| Name | a48NDm2OqX3n7Olcko1bjSoqABFKDmABFKDm7AsVDm3AMKDmL08sam_0 |
| Workunit | 2314582 |
| Created | 26 Jun 2023, 1:41:01 UTC |
| Sent | 26 Jun 2023, 1:46:22 UTC |
| Report deadline | 3 Jul 2023, 1:46:22 UTC |
| Received | 26 Jun 2023, 2:07:32 UTC |
| Server state | Over |
| Outcome | Success |
| Client state | Done |
| Exit status | 0 (0x00000000) |
| Computer ID | 1498 |
| Run time | 18 min 28 sec |
| CPU time | 3 min 0 sec |
| Validate state | Valid |
| Credit | 13.36 |
| Device peak FLOPS | 13.02 GFLOPS |
| Application version | ATLAS Simulation v3.01 (native_mt) x86_64-pc-linux-gnu |
| Peak working set size | 2.59 GB |
| Peak swap size | 3.09 GB |
| Peak disk usage | 81.07 MB |
Stderr output
<core_client_version>7.4.25</core_client_version>
<![CDATA[
<stderr_txt>
02:47:35 (3157): wrapper (7.7.26015): starting
02:47:35 (3157): wrapper: running run_atlas (--nthreads 4)
[2023-06-26 02:47:35] Arguments: --nthreads 4
[2023-06-26 02:47:35] Threads: 4
[2023-06-26 02:47:35] Checking for CVMFS
[2023-06-26 02:47:42] Probing /cvmfs/atlas.cern.ch... OK
[2023-06-26 02:47:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2023-06-26 02:47:54] Running cvmfs_config stat atlas.cern.ch
[2023-06-26 02:47:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2023-06-26 02:47:55] 2.9.0.0 3380 0 24644 120575 3 1 3410508 4194305 0 130560 0 0 0.000 828 484 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.100.152:3128 1
[2023-06-26 02:47:55] CVMFS is ok
[2023-06-26 02:47:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2023-06-26 02:47:55] Checking for apptainer binary...
[2023-06-26 02:47:55] Using apptainer found in PATH at /usr/bin/apptainer
[2023-06-26 02:47:55] Running /usr/bin/apptainer --version
[2023-06-26 02:47:55] apptainer version 1.0.3
[2023-06-26 02:47:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2023-06-26 02:47:56] TeeC16
[2023-06-26 02:47:56] apptainer works
[2023-06-26 02:47:56] Set ATHENA_PROC_NUMBER=4
[2023-06-26 02:47:56] Set ATHENA_CORE_NUMBER=4
[2023-06-26 02:47:56] Starting ATLAS job with PandaID=5888625114
[2023-06-26 02:47:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/m/BOINC/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2023-06-26 03:06:00] *** The last 200 lines of the pilot log: ***
[2023-06-26 03:06:00] 2023-06-26 02:05:03,037 | INFO | number of running child processes to parent process 13468: 1
[2023-06-26 03:06:00] 2023-06-26 02:05:03,037 | INFO | maximum number of monitored processes: 5
[2023-06-26 03:06:00] 2023-06-26 02:05:05,540 | INFO | monitor loop #181: job 0:5888625114 is in state 'stageout'
[2023-06-26 03:06:00] 2023-06-26 02:05:05,578 | INFO | number of running child processes to parent process 13468: 1
[2023-06-26 03:06:00] 2023-06-26 02:05:05,578 | INFO | maximum number of monitored processes: 5
[2023-06-26 03:06:00] 2023-06-26 02:05:08,081 | INFO | monitor loop #182: job 0:5888625114 is in state 'stageout'
[2023-06-26 03:06:00] 2023-06-26 02:05:08,122 | INFO | number of running child processes to parent process 13468: 1
[2023-06-26 03:06:00] 2023-06-26 02:05:08,123 | INFO | maximum number of monitored processes: 5
[2023-06-26 03:06:00] 2023-06-26 02:05:10,626 | INFO | monitor loop #183: job 0:5888625114 is in state 'stageout'
[2023-06-26 03:06:00] 2023-06-26 02:05:10,662 | INFO | number of running child processes to parent process 13468: 1
[2023-06-26 03:06:00] 2023-06-26 02:05:10,662 | INFO | maximum number of monitored processes: 5
[2023-06-26 03:06:00] 2023-06-26 02:05:13,165 | INFO | monitor loop #184: job 0:5888625114 is in state 'stageout'
[2023-06-26 03:06:00] 2023-06-26 02:05:13,208 | INFO | number of running child processes to parent process 13468: 1
[2023-06-26 03:06:00] 2023-06-26 02:05:13,208 | INFO | maximum number of monitored processes: 5
[2023-06-26 03:06:00] 2023-06-26 02:05:15,711 | INFO | monitor loop #185: job 0:5888625114 is in state 'stageout'
[2023-06-26 03:06:00] 2023-06-26 02:05:15,751 | INFO | number of running child processes to parent process 13468: 1
[2023-06-26 03:06:00] 2023-06-26 02:05:15,751 | INFO | maximum number of monitored processes: 5
[2023-06-26 03:06:00] 2023-06-26 02:05:18,254 | INFO | monitor loop #186: job 0:5888625114 is in state 'stageout'
[2023-06-26 03:06:00] 2023-06-26 02:05:18,290 | INFO | number of running child processes to parent process 13468: 1
[2023-06-26 03:06:00] 2023-06-26 02:05:18,291 | INFO | maximum number of monitored processes: 5
[2023-06-26 03:06:00] 2023-06-26 02:05:19,258 | INFO | [attempt=3/3] loading data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json
[2023-06-26 03:06:00] 2023-06-26 02:05:20,129 | WARNING | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed:
[2023-06-26 03:06:00] 2023-06-26 02:05:20,129 | WARNING | cache file=/home/m/BOINC/slots/3/agis_ddmendpoints.agis.ALL.json is not available: [Errno 2] No such file or directory: '/home/m/BOINC/slots/3/agis_ddmendpoints.ag
[2023-06-26 03:06:00] 2023-06-26 02:05:20,175 | INFO | transferring file ce08aae9-4e91-4963-84a5-8bcb9a1120aa_21269.1.job.log.tgz from /home/m/BOINC/slots/3/PanDA_Pilot-5888625114/ce08aae9-4e91-4963-84a5-8bcb9a1120aa_2
[2023-06-26 03:06:00] 2023-06-26 02:05:20,175 | INFO | executing command: /usr/bin/env mv /home/m/BOINC/slots/3/PanDA_Pilot-5888625114/ce08aae9-4e91-4963-84a5-8bcb9a1120aa_21269.1.job.log.tgz /home/m/BOINC/slots/3/ce08
[2023-06-26 03:06:00] 2023-06-26 02:05:20,192 | INFO | Adding to output.list: ce08aae9-4e91-4963-84a5-8bcb9a1120aa_21269.1.job.log.tgz davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/af/ef/ce08aae9-4e91-
[2023-06-26 03:06:00] 2023-06-26 02:05:20,193 | INFO | executing command: ps aux -q 6924
[2023-06-26 03:06:00] 2023-06-26 02:05:20,216 | INFO | summary of transferred files:
[2023-06-26 03:06:00] 2023-06-26 02:05:20,216 | INFO | -- lfn=ce08aae9-4e91-4963-84a5-8bcb9a1120aa_21269.1.job.log.tgz, status_code=0, status=transferred
[2023-06-26 03:06:00] 2023-06-26 02:05:20,216 | INFO | stage-out finished correctly
[2023-06-26 03:06:00] 2023-06-26 02:05:20,794 | INFO | monitor loop #187: job 0:5888625114 is in state 'finished'
[2023-06-26 03:06:00] 2023-06-26 02:05:20,794 | INFO | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-06-26 03:06:00] 2023-06-26 02:05:20,902 | INFO | finished stage-out for finished payload, adding job to finished_jobs queue
[2023-06-26 03:06:00] 2023-06-26 02:05:22,942 | INFO | job 5888625114 has state=finished
[2023-06-26 03:06:00] 2023-06-26 02:05:22,942 | INFO | preparing for final server update for job 5888625114 in state='finished'
[2023-06-26 03:06:00] 2023-06-26 02:05:22,943 | INFO | this job has now completed (state=finished)
[2023-06-26 03:06:00] 2023-06-26 02:05:22,943 | INFO | pilot will not update the server (heartbeat message will be written to file)
[2023-06-26 03:06:00] 2023-06-26 02:05:22,943 | INFO | job 5888625114 has finished - writing final server update
[2023-06-26 03:06:00] 2023-06-26 02:05:22,944 | WARNING | wrong length of table data, x=[1687744343.0, 1687744404.0, 1687744465.0, 1687744526.0, 1687744587.0, 1687744648.0, 1687744709.0], y=[2336.0, 774342.0, 830303.0, 94
[2023-06-26 03:06:00] 2023-06-26 02:05:22,945 | INFO | total number of processed events: 2 (read)
[2023-06-26 03:06:00] 2023-06-26 02:05:22,964 | INFO | executing command: lscpu
[2023-06-26 03:06:00] 2023-06-26 02:05:22,985 | INFO | found 2 cores (2 cores per socket, 1 sockets)
[2023-06-26 03:06:00] 2023-06-26 02:05:22,985 | INFO | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2023-06-26 03:06:00] 2023-06-26 02:05:23,012 | INFO | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2023-06-26 03:06:00] 2023-06-26 02:05:23,297 | INFO | monitor loop #188: job 0:5888625114 is in state 'finished'
[2023-06-26 03:06:00] 2023-06-26 02:05:23,297 | INFO | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-06-26 03:06:00] 2023-06-26 02:05:25,800 | INFO | monitor loop #189: job 0:5888625114 is in state 'finished'
[2023-06-26 03:06:00] 2023-06-26 02:05:25,801 | INFO | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-06-26 03:06:00] 2023-06-26 02:05:28,304 | INFO | monitor loop #190: job 0:5888625114 is in state 'finished'
[2023-06-26 03:06:00] 2023-06-26 02:05:28,304 | INFO | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-06-26 03:06:00] 2023-06-26 02:05:30,807 | INFO | monitor loop #191: job 0:5888625114 is in state 'finished'
[2023-06-26 03:06:00] 2023-06-26 02:05:30,808 | INFO | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-06-26 03:06:00] 2023-06-26 02:05:33,311 | INFO | monitor loop #192: job 0:5888625114 is in state 'finished'
[2023-06-26 03:06:00] 2023-06-26 02:05:33,311 | INFO | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-06-26 03:06:00] 2023-06-26 02:05:35,814 | INFO | monitor loop #193: job 0:5888625114 is in state 'finished'
[2023-06-26 03:06:00] 2023-06-26 02:05:35,814 | INFO | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-06-26 03:06:00] 2023-06-26 02:05:38,318 | INFO | monitor loop #194: job 0:5888625114 is in state 'finished'
[2023-06-26 03:06:00] 2023-06-26 02:05:38,318 | INFO | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-06-26 03:06:00] 2023-06-26 02:05:40,819 | INFO | monitor loop #195: job 0:5888625114 is in state 'finished'
[2023-06-26 03:06:00] 2023-06-26 02:05:40,820 | INFO | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-06-26 03:06:00] 2023-06-26 02:05:41,347 | INFO | executing command: python3 /home/m/BOINC/slots/3/pilot3/pilot/scripts/cpu_arch.py --alg gcc
[2023-06-26 03:06:00] 2023-06-26 02:05:41,445 | INFO | using path: /home/m/BOINC/slots/3/PanDA_Pilot-5888625114/memory_monitor_summary.json (trf name=prmon)
[2023-06-26 03:06:00] 2023-06-26 02:05:41,446 | INFO | extracted standard info from prmon json
[2023-06-26 03:06:00] 2023-06-26 02:05:41,446 | INFO | extracted standard memory fields from prmon json
[2023-06-26 03:06:00] 2023-06-26 02:05:41,446 | INFO | ..............................
[2023-06-26 03:06:00] 2023-06-26 02:05:41,446 | INFO | . Timing measurements:
[2023-06-26 03:06:00] 2023-06-26 02:05:41,446 | INFO | . get job = 31 s
[2023-06-26 03:06:00] 2023-06-26 02:05:41,446 | INFO | . initial setup = 70 s
[2023-06-26 03:06:00] 2023-06-26 02:05:41,446 | INFO | . payload setup = 8 s
[2023-06-26 03:06:00] 2023-06-26 02:05:41,446 | INFO | . stage-in = 68 s
[2023-06-26 03:06:00] 2023-06-26 02:05:41,446 | INFO | . payload execution = 394 s
[2023-06-26 03:06:00] 2023-06-26 02:05:41,446 | INFO | . stage-out = 384 s
[2023-06-26 03:06:00] 2023-06-26 02:05:41,446 | INFO | ..............................
[2023-06-26 03:06:00] 2023-06-26 02:05:41,508 | INFO |
[2023-06-26 03:06:00] 2023-06-26 02:05:41,509 | INFO | job summary report
[2023-06-26 03:06:00] 2023-06-26 02:05:41,509 | INFO | --------------------------------------------------
[2023-06-26 03:06:00] 2023-06-26 02:05:41,509 | INFO | PanDA job id: 5888625114
[2023-06-26 03:06:00] 2023-06-26 02:05:41,509 | INFO | task id: NULL
[2023-06-26 03:06:00] 2023-06-26 02:05:41,509 | INFO | errors: (none)
[2023-06-26 03:06:00] 2023-06-26 02:05:41,509 | INFO | status: LOG_TRANSFER = DONE
[2023-06-26 03:06:00] 2023-06-26 02:05:41,509 | INFO | pilot state: finished
[2023-06-26 03:06:00] 2023-06-26 02:05:41,509 | INFO | transexitcode: 0
[2023-06-26 03:06:00] 2023-06-26 02:05:41,509 | INFO | exeerrorcode: 0
[2023-06-26 03:06:00] 2023-06-26 02:05:41,510 | INFO | exeerrordiag:
[2023-06-26 03:06:00] 2023-06-26 02:05:41,510 | INFO | exitcode: 0
[2023-06-26 03:06:00] 2023-06-26 02:05:41,510 | INFO | exitmsg: OK
[2023-06-26 03:06:00] 2023-06-26 02:05:41,510 | INFO | cpuconsumptiontime: 183 s
[2023-06-26 03:06:00] 2023-06-26 02:05:41,510 | INFO | nevents: 2
[2023-06-26 03:06:00] 2023-06-26 02:05:41,510 | INFO | neventsw: 0
[2023-06-26 03:06:00] 2023-06-26 02:05:41,510 | INFO | pid: 13468
[2023-06-26 03:06:00] 2023-06-26 02:05:41,510 | INFO | pgrp: 13468
[2023-06-26 03:06:00] 2023-06-26 02:05:41,510 | INFO | corecount: 4
[2023-06-26 03:06:00] 2023-06-26 02:05:41,510 | INFO | event service: False
[2023-06-26 03:06:00] 2023-06-26 02:05:41,510 | INFO | sizes: {0: 2490360, 1: 2490559, 11: 2490705, 22: 2490733, 32: 2490761, 43: 2490789, 54: 2490945, 64: 2490973, 74: 2491089, 75: 2491117, 406: 2512684, 791: 2521992,
[2023-06-26 03:06:00] 2023-06-26 02:05:41,511 | INFO | --------------------------------------------------
[2023-06-26 03:06:00] 2023-06-26 02:05:41,511 | INFO |
[2023-06-26 03:06:00] 2023-06-26 02:05:41,511 | INFO | executing command: ls -lF /home/m/BOINC/slots/3
[2023-06-26 03:06:00] 2023-06-26 02:05:41,530 | INFO | queue jobs had 0 job(s) [purged]
[2023-06-26 03:06:00] 2023-06-26 02:05:41,530 | INFO | queue payloads had 0 job(s) [purged]
[2023-06-26 03:06:00] 2023-06-26 02:05:41,530 | INFO | queue data_in had 0 job(s) [purged]
[2023-06-26 03:06:00] 2023-06-26 02:05:41,530 | INFO | queue data_out had 0 job(s) [purged]
[2023-06-26 03:06:00] 2023-06-26 02:05:41,530 | INFO | queue current_data_in had 0 job(s) [purged]
[2023-06-26 03:06:00] 2023-06-26 02:05:41,530 | INFO | queue validated_jobs had 0 job(s) [purged]
[2023-06-26 03:06:00] 2023-06-26 02:05:41,531 | INFO | queue validated_payloads had 0 job(s) [purged]
[2023-06-26 03:06:00] 2023-06-26 02:05:41,531 | INFO | queue monitored_payloads had 0 job(s) [purged]
[2023-06-26 03:06:00] 2023-06-26 02:05:41,531 | INFO | queue finished_jobs had 0 job(s) [purged]
[2023-06-26 03:06:00] 2023-06-26 02:05:41,531 | INFO | queue finished_payloads had 0 job(s) [purged]
[2023-06-26 03:06:00] 2023-06-26 02:05:41,531 | INFO | queue finished_data_in had 1 job(s) [purged]
[2023-06-26 03:06:00] 2023-06-26 02:05:41,531 | INFO | queue finished_data_out had 0 job(s) [purged]
[2023-06-26 03:06:00] 2023-06-26 02:05:41,531 | INFO | queue failed_jobs had 0 job(s) [purged]
[2023-06-26 03:06:00] 2023-06-26 02:05:41,532 | INFO | queue failed_payloads had 0 job(s) [purged]
[2023-06-26 03:06:00] 2023-06-26 02:05:41,532 | INFO | queue failed_data_in had 0 job(s) [purged]
[2023-06-26 03:06:00] 2023-06-26 02:05:41,532 | INFO | queue failed_data_out had 0 job(s) [purged]
[2023-06-26 03:06:00] 2023-06-26 02:05:41,532 | INFO | queue completed_jobs had 0 job(s) [purged]
[2023-06-26 03:06:00] 2023-06-26 02:05:41,532 | INFO | queue completed_jobids has 1 job(s)
[2023-06-26 03:06:00] 2023-06-26 02:05:41,532 | INFO | queue realtimelog_payloads had 0 job(s) [purged]
[2023-06-26 03:06:00] 2023-06-26 02:05:41,532 | INFO | queue messages had 0 job(s) [purged]
[2023-06-26 03:06:00] 2023-06-26 02:05:41,532 | INFO | job 5888625114 has completed (purged errors)
[2023-06-26 03:06:00] 2023-06-26 02:05:41,533 | INFO | overall cleanup function is called
[2023-06-26 03:06:00] 2023-06-26 02:05:42,540 | INFO | --- collectZombieJob: --- 10, [13468]
[2023-06-26 03:06:00] 2023-06-26 02:05:42,540 | INFO | zombie collector trying to kill pid 13468
[2023-06-26 03:06:00] 2023-06-26 02:05:42,540 | INFO | harmless exception when collecting zombies: [Errno 10] No child processes
[2023-06-26 03:06:00] 2023-06-26 02:05:43,545 | INFO | collected zombie processes
[2023-06-26 03:06:00] 2023-06-26 02:05:43,546 | INFO | will now attempt to kill all subprocesses of pid=13468
[2023-06-26 03:06:00] 2023-06-26 02:05:43,590 | INFO | process IDs to be killed: [13468] (in reverse order)
[2023-06-26 03:06:00] 2023-06-26 02:05:43,624 | WARNING | found no corresponding commands to process id(s)
[2023-06-26 03:06:00] 2023-06-26 02:05:43,624 | INFO | Do not look for orphan processes in BOINC jobs
[2023-06-26 03:06:00] 2023-06-26 02:05:43,625 | INFO | ready for new job
[2023-06-26 03:06:00] 2023-06-26 02:05:43,625 | INFO | pilot has finished with previous job - re-establishing logging
[2023-06-26 03:06:00] 2023-06-26 02:05:43,625 | INFO | *****************************************
[2023-06-26 03:06:00] 2023-06-26 02:05:43,625 | INFO | *** PanDA Pilot version 3.6.0 (108) ***
[2023-06-26 03:06:00] 2023-06-26 02:05:43,625 | INFO | *****************************************
[2023-06-26 03:06:00] 2023-06-26 02:05:43,626 | INFO |
[2023-06-26 03:06:00] 2023-06-26 02:05:43,643 | INFO | architecture information:
[2023-06-26 03:06:00] 2023-06-26 02:05:43,644 | INFO | executing command: cat /etc/os-release
[2023-06-26 03:06:00] 2023-06-26 02:05:43,661 | INFO | cat /etc/os-release:
[2023-06-26 03:06:00] NAME="CentOS Linux"
[2023-06-26 03:06:00] VERSION="7 (Core)"
[2023-06-26 03:06:00] ID="centos"
[2023-06-26 03:06:00] ID_LIKE="rhel fedora"
[2023-06-26 03:06:00] VERSION_ID="7"
[2023-06-26 03:06:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2023-06-26 03:06:00] ANSI_COLOR="0;31"
[2023-06-26 03:06:00] CPE_NAME="cpe:/o:centos:centos:7"
[2023-06-26 03:06:00] HOME_URL="https://www.centos.org/"
[2023-06-26 03:06:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2023-06-26 03:06:00]
[2023-06-26 03:06:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2023-06-26 03:06:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2023-06-26 03:06:00] REDHAT_SUPPORT_PRODUCT="centos"
[2023-06-26 03:06:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2023-06-26 03:06:00]
[2023-06-26 03:06:00] 2023-06-26 02:05:43,661 | INFO | *****************************************
[2023-06-26 03:06:00] 2023-06-26 02:05:44,164 | INFO | executing command: df -mP /home/m/BOINC/slots/3
[2023-06-26 03:06:00] 2023-06-26 02:05:44,183 | INFO | sufficient remaining disk space (423313276928 B)
[2023-06-26 03:06:00] 2023-06-26 02:05:44,183 | WARNING | since timefloor is set to 0, pilot was only allowed to run one job
[2023-06-26 03:06:00] 2023-06-26 02:05:44,183 | WARNING | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2023-06-26 03:06:00] 2023-06-26 02:05:44,184 | INFO | [job] retrieve thread has finished
[2023-06-26 03:06:00] 2023-06-26 02:05:44,184 | WARNING | data:copytool_out:received graceful stop - abort after this iteration
[2023-06-26 03:06:00] 2023-06-26 02:05:44,184 | WARNING | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2023-06-26 03:06:00] 2023-06-26 02:05:44,185 | INFO | found 0 job(s) in 20 queues
[2023-06-26 03:06:00] 2023-06-26 02:05:44,185 | WARNING | pilot monitor received instruction that args.graceful_stop has been set
[2023-06-26 03:06:00] 2023-06-26 02:05:44,185 | WARNING | will wait for a maximum of 300 s for threads to finish
[2023-06-26 03:06:00] 2023-06-26 02:05:44,203 | INFO | [payload] validate_post thread has finished
[2023-06-26 03:06:00] 2023-06-26 02:05:44,328 | WARNING | job:job_monitor:received graceful stop - abort after this iteration
[2023-06-26 03:06:00] 2023-06-26 02:05:44,328 | INFO | aborting loop
[2023-06-26 03:06:00] 2023-06-26 02:05:44,328 | INFO | [job] job monitor thread has finished
[2023-06-26 03:06:00] 2023-06-26 02:05:44,340 | INFO | [payload] failed_post thread has finished
[2023-06-26 03:06:00] 2023-06-26 02:05:44,345 | INFO | [job] create_data_payload thread has finished
[2023-06-26 03:06:00] 2023-06-26 02:05:44,467 | INFO | [data] control thread has finished
[2023-06-26 03:06:00] 2023-06-26 02:05:44,504 | INFO | [payload] validate_pre thread has finished
[2023-06-26 03:06:00] 2023-06-26 02:05:44,669 | INFO | [job] control thread has finished
[2023-06-26 03:06:00] 2023-06-26 02:05:44,987 | WARNING | data:queue_monitoring:received graceful stop - abort after this iteration
[2023-06-26 03:06:00] 2023-06-26 02:05:45,185 | INFO | [data] copytool_out thread has finished
[2023-06-26 03:06:00] 2023-06-26 02:05:45,206 | INFO | [payload] control thread has finished
[2023-06-26 03:06:00] 2023-06-26 02:05:45,320 | INFO | [data] copytool_in thread has finished
[2023-06-26 03:06:00] 2023-06-26 02:05:45,536 | INFO | [payload] execute_payloads thread has finished
[2023-06-26 03:06:00] 2023-06-26 02:05:45,664 | INFO | [job] validate thread has finished
[2023-06-26 03:06:00] 2023-06-26 02:05:46,519 | WARNING | job:queue_monitor:received graceful stop - abort after this iteration
[2023-06-26 03:06:00] 2023-06-26 02:05:46,519 | INFO | [job] queue monitor thread has finished
[2023-06-26 03:06:00] 2023-06-26 02:05:47,988 | INFO | [data] queue_monitor thread has finished
[2023-06-26 03:06:00] 2023-06-26 02:05:54,684 | INFO | job.realtimelogging is not enabled
[2023-06-26 03:06:00] 2023-06-26 02:05:54,684 | INFO | [payload] run_realtimelog thread has finished
[2023-06-26 03:06:00] 2023-06-26 02:05:55,399 | INFO | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140475949655872)>', '<ExcThread(monitor, started 140475528886016)>']
[2023-06-26 03:06:00] 2023-06-26 02:05:56,246 | WARNING | job_aborted has been set - aborting pilot monitoring
[2023-06-26 03:06:00] 2023-06-26 02:05:56,246 | INFO | [monitor] control thread has ended
[2023-06-26 03:06:00] 2023-06-26 02:06:00,425 | INFO | end of generic workflow (traces error code: 0)
[2023-06-26 03:06:00] 2023-06-26 02:06:00,426 | INFO | traces error code: 0
[2023-06-26 03:06:00] 2023-06-26 02:06:00,426 | INFO | pilot has finished (exit code=0, shell exit code=0)
[2023-06-26 03:06:00] 2023-06-26 02:06:00,471 [wrapper] ==== pilot stdout END ====
[2023-06-26 03:06:00] 2023-06-26 02:06:00,475 [wrapper] ==== wrapper stdout RESUME ====
[2023-06-26 03:06:00] 2023-06-26 02:06:00,480 [wrapper] pilotpid: 6924
[2023-06-26 03:06:00] 2023-06-26 02:06:00,484 [wrapper] Pilot exit status: 0
[2023-06-26 03:06:00] 2023-06-26 02:06:00,495 [wrapper] pandaids: 5888625114
[2023-06-26 03:06:00] 2023-06-26 02:06:00,502 [wrapper] apfmon messages muted
[2023-06-26 03:06:00] 2023-06-26 02:06:00,506 [wrapper] Test setup, not cleaning
[2023-06-26 03:06:00] 2023-06-26 02:06:00,510 [wrapper] ==== wrapper stdout END ====
[2023-06-26 03:06:00] 2023-06-26 02:06:00,514 [wrapper] ==== wrapper stderr END ====
[2023-06-26 03:06:00] 2023-06-26 02:06:00,521 [wrapper] wrapperexiting ec=0, duration=1083
[2023-06-26 03:06:00] 2023-06-26 02:06:00,525 [wrapper] apfmon messages muted
[2023-06-26 03:06:00] *** Error codes and diagnostics ***
[2023-06-26 03:06:00] "exeErrorCode": 0,
[2023-06-26 03:06:00] "exeErrorDiag": "",
[2023-06-26 03:06:00] "pilotErrorCode": 0,
[2023-06-26 03:06:00] "pilotErrorDiag": "",
[2023-06-26 03:06:00] *** Listing of results directory ***
[2023-06-26 03:06:00] total 43536
[2023-06-26 03:06:00] -rw-r--r-- 1 m m 410584 Jun 26 02:35 pilot3.tar.gz
[2023-06-26 03:06:00] -rwx------ 1 m m 27012 Jun 26 02:40 runpilot2-wrapper.sh
[2023-06-26 03:06:00] -rw-r--r-- 1 m m 4388 Jun 26 02:40 queuedata.json
[2023-06-26 03:06:00] -rw-rw-r-- 1 m m 107 Jun 26 02:47 wrapper_26015_x86_64-pc-linux-gnu
[2023-06-26 03:06:00] -rwxr-xr-x 1 m m 7986 Jun 26 02:47 run_atlas
[2023-06-26 03:06:00] -rw-rw-r-- 1 m m 112 Jun 26 02:47 job.xml
[2023-06-26 03:06:00] -rw-rw-r-- 1 m m 5728 Jun 26 02:47 init_data.xml
[2023-06-26 03:06:00] -rw-r--r-- 2 m m 37960264 Jun 26 02:47 EVNT.04972714._000040.pool.root.1
[2023-06-26 03:06:00] -rw-r--r-- 2 m m 17604 Jun 26 02:47 start_atlas.sh
[2023-06-26 03:06:00] drwxrwx--x 2 m m 4096 Jun 26 02:47 shared
[2023-06-26 03:06:00] -rw-r--r-- 2 m m 421923 Jun 26 02:47 input.tar.gz
[2023-06-26 03:06:00] -rw-rw-r-- 1 m m 0 Jun 26 02:47 boinc_lockfile
[2023-06-26 03:06:00] -rw-rw-r-- 1 m m 2681 Jun 26 02:47 pandaJob.out
[2023-06-26 03:06:00] -rw------- 1 m m 424 Jun 26 02:47 setup.sh.local
[2023-06-26 03:06:00] -rw------- 1 m m 1393705 Jun 26 02:50 cric_ddmendpoints.json
[2023-06-26 03:06:00] -rw------- 1 m m 1013482 Jun 26 02:50 agis_schedconf.cvmfs.json
[2023-06-26 03:06:00] drwx------ 4 m m 4096 Jun 26 02:50 pilot3
[2023-06-26 03:06:00] -rw-rw-r-- 1 m m 532 Jun 26 02:58 boinc_task_state.xml
[2023-06-26 03:06:00] -rw------- 1 m m 1238573 Jun 26 02:58 output.1.ce08aae9-4e91-4963-84a5-8bcb9a1120aa_21269.pool.root
[2023-06-26 03:06:00] -rw------- 1 m m 1017 Jun 26 02:58 memory_monitor_summary.json
[2023-06-26 03:06:00] -rw------- 1 m m 175077 Jun 26 03:02 ce08aae9-4e91-4963-84a5-8bcb9a1120aa_21269.1.job.log.tgz
[2023-06-26 03:06:00] -rw------- 1 m m 7068 Jun 26 03:05 heartbeat.json
[2023-06-26 03:06:00] -rw-rw-r-- 1 m m 25 Jun 26 03:05 wrapper_checkpoint.txt
[2023-06-26 03:06:00] -rw-rw-r-- 1 m m 8192 Jun 26 03:05 boinc_mmap_file
[2023-06-26 03:06:00] -rw------- 1 m m 4108 Jun 26 03:06 pilotlog.txt
[2023-06-26 03:06:00] -rw------- 1 m m 163422 Jun 26 03:06 ce08aae9-4e91-4963-84a5-8bcb9a1120aa_21269.1.job.log
[2023-06-26 03:06:00] -rw------- 1 m m 464 Jun 26 03:06 output.list
[2023-06-26 03:06:00] -rw-rw-r-- 1 m m 748 Jun 26 03:06 runtime_log
[2023-06-26 03:06:00] -rw------- 1 m m 1597440 Jun 26 03:06 result.tar.gz
[2023-06-26 03:06:00] -rw-rw-r-- 1 m m 11905 Jun 26 03:06 runtime_log.err
[2023-06-26 03:06:00] -rw------- 1 m m 626 Jun 26 03:06 a48NDm2OqX3n7Olcko1bjSoqABFKDmABFKDm7AsVDm3AMKDmL08sam.diag
[2023-06-26 03:06:00] -rw-rw-r-- 1 m m 22807 Jun 26 03:06 stderr.txt
[2023-06-26 03:06:00] HITS file was successfully produced:
[2023-06-26 03:06:00] -rw------- 1 m m 1238573 Jun 26 02:58 shared/HITS.pool.root.1
[2023-06-26 03:06:00] *** Contents of shared directory: ***
[2023-06-26 03:06:00] total 40280
[2023-06-26 03:06:00] -rw-r--r-- 2 m m 37960264 Jun 26 02:47 ATLAS.root_0
[2023-06-26 03:06:00] -rw-r--r-- 2 m m 17604 Jun 26 02:47 start_atlas.sh
[2023-06-26 03:06:00] -rw-r--r-- 2 m m 421923 Jun 26 02:47 input.tar.gz
[2023-06-26 03:06:00] -rw------- 1 m m 1238573 Jun 26 02:58 HITS.pool.root.1
[2023-06-26 03:06:00] -rw------- 1 m m 1597440 Jun 26 03:06 result.tar.gz
03:06:02 (3157): run_atlas exited; CPU time 180.968176
03:06:02 (3157): called boinc_finish(0)
</stderr_txt>
]]>
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