www.centos.org/" [2023-06-20 04:02:21] BUG_REPORT_URL="https://bugs.centos.org/" [2023-06-20 04:02:21] [2023-06-20 04:02:21] CENTOS_MANTISBT_PROJECT="CentOS-7" [2023-06-20 04:02:21] CENTOS_MANTISBT_PROJECT_VERSION="7" [2023-06-20 04:02:21] REDHAT_SUPPORT_PRODUCT="centos" [2023-06-20 04:02:21] REDHAT_SUPPORT_PRODUCT_VERSION="7" [2023-06-20 04:02:21] [2023-06-20 04:02:21] 2023-06-20 03:02:05,326 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************** [2023-06-20 04:02:21] 2023-06-20 03:02:05,829 | DEBUG | pilot.util.monitoring | check_local_space | checking local space on /home/m/BOINC/slots/3 [2023-06-20 04:02:21] 2023-06-20 03:02:05,829 | INFO | pilot.util.container | print_executable | executing command: df -mP /home/m/BOINC/slots/3 [2023-06-20 04:02:21] 2023-06-20 03:02:05,848 | DEBUG | pilot.util.workernode | get_local_disk_space | stdout=Filesystem 1048576-blocks Used Available Capacity Mounted on [2023-06-20 04:02:21] /dev/sda1 455417 27878 404383 7% /home/m/BOINC/slots/3 [2023-06-20 04:02:21] 2023-06-20 03:02:05,848 | DEBUG | pilot.util.workernode | get_local_disk_space | stderr= [2023-06-20 04:02:21] 2023-06-20 03:02:05,848 | INFO | pilot.util.monitoring | check_local_space | sufficient remaining disk space (424026308608 B) [2023-06-20 04:02:21] 2023-06-20 03:02:05,849 | WARNING | pilot.control.job | proceed_with_getjob | since timefloor is set to 0, pilot was only allowed to run one job [2023-06-20 04:02:21] 2023-06-20 03:02:05,849 | WARNING | pilot.control.job | retrieve | setting graceful_stop since proceed_with_getjob() returned False (pilot will end) [2023-06-20 04:02:21] 2023-06-20 03:02:05,849 | INFO | pilot.control.job | retrieve | [job] retrieve thread has finished [2023-06-20 04:02:21] 2023-06-20 03:02:05,849 | WARNING | pilot.util.common | should_abort | data:copytool_out:received graceful stop - abort after this iteration [2023-06-20 04:02:21] 2023-06-20 03:02:05,851 | DEBUG | pilot.control.payload | control | payload control ending since graceful_stop has been set [2023-06-20 04:02:21] 2023-06-20 03:02:05,851 | INFO | pilot.control.payload | control | [payload] control thread has finished [2023-06-20 04:02:21] 2023-06-20 03:02:05,943 | WARNING | pilot.util.common | should_abort | job:job_monitor:received graceful stop - abort after this iteration [2023-06-20 04:02:21] 2023-06-20 03:02:05,943 | INFO | pilot.control.job | job_monitor | aborting loop [2023-06-20 04:02:21] 2023-06-20 03:02:05,943 | INFO | pilot.control.job | job_monitor | [job] job monitor thread has finished [2023-06-20 04:02:21] 2023-06-20 03:02:05,969 | INFO | pilot.control.payload | execute_payloads | [payload] execute_payloads thread has finished [2023-06-20 04:02:21] 2023-06-20 03:02:06,446 | DEBUG | pilot.control.job | control | job control ending since graceful_stop has been set [2023-06-20 04:02:21] 2023-06-20 03:02:06,446 | INFO | pilot.control.job | control | [job] control thread has finished [2023-06-20 04:02:21] 2023-06-20 03:02:06,473 | INFO | pilot.control.job | create_data_payload | [job] create_data_payload thread has finished [2023-06-20 04:02:21] 2023-06-20 03:02:06,481 | DEBUG | pilot.control.data | control | data control ending since graceful_stop has been set [2023-06-20 04:02:21] 2023-06-20 03:02:06,482 | INFO | pilot.control.data | control | [data] control thread has finished [2023-06-20 04:02:21] 2023-06-20 03:02:06,605 | INFO | pilot.control.payload | validate_pre | [payload] validate_pre thread has finished [2023-06-20 04:02:21] 2023-06-20 03:02:06,713 | INFO | pilot.util.queuehandling | abort_jobs_in_queues | found 0 job(s) in 20 queues [2023-06-20 04:02:21] 2023-06-20 03:02:06,714 | WARNING | pilot.control.monitor | run_checks | pilot monitor received instruction that args.graceful_stop has been set [2023-06-20 04:02:21] 2023-06-20 03:02:06,714 | WARNING | pilot.control.monitor | run_checks | will wait for a maximum of 300 s for threads to finish [2023-06-20 04:02:21] 2023-06-20 03:02:06,798 | INFO | pilot.control.payload | validate_post | [payload] validate_post thread has finished [2023-06-20 04:02:21] 2023-06-20 03:02:06,850 | INFO | pilot.control.data | copytool_out | [data] copytool_out thread has finished [2023-06-20 04:02:21] 2023-06-20 03:02:07,179 | INFO | pilot.control.data | copytool_in | [data] copytool_in thread has finished [2023-06-20 04:02:21] 2023-06-20 03:02:07,270 | INFO | pilot.control.payload | failed_post | [payload] failed_post thread has finished [2023-06-20 04:02:21] 2023-06-20 03:02:07,298 | INFO | pilot.control.job | validate | [job] validate thread has finished [2023-06-20 04:02:21] 2023-06-20 03:02:08,179 | WARNING | pilot.util.common | should_abort | job:queue_monitor:received graceful stop - abort after this iteration [2023-06-20 04:02:21] 2023-06-20 03:02:08,180 | INFO | pilot.control.job | queue_monitor | [job] queue monitor thread has finished [2023-06-20 04:02:21] 2023-06-20 03:02:09,128 | WARNING | pilot.util.common | should_abort | data:queue_monitoring:received graceful stop - abort after this iteration [2023-06-20 04:02:21] 2023-06-20 03:02:12,128 | INFO | pilot.control.data | queue_monitoring | [data] queue_monitor thread has finished [2023-06-20 04:02:21] 2023-06-20 03:02:15,972 | INFO | pilot.control.payload | get_logging_info | job.realtimelogging is not enabled [2023-06-20 04:02:21] 2023-06-20 03:02:15,972 | DEBUG | pilot.control.payload | run_realtimelog | real-time logging not needed at this point [2023-06-20 04:02:21] 2023-06-20 03:02:15,972 | DEBUG | pilot.control.payload | run_realtimelog | realtime logger was not found, waiting .. [2023-06-20 04:02:21] 2023-06-20 03:02:15,972 | INFO | pilot.control.payload | run_realtimelog | [payload] run_realtimelog thread has finished [2023-06-20 04:02:21] 2023-06-20 03:02:16,765 | INFO | pilot.util.processes | threads_aborted | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140348 [2023-06-20 04:02:21] 2023-06-20 03:02:16,765 | DEBUG | pilot.workflow.generic | run | will proceed to set job_aborted [2023-06-20 04:02:21] 2023-06-20 03:02:17,769 | WARNING | pilot.control.monitor | run_checks | job_aborted has been set - aborting pilot monitoring [2023-06-20 04:02:21] 2023-06-20 03:02:17,770 | INFO | pilot.control.monitor | control | [monitor] control thread has ended [2023-06-20 04:02:21] 2023-06-20 03:02:21,777 | DEBUG | pilot.workflow.generic | run | all relevant threads have aborted (thread count=1) [2023-06-20 04:02:21] 2023-06-20 03:02:21,777 | INFO | pilot.workflow.generic | run | end of generic workflow (traces error code: 0) [2023-06-20 04:02:21] 2023-06-20 03:02:21,778 | INFO | root | wrap_up | traces error code: 0 [2023-06-20 04:02:21] 2023-06-20 03:02:21,778 | INFO | root | wrap_up | pilot has finished (exit code=0, shell exit code=0) [2023-06-20 04:02:21] 2023-06-20 03:02:21,830 [wrapper] ==== pilot stdout END ==== [2023-06-20 04:02:21] 2023-06-20 03:02:21,834 [wrapper] ==== wrapper stdout RESUME ==== [2023-06-20 04:02:21] 2023-06-20 03:02:21,838 [wrapper] pilotpid: 24169 [2023-06-20 04:02:21] 2023-06-20 03:02:21,843 [wrapper] Pilot exit status: 0 [2023-06-20 04:02:21] 2023-06-20 03:02:21,854 [wrapper] pandaids: 5881581257 [2023-06-20 04:02:21] 2023-06-20 03:02:21,861 [wrapper] apfmon messages muted [2023-06-20 04:02:21] 2023-06-20 03:02:21,865 [wrapper] Test setup, not cleaning [2023-06-20 04:02:21] 2023-06-20 03:02:21,869 [wrapper] ==== wrapper stdout END ==== [2023-06-20 04:02:21] 2023-06-20 03:02:21,874 [wrapper] ==== wrapper stderr END ==== [2023-06-20 04:02:21] 2023-06-20 03:02:21,883 [wrapper] wrapperexiting ec=0, duration=1532 [2023-06-20 04:02:21] 2023-06-20 03:02:21,888 [wrapper] apfmon messages muted [2023-06-20 04:02:21] *** Error codes and diagnostics *** [2023-06-20 04:02:21] "exeErrorCode": 0, [2023-06-20 04:02:21] "exeErrorDiag": "", [2023-06-20 04:02:21] "pilotErrorCode": 0, [2023-06-20 04:02:21] "pilotErrorDiag": "", [2023-06-20 04:02:21] *** Listing of results directory *** [2023-06-20 04:02:21] total 46636 [2023-06-20 04:02:21] -rw-r--r-- 1 m m 4388 Jun 20 03:27 queuedata.json [2023-06-20 04:02:21] -rwx------ 1 m m 27010 Jun 20 03:28 runpilot2-wrapper.sh [2023-06-20 04:02:21] -rw------- 1 m m 415467 Jun 20 03:28 pilot3.tar.gz [2023-06-20 04:02:21] -rw-rw-r-- 1 m m 107 Jun 20 03:36 wrapper_26015_x86_64-pc-linux-gnu [2023-06-20 04:02:21] -rwxr-xr-x 1 m m 7986 Jun 20 03:36 run_atlas [2023-06-20 04:02:21] -rw-rw-r-- 1 m m 112 Jun 20 03:36 job.xml [2023-06-20 04:02:21] -rw-rw-r-- 1 m m 5728 Jun 20 03:36 init_data.xml [2023-06-20 04:02:21] -rw-r--r-- 2 m m 39611081 Jun 20 03:36 EVNT.04972714._000022.pool.root.1 [2023-06-20 04:02:21] -rw-r--r-- 2 m m 17632 Jun 20 03:36 start_atlas.sh [2023-06-20 04:02:21] drwxrwx--x 2 m m 4096 Jun 20 03:36 shared [2023-06-20 04:02:21] -rw-r--r-- 2 m m 427191 Jun 20 03:36 input.tar.gz [2023-06-20 04:02:21] -rw-rw-r-- 1 m m 0 Jun 20 03:36 boinc_lockfile [2023-06-20 04:02:21] -rw-rw-r-- 1 m m 2666 Jun 20 03:36 pandaJob.out [2023-06-20 04:02:21] -rw------- 1 m m 424 Jun 20 03:36 setup.sh.local [2023-06-20 04:02:21] -rw------- 1 m m 1017084 Jun 20 03:37 agis_schedconf.cvmfs.json [2023-06-20 04:02:21] -rw------- 1 m m 1399895 Jun 20 03:37 cric_ddmendpoints.json [2023-06-20 04:02:21] drwx------ 4 m m 4096 Jun 20 03:38 pilot3 [2023-06-20 04:02:21] -rw------- 1 m m 1549093 Jun 20 03:55 output.1.be88c164-3886-4a2a-9b24-dbb4ea7db5ed_35851.pool.root [2023-06-20 04:02:21] -rw------- 1 m m 1016 Jun 20 03:55 memory_monitor_summary.json [2023-06-20 04:02:21] -rw-rw-r-- 1 m m 533 Jun 20 03:56 boinc_task_state.xml [2023-06-20 04:02:21] -rw------- 1 m m 180472 Jun 20 03:59 be88c164-3886-4a2a-9b24-dbb4ea7db5ed_35851.1.job.log.tgz [2023-06-20 04:02:21] -rw------- 1 m m 7349 Jun 20 04:02 heartbeat.json [2023-06-20 04:02:21] -rw-rw-r-- 1 m m 25 Jun 20 04:02 wrapper_checkpoint.txt [2023-06-20 04:02:21] -rw-rw-r-- 1 m m 8192 Jun 20 04:02 boinc_mmap_file [2023-06-20 04:02:21] -rw------- 1 m m 8223 Jun 20 04:02 pilotlog.txt [2023-06-20 04:02:21] -rw------- 1 m m 593809 Jun 20 04:02 be88c164-3886-4a2a-9b24-dbb4ea7db5ed_35851.1.job.log [2023-06-20 04:02:21] -rw------- 1 m m 464 Jun 20 04:02 output.list [2023-06-20 04:02:21] -rw-rw-r-- 1 m m 748 Jun 20 04:02 runtime_log [2023-06-20 04:02:21] -rw------- 1 m m 2344960 Jun 20 04:02 result.tar.gz [2023-06-20 04:02:21] -rw-rw-r-- 1 m m 11913 Jun 20 04:02 runtime_log.err [2023-06-20 04:02:21] -rw------- 1 m m 627 Jun 20 04:02 oLVLDmLHgV3n7Olcko1bjSoqABFKDmABFKDm7AsVDmtnLKDmPr0gxn.diag [2023-06-20 04:02:21] -rw-rw-r-- 1 m m 28657 Jun 20 04:02 stderr.txt [2023-06-20 04:02:22] HITS file was successfully produced: [2023-06-20 04:02:22] -rw------- 1 m m 1549093 Jun 20 03:55 shared/HITS.pool.root.1 [2023-06-20 04:02:22] *** Contents of shared directory: *** [2023-06-20 04:02:22] total 42932 [2023-06-20 04:02:22] -rw-r--r-- 2 m m 39611081 Jun 20 03:36 ATLAS.root_0 [2023-06-20 04:02:22] -rw-r--r-- 2 m m 17632 Jun 20 03:36 start_atlas.sh [2023-06-20 04:02:22] -rw-r--r-- 2 m m 427191 Jun 20 03:36 input.tar.gz [2023-06-20 04:02:22] -rw------- 1 m m 1549093 Jun 20 03:55 HITS.pool.root.1 [2023-06-20 04:02:22] -rw------- 1 m m 2344960 Jun 20 04:02 result.tar.gz 04:02:23 (20573): run_atlas exited; CPU time 711.624230 04:02:23 (20573): called boinc_finish(0) </stderr_txt> ]]>
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