| Name | 0CWNDm5peY3n7Olcko1bjSoqABFKDmABFKDm7AsVDmzJMKDmlGveNo_0 |
| Workunit | 2315046 |
| Created | 28 Jun 2023, 7:32:16 UTC |
| Sent | 28 Jun 2023, 7:32:33 UTC |
| Report deadline | 5 Jul 2023, 7:32:33 UTC |
| Received | 28 Jun 2023, 8:23:18 UTC |
| Server state | Over |
| Outcome | Success |
| Client state | Done |
| Exit status | 0 (0x00000000) |
| Computer ID | 4008 |
| Run time | 26 min 22 sec |
| CPU time | 6 min 1 sec |
| Validate state | Valid |
| Credit | 11.61 |
| Device peak FLOPS | 3.17 GFLOPS |
| Application version | ATLAS Simulation v3.01 (native_mt) x86_64-pc-linux-gnu |
| Peak working set size | 2.53 GB |
| Peak swap size | 3.11 GB |
| Peak disk usage | 79.62 MB |
Stderr output
<core_client_version>7.16.1</core_client_version>
<![CDATA[
<stderr_txt>
09:54:39 (3597): wrapper (7.7.26015): starting
09:54:39 (3597): wrapper: running run_atlas (--nthreads 1)
[2023-06-28 09:54:39] Arguments: --nthreads 1
[2023-06-28 09:54:39] Threads: 1
[2023-06-28 09:54:39] Checking for CVMFS
[2023-06-28 09:54:41] Probing /cvmfs/atlas.cern.ch... OK
[2023-06-28 09:54:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2023-06-28 09:54:42] Running cvmfs_config stat atlas.cern.ch
[2023-06-28 09:54:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2023-06-28 09:54:43] 2.6.3.0 3841 0 28324 120662 3 1 2608075 2816001 0 65024 0 0 n/a 828 2915 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://10.116.178.201:3128 1
[2023-06-28 09:54:43] CVMFS is ok
[2023-06-28 09:54:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2023-06-28 09:54:43] Checking for apptainer binary...
[2023-06-28 09:54:43] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2023-06-28 09:54:43] apptainer is not installed, using version from CVMFS
[2023-06-28 09:54:43] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2023-06-28 09:54:57] HPi7COS7
[2023-06-28 09:54:57] apptainer works
[2023-06-28 09:54:57] Starting ATLAS job with PandaID=5890751990
[2023-06-28 09:54:57] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2023-06-28 10:20:58] *** The last 200 lines of the pilot log: ***
[2023-06-28 10:20:58] 2023-06-28 08:20:12,428 | INFO | monitor loop #216: job 0:5890751990 is in state 'stageout'
[2023-06-28 10:20:58] 2023-06-28 08:20:12,539 | INFO | number of running child processes to parent process 13922: 1
[2023-06-28 10:20:58] 2023-06-28 08:20:12,540 | INFO | maximum number of monitored processes: 7
[2023-06-28 10:20:58] 2023-06-28 08:20:15,078 | INFO | monitor loop #217: job 0:5890751990 is in state 'stageout'
[2023-06-28 10:20:58] 2023-06-28 08:20:15,145 | INFO | number of running child processes to parent process 13922: 1
[2023-06-28 10:20:58] 2023-06-28 08:20:15,145 | INFO | maximum number of monitored processes: 7
[2023-06-28 10:20:58] 2023-06-28 08:20:17,663 | INFO | monitor loop #218: job 0:5890751990 is in state 'stageout'
[2023-06-28 10:20:58] 2023-06-28 08:20:17,663 | INFO | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 716535 B
[2023-06-28 10:20:58] 2023-06-28 08:20:17,664 | INFO | payload log (payload.stdout) within allowed size limit (2147483648 B): 8801 B
[2023-06-28 10:20:58] 2023-06-28 08:20:17,664 | INFO | executing command: df -mP /var/lib/boinc/slots/1
[2023-06-28 10:20:58] 2023-06-28 08:20:17,689 | INFO | sufficient remaining disk space (11412701184 B)
[2023-06-28 10:20:58] 2023-06-28 08:20:17,689 | INFO | work directory size check will use 61362667520 B as a max limit (10% grace limit added)
[2023-06-28 10:20:58] 2023-06-28 08:20:17,698 | INFO | size of work directory /var/lib/boinc/slots/1/PanDA_Pilot-5890751990: 1088171 B (within 61362667520 B limit)
[2023-06-28 10:20:58] 2023-06-28 08:20:17,698 | INFO | pfn file=/var/lib/boinc/slots/1/PanDA_Pilot-5890751990/output.1.93945790-7f51-4500-8e53-dde7851059de_52199.pool.root does not exist (skip from workdir size calcula
[2023-06-28 10:20:58] 2023-06-28 08:20:17,698 | INFO | total size of present files: 0 B (workdir size: 1088171 B)
[2023-06-28 10:20:58] 2023-06-28 08:20:17,698 | INFO | output file size check: skipping output file /var/lib/boinc/slots/1/PanDA_Pilot-5890751990/output.1.93945790-7f51-4500-8e53-dde7851059de_52199.pool.root since it d
[2023-06-28 10:20:58] 2023-06-28 08:20:17,809 | INFO | number of running child processes to parent process 13922: 1
[2023-06-28 10:20:58] 2023-06-28 08:20:17,810 | INFO | maximum number of monitored processes: 7
[2023-06-28 10:20:58] 2023-06-28 08:20:20,314 | INFO | monitor loop #219: job 0:5890751990 is in state 'stageout'
[2023-06-28 10:20:58] 2023-06-28 08:20:20,428 | INFO | number of running child processes to parent process 13922: 1
[2023-06-28 10:20:58] 2023-06-28 08:20:20,428 | INFO | maximum number of monitored processes: 7
[2023-06-28 10:20:58] 2023-06-28 08:20:22,960 | INFO | monitor loop #220: job 0:5890751990 is in state 'stageout'
[2023-06-28 10:20:58] 2023-06-28 08:20:22,991 | INFO | [attempt=3/3] loading data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json
[2023-06-28 10:20:58] 2023-06-28 08:20:23,018 | INFO | number of running child processes to parent process 13922: 1
[2023-06-28 10:20:58] 2023-06-28 08:20:23,018 | INFO | maximum number of monitored processes: 7
[2023-06-28 10:20:58] 2023-06-28 08:20:23,127 | WARNING | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed:
[2023-06-28 10:20:58] 2023-06-28 08:20:23,127 | WARNING | cache file=/var/lib/boinc/slots/1/agis_ddmendpoints.agis.ALL.json is not available: [Errno 2] No such file or directory: '/var/lib/boinc/slots/1/agis_ddmendpoints.
[2023-06-28 10:20:58] 2023-06-28 08:20:23,231 | INFO | transferring file 93945790-7f51-4500-8e53-dde7851059de_52199.1.job.log.tgz from /var/lib/boinc/slots/1/PanDA_Pilot-5890751990/93945790-7f51-4500-8e53-dde7851059de_
[2023-06-28 10:20:58] 2023-06-28 08:20:23,231 | INFO | executing command: /usr/bin/env mv /var/lib/boinc/slots/1/PanDA_Pilot-5890751990/93945790-7f51-4500-8e53-dde7851059de_52199.1.job.log.tgz /var/lib/boinc/slots/1/93
[2023-06-28 10:20:58] 2023-06-28 08:20:23,286 | INFO | Adding to output.list: 93945790-7f51-4500-8e53-dde7851059de_52199.1.job.log.tgz davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/07/f5/93945790-7f51-
[2023-06-28 10:20:58] 2023-06-28 08:20:23,289 | INFO | executing command: ps aux -q 7398
[2023-06-28 10:20:58] 2023-06-28 08:20:23,335 | INFO | summary of transferred files:
[2023-06-28 10:20:58] 2023-06-28 08:20:23,335 | INFO | -- lfn=93945790-7f51-4500-8e53-dde7851059de_52199.1.job.log.tgz, status_code=0, status=transferred
[2023-06-28 10:20:58] 2023-06-28 08:20:23,335 | INFO | stage-out finished correctly
[2023-06-28 10:20:58] 2023-06-28 08:20:24,317 | INFO | finished stage-out for finished payload, adding job to finished_jobs queue
[2023-06-28 10:20:58] 2023-06-28 08:20:25,527 | INFO | monitor loop #221: job 0:5890751990 is in state 'finished'
[2023-06-28 10:20:58] 2023-06-28 08:20:25,527 | INFO | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-06-28 10:20:58] 2023-06-28 08:20:25,973 | INFO | job 5890751990 has state=finished
[2023-06-28 10:20:58] 2023-06-28 08:20:25,974 | INFO | preparing for final server update for job 5890751990 in state='finished'
[2023-06-28 10:20:58] 2023-06-28 08:20:25,974 | INFO | this job has now completed (state=finished)
[2023-06-28 10:20:58] 2023-06-28 08:20:25,974 | INFO | pilot will not update the server (heartbeat message will be written to file)
[2023-06-28 10:20:58] 2023-06-28 08:20:25,974 | INFO | job 5890751990 has finished - writing final server update
[2023-06-28 10:20:58] 2023-06-28 08:20:25,975 | INFO | fitting pss+swap vs Time
[2023-06-28 10:20:58] 2023-06-28 08:20:25,975 | INFO | current memory leak: 3009.93 B/s (using 8 data points, chi2=0.04)
[2023-06-28 10:20:58] 2023-06-28 08:20:25,976 | INFO | total number of processed events: 2 (read)
[2023-06-28 10:20:58] 2023-06-28 08:20:25,977 | INFO | executing command: lscpu
[2023-06-28 10:20:58] 2023-06-28 08:20:26,007 | INFO | found 2 cores (2 cores per socket, 1 sockets)
[2023-06-28 10:20:58] 2023-06-28 08:20:26,008 | INFO | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2023-06-28 10:20:58] 2023-06-28 08:20:26,035 | INFO | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2023-06-28 10:20:58] 2023-06-28 08:20:28,042 | INFO | monitor loop #222: job 0:5890751990 is in state 'finished'
[2023-06-28 10:20:58] 2023-06-28 08:20:28,042 | INFO | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-06-28 10:20:58] 2023-06-28 08:20:30,557 | INFO | monitor loop #223: job 0:5890751990 is in state 'finished'
[2023-06-28 10:20:58] 2023-06-28 08:20:30,557 | INFO | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-06-28 10:20:58] 2023-06-28 08:20:33,070 | INFO | monitor loop #224: job 0:5890751990 is in state 'finished'
[2023-06-28 10:20:58] 2023-06-28 08:20:33,072 | INFO | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-06-28 10:20:58] 2023-06-28 08:20:35,587 | INFO | monitor loop #225: job 0:5890751990 is in state 'finished'
[2023-06-28 10:20:58] 2023-06-28 08:20:35,588 | INFO | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-06-28 10:20:58] 2023-06-28 08:20:38,091 | INFO | monitor loop #226: job 0:5890751990 is in state 'finished'
[2023-06-28 10:20:58] 2023-06-28 08:20:38,091 | INFO | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-06-28 10:20:58] 2023-06-28 08:20:38,836 | INFO | executing command: python3 /var/lib/boinc/slots/1/pilot3/pilot/scripts/cpu_arch.py --alg gcc
[2023-06-28 10:20:58] 2023-06-28 08:20:39,051 | INFO | using path: /var/lib/boinc/slots/1/PanDA_Pilot-5890751990/memory_monitor_summary.json (trf name=prmon)
[2023-06-28 10:20:58] 2023-06-28 08:20:39,052 | INFO | extracted standard info from prmon json
[2023-06-28 10:20:58] 2023-06-28 08:20:39,052 | INFO | extracted standard memory fields from prmon json
[2023-06-28 10:20:58] 2023-06-28 08:20:39,052 | INFO | ..............................
[2023-06-28 10:20:58] 2023-06-28 08:20:39,052 | INFO | . Timing measurements:
[2023-06-28 10:20:58] 2023-06-28 08:20:39,052 | INFO | . get job = 49 s
[2023-06-28 10:20:58] 2023-06-28 08:20:39,052 | INFO | . initial setup = 62 s
[2023-06-28 10:20:58] 2023-06-28 08:20:39,052 | INFO | . payload setup = 34 s
[2023-06-28 10:20:58] 2023-06-28 08:20:39,053 | INFO | . stage-in = 59 s
[2023-06-28 10:20:58] 2023-06-28 08:20:39,053 | INFO | . payload execution = 877 s
[2023-06-28 10:20:58] 2023-06-28 08:20:39,053 | INFO | . stage-out = 360 s
[2023-06-28 10:20:58] 2023-06-28 08:20:39,053 | INFO | ..............................
[2023-06-28 10:20:58] 2023-06-28 08:20:39,164 | INFO |
[2023-06-28 10:20:58] 2023-06-28 08:20:39,164 | INFO | job summary report
[2023-06-28 10:20:58] 2023-06-28 08:20:39,164 | INFO | --------------------------------------------------
[2023-06-28 10:20:58] 2023-06-28 08:20:39,164 | INFO | PanDA job id: 5890751990
[2023-06-28 10:20:58] 2023-06-28 08:20:39,164 | INFO | task id: NULL
[2023-06-28 10:20:58] 2023-06-28 08:20:39,164 | INFO | errors: (none)
[2023-06-28 10:20:58] 2023-06-28 08:20:39,164 | INFO | status: LOG_TRANSFER = DONE
[2023-06-28 10:20:58] 2023-06-28 08:20:39,164 | INFO | pilot state: finished
[2023-06-28 10:20:58] 2023-06-28 08:20:39,164 | INFO | transexitcode: 0
[2023-06-28 10:20:58] 2023-06-28 08:20:39,164 | INFO | exeerrorcode: 0
[2023-06-28 10:20:58] 2023-06-28 08:20:39,165 | INFO | exeerrordiag:
[2023-06-28 10:20:58] 2023-06-28 08:20:39,165 | INFO | exitcode: 0
[2023-06-28 10:20:58] 2023-06-28 08:20:39,165 | INFO | exitmsg: OK
[2023-06-28 10:20:58] 2023-06-28 08:20:39,165 | INFO | cpuconsumptiontime: 394 s
[2023-06-28 10:20:58] 2023-06-28 08:20:39,165 | INFO | nevents: 2
[2023-06-28 10:20:58] 2023-06-28 08:20:39,165 | INFO | neventsw: 0
[2023-06-28 10:20:58] 2023-06-28 08:20:39,165 | INFO | pid: 13922
[2023-06-28 10:20:58] 2023-06-28 08:20:39,165 | INFO | pgrp: 13922
[2023-06-28 10:20:58] 2023-06-28 08:20:39,165 | INFO | corecount: 1
[2023-06-28 10:20:58] 2023-06-28 08:20:39,165 | INFO | event service: False
[2023-06-28 10:20:58] 2023-06-28 08:20:39,165 | INFO | sizes: {0: 2490362, 1: 2490561, 12: 2490707, 23: 2490735, 33: 2490763, 44: 2490791, 55: 2490947, 65: 2490975, 71: 2491063, 76: 2491091, 915: 2512928, 1276: 2522238
[2023-06-28 10:20:58] 2023-06-28 08:20:39,165 | INFO | --------------------------------------------------
[2023-06-28 10:20:58] 2023-06-28 08:20:39,165 | INFO |
[2023-06-28 10:20:58] 2023-06-28 08:20:39,166 | INFO | executing command: ls -lF /var/lib/boinc/slots/1
[2023-06-28 10:20:58] 2023-06-28 08:20:39,201 | INFO | queue jobs had 0 job(s) [purged]
[2023-06-28 10:20:58] 2023-06-28 08:20:39,201 | INFO | queue payloads had 0 job(s) [purged]
[2023-06-28 10:20:58] 2023-06-28 08:20:39,201 | INFO | queue data_in had 0 job(s) [purged]
[2023-06-28 10:20:58] 2023-06-28 08:20:39,201 | INFO | queue data_out had 0 job(s) [purged]
[2023-06-28 10:20:58] 2023-06-28 08:20:39,201 | INFO | queue current_data_in had 0 job(s) [purged]
[2023-06-28 10:20:58] 2023-06-28 08:20:39,202 | INFO | queue validated_jobs had 0 job(s) [purged]
[2023-06-28 10:20:58] 2023-06-28 08:20:39,202 | INFO | queue validated_payloads had 0 job(s) [purged]
[2023-06-28 10:20:58] 2023-06-28 08:20:39,202 | INFO | queue monitored_payloads had 0 job(s) [purged]
[2023-06-28 10:20:58] 2023-06-28 08:20:39,202 | INFO | queue finished_jobs had 0 job(s) [purged]
[2023-06-28 10:20:58] 2023-06-28 08:20:39,202 | INFO | queue finished_payloads had 0 job(s) [purged]
[2023-06-28 10:20:58] 2023-06-28 08:20:39,202 | INFO | queue finished_data_in had 1 job(s) [purged]
[2023-06-28 10:20:58] 2023-06-28 08:20:39,202 | INFO | queue finished_data_out had 0 job(s) [purged]
[2023-06-28 10:20:58] 2023-06-28 08:20:39,202 | INFO | queue failed_jobs had 0 job(s) [purged]
[2023-06-28 10:20:58] 2023-06-28 08:20:39,202 | INFO | queue failed_payloads had 0 job(s) [purged]
[2023-06-28 10:20:58] 2023-06-28 08:20:39,202 | INFO | queue failed_data_in had 0 job(s) [purged]
[2023-06-28 10:20:58] 2023-06-28 08:20:39,202 | INFO | queue failed_data_out had 0 job(s) [purged]
[2023-06-28 10:20:58] 2023-06-28 08:20:39,202 | INFO | queue completed_jobs had 0 job(s) [purged]
[2023-06-28 10:20:58] 2023-06-28 08:20:39,202 | INFO | queue completed_jobids has 1 job(s)
[2023-06-28 10:20:58] 2023-06-28 08:20:39,203 | INFO | queue realtimelog_payloads had 0 job(s) [purged]
[2023-06-28 10:20:58] 2023-06-28 08:20:39,203 | INFO | queue messages had 0 job(s) [purged]
[2023-06-28 10:20:58] 2023-06-28 08:20:39,203 | INFO | job 5890751990 has completed (purged errors)
[2023-06-28 10:20:58] 2023-06-28 08:20:39,203 | INFO | overall cleanup function is called
[2023-06-28 10:20:58] 2023-06-28 08:20:40,211 | INFO | --- collectZombieJob: --- 10, [13922]
[2023-06-28 10:20:58] 2023-06-28 08:20:40,212 | INFO | zombie collector trying to kill pid 13922
[2023-06-28 10:20:58] 2023-06-28 08:20:40,213 | INFO | harmless exception when collecting zombies: [Errno 10] No child processes
[2023-06-28 10:20:58] 2023-06-28 08:20:41,224 | INFO | collected zombie processes
[2023-06-28 10:20:58] 2023-06-28 08:20:41,224 | INFO | will now attempt to kill all subprocesses of pid=13922
[2023-06-28 10:20:58] 2023-06-28 08:20:41,306 | INFO | process IDs to be killed: [13922] (in reverse order)
[2023-06-28 10:20:58] 2023-06-28 08:20:41,340 | WARNING | found no corresponding commands to process id(s)
[2023-06-28 10:20:58] 2023-06-28 08:20:41,341 | INFO | Do not look for orphan processes in BOINC jobs
[2023-06-28 10:20:58] 2023-06-28 08:20:41,341 | INFO | ready for new job
[2023-06-28 10:20:58] 2023-06-28 08:20:41,341 | INFO | pilot has finished with previous job - re-establishing logging
[2023-06-28 10:20:58] 2023-06-28 08:20:41,342 | INFO | *****************************************
[2023-06-28 10:20:58] 2023-06-28 08:20:41,342 | INFO | *** PanDA Pilot version 3.6.0 (108) ***
[2023-06-28 10:20:58] 2023-06-28 08:20:41,342 | INFO | *****************************************
[2023-06-28 10:20:58] 2023-06-28 08:20:41,343 | INFO |
[2023-06-28 10:20:58] 2023-06-28 08:20:41,343 | INFO | pilot is running in a VM
[2023-06-28 10:20:58] 2023-06-28 08:20:41,343 | INFO | architecture information:
[2023-06-28 10:20:58] 2023-06-28 08:20:41,343 | INFO | executing command: cat /etc/os-release
[2023-06-28 10:20:58] 2023-06-28 08:20:41,364 | INFO | cat /etc/os-release:
[2023-06-28 10:20:58] NAME="CentOS Linux"
[2023-06-28 10:20:58] VERSION="7 (Core)"
[2023-06-28 10:20:58] ID="centos"
[2023-06-28 10:20:58] ID_LIKE="rhel fedora"
[2023-06-28 10:20:58] VERSION_ID="7"
[2023-06-28 10:20:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2023-06-28 10:20:58] ANSI_COLOR="0;31"
[2023-06-28 10:20:58] CPE_NAME="cpe:/o:centos:centos:7"
[2023-06-28 10:20:58] HOME_URL="https://www.centos.org/"
[2023-06-28 10:20:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2023-06-28 10:20:58]
[2023-06-28 10:20:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2023-06-28 10:20:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2023-06-28 10:20:58] REDHAT_SUPPORT_PRODUCT="centos"
[2023-06-28 10:20:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2023-06-28 10:20:58]
[2023-06-28 10:20:58] 2023-06-28 08:20:41,364 | INFO | *****************************************
[2023-06-28 10:20:58] 2023-06-28 08:20:41,873 | INFO | executing command: df -mP /var/lib/boinc/slots/1
[2023-06-28 10:20:58] 2023-06-28 08:20:41,896 | INFO | sufficient remaining disk space (11413749760 B)
[2023-06-28 10:20:58] 2023-06-28 08:20:41,896 | WARNING | since timefloor is set to 0, pilot was only allowed to run one job
[2023-06-28 10:20:58] 2023-06-28 08:20:41,896 | WARNING | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2023-06-28 10:20:58] 2023-06-28 08:20:41,896 | INFO | [job] retrieve thread has finished
[2023-06-28 10:20:58] 2023-06-28 08:20:41,897 | WARNING | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2023-06-28 10:20:58] 2023-06-28 08:20:41,897 | INFO | found 0 job(s) in 20 queues
[2023-06-28 10:20:58] 2023-06-28 08:20:41,897 | WARNING | pilot monitor received instruction that args.graceful_stop has been set
[2023-06-28 10:20:58] 2023-06-28 08:20:41,897 | WARNING | will wait for a maximum of 300 s for threads to finish
[2023-06-28 10:20:58] 2023-06-28 08:20:41,897 | WARNING | job:job_monitor:received graceful stop - abort after this iteration
[2023-06-28 10:20:58] 2023-06-28 08:20:41,897 | INFO | aborting loop
[2023-06-28 10:20:58] 2023-06-28 08:20:41,897 | INFO | [job] job monitor thread has finished
[2023-06-28 10:20:58] 2023-06-28 08:20:41,898 | WARNING | data:copytool_out:received graceful stop - abort after this iteration
[2023-06-28 10:20:58] 2023-06-28 08:20:41,978 | INFO | [job] create_data_payload thread has finished
[2023-06-28 10:20:58] 2023-06-28 08:20:42,096 | INFO | [payload] control thread has finished
[2023-06-28 10:20:58] 2023-06-28 08:20:42,362 | INFO | [payload] execute_payloads thread has finished
[2023-06-28 10:20:58] 2023-06-28 08:20:42,385 | INFO | [job] control thread has finished
[2023-06-28 10:20:58] 2023-06-28 08:20:42,422 | INFO | [data] control thread has finished
[2023-06-28 10:20:58] 2023-06-28 08:20:42,623 | INFO | [payload] validate_pre thread has finished
[2023-06-28 10:20:58] 2023-06-28 08:20:42,907 | INFO | [data] copytool_out thread has finished
[2023-06-28 10:20:58] 2023-06-28 08:20:43,102 | INFO | [data] copytool_in thread has finished
[2023-06-28 10:20:58] 2023-06-28 08:20:43,105 | INFO | [payload] validate_post thread has finished
[2023-06-28 10:20:58] 2023-06-28 08:20:43,233 | INFO | [payload] failed_post thread has finished
[2023-06-28 10:20:58] 2023-06-28 08:20:43,397 | INFO | [job] validate thread has finished
[2023-06-28 10:20:58] 2023-06-28 08:20:44,056 | WARNING | data:queue_monitoring:received graceful stop - abort after this iteration
[2023-06-28 10:20:58] 2023-06-28 08:20:44,212 | WARNING | job:queue_monitor:received graceful stop - abort after this iteration
[2023-06-28 10:20:58] 2023-06-28 08:20:44,212 | INFO | [job] queue monitor thread has finished
[2023-06-28 10:20:58] 2023-06-28 08:20:47,072 | INFO | [data] queue_monitor thread has finished
[2023-06-28 10:20:58] 2023-06-28 08:20:52,161 | INFO | job.realtimelogging is not enabled
[2023-06-28 10:20:58] 2023-06-28 08:20:52,162 | INFO | [payload] run_realtimelog thread has finished
[2023-06-28 10:20:58] 2023-06-28 08:20:53,052 | INFO | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140463593576256)>', '<ExcThread(monitor, started 140462744663808)>']
[2023-06-28 10:20:58] 2023-06-28 08:20:54,010 | WARNING | job_aborted has been set - aborting pilot monitoring
[2023-06-28 10:20:58] 2023-06-28 08:20:54,011 | INFO | [monitor] control thread has ended
[2023-06-28 10:20:58] 2023-06-28 08:20:58,080 | INFO | end of generic workflow (traces error code: 0)
[2023-06-28 10:20:58] 2023-06-28 08:20:58,080 | INFO | traces error code: 0
[2023-06-28 10:20:58] 2023-06-28 08:20:58,080 | INFO | pilot has finished (exit code=0, shell exit code=0)
[2023-06-28 10:20:58] 2023-06-28 08:20:58,166 [wrapper] ==== pilot stdout END ====
[2023-06-28 10:20:58] 2023-06-28 08:20:58,176 [wrapper] ==== wrapper stdout RESUME ====
[2023-06-28 10:20:58] 2023-06-28 08:20:58,184 [wrapper] pilotpid: 7398
[2023-06-28 10:20:58] 2023-06-28 08:20:58,192 [wrapper] Pilot exit status: 0
[2023-06-28 10:20:58] 2023-06-28 08:20:58,234 [wrapper] pandaids: 5890751990
[2023-06-28 10:20:58] 2023-06-28 08:20:58,263 [wrapper] apfmon messages muted
[2023-06-28 10:20:58] 2023-06-28 08:20:58,282 [wrapper] Test setup, not cleaning
[2023-06-28 10:20:58] 2023-06-28 08:20:58,286 [wrapper] ==== wrapper stdout END ====
[2023-06-28 10:20:58] 2023-06-28 08:20:58,291 [wrapper] ==== wrapper stderr END ====
[2023-06-28 10:20:58] 2023-06-28 08:20:58,309 [wrapper] wrapperexiting ec=0, duration=1560
[2023-06-28 10:20:58] 2023-06-28 08:20:58,312 [wrapper] apfmon messages muted
[2023-06-28 10:20:58] *** Error codes and diagnostics ***
[2023-06-28 10:20:58] "exeErrorCode": 0,
[2023-06-28 10:20:58] "exeErrorDiag": "",
[2023-06-28 10:20:58] "pilotErrorCode": 0,
[2023-06-28 10:20:58] "pilotErrorDiag": "",
[2023-06-28 10:20:58] *** Listing of results directory ***
[2023-06-28 10:20:58] insgesamt 44192
[2023-06-28 10:20:58] -rw-r--r--. 1 boinc boinc 410584 28. Jun 09:25 pilot3.tar.gz
[2023-06-28 10:20:58] -rwx------. 1 boinc boinc 27012 28. Jun 09:32 runpilot2-wrapper.sh
[2023-06-28 10:20:58] -rw-r--r--. 1 boinc boinc 4388 28. Jun 09:32 queuedata.json
[2023-06-28 10:20:58] -rw-r--r--. 1 boinc boinc 107 28. Jun 09:54 wrapper_26015_x86_64-pc-linux-gnu
[2023-06-28 10:20:58] -rwxr-xr-x. 1 boinc boinc 7986 28. Jun 09:54 run_atlas
[2023-06-28 10:20:58] -rw-r--r--. 1 boinc boinc 112 28. Jun 09:54 job.xml
[2023-06-28 10:20:58] -rw-r--r--. 2 boinc boinc 17604 28. Jun 09:54 start_atlas.sh
[2023-06-28 10:20:58] drwxrwx--x. 2 boinc boinc 68 28. Jun 09:54 shared
[2023-06-28 10:20:58] -rw-r--r--. 2 boinc boinc 421929 28. Jun 09:54 input.tar.gz
[2023-06-28 10:20:58] -rw-r--r--. 1 boinc boinc 6020 28. Jun 09:54 init_data.xml
[2023-06-28 10:20:58] -rw-r--r--. 2 boinc boinc 38184411 28. Jun 09:54 EVNT.04972714._000028.pool.root.1
[2023-06-28 10:20:58] -rw-r--r--. 1 boinc boinc 0 28. Jun 09:54 boinc_lockfile
[2023-06-28 10:20:58] -rw-r--r--. 1 boinc boinc 2682 28. Jun 09:54 pandaJob.out
[2023-06-28 10:20:58] -rw-------. 1 boinc boinc 424 28. Jun 09:54 setup.sh.local
[2023-06-28 10:20:58] -rw-------. 1 boinc boinc 1393705 28. Jun 09:56 cric_ddmendpoints.json
[2023-06-28 10:20:58] -rw-------. 1 boinc boinc 1015093 28. Jun 09:56 agis_schedconf.cvmfs.json
[2023-06-28 10:20:58] drwx------. 4 boinc boinc 4096 28. Jun 09:57 pilot3
[2023-06-28 10:20:58] -rw-------. 1 boinc boinc 1419340 28. Jun 10:14 output.1.93945790-7f51-4500-8e53-dde7851059de_52199.pool.root
[2023-06-28 10:20:58] -rw-------. 1 boinc boinc 1025 28. Jun 10:14 memory_monitor_summary.json
[2023-06-28 10:20:58] -rw-r--r--. 1 boinc boinc 533 28. Jun 10:14 boinc_task_state.xml
[2023-06-28 10:20:58] -rw-------. 1 boinc boinc 181453 28. Jun 10:17 93945790-7f51-4500-8e53-dde7851059de_52199.1.job.log.tgz
[2023-06-28 10:20:58] -rw-------. 1 boinc boinc 7104 28. Jun 10:20 heartbeat.json
[2023-06-28 10:20:58] -rw-r--r--. 1 boinc boinc 8192 28. Jun 10:20 boinc_mmap_file
[2023-06-28 10:20:58] -rw-r--r--. 1 boinc boinc 25 28. Jun 10:20 wrapper_checkpoint.txt
[2023-06-28 10:20:58] -rw-------. 1 boinc boinc 4170 28. Jun 10:20 pilotlog.txt
[2023-06-28 10:20:58] -rw-------. 1 boinc boinc 202124 28. Jun 10:20 93945790-7f51-4500-8e53-dde7851059de_52199.1.job.log
[2023-06-28 10:20:58] -rw-------. 1 boinc boinc 464 28. Jun 10:20 output.list
[2023-06-28 10:20:58] -rw-r--r--. 1 boinc boinc 748 28. Jun 10:20 runtime_log
[2023-06-28 10:20:58] -rw-------. 1 boinc boinc 1822720 28. Jun 10:20 result.tar.gz
[2023-06-28 10:20:58] -rw-r--r--. 1 boinc boinc 11822 28. Jun 10:20 runtime_log.err
[2023-06-28 10:20:58] -rw-------. 1 boinc boinc 632 28. Jun 10:20 0CWNDm5peY3n7Olcko1bjSoqABFKDmABFKDm7AsVDmzJMKDmlGveNo.diag
[2023-06-28 10:20:58] -rw-r--r--. 1 boinc boinc 22950 28. Jun 10:20 stderr.txt
[2023-06-28 10:20:58] HITS file was successfully produced:
[2023-06-28 10:20:58] -rw-------. 1 boinc boinc 1419340 28. Jun 10:14 shared/HITS.pool.root.1
[2023-06-28 10:20:58] *** Contents of shared directory: ***
[2023-06-28 10:20:58] insgesamt 40896
[2023-06-28 10:20:58] -rw-r--r--. 2 boinc boinc 17604 28. Jun 09:54 start_atlas.sh
[2023-06-28 10:20:58] -rw-r--r--. 2 boinc boinc 421929 28. Jun 09:54 input.tar.gz
[2023-06-28 10:20:58] -rw-r--r--. 2 boinc boinc 38184411 28. Jun 09:54 ATLAS.root_0
[2023-06-28 10:20:58] -rw-------. 1 boinc boinc 1419340 28. Jun 10:14 HITS.pool.root.1
[2023-06-28 10:20:58] -rw-------. 1 boinc boinc 1822720 28. Jun 10:20 result.tar.gz
10:21:00 (3597): run_atlas exited; CPU time 361.335361
10:21:00 (3597): called boinc_finish(0)
</stderr_txt>
]]>
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