Name 06BODmqZRW3n7Olcko1bjSoqABFKDmABFKDm7AsVDmQwLKDmkawIVn_0
Workunit 2313812
Created 22 Jun 2023, 4:58:20 UTC
Sent 22 Jun 2023, 5:06:47 UTC
Report deadline 29 Jun 2023, 5:06:47 UTC
Received 22 Jun 2023, 5:27:52 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 4721
Run time 16 min 41 sec
CPU time 6 min 18 sec
Validate state Valid
Credit 6.97
Device peak FLOPS 5.90 GFLOPS
Application version ATLAS Simulation v3.01 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 1.58 GB
Peak swap size 2.13 GB
Peak disk usage 81.03 MB

Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:11:00 (81711): wrapper (7.7.26015): starting
07:11:00 (81711): wrapper: running run_atlas (--nthreads 1)
[2023-06-22 07:11:00] Arguments: --nthreads 1
[2023-06-22 07:11:00] Threads: 1
[2023-06-22 07:11:00] Checking for CVMFS
[2023-06-22 07:11:00] Probing /cvmfs/atlas.cern.ch... OK
[2023-06-22 07:11:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2023-06-22 07:11:00] Running cvmfs_config stat atlas.cern.ch
[2023-06-22 07:11:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2023-06-22 07:11:00] 2.10.1.0 59681 18 39432 120429 1 73 2391282 4096001 0 130560 0 87206 99.998 900 883 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://10.116.178.201:3128 1
[2023-06-22 07:11:00] CVMFS is ok
[2023-06-22 07:11:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2023-06-22 07:11:00] Checking for apptainer binary...
[2023-06-22 07:11:00] Using apptainer found in PATH at /usr/bin/apptainer
[2023-06-22 07:11:00] Running /usr/bin/apptainer --version
[2023-06-22 07:11:00] apptainer version 1.1.9-1.el9
[2023-06-22 07:11:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2023-06-22 07:11:01] P620-CentOS9
[2023-06-22 07:11:01] apptainer works
[2023-06-22 07:11:01] Starting ATLAS job with PandaID=5884761360
[2023-06-22 07:11:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2023-06-22 07:27:38]  *** The last 200 lines of the pilot log: ***
[2023-06-22 07:27:38] 2023-06-22 05:26:51,468 | INFO     | maximum number of monitored processes: 5
[2023-06-22 07:27:38] 2023-06-22 05:26:53,971 | INFO     | monitor loop #176: job 0:5884761360 is in state 'stageout'
[2023-06-22 07:27:38] 2023-06-22 05:26:53,994 | INFO     | number of running child processes to parent process 92009: 1
[2023-06-22 07:27:38] 2023-06-22 05:26:53,994 | INFO     | maximum number of monitored processes: 5
[2023-06-22 07:27:38] 2023-06-22 05:26:56,507 | INFO     | monitor loop #177: job 0:5884761360 is in state 'stageout'
[2023-06-22 07:27:38] 2023-06-22 05:26:56,507 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 778352 B
[2023-06-22 07:27:38] 2023-06-22 05:26:56,507 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 8851 B
[2023-06-22 07:27:38] 2023-06-22 05:26:56,507 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2023-06-22 07:27:38] 2023-06-22 05:26:56,513 | INFO     | sufficient remaining disk space (23209181184 B)
[2023-06-22 07:27:38] 2023-06-22 05:26:56,514 | INFO     | work directory size check will use 61362667520 B as a max limit (10% grace limit added)
[2023-06-22 07:27:38] 2023-06-22 05:26:56,514 | INFO     | size of work directory /var/lib/boinc/slots/0/PanDA_Pilot-5884761360: 1109461 B (within 61362667520 B limit)
[2023-06-22 07:27:38] 2023-06-22 05:26:56,514 | INFO     | pfn file=/var/lib/boinc/slots/0/PanDA_Pilot-5884761360/output.1.b6081121-7116-4f43-a32c-9122ed079bfb_81723.pool.root does not exist (skip from workdir size calcula
[2023-06-22 07:27:38] 2023-06-22 05:26:56,514 | INFO     | total size of present files: 0 B (workdir size: 1109461 B)
[2023-06-22 07:27:38] 2023-06-22 05:26:56,514 | INFO     | output file size check: skipping output file /var/lib/boinc/slots/0/PanDA_Pilot-5884761360/output.1.b6081121-7116-4f43-a32c-9122ed079bfb_81723.pool.root since it d
[2023-06-22 07:27:38] 2023-06-22 05:26:56,537 | INFO     | number of running child processes to parent process 92009: 1
[2023-06-22 07:27:38] 2023-06-22 05:26:56,537 | INFO     | maximum number of monitored processes: 5
[2023-06-22 07:27:38] 2023-06-22 05:26:59,038 | INFO     | monitor loop #178: job 0:5884761360 is in state 'stageout'
[2023-06-22 07:27:38] 2023-06-22 05:26:59,061 | INFO     | number of running child processes to parent process 92009: 1
[2023-06-22 07:27:38] 2023-06-22 05:26:59,061 | INFO     | maximum number of monitored processes: 5
[2023-06-22 07:27:38] 2023-06-22 05:27:01,563 | INFO     | monitor loop #179: job 0:5884761360 is in state 'stageout'
[2023-06-22 07:27:38] 2023-06-22 05:27:01,587 | INFO     | number of running child processes to parent process 92009: 1
[2023-06-22 07:27:38] 2023-06-22 05:27:01,587 | INFO     | maximum number of monitored processes: 5
[2023-06-22 07:27:38] 2023-06-22 05:27:04,089 | INFO     | monitor loop #180: job 0:5884761360 is in state 'stageout'
[2023-06-22 07:27:38] 2023-06-22 05:27:04,113 | INFO     | number of running child processes to parent process 92009: 1
[2023-06-22 07:27:38] 2023-06-22 05:27:04,114 | INFO     | maximum number of monitored processes: 5
[2023-06-22 07:27:38] 2023-06-22 05:27:06,616 | INFO     | monitor loop #181: job 0:5884761360 is in state 'stageout'
[2023-06-22 07:27:38] 2023-06-22 05:27:06,640 | INFO     | number of running child processes to parent process 92009: 1
[2023-06-22 07:27:38] 2023-06-22 05:27:06,640 | INFO     | maximum number of monitored processes: 5
[2023-06-22 07:27:38] 2023-06-22 05:27:09,143 | INFO     | monitor loop #182: job 0:5884761360 is in state 'stageout'
[2023-06-22 07:27:38] 2023-06-22 05:27:09,167 | INFO     | number of running child processes to parent process 92009: 1
[2023-06-22 07:27:38] 2023-06-22 05:27:09,167 | INFO     | maximum number of monitored processes: 5
[2023-06-22 07:27:38] 2023-06-22 05:27:11,671 | INFO     | monitor loop #183: job 0:5884761360 is in state 'stageout'
[2023-06-22 07:27:38] 2023-06-22 05:27:11,694 | INFO     | number of running child processes to parent process 92009: 1
[2023-06-22 07:27:38] 2023-06-22 05:27:11,695 | INFO     | maximum number of monitored processes: 5
[2023-06-22 07:27:38] 2023-06-22 05:27:12,803 | INFO     | [attempt=3/3] loading data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json
[2023-06-22 07:27:38] 2023-06-22 05:27:12,894 | WARNING  | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: 
[2023-06-22 07:27:38] 2023-06-22 05:27:12,894 | WARNING  | cache file=/var/lib/boinc/slots/0/agis_ddmendpoints.agis.ALL.json is not available: [Errno 2] No such file or directory: '/var/lib/boinc/slots/0/agis_ddmendpoints.
[2023-06-22 07:27:38] 2023-06-22 05:27:12,925 | INFO     | transferring file b6081121-7116-4f43-a32c-9122ed079bfb_81723.1.job.log.tgz from /var/lib/boinc/slots/0/PanDA_Pilot-5884761360/b6081121-7116-4f43-a32c-9122ed079bfb_
[2023-06-22 07:27:38] 2023-06-22 05:27:12,925 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-5884761360/b6081121-7116-4f43-a32c-9122ed079bfb_81723.1.job.log.tgz /var/lib/boinc/slots/0/b6
[2023-06-22 07:27:38] 2023-06-22 05:27:12,931 | INFO     | Adding to output.list: b6081121-7116-4f43-a32c-9122ed079bfb_81723.1.job.log.tgz davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/11/8a/b6081121-7116-
[2023-06-22 07:27:38] 2023-06-22 05:27:12,932 | INFO     | executing command: ps aux -q 84821
[2023-06-22 07:27:38] 2023-06-22 05:27:12,938 | INFO     | summary of transferred files:
[2023-06-22 07:27:38] 2023-06-22 05:27:12,938 | INFO     |  -- lfn=b6081121-7116-4f43-a32c-9122ed079bfb_81723.1.job.log.tgz, status_code=0, status=transferred
[2023-06-22 07:27:38] 2023-06-22 05:27:12,938 | INFO     | stage-out finished correctly
[2023-06-22 07:27:38] 2023-06-22 05:27:14,197 | INFO     | monitor loop #184: job 0:5884761360 is in state 'finished'
[2023-06-22 07:27:38] 2023-06-22 05:27:14,198 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-06-22 07:27:38] 2023-06-22 05:27:15,189 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2023-06-22 07:27:38] 2023-06-22 05:27:15,783 | INFO     | job 5884761360 has state=finished
[2023-06-22 07:27:38] 2023-06-22 05:27:15,783 | INFO     | preparing for final server update for job 5884761360 in state='finished'
[2023-06-22 07:27:38] 2023-06-22 05:27:15,783 | INFO     | this job has now completed (state=finished)
[2023-06-22 07:27:38] 2023-06-22 05:27:15,783 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2023-06-22 07:27:38] 2023-06-22 05:27:15,783 | INFO     | job 5884761360 has finished - writing final server update
[2023-06-22 07:27:38] 2023-06-22 05:27:15,784 | WARNING  | wrong length of table data, x=[1687410853.0, 1687410914.0, 1687410975.0, 1687411036.0, 1687411097.0, 1687411158.0, 1687411219.0], y=[2840.0, 1233965.0, 1713253.0, 
[2023-06-22 07:27:38] 2023-06-22 05:27:15,784 | INFO     | total number of processed events: 2 (read)
[2023-06-22 07:27:38] 2023-06-22 05:27:15,785 | INFO     | executing command: lscpu
[2023-06-22 07:27:38] 2023-06-22 05:27:15,791 | INFO     | found 1 cores (1 cores per socket, 1 sockets)
[2023-06-22 07:27:38] 2023-06-22 05:27:15,791 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2023-06-22 07:27:38] 2023-06-22 05:27:15,802 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2023-06-22 07:27:38] 2023-06-22 05:27:16,732 | INFO     | monitor loop #185: job 0:5884761360 is in state 'finished'
[2023-06-22 07:27:38] 2023-06-22 05:27:16,732 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-06-22 07:27:38] 2023-06-22 05:27:19,076 | INFO     | executing command: python3 /var/lib/boinc/slots/0/pilot3/pilot/scripts/cpu_arch.py --alg gcc
[2023-06-22 07:27:38] 2023-06-22 05:27:19,139 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-5884761360/memory_monitor_summary.json (trf name=prmon)
[2023-06-22 07:27:38] 2023-06-22 05:27:19,140 | INFO     | extracted standard info from prmon json
[2023-06-22 07:27:38] 2023-06-22 05:27:19,140 | INFO     | extracted standard memory fields from prmon json
[2023-06-22 07:27:38] 2023-06-22 05:27:19,140 | INFO     | ..............................
[2023-06-22 07:27:38] 2023-06-22 05:27:19,140 | INFO     | . Timing measurements:
[2023-06-22 07:27:38] 2023-06-22 05:27:19,140 | INFO     | . get job = 57 s
[2023-06-22 07:27:38] 2023-06-22 05:27:19,140 | INFO     | . initial setup = 55 s
[2023-06-22 07:27:38] 2023-06-22 05:27:19,140 | INFO     | . payload setup = 5 s
[2023-06-22 07:27:38] 2023-06-22 05:27:19,140 | INFO     | . stage-in = 61 s
[2023-06-22 07:27:38] 2023-06-22 05:27:19,140 | INFO     | . payload execution = 405 s
[2023-06-22 07:27:38] 2023-06-22 05:27:19,140 | INFO     | . stage-out = 375 s
[2023-06-22 07:27:38] 2023-06-22 05:27:19,140 | INFO     | ..............................
[2023-06-22 07:27:38] 2023-06-22 05:27:19,636 | INFO     | 
[2023-06-22 07:27:38] 2023-06-22 05:27:19,636 | INFO     | job summary report
[2023-06-22 07:27:38] 2023-06-22 05:27:19,637 | INFO     | --------------------------------------------------
[2023-06-22 07:27:38] 2023-06-22 05:27:19,637 | INFO     | PanDA job id: 5884761360
[2023-06-22 07:27:38] 2023-06-22 05:27:19,637 | INFO     | task id: NULL
[2023-06-22 07:27:38] 2023-06-22 05:27:19,637 | INFO     | errors: (none)
[2023-06-22 07:27:38] 2023-06-22 05:27:19,637 | INFO     | status: LOG_TRANSFER = DONE 
[2023-06-22 07:27:38] 2023-06-22 05:27:19,637 | INFO     | pilot state: finished 
[2023-06-22 07:27:38] 2023-06-22 05:27:19,637 | INFO     | transexitcode: 0
[2023-06-22 07:27:38] 2023-06-22 05:27:19,637 | INFO     | exeerrorcode: 0
[2023-06-22 07:27:38] 2023-06-22 05:27:19,637 | INFO     | exeerrordiag: 
[2023-06-22 07:27:38] 2023-06-22 05:27:19,637 | INFO     | exitcode: 0
[2023-06-22 07:27:38] 2023-06-22 05:27:19,637 | INFO     | exitmsg: OK
[2023-06-22 07:27:38] 2023-06-22 05:27:19,637 | INFO     | cpuconsumptiontime: 376 s
[2023-06-22 07:27:38] 2023-06-22 05:27:19,637 | INFO     | nevents: 2
[2023-06-22 07:27:38] 2023-06-22 05:27:19,637 | INFO     | neventsw: 0
[2023-06-22 07:27:38] 2023-06-22 05:27:19,637 | INFO     | pid: 92009
[2023-06-22 07:27:38] 2023-06-22 05:27:19,637 | INFO     | pgrp: 92009
[2023-06-22 07:27:38] 2023-06-22 05:27:19,637 | INFO     | corecount: 1
[2023-06-22 07:27:38] 2023-06-22 05:27:19,637 | INFO     | event service: False
[2023-06-22 07:27:38] 2023-06-22 05:27:19,637 | INFO     | sizes: {0: 2490701, 11: 2490847, 21: 2490875, 32: 2490903, 42: 2490931, 53: 2490959, 63: 2491175, 64: 2491203, 414: 2510689, 791: 2519999, 793: 2520055, 797: 25205
[2023-06-22 07:27:38] 2023-06-22 05:27:19,637 | INFO     | --------------------------------------------------
[2023-06-22 07:27:38] 2023-06-22 05:27:19,637 | INFO     | 
[2023-06-22 07:27:38] 2023-06-22 05:27:19,637 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2023-06-22 07:27:38] 2023-06-22 05:27:19,644 | INFO     | queue jobs had 0 job(s) [purged]
[2023-06-22 07:27:38] 2023-06-22 05:27:19,644 | INFO     | queue payloads had 0 job(s) [purged]
[2023-06-22 07:27:38] 2023-06-22 05:27:19,644 | INFO     | queue data_in had 0 job(s) [purged]
[2023-06-22 07:27:38] 2023-06-22 05:27:19,645 | INFO     | queue data_out had 0 job(s) [purged]
[2023-06-22 07:27:38] 2023-06-22 05:27:19,645 | INFO     | queue current_data_in had 0 job(s) [purged]
[2023-06-22 07:27:38] 2023-06-22 05:27:19,645 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2023-06-22 07:27:38] 2023-06-22 05:27:19,645 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2023-06-22 07:27:38] 2023-06-22 05:27:19,645 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2023-06-22 07:27:38] 2023-06-22 05:27:19,645 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2023-06-22 07:27:38] 2023-06-22 05:27:19,645 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2023-06-22 07:27:38] 2023-06-22 05:27:19,645 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2023-06-22 07:27:38] 2023-06-22 05:27:19,645 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2023-06-22 07:27:38] 2023-06-22 05:27:19,645 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2023-06-22 07:27:38] 2023-06-22 05:27:19,645 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2023-06-22 07:27:38] 2023-06-22 05:27:19,645 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2023-06-22 07:27:38] 2023-06-22 05:27:19,645 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2023-06-22 07:27:38] 2023-06-22 05:27:19,645 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2023-06-22 07:27:38] 2023-06-22 05:27:19,645 | INFO     | queue completed_jobids has 1 job(s)
[2023-06-22 07:27:38] 2023-06-22 05:27:19,645 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2023-06-22 07:27:38] 2023-06-22 05:27:19,645 | INFO     | queue messages had 0 job(s) [purged]
[2023-06-22 07:27:38] 2023-06-22 05:27:19,645 | INFO     | job 5884761360 has completed (purged errors)
[2023-06-22 07:27:38] 2023-06-22 05:27:19,645 | INFO     | overall cleanup function is called
[2023-06-22 07:27:38] 2023-06-22 05:27:20,650 | INFO     | --- collectZombieJob: --- 10, [92009]
[2023-06-22 07:27:38] 2023-06-22 05:27:20,650 | INFO     | zombie collector trying to kill pid 92009
[2023-06-22 07:27:38] 2023-06-22 05:27:20,650 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2023-06-22 07:27:38] 2023-06-22 05:27:21,655 | INFO     | collected zombie processes
[2023-06-22 07:27:38] 2023-06-22 05:27:21,655 | INFO     | will now attempt to kill all subprocesses of pid=92009
[2023-06-22 07:27:38] 2023-06-22 05:27:21,681 | INFO     | process IDs to be killed: [92009] (in reverse order)
[2023-06-22 07:27:38] 2023-06-22 05:27:21,696 | WARNING  | found no corresponding commands to process id(s)
[2023-06-22 07:27:38] 2023-06-22 05:27:21,696 | INFO     | Do not look for orphan processes in BOINC jobs
[2023-06-22 07:27:38] 2023-06-22 05:27:21,696 | INFO     | ready for new job
[2023-06-22 07:27:38] 2023-06-22 05:27:21,696 | INFO     | pilot has finished with previous job - re-establishing logging
[2023-06-22 07:27:38] 2023-06-22 05:27:21,696 | INFO     | *****************************************
[2023-06-22 07:27:38] 2023-06-22 05:27:21,696 | INFO     | ***  PanDA Pilot version 3.6.0 (108)  ***
[2023-06-22 07:27:38] 2023-06-22 05:27:21,696 | INFO     | *****************************************
[2023-06-22 07:27:38] 2023-06-22 05:27:21,696 | INFO     | 
[2023-06-22 07:27:38] 2023-06-22 05:27:21,697 | INFO     | pilot is running in a VM
[2023-06-22 07:27:38] 2023-06-22 05:27:21,697 | INFO     | architecture information:
[2023-06-22 07:27:38] 2023-06-22 05:27:21,697 | INFO     | executing command: cat /etc/os-release
[2023-06-22 07:27:38] 2023-06-22 05:27:21,702 | INFO     | cat /etc/os-release:
[2023-06-22 07:27:38] NAME="CentOS Linux"
[2023-06-22 07:27:38] VERSION="7 (Core)"
[2023-06-22 07:27:38] ID="centos"
[2023-06-22 07:27:38] ID_LIKE="rhel fedora"
[2023-06-22 07:27:38] VERSION_ID="7"
[2023-06-22 07:27:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2023-06-22 07:27:38] ANSI_COLOR="0;31"
[2023-06-22 07:27:38] CPE_NAME="cpe:/o:centos:centos:7"
[2023-06-22 07:27:38] HOME_URL="https://www.centos.org/"
[2023-06-22 07:27:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2023-06-22 07:27:38] 
[2023-06-22 07:27:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2023-06-22 07:27:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2023-06-22 07:27:38] REDHAT_SUPPORT_PRODUCT="centos"
[2023-06-22 07:27:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2023-06-22 07:27:38] 
[2023-06-22 07:27:38] 2023-06-22 05:27:21,702 | INFO     | *****************************************
[2023-06-22 07:27:38] 2023-06-22 05:27:22,205 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2023-06-22 07:27:38] 2023-06-22 05:27:22,211 | INFO     | sufficient remaining disk space (23210229760 B)
[2023-06-22 07:27:38] 2023-06-22 05:27:22,211 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2023-06-22 07:27:38] 2023-06-22 05:27:22,212 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2023-06-22 07:27:38] 2023-06-22 05:27:22,212 | INFO     | [job] retrieve thread has finished
[2023-06-22 07:27:38] 2023-06-22 05:27:22,212 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2023-06-22 07:27:38] 2023-06-22 05:27:22,245 | INFO     | [data] control thread has finished
[2023-06-22 07:27:38] 2023-06-22 05:27:22,554 | INFO     | [payload] execute_payloads thread has finished
[2023-06-22 07:27:38] 2023-06-22 05:27:22,580 | INFO     | found 0 job(s) in 20 queues
[2023-06-22 07:27:38] 2023-06-22 05:27:22,580 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2023-06-22 07:27:38] 2023-06-22 05:27:22,580 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2023-06-22 07:27:38] 2023-06-22 05:27:22,604 | INFO     | [payload] control thread has finished
[2023-06-22 07:27:38] 2023-06-22 05:27:22,688 | INFO     | [job] control thread has finished
[2023-06-22 07:27:38] 2023-06-22 05:27:22,751 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2023-06-22 07:27:38] 2023-06-22 05:27:22,752 | INFO     | aborting loop
[2023-06-22 07:27:38] 2023-06-22 05:27:22,752 | INFO     | [job] job monitor thread has finished
[2023-06-22 07:27:38] 2023-06-22 05:27:22,785 | INFO     | [payload] validate_post thread has finished
[2023-06-22 07:27:38] 2023-06-22 05:27:22,829 | INFO     | [job] validate thread has finished
[2023-06-22 07:27:38] 2023-06-22 05:27:22,829 | INFO     | [job] create_data_payload thread has finished
[2023-06-22 07:27:38] 2023-06-22 05:27:22,830 | INFO     | [payload] validate_pre thread has finished
[2023-06-22 07:27:38] 2023-06-22 05:27:23,051 | INFO     | [payload] failed_post thread has finished
[2023-06-22 07:27:38] 2023-06-22 05:27:23,203 | INFO     | [data] copytool_in thread has finished
[2023-06-22 07:27:38] 2023-06-22 05:27:23,521 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2023-06-22 07:27:38] 2023-06-22 05:27:24,194 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2023-06-22 07:27:38] 2023-06-22 05:27:24,194 | INFO     | [job] queue monitor thread has finished
[2023-06-22 07:27:38] 2023-06-22 05:27:24,521 | INFO     | [data] copytool_out thread has finished
[2023-06-22 07:27:38] 2023-06-22 05:27:25,212 | INFO     | [data] queue_monitor thread has finished
[2023-06-22 07:27:38] 2023-06-22 05:27:32,634 | INFO     | job.realtimelogging is not enabled
[2023-06-22 07:27:38] 2023-06-22 05:27:32,635 | INFO     | [payload] run_realtimelog thread has finished
[2023-06-22 07:27:38] 2023-06-22 05:27:33,061 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139744442910528)>', '<ExcThread(monitor, started 139743799011072)>']
[2023-06-22 07:27:38] 2023-06-22 05:27:33,612 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2023-06-22 07:27:38] 2023-06-22 05:27:33,612 | INFO     | [monitor] control thread has ended
[2023-06-22 07:27:38] 2023-06-22 05:27:38,074 | INFO     | end of generic workflow (traces error code: 0)
[2023-06-22 07:27:38] 2023-06-22 05:27:38,075 | INFO     | traces error code: 0
[2023-06-22 07:27:38] 2023-06-22 05:27:38,075 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2023-06-22 07:27:38] 2023-06-22 05:27:38,115 [wrapper] ==== pilot stdout END ====
[2023-06-22 07:27:38] 2023-06-22 05:27:38,116 [wrapper] ==== wrapper stdout RESUME ====
[2023-06-22 07:27:38] 2023-06-22 05:27:38,117 [wrapper] pilotpid: 84821
[2023-06-22 07:27:38] 2023-06-22 05:27:38,118 [wrapper] Pilot exit status: 0
[2023-06-22 07:27:38] 2023-06-22 05:27:38,122 [wrapper] pandaids: 5884761360
[2023-06-22 07:27:38] 2023-06-22 05:27:38,124 [wrapper] apfmon messages muted
[2023-06-22 07:27:38] 2023-06-22 05:27:38,125 [wrapper] Test setup, not cleaning
[2023-06-22 07:27:38] 2023-06-22 05:27:38,126 [wrapper] ==== wrapper stdout END ====
[2023-06-22 07:27:38] 2023-06-22 05:27:38,127 [wrapper] ==== wrapper stderr END ====
[2023-06-22 07:27:38] 2023-06-22 05:27:38,129 [wrapper] wrapperexiting ec=0, duration=997
[2023-06-22 07:27:38] 2023-06-22 05:27:38,129 [wrapper] apfmon messages muted
[2023-06-22 07:27:38]  *** Error codes and diagnostics ***
[2023-06-22 07:27:38]     "exeErrorCode": 0,
[2023-06-22 07:27:38]     "exeErrorDiag": "",
[2023-06-22 07:27:38]     "pilotErrorCode": 0,
[2023-06-22 07:27:38]     "pilotErrorDiag": "",
[2023-06-22 07:27:38]  *** Listing of results directory ***
[2023-06-22 07:27:38] insgesamt 44360
[2023-06-22 07:27:38] -rw-r--r--. 1 boinc boinc   410584 22. Jun 06:44 pilot3.tar.gz
[2023-06-22 07:27:38] -rw-r--r--. 1 boinc boinc     4388 22. Jun 06:56 queuedata.json
[2023-06-22 07:27:38] -rwx------. 1 boinc boinc    27012 22. Jun 06:58 runpilot2-wrapper.sh
[2023-06-22 07:27:38] -rw-r--r--. 1 boinc boinc      107 22. Jun 07:11 wrapper_26015_x86_64-pc-linux-gnu
[2023-06-22 07:27:38] -rwxr-xr-x. 1 boinc boinc     7986 22. Jun 07:11 run_atlas
[2023-06-22 07:27:38] -rw-r--r--. 1 boinc boinc      112 22. Jun 07:11 job.xml
[2023-06-22 07:27:38] -rw-r--r--. 2 boinc boinc    17604 22. Jun 07:11 start_atlas.sh
[2023-06-22 07:27:38] drwxrwx--x. 2 boinc boinc       68 22. Jun 07:11 shared
[2023-06-22 07:27:38] -rw-r--r--. 2 boinc boinc   421975 22. Jun 07:11 input.tar.gz
[2023-06-22 07:27:38] -rw-r--r--. 1 boinc boinc     6195 22. Jun 07:11 init_data.xml
[2023-06-22 07:27:38] -rw-r--r--. 2 boinc boinc 37620382 22. Jun 07:11 EVNT.04972714._000038.pool.root.1
[2023-06-22 07:27:38] -rw-r--r--. 1 boinc boinc        0 22. Jun 07:11 boinc_lockfile
[2023-06-22 07:27:38] -rw-r--r--. 1 boinc boinc     2752 22. Jun 07:11 pandaJob.out
[2023-06-22 07:27:38] -rw-------. 1 boinc boinc      461 22. Jun 07:11 setup.sh.local
[2023-06-22 07:27:38] -rw-------. 1 boinc boinc  1017869 22. Jun 07:11 agis_schedconf.cvmfs.json
[2023-06-22 07:27:38] -rw-------. 1 boinc boinc  1393681 22. Jun 07:11 cric_ddmendpoints.json
[2023-06-22 07:27:38] drwx------. 4 boinc boinc     4096 22. Jun 07:12 pilot3
[2023-06-22 07:27:38] -rw-------. 1 boinc boinc  1857349 22. Jun 07:20 output.1.b6081121-7116-4f43-a32c-9122ed079bfb_81723.pool.root
[2023-06-22 07:27:38] -rw-r--r--. 1 boinc boinc      532 22. Jun 07:20 boinc_task_state.xml
[2023-06-22 07:27:38] -rw-------. 1 boinc boinc     1009 22. Jun 07:20 memory_monitor_summary.json
[2023-06-22 07:27:38] -rw-------. 1 boinc boinc   152953 22. Jun 07:23 b6081121-7116-4f43-a32c-9122ed079bfb_81723.1.job.log.tgz
[2023-06-22 07:27:38] -rw-------. 1 boinc boinc     6629 22. Jun 07:27 heartbeat.json
[2023-06-22 07:27:38] -rw-r--r--. 1 boinc boinc     8192 22. Jun 07:27 boinc_mmap_file
[2023-06-22 07:27:38] -rw-r--r--. 1 boinc boinc       24 22. Jun 07:27 wrapper_checkpoint.txt
[2023-06-22 07:27:38] -rw-------. 1 boinc boinc     4047 22. Jun 07:27 pilotlog.txt
[2023-06-22 07:27:38] -rw-------. 1 boinc boinc   160026 22. Jun 07:27 b6081121-7116-4f43-a32c-9122ed079bfb_81723.1.job.log
[2023-06-22 07:27:38] -rw-------. 1 boinc boinc      464 22. Jun 07:27 output.list
[2023-06-22 07:27:38] -rw-r--r--. 1 boinc boinc    12210 22. Jun 07:27 runtime_log.err
[2023-06-22 07:27:38] -rw-r--r--. 1 boinc boinc      748 22. Jun 07:27 runtime_log
[2023-06-22 07:27:38] -rw-------. 1 boinc boinc  2191360 22. Jun 07:27 result.tar.gz
[2023-06-22 07:27:38] -rw-------. 1 boinc boinc      628 22. Jun 07:27 06BODmqZRW3n7Olcko1bjSoqABFKDmABFKDm7AsVDmQwLKDmkawIVn.diag
[2023-06-22 07:27:38] -rw-r--r--. 1 boinc boinc    22807 22. Jun 07:27 stderr.txt
[2023-06-22 07:27:38] HITS file was successfully produced:
[2023-06-22 07:27:38] -rw-------. 1 boinc boinc 1857349 22. Jun 07:20 shared/HITS.pool.root.1
[2023-06-22 07:27:38]  *** Contents of shared directory: ***
[2023-06-22 07:27:38] insgesamt 41132
[2023-06-22 07:27:38] -rw-r--r--. 2 boinc boinc    17604 22. Jun 07:11 start_atlas.sh
[2023-06-22 07:27:38] -rw-r--r--. 2 boinc boinc   421975 22. Jun 07:11 input.tar.gz
[2023-06-22 07:27:38] -rw-r--r--. 2 boinc boinc 37620382 22. Jun 07:11 ATLAS.root_0
[2023-06-22 07:27:38] -rw-------. 1 boinc boinc  1857349 22. Jun 07:20 HITS.pool.root.1
[2023-06-22 07:27:38] -rw-------. 1 boinc boinc  2191360 22. Jun 07:27 result.tar.gz
07:27:39 (81711): run_atlas exited; CPU time 378.209287
07:27:39 (81711): called boinc_finish(0)

</stderr_txt>
]]>


©2024 CERN