Name LnWMDmlvmY3n7Olcko1bjSoqABFKDmABFKDm7AsVDmlLMKDmnR5X2n_0
Workunit 2315258
Created 28 Jun 2023, 16:10:40 UTC
Sent 28 Jun 2023, 16:24:49 UTC
Report deadline 5 Jul 2023, 16:24:49 UTC
Received 28 Jun 2023, 16:49:08 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 4202
Run time 20 min 13 sec
CPU time 2 min 43 sec
Validate state Valid
Credit 18.61
Device peak FLOPS 5.73 GFLOPS
Application version ATLAS Simulation v3.01 (vbox64_mt_mcore_atlas)
windows_x86_64
Peak working set size 97.75 MB
Peak swap size 109.18 MB
Peak disk usage 538.76 MB

Stderr output

<core_client_version>7.22.2</core_client_version>
<![CDATA[
<stderr_txt>
2023-06-28 12:25:07 (21340): Detected: vboxwrapper 26206
2023-06-28 12:25:07 (21340): Detected: BOINC client v7.22.2
2023-06-28 12:25:09 (21340): Detected: VirtualBox VboxManage Interface (Version: 7.0.8)
2023-06-28 12:25:09 (21340): Successfully copied 'init_data.xml' to the shared directory.
2023-06-28 12:25:10 (21340): Create VM. (boinc_239b2a3ccaaef081, slot#4)
2023-06-28 12:25:10 (21340): Setting Memory Size for VM. (4100MB)
2023-06-28 12:25:10 (21340): Setting CPU Count for VM. (1)
2023-06-28 12:25:11 (21340): Setting Chipset Options for VM.
2023-06-28 12:25:11 (21340): Setting Graphics Controller Options for VM.
2023-06-28 12:25:11 (21340): Setting Boot Options for VM.
2023-06-28 12:25:11 (21340): Setting Network Configuration for NAT.
2023-06-28 12:25:12 (21340): Enabling VM Network Access.
2023-06-28 12:25:12 (21340): Disabling USB Support for VM.
2023-06-28 12:25:12 (21340): Disabling COM Port Support for VM.
2023-06-28 12:25:12 (21340): Disabling LPT Port Support for VM.
2023-06-28 12:25:13 (21340): Disabling Audio Support for VM.
2023-06-28 12:25:13 (21340): Disabling Clipboard Support for VM.
2023-06-28 12:25:13 (21340): Disabling Drag and Drop Support for VM.
2023-06-28 12:25:14 (21340): Adding storage controller(s) to VM.
2023-06-28 12:25:14 (21340): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2023-06-28 12:25:17 (21340): Adding VirtualBox Guest Additions to VM.
2023-06-28 12:25:17 (21340): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2023-06-28 12:25:17 (21340): forwarding host port 58105 to guest port 80
2023-06-28 12:25:18 (21340): Enabling remote desktop for VM.
2023-06-28 12:25:18 (21340): Enabling shared directory for VM.
2023-06-28 12:25:19 (21340): Starting VM using VBoxManage interface. (boinc_239b2a3ccaaef081, slot#4)
2023-06-28 12:25:26 (21340): Successfully started VM. (PID = '21456')
2023-06-28 12:25:26 (21340): Reporting VM Process ID to BOINC.
2023-06-28 12:25:26 (21340): Guest Log: BIOS: VirtualBox 7.0.8
2023-06-28 12:25:26 (21340): Guest Log: CPUID EDX: 0x178bfbff
2023-06-28 12:25:26 (21340): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2023-06-28 12:25:26 (21340): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2023-06-28 12:25:26 (21340): VM state change detected. (old = 'poweredoff', new = 'running')
2023-06-28 12:25:26 (21340): Detected: Web Application Enabled (http://localhost:58105)
2023-06-28 12:25:26 (21340): Detected: Remote Desktop Enabled (localhost:58106)
2023-06-28 12:25:26 (21340): Preference change detected
2023-06-28 12:25:26 (21340): Setting CPU throttle for VM. (90%)
2023-06-28 12:25:26 (21340): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 900 seconds) or (Vbox_job.xml: 900 seconds))
2023-06-28 12:25:28 (21340): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2023-06-28 12:25:28 (21340): Guest Log: BIOS: Booting from Hard Disk...
2023-06-28 12:25:31 (21340): Guest Log: BIOS: KBD: unsupported int 16h function 03
2023-06-28 12:25:31 (21340): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2023-06-28 12:25:31 (21340): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2023-06-28 12:25:31 (21340): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2023-06-28 12:25:31 (21340): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2023-06-28 12:25:31 (21340): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2023-06-28 12:25:31 (21340): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2023-06-28 12:25:31 (21340): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2023-06-28 12:25:31 (21340): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2023-06-28 12:25:31 (21340): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2023-06-28 12:25:31 (21340): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2023-06-28 12:25:31 (21340): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2023-06-28 12:25:31 (21340): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2023-06-28 12:25:31 (21340): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2023-06-28 12:25:31 (21340): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2023-06-28 12:25:31 (21340): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2023-06-28 12:25:31 (21340): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2023-06-28 12:25:31 (21340): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2023-06-28 12:25:31 (21340): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2023-06-28 12:25:31 (21340): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2023-06-28 12:25:31 (21340): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2023-06-28 12:25:31 (21340): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2023-06-28 12:25:31 (21340): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2023-06-28 12:25:31 (21340): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2023-06-28 12:25:31 (21340): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2023-06-28 12:25:31 (21340): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2023-06-28 12:25:31 (21340): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2023-06-28 12:25:31 (21340): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2023-06-28 12:25:31 (21340): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2023-06-28 12:25:31 (21340): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2023-06-28 12:25:31 (21340): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2023-06-28 12:25:31 (21340): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2023-06-28 12:25:34 (21340): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2023-06-28 12:25:34 (21340): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2023-06-28 12:25:42 (21340): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2023-06-28 12:25:42 (21340): Guest Log: 00:00:00.000109 main     Log opened 2023-06-28T12:25:40.109687000Z
2023-06-28 12:25:42 (21340): Guest Log: 00:00:00.000205 main     OS Product: Linux
2023-06-28 12:25:42 (21340): Guest Log: 00:00:00.000227 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2023-06-28 12:25:42 (21340): Guest Log: 00:00:00.000246 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2023-06-28 12:25:42 (21340): Guest Log: 00:00:00.000264 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2023-06-28 12:25:42 (21340): Guest Log: 00:00:00.000264 main     Process ID: 1247
2023-06-28 12:25:42 (21340): Guest Log: 00:00:00.000265 main     Package type: LINUX_64BITS_GENERIC
2023-06-28 12:25:42 (21340): Guest Log: 00:00:00.001712 main     5.2.32 r132073 started. Verbose level = 0
2023-06-28 12:25:42 (21340): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2023-06-28 12:25:42 (21340): Guest Log: [INFO] Mounting shared directory
2023-06-28 12:25:42 (21340): Guest Log: [INFO] Checking for init_data.xml
2023-06-28 12:25:52 (21340): Guest Log: 00:00:10.018932 timesync vgsvcTimeSyncWorker: Radical guest time change: 14 411 872 099 000ns (GuestNow=1 687 969 551 999 772 000 ns GuestLast=1 687 955 140 127 673 000 ns fSetTimeLastLoop=true )
2023-06-28 12:25:52 (21340): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2023-06-28 12:25:52 (21340): Guest Log: [INFO] Detected branch: dev
2023-06-28 12:25:53 (21340): Guest Log: This is the dev version of the ATLAS job wrapper
2023-06-28 12:25:53 (21340): Guest Log: Copying input files
2023-06-28 12:25:53 (21340): Guest Log: Copied input files into RunAtlas.
2023-06-28 12:25:53 (21340): Guest Log: This VM did not configure a local http proxy via BOINC.
2023-06-28 12:25:53 (21340): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2023-06-28 12:25:53 (21340): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2023-06-28 12:25:53 (21340): Guest Log: Further information can be found at the LHC@home message board.
2023-06-28 12:27:03 (21340): Guest Log: Running cvmfs_config stat atlas.cern.ch
2023-06-28 12:27:03 (21340): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2023-06-28 12:27:03 (21340): Guest Log: 2.6.3.0 1523 1 30064 120677 3 1 3116385 4096000 0 65024 0 0 n/a 0 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2023-06-28 12:27:04 (21340): Guest Log: copied the webapp to /var/www
2023-06-28 12:27:04 (21340): Guest Log: core_number=1
2023-06-28 12:27:04 (21340): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2023-06-28 12:27:04 (21340): Guest Log:  *** Starting ATLAS job. (PandaID=5891106146 taskID=NULL&cor) ***
2023-06-28 12:48:36 (21340): Guest Log:  *** Job finished ***
2023-06-28 12:48:36 (21340): Guest Log:  *** The last 20 lines of the pilot log: ***
2023-06-28 12:48:36 (21340): Guest Log:  *** Error codes and diagnostics ***
2023-06-28 12:48:36 (21340): Guest Log:     "exeErrorCode": 65,
2023-06-28 12:48:36 (21340): Guest Log:     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1); Logfile error in log.EVNTtoHITS: \"Segmentation fault: Event counter: 0; Run: unknown; Evt: unknown; Current algorithm: ISF_Kernel_FullG4; Current Function: unknown\"",
2023-06-28 12:48:36 (21340): Guest Log:     "pilotErrorCode": 1305,
2023-06-28 12:48:36 (21340): Guest Log:     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute 2023-06-28 16:41:47,733 CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1); Logfile error in log.EVNTtoHITS: \"Segmentation fault: Event counter: 0; Run: unknown; Evt: unknown; Current algorithm",
2023-06-28 12:48:36 (21340): Guest Log:  *** Listing of results directory ***
2023-06-28 12:48:36 (21340): Guest Log: total 3784
2023-06-28 12:48:36 (21340): Guest Log: -rw-r--r--. 1 atlas atlas  410584 Jun 28 15:39 pilot3.tar.gz
2023-06-28 12:48:36 (21340): Guest Log: -rwx------. 1 atlas atlas   27012 Jun 28 16:10 runpilot2-wrapper.sh
2023-06-28 12:48:36 (21340): Guest Log: -rw-r--r--. 1 atlas atlas    4388 Jun 28 16:10 queuedata.json
2023-06-28 12:48:36 (21340): Guest Log: -rwxr-xr-x. 1 atlas atlas   11968 Jun 28 16:25 init_data.xml
2023-06-28 12:48:36 (21340): Guest Log: -rwxr-xr-x. 1 atlas atlas  421972 Jun 28 16:25 input.tar.gz
2023-06-28 12:48:36 (21340): Guest Log: -rwxr-xr-x. 1 atlas atlas   17604 Jun 28 16:25 start_atlas.sh
2023-06-28 12:48:36 (21340): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Jun 28 16:25 EVNT.04972714._000036.pool.root.1 -> /data/./ATLAS.root_0
2023-06-28 12:48:36 (21340): Guest Log: -rw-r--r--. 1 atlas atlas    2758 Jun 28 16:27 pandaJob.out
2023-06-28 12:48:36 (21340): Guest Log: -rw-------. 1 atlas atlas     424 Jun 28 16:27 setup.sh.local
2023-06-28 12:48:36 (21340): Guest Log: -rw-------. 1 atlas atlas 1393705 Jun 28 16:30 cric_ddmendpoints.json
2023-06-28 12:48:36 (21340): Guest Log: -rw-------. 1 atlas atlas 1013816 Jun 28 16:30 agis_schedconf.cvmfs.json
2023-06-28 12:48:36 (21340): Guest Log: drwx------. 4 atlas atlas     284 Jun 28 16:31 pilot3
2023-06-28 12:48:36 (21340): Guest Log: -rw-------. 1 atlas atlas    1013 Jun 28 16:41 memory_monitor_summary.json
2023-06-28 12:48:36 (21340): Guest Log: -rw-------. 1 atlas atlas   78349 Jun 28 16:41 03894441-168b-4747-9063-24f2e42a5f40_34639.1.job.log.tgz
2023-06-28 12:48:36 (21340): Guest Log: -rw-------. 1 atlas atlas    8218 Jun 28 16:48 heartbeat.json
2023-06-28 12:48:36 (21340): Guest Log: -rw-------. 1 atlas atlas    4140 Jun 28 16:48 pilotlog.txt
2023-06-28 12:48:36 (21340): Guest Log: -rw-------. 1 atlas atlas  153019 Jun 28 16:48 03894441-168b-4747-9063-24f2e42a5f40_34639.1.job.log
2023-06-28 12:48:36 (21340): Guest Log: -rw-------. 1 atlas atlas     227 Jun 28 16:48 output.list
2023-06-28 12:48:36 (21340): Guest Log: -rw-r--r--. 1 atlas atlas     686 Jun 28 16:48 runtime_log
2023-06-28 12:48:36 (21340): Guest Log: -rw-------. 1 atlas atlas  256000 Jun 28 16:48 result.tar.gz
2023-06-28 12:48:36 (21340): Guest Log: -rw-r--r--. 1 atlas atlas   11194 Jun 28 16:48 runtime_log.err
2023-06-28 12:48:36 (21340): Guest Log: -rw-------. 1 atlas atlas     625 Jun 28 16:48 LnWMDmlvmY3n7Olcko1bjSoqABFKDmABFKDm7AsVDmlLMKDmnR5X2n.diag
2023-06-28 12:48:36 (21340): Guest Log: Looking for outputfile output.1.03894441-168b-4747-9063-24f2e42a5f40_34639.pool.root
2023-06-28 12:48:36 (21340): Guest Log: No HITS file was produced
2023-06-28 12:48:36 (21340): Guest Log: Successfully finished the ATLAS job!
2023-06-28 12:48:36 (21340): Guest Log: Copying the results back to the shared directory!
2023-06-28 12:48:36 (21340): Guest Log:  *** Contents of shared directory: ***
2023-06-28 12:48:36 (21340): Guest Log: total 38500
2023-06-28 12:48:36 (21340): Guest Log: -rwxrwxrwx. 1 root root 38705932 Jun 28 16:25 ATLAS.root_0
2023-06-28 12:48:36 (21340): Guest Log: -rwxrwxrwx. 1 root root    11968 Jun 28 16:25 init_data.xml
2023-06-28 12:48:36 (21340): Guest Log: -rwxrwxrwx. 1 root root   421972 Jun 28 16:25 input.tar.gz
2023-06-28 12:48:36 (21340): Guest Log: -rwxrwxrwx. 1 root root   256000 Jun 28 16:48 result.tar.gz
2023-06-28 12:48:36 (21340): Guest Log: -rwxrwxrwx. 1 root root    17604 Jun 28 16:25 start_atlas.sh
2023-06-28 12:48:36 (21340): Guest Log:  *** Success! Shutting down the machine. ***
2023-06-28 12:48:36 (21340): VM Completion File Detected.
2023-06-28 12:48:36 (21340): Powering off VM.
2023-06-28 12:48:36 (21340): Successfully stopped VM.
2023-06-28 12:48:36 (21340): Deregistering VM. (boinc_239b2a3ccaaef081, slot#4)
2023-06-28 12:48:36 (21340): Removing network bandwidth throttle group from VM.
2023-06-28 12:48:36 (21340): Removing VM from VirtualBox.
12:48:42 (21340): called boinc_finish(0)

</stderr_txt>
]]>


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