Name F0aMDm1XUX3n7Olcko1bjSoqABFKDmABFKDm7AsVDm46LKDmYAIF0n_0
Workunit 2314369
Created 25 Jun 2023, 2:20:50 UTC
Sent 25 Jun 2023, 2:21:26 UTC
Report deadline 2 Jul 2023, 2:21:26 UTC
Received 25 Jun 2023, 2:57:09 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 1498
Run time 32 min 44 sec
CPU time 4 min 17 sec
Validate state Valid
Credit 23.64
Device peak FLOPS 13.02 GFLOPS
Application version ATLAS Simulation v3.01 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 2.62 GB
Peak swap size 3.12 GB
Peak disk usage 82.19 MB

Stderr output

<core_client_version>7.4.25</core_client_version>
<![CDATA[
<stderr_txt>
03:22:36 (3255): wrapper (7.7.26015): starting
03:22:36 (3255): wrapper: running run_atlas (--nthreads 4)
[2023-06-25 03:22:36] Arguments: --nthreads 4
[2023-06-25 03:22:36] Threads: 4
[2023-06-25 03:22:36] Checking for CVMFS
[2023-06-25 03:22:42] Probing /cvmfs/atlas.cern.ch... OK
[2023-06-25 03:22:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2023-06-25 03:22:47] Running cvmfs_config stat atlas.cern.ch
[2023-06-25 03:22:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2023-06-25 03:22:47] 2.9.0.0 3479 0 24444 120540 3 1 2586642 4194305 0 130560 0 0 0.000 828 441 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.100.152:3128 1
[2023-06-25 03:22:47] CVMFS is ok
[2023-06-25 03:22:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2023-06-25 03:22:47] Checking for apptainer binary...
[2023-06-25 03:22:47] Using apptainer found in PATH at /usr/bin/apptainer
[2023-06-25 03:22:47] Running /usr/bin/apptainer --version
[2023-06-25 03:22:48] apptainer version 1.0.3
[2023-06-25 03:22:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2023-06-25 03:22:49] TeeC16
[2023-06-25 03:22:49] apptainer works
[2023-06-25 03:22:49] Set ATHENA_PROC_NUMBER=4
[2023-06-25 03:22:49] Set ATHENA_CORE_NUMBER=4
[2023-06-25 03:22:49] Starting ATLAS job with PandaID=5887770219
[2023-06-25 03:22:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/m/BOINC/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2023-06-25 03:55:17]  *** The last 200 lines of the pilot log: ***
[2023-06-25 03:55:17] 2023-06-25 02:53:55,189 | INFO     | monitor loop #259: job 0:5887770219 is in state 'finished'
[2023-06-25 03:55:17] 2023-06-25 02:53:55,197 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-06-25 03:55:17] 2023-06-25 02:53:57,700 | INFO     | monitor loop #260: job 0:5887770219 is in state 'finished'
[2023-06-25 03:55:17] 2023-06-25 02:53:57,701 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-06-25 03:55:17] 2023-06-25 02:54:00,202 | INFO     | monitor loop #261: job 0:5887770219 is in state 'finished'
[2023-06-25 03:55:17] 2023-06-25 02:54:00,203 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-06-25 03:55:17] 2023-06-25 02:54:02,705 | INFO     | monitor loop #262: job 0:5887770219 is in state 'finished'
[2023-06-25 03:55:17] 2023-06-25 02:54:02,706 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-06-25 03:55:17] 2023-06-25 02:54:05,209 | INFO     | monitor loop #263: job 0:5887770219 is in state 'finished'
[2023-06-25 03:55:17] 2023-06-25 02:54:05,210 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-06-25 03:55:17] 2023-06-25 02:54:07,713 | INFO     | monitor loop #264: job 0:5887770219 is in state 'finished'
[2023-06-25 03:55:17] 2023-06-25 02:54:07,713 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-06-25 03:55:17] 2023-06-25 02:54:10,216 | INFO     | monitor loop #265: job 0:5887770219 is in state 'finished'
[2023-06-25 03:55:17] 2023-06-25 02:54:10,218 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-06-25 03:55:17] 2023-06-25 02:54:12,721 | INFO     | monitor loop #266: job 0:5887770219 is in state 'finished'
[2023-06-25 03:55:17] 2023-06-25 02:54:12,721 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-06-25 03:55:17] 2023-06-25 02:54:15,223 | INFO     | monitor loop #267: job 0:5887770219 is in state 'finished'
[2023-06-25 03:55:17] 2023-06-25 02:54:15,224 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-06-25 03:55:17] 2023-06-25 02:54:17,727 | INFO     | monitor loop #268: job 0:5887770219 is in state 'finished'
[2023-06-25 03:55:17] 2023-06-25 02:54:17,727 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-06-25 03:55:17] 2023-06-25 02:54:20,230 | INFO     | monitor loop #269: job 0:5887770219 is in state 'finished'
[2023-06-25 03:55:17] 2023-06-25 02:54:20,232 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-06-25 03:55:17] 2023-06-25 02:54:22,735 | INFO     | monitor loop #270: job 0:5887770219 is in state 'finished'
[2023-06-25 03:55:17] 2023-06-25 02:54:22,735 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-06-25 03:55:17] 2023-06-25 02:54:25,238 | INFO     | monitor loop #271: job 0:5887770219 is in state 'finished'
[2023-06-25 03:55:17] 2023-06-25 02:54:25,241 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-06-25 03:55:17] 2023-06-25 02:54:27,742 | INFO     | monitor loop #272: job 0:5887770219 is in state 'finished'
[2023-06-25 03:55:17] 2023-06-25 02:54:27,743 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-06-25 03:55:17] 2023-06-25 02:54:30,246 | INFO     | monitor loop #273: job 0:5887770219 is in state 'finished'
[2023-06-25 03:55:17] 2023-06-25 02:54:30,246 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-06-25 03:55:17] 2023-06-25 02:54:32,749 | INFO     | monitor loop #274: job 0:5887770219 is in state 'finished'
[2023-06-25 03:55:17] 2023-06-25 02:54:32,749 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-06-25 03:55:17] 2023-06-25 02:54:35,250 | INFO     | monitor loop #275: job 0:5887770219 is in state 'finished'
[2023-06-25 03:55:17] 2023-06-25 02:54:35,250 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-06-25 03:55:17] 2023-06-25 02:54:37,751 | INFO     | monitor loop #276: job 0:5887770219 is in state 'finished'
[2023-06-25 03:55:17] 2023-06-25 02:54:37,751 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-06-25 03:55:17] 2023-06-25 02:54:40,254 | INFO     | monitor loop #277: job 0:5887770219 is in state 'finished'
[2023-06-25 03:55:17] 2023-06-25 02:54:40,256 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-06-25 03:55:17] 2023-06-25 02:54:42,759 | INFO     | monitor loop #278: job 0:5887770219 is in state 'finished'
[2023-06-25 03:55:17] 2023-06-25 02:54:42,759 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-06-25 03:55:17] 2023-06-25 02:54:45,049 | INFO     | this job has now completed (state=finished)
[2023-06-25 03:55:17] 2023-06-25 02:54:45,049 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2023-06-25 03:55:17] 2023-06-25 02:54:45,049 | INFO     | job 5887770219 has finished - writing final server update
[2023-06-25 03:55:17] 2023-06-25 02:54:45,051 | INFO     | fitting pss+swap vs Time
[2023-06-25 03:55:17] 2023-06-25 02:54:45,052 | INFO     | current memory leak: 2599.04 B/s (using 13 data points, chi2=0.21)
[2023-06-25 03:55:17] 2023-06-25 02:54:45,052 | INFO     | total number of processed events: 2 (read)
[2023-06-25 03:55:17] 2023-06-25 02:54:45,072 | INFO     | executing command: lscpu
[2023-06-25 03:55:17] 2023-06-25 02:54:45,091 | INFO     | found 2 cores (2 cores per socket, 1 sockets)
[2023-06-25 03:55:17] 2023-06-25 02:54:45,091 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2023-06-25 03:55:17] 2023-06-25 02:54:45,121 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2023-06-25 03:55:17] 2023-06-25 02:54:45,262 | INFO     | monitor loop #279: job 0:5887770219 is in state 'finished'
[2023-06-25 03:55:17] 2023-06-25 02:54:45,264 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-06-25 03:55:17] 2023-06-25 02:54:47,767 | INFO     | monitor loop #280: job 0:5887770219 is in state 'finished'
[2023-06-25 03:55:17] 2023-06-25 02:54:47,768 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-06-25 03:55:17] 2023-06-25 02:54:50,271 | INFO     | monitor loop #281: job 0:5887770219 is in state 'finished'
[2023-06-25 03:55:17] 2023-06-25 02:54:50,271 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-06-25 03:55:17] 2023-06-25 02:54:52,778 | INFO     | monitor loop #282: job 0:5887770219 is in state 'finished'
[2023-06-25 03:55:17] 2023-06-25 02:54:52,778 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-06-25 03:55:17] 2023-06-25 02:54:55,281 | INFO     | monitor loop #283: job 0:5887770219 is in state 'finished'
[2023-06-25 03:55:17] 2023-06-25 02:54:55,281 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-06-25 03:55:17] 2023-06-25 02:54:56,778 | INFO     | executing command: python3 /home/m/BOINC/slots/3/pilot3/pilot/scripts/cpu_arch.py --alg gcc
[2023-06-25 03:55:17] 2023-06-25 02:54:56,880 | INFO     | using path: /home/m/BOINC/slots/3/PanDA_Pilot-5887770219/memory_monitor_summary.json (trf name=prmon)
[2023-06-25 03:55:17] 2023-06-25 02:54:56,881 | INFO     | extracted standard info from prmon json
[2023-06-25 03:55:17] 2023-06-25 02:54:56,881 | INFO     | extracted standard memory fields from prmon json
[2023-06-25 03:55:17] 2023-06-25 02:54:56,881 | INFO     | ..............................
[2023-06-25 03:55:17] 2023-06-25 02:54:56,881 | INFO     | . Timing measurements:
[2023-06-25 03:55:17] 2023-06-25 02:54:56,881 | INFO     | . get job = 69 s
[2023-06-25 03:55:17] 2023-06-25 02:54:56,881 | INFO     | . initial setup = 60 s
[2023-06-25 03:55:17] 2023-06-25 02:54:56,881 | INFO     | . payload setup = 32 s
[2023-06-25 03:55:17] 2023-06-25 02:54:56,881 | INFO     | . stage-in = 73 s
[2023-06-25 03:55:17] 2023-06-25 02:54:56,881 | INFO     | . payload execution = 1176 s
[2023-06-25 03:55:17] 2023-06-25 02:54:56,882 | INFO     | . stage-out = 370 s
[2023-06-25 03:55:17] 2023-06-25 02:54:56,882 | INFO     | ..............................
[2023-06-25 03:55:17] 2023-06-25 02:54:57,247 | INFO     | 
[2023-06-25 03:55:17] 2023-06-25 02:54:57,247 | INFO     | job summary report
[2023-06-25 03:55:17] 2023-06-25 02:54:57,247 | INFO     | --------------------------------------------------
[2023-06-25 03:55:17] 2023-06-25 02:54:57,247 | INFO     | PanDA job id: 5887770219
[2023-06-25 03:55:17] 2023-06-25 02:54:57,247 | INFO     | task id: NULL
[2023-06-25 03:55:17] 2023-06-25 02:54:57,247 | INFO     | errors: (none)
[2023-06-25 03:55:17] 2023-06-25 02:54:57,247 | INFO     | status: LOG_TRANSFER = DONE 
[2023-06-25 03:55:17] 2023-06-25 02:54:57,248 | INFO     | pilot state: finished 
[2023-06-25 03:55:17] 2023-06-25 02:54:57,248 | INFO     | transexitcode: 0
[2023-06-25 03:55:17] 2023-06-25 02:54:57,248 | INFO     | exeerrorcode: 0
[2023-06-25 03:55:17] 2023-06-25 02:54:57,248 | INFO     | exeerrordiag: 
[2023-06-25 03:55:17] 2023-06-25 02:54:57,248 | INFO     | exitcode: 0
[2023-06-25 03:55:17] 2023-06-25 02:54:57,248 | INFO     | exitmsg: OK
[2023-06-25 03:55:17] 2023-06-25 02:54:57,248 | INFO     | cpuconsumptiontime: 274 s
[2023-06-25 03:55:17] 2023-06-25 02:54:57,249 | INFO     | nevents: 2
[2023-06-25 03:55:17] 2023-06-25 02:54:57,249 | INFO     | neventsw: 0
[2023-06-25 03:55:17] 2023-06-25 02:54:57,249 | INFO     | pid: 13575
[2023-06-25 03:55:17] 2023-06-25 02:54:57,249 | INFO     | pgrp: 13575
[2023-06-25 03:55:17] 2023-06-25 02:54:57,249 | INFO     | corecount: 4
[2023-06-25 03:55:17] 2023-06-25 02:54:57,249 | INFO     | event service: False
[2023-06-25 03:55:17] 2023-06-25 02:54:57,249 | INFO     | sizes: {0: 2490531, 1: 2490559, 11: 2490705, 22: 2490733, 32: 2490761, 43: 2490789, 54: 2490945, 64: 2490973, 75: 2491029, 78: 2491117, 85: 2491145, 1213: 2513204,
[2023-06-25 03:55:17] 2023-06-25 02:54:57,250 | INFO     | --------------------------------------------------
[2023-06-25 03:55:17] 2023-06-25 02:54:57,250 | INFO     | 
[2023-06-25 03:55:17] 2023-06-25 02:54:57,250 | INFO     | executing command: ls -lF /home/m/BOINC/slots/3
[2023-06-25 03:55:17] 2023-06-25 02:54:57,271 | INFO     | queue jobs had 0 job(s) [purged]
[2023-06-25 03:55:17] 2023-06-25 02:54:57,272 | INFO     | queue payloads had 0 job(s) [purged]
[2023-06-25 03:55:17] 2023-06-25 02:54:57,272 | INFO     | queue data_in had 0 job(s) [purged]
[2023-06-25 03:55:17] 2023-06-25 02:54:57,272 | INFO     | queue data_out had 0 job(s) [purged]
[2023-06-25 03:55:17] 2023-06-25 02:54:57,272 | INFO     | queue current_data_in had 0 job(s) [purged]
[2023-06-25 03:55:17] 2023-06-25 02:54:57,272 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2023-06-25 03:55:17] 2023-06-25 02:54:57,272 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2023-06-25 03:55:17] 2023-06-25 02:54:57,272 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2023-06-25 03:55:17] 2023-06-25 02:54:57,272 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2023-06-25 03:55:17] 2023-06-25 02:54:57,272 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2023-06-25 03:55:17] 2023-06-25 02:54:57,272 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2023-06-25 03:55:17] 2023-06-25 02:54:57,273 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2023-06-25 03:55:17] 2023-06-25 02:54:57,273 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2023-06-25 03:55:17] 2023-06-25 02:54:57,273 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2023-06-25 03:55:17] 2023-06-25 02:54:57,273 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2023-06-25 03:55:17] 2023-06-25 02:54:57,273 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2023-06-25 03:55:17] 2023-06-25 02:54:57,273 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2023-06-25 03:55:17] 2023-06-25 02:54:57,273 | INFO     | queue completed_jobids has 1 job(s)
[2023-06-25 03:55:17] 2023-06-25 02:54:57,273 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2023-06-25 03:55:17] 2023-06-25 02:54:57,273 | INFO     | queue messages had 0 job(s) [purged]
[2023-06-25 03:55:17] 2023-06-25 02:54:57,273 | INFO     | job 5887770219 has completed (purged errors)
[2023-06-25 03:55:17] 2023-06-25 02:54:57,274 | INFO     | overall cleanup function is called
[2023-06-25 03:55:17] 2023-06-25 02:54:58,281 | INFO     | --- collectZombieJob: --- 10, [13575]
[2023-06-25 03:55:17] 2023-06-25 02:54:58,281 | INFO     | zombie collector trying to kill pid 13575
[2023-06-25 03:55:17] 2023-06-25 02:54:58,281 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2023-06-25 03:55:17] 2023-06-25 02:54:59,286 | INFO     | collected zombie processes
[2023-06-25 03:55:17] 2023-06-25 02:54:59,286 | INFO     | will now attempt to kill all subprocesses of pid=13575
[2023-06-25 03:55:17] 2023-06-25 02:54:59,331 | INFO     | process IDs to be killed: [13575] (in reverse order)
[2023-06-25 03:55:17] 2023-06-25 02:54:59,367 | WARNING  | found no corresponding commands to process id(s)
[2023-06-25 03:55:17] 2023-06-25 02:54:59,367 | INFO     | Do not look for orphan processes in BOINC jobs
[2023-06-25 03:55:17] 2023-06-25 02:54:59,368 | INFO     | ready for new job
[2023-06-25 03:55:17] 2023-06-25 02:54:59,368 | INFO     | pilot has finished with previous job - re-establishing logging
[2023-06-25 03:55:17] 2023-06-25 02:54:59,368 | INFO     | *****************************************
[2023-06-25 03:55:17] 2023-06-25 02:54:59,368 | INFO     | ***  PanDA Pilot version 3.6.0 (108)  ***
[2023-06-25 03:55:17] 2023-06-25 02:54:59,368 | INFO     | *****************************************
[2023-06-25 03:55:17] 2023-06-25 02:54:59,368 | INFO     | 
[2023-06-25 03:55:17] 2023-06-25 02:54:59,387 | INFO     | architecture information:
[2023-06-25 03:55:17] 2023-06-25 02:54:59,387 | INFO     | executing command: cat /etc/os-release
[2023-06-25 03:55:17] 2023-06-25 02:54:59,403 | INFO     | cat /etc/os-release:
[2023-06-25 03:55:17] NAME="CentOS Linux"
[2023-06-25 03:55:17] VERSION="7 (Core)"
[2023-06-25 03:55:17] ID="centos"
[2023-06-25 03:55:17] ID_LIKE="rhel fedora"
[2023-06-25 03:55:17] VERSION_ID="7"
[2023-06-25 03:55:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2023-06-25 03:55:17] ANSI_COLOR="0;31"
[2023-06-25 03:55:17] CPE_NAME="cpe:/o:centos:centos:7"
[2023-06-25 03:55:17] HOME_URL="https://www.centos.org/"
[2023-06-25 03:55:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2023-06-25 03:55:17] 
[2023-06-25 03:55:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2023-06-25 03:55:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2023-06-25 03:55:17] REDHAT_SUPPORT_PRODUCT="centos"
[2023-06-25 03:55:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2023-06-25 03:55:17] 
[2023-06-25 03:55:17] 2023-06-25 02:54:59,404 | INFO     | *****************************************
[2023-06-25 03:55:17] 2023-06-25 02:54:59,907 | INFO     | executing command: df -mP /home/m/BOINC/slots/3
[2023-06-25 03:55:17] 2023-06-25 02:54:59,925 | INFO     | sufficient remaining disk space (423360462848 B)
[2023-06-25 03:55:17] 2023-06-25 02:54:59,925 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2023-06-25 03:55:17] 2023-06-25 02:54:59,926 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2023-06-25 03:55:17] 2023-06-25 02:54:59,926 | INFO     | [job] retrieve thread has finished
[2023-06-25 03:55:17] 2023-06-25 02:54:59,926 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2023-06-25 03:55:17] 2023-06-25 02:55:00,060 | INFO     | [data] copytool_in thread has finished
[2023-06-25 03:55:17] 2023-06-25 02:55:00,165 | INFO     | [data] control thread has finished
[2023-06-25 03:55:17] 2023-06-25 02:55:00,211 | INFO     | [payload] failed_post thread has finished
[2023-06-25 03:55:17] 2023-06-25 02:55:00,249 | INFO     | [job] control thread has finished
[2023-06-25 03:55:17] 2023-06-25 02:55:00,292 | WARNING  | job monitor detected an abort_job request (signal=None)
[2023-06-25 03:55:17] 2023-06-25 02:55:00,292 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2023-06-25 03:55:17] 2023-06-25 02:55:00,292 | INFO     | will abort loop
[2023-06-25 03:55:17] 2023-06-25 02:55:00,292 | INFO     | [job] job monitor thread has finished
[2023-06-25 03:55:17] 2023-06-25 02:55:00,323 | INFO     | [job] validate thread has finished
[2023-06-25 03:55:17] 2023-06-25 02:55:00,532 | INFO     | [payload] execute_payloads thread has finished
[2023-06-25 03:55:17] 2023-06-25 02:55:00,556 | INFO     | [job] create_data_payload thread has finished
[2023-06-25 03:55:17] 2023-06-25 02:55:00,615 | INFO     | found 0 job(s) in 20 queues
[2023-06-25 03:55:17] 2023-06-25 02:55:00,615 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2023-06-25 03:55:17] 2023-06-25 02:55:00,615 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2023-06-25 03:55:17] 2023-06-25 02:55:00,927 | INFO     | [data] copytool_out thread has finished
[2023-06-25 03:55:17] 2023-06-25 02:55:01,084 | INFO     | [payload] validate_pre thread has finished
[2023-06-25 03:55:17] 2023-06-25 02:55:01,125 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2023-06-25 03:55:17] 2023-06-25 02:55:01,175 | INFO     | [payload] control thread has finished
[2023-06-25 03:55:17] 2023-06-25 02:55:01,501 | INFO     | [payload] validate_post thread has finished
[2023-06-25 03:55:17] 2023-06-25 02:55:01,953 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2023-06-25 03:55:17] 2023-06-25 02:55:01,953 | INFO     | [job] queue monitor thread has finished
[2023-06-25 03:55:17] 2023-06-25 02:55:04,126 | INFO     | [data] queue_monitor thread has finished
[2023-06-25 03:55:17] 2023-06-25 02:55:10,901 | INFO     | job.realtimelogging is not enabled
[2023-06-25 03:55:17] 2023-06-25 02:55:10,901 | INFO     | [payload] run_realtimelog thread has finished
[2023-06-25 03:55:17] 2023-06-25 02:55:11,904 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139966644201280)>', '<ExcThread(monitor, started 139965870634752)>']
[2023-06-25 03:55:17] 2023-06-25 02:55:12,675 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2023-06-25 03:55:17] 2023-06-25 02:55:12,676 | INFO     | [monitor] control thread has ended
[2023-06-25 03:55:17] 2023-06-25 02:55:16,927 | INFO     | end of generic workflow (traces error code: 0)
[2023-06-25 03:55:17] 2023-06-25 02:55:16,927 | INFO     | traces error code: 0
[2023-06-25 03:55:17] 2023-06-25 02:55:16,927 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2023-06-25 03:55:17] 2023-06-25 02:55:16,978 [wrapper] ==== pilot stdout END ====
[2023-06-25 03:55:17] 2023-06-25 02:55:16,982 [wrapper] ==== wrapper stdout RESUME ====
[2023-06-25 03:55:17] 2023-06-25 02:55:16,987 [wrapper] pilotpid: 7022
[2023-06-25 03:55:17] 2023-06-25 02:55:16,991 [wrapper] Pilot exit status: 0
[2023-06-25 03:55:17] 2023-06-25 02:55:17,004 [wrapper] pandaids: 5887770219
[2023-06-25 03:55:17] 2023-06-25 02:55:17,013 [wrapper] apfmon messages muted
[2023-06-25 03:55:17] 2023-06-25 02:55:17,018 [wrapper] Test setup, not cleaning
[2023-06-25 03:55:17] 2023-06-25 02:55:17,022 [wrapper] ==== wrapper stdout END ====
[2023-06-25 03:55:17] 2023-06-25 02:55:17,027 [wrapper] ==== wrapper stderr END ====
[2023-06-25 03:55:17] 2023-06-25 02:55:17,037 [wrapper] wrapperexiting ec=0, duration=1948
[2023-06-25 03:55:17] 2023-06-25 02:55:17,042 [wrapper] apfmon messages muted
[2023-06-25 03:55:17]  *** Error codes and diagnostics ***
[2023-06-25 03:55:17]     "exeErrorCode": 0,
[2023-06-25 03:55:17]     "exeErrorDiag": "",
[2023-06-25 03:55:17]     "pilotErrorCode": 0,
[2023-06-25 03:55:17]     "pilotErrorDiag": "",
[2023-06-25 03:55:17]  *** Listing of results directory ***
[2023-06-25 03:55:17] total 47004
[2023-06-25 03:55:17] -rw-r--r-- 1 m m   410584 Jun 25 02:32 pilot3.tar.gz
[2023-06-25 03:55:17] -rw-r--r-- 1 m m     4388 Jun 25 03:19 queuedata.json
[2023-06-25 03:55:17] -rwx------ 1 m m    27012 Jun 25 03:20 runpilot2-wrapper.sh
[2023-06-25 03:55:17] -rw-rw-r-- 1 m m      107 Jun 25 03:22 wrapper_26015_x86_64-pc-linux-gnu
[2023-06-25 03:55:17] -rwxr-xr-x 1 m m     7986 Jun 25 03:22 run_atlas
[2023-06-25 03:55:17] -rw-rw-r-- 1 m m      112 Jun 25 03:22 job.xml
[2023-06-25 03:55:17] -rw-r--r-- 2 m m    17604 Jun 25 03:22 start_atlas.sh
[2023-06-25 03:55:17] drwxrwx--x 2 m m     4096 Jun 25 03:22 shared
[2023-06-25 03:55:17] -rw-r--r-- 2 m m   421930 Jun 25 03:22 input.tar.gz
[2023-06-25 03:55:17] -rw-rw-r-- 1 m m     5728 Jun 25 03:22 init_data.xml
[2023-06-25 03:55:17] -rw-r--r-- 2 m m 37595586 Jun 25 03:22 EVNT.04972714._000034.pool.root.1
[2023-06-25 03:55:17] -rw-rw-r-- 1 m m        0 Jun 25 03:22 boinc_lockfile
[2023-06-25 03:55:17] -rw-rw-r-- 1 m m     2681 Jun 25 03:22 pandaJob.out
[2023-06-25 03:55:17] -rw------- 1 m m      424 Jun 25 03:22 setup.sh.local
[2023-06-25 03:55:17] -rw------- 1 m m  1393705 Jun 25 03:24 cric_ddmendpoints.json
[2023-06-25 03:55:17] -rw------- 1 m m  1015721 Jun 25 03:24 agis_schedconf.cvmfs.json
[2023-06-25 03:55:17] drwx------ 4 m m     4096 Jun 25 03:25 pilot3
[2023-06-25 03:55:17] -rw------- 1 m m  3109322 Jun 25 03:47 output.1.e586872c-9c34-4aac-b247-1f4f8ee98eaf_29458.pool.root
[2023-06-25 03:55:17] -rw------- 1 m m     1025 Jun 25 03:47 memory_monitor_summary.json
[2023-06-25 03:55:17] -rw-rw-r-- 1 m m      533 Jun 25 03:47 boinc_task_state.xml
[2023-06-25 03:55:17] -rw------- 1 m m   182104 Jun 25 03:50 e586872c-9c34-4aac-b247-1f4f8ee98eaf_29458.1.job.log.tgz
[2023-06-25 03:55:17] -rw------- 1 m m     7093 Jun 25 03:54 heartbeat.json
[2023-06-25 03:55:17] -rw------- 1 m m     4080 Jun 25 03:55 pilotlog.txt
[2023-06-25 03:55:17] -rw-rw-r-- 1 m m     8192 Jun 25 03:55 boinc_mmap_file
[2023-06-25 03:55:17] -rw-rw-r-- 1 m m       25 Jun 25 03:55 wrapper_checkpoint.txt
[2023-06-25 03:55:17] -rw------- 1 m m   245307 Jun 25 03:55 e586872c-9c34-4aac-b247-1f4f8ee98eaf_29458.1.job.log
[2023-06-25 03:55:17] -rw------- 1 m m      464 Jun 25 03:55 output.list
[2023-06-25 03:55:17] -rw-rw-r-- 1 m m      748 Jun 25 03:55 runtime_log
[2023-06-25 03:55:17] -rw------- 1 m m  3553280 Jun 25 03:55 result.tar.gz
[2023-06-25 03:55:17] -rw-rw-r-- 1 m m    11905 Jun 25 03:55 runtime_log.err
[2023-06-25 03:55:17] -rw------- 1 m m      626 Jun 25 03:55 F0aMDm1XUX3n7Olcko1bjSoqABFKDmABFKDm7AsVDm46LKDmYAIF0n.diag
[2023-06-25 03:55:17] -rw-rw-r-- 1 m m    22583 Jun 25 03:55 stderr.txt
[2023-06-25 03:55:17] HITS file was successfully produced:
[2023-06-25 03:55:17] -rw------- 1 m m 3109322 Jun 25 03:47 shared/HITS.pool.root.1
[2023-06-25 03:55:17]  *** Contents of shared directory: ***
[2023-06-25 03:55:17] total 43664
[2023-06-25 03:55:17] -rw-r--r-- 2 m m    17604 Jun 25 03:22 start_atlas.sh
[2023-06-25 03:55:17] -rw-r--r-- 2 m m   421930 Jun 25 03:22 input.tar.gz
[2023-06-25 03:55:17] -rw-r--r-- 2 m m 37595586 Jun 25 03:22 ATLAS.root_0
[2023-06-25 03:55:17] -rw------- 1 m m  3109322 Jun 25 03:47 HITS.pool.root.1
[2023-06-25 03:55:17] -rw------- 1 m m  3553280 Jun 25 03:55 result.tar.gz
03:55:18 (3255): run_atlas exited; CPU time 257.249463
03:55:18 (3255): called boinc_finish(0)

</stderr_txt>
]]>


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