Name 5uUKDmWWbZ3n7Olcko1bjSoqABFKDmABFKDm7AsVDmCVMKDmCjT8hm_0
Workunit 2315711
Created 30 Jun 2023, 22:11:59 UTC
Sent 30 Jun 2023, 22:15:01 UTC
Report deadline 7 Jul 2023, 22:15:01 UTC
Received 30 Jun 2023, 22:57:25 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 4202
Run time 19 min 55 sec
CPU time 2 min 35 sec
Validate state Valid
Credit 18.68
Device peak FLOPS 5.73 GFLOPS
Application version ATLAS Simulation v3.01 (vbox64_mt_mcore_atlas)
windows_x86_64
Peak working set size 88.05 MB
Peak swap size 104.02 MB
Peak disk usage 957.11 MB

Stderr output

<core_client_version>7.22.2</core_client_version>
<![CDATA[
<stderr_txt>
2023-06-30 18:34:12 (18420): Detected: vboxwrapper 26206
2023-06-30 18:34:12 (18420): Detected: BOINC client v7.22.2
2023-06-30 18:34:13 (18420): Detected: VirtualBox VboxManage Interface (Version: 7.0.8)
2023-06-30 18:34:13 (18420): Successfully copied 'init_data.xml' to the shared directory.
2023-06-30 18:34:13 (18420): Create VM. (boinc_6795a4a4fa47d5ae, slot#3)
2023-06-30 18:34:14 (18420): Setting Memory Size for VM. (4100MB)
2023-06-30 18:34:14 (18420): Setting CPU Count for VM. (1)
2023-06-30 18:34:15 (18420): Setting Chipset Options for VM.
2023-06-30 18:34:15 (18420): Setting Graphics Controller Options for VM.
2023-06-30 18:34:15 (18420): Setting Boot Options for VM.
2023-06-30 18:34:15 (18420): Setting Network Configuration for NAT.
2023-06-30 18:34:16 (18420): Enabling VM Network Access.
2023-06-30 18:34:16 (18420): Disabling USB Support for VM.
2023-06-30 18:34:16 (18420): Disabling COM Port Support for VM.
2023-06-30 18:34:16 (18420): Disabling LPT Port Support for VM.
2023-06-30 18:34:17 (18420): Disabling Audio Support for VM.
2023-06-30 18:34:17 (18420): Disabling Clipboard Support for VM.
2023-06-30 18:34:17 (18420): Disabling Drag and Drop Support for VM.
2023-06-30 18:34:17 (18420): Adding storage controller(s) to VM.
2023-06-30 18:34:18 (18420): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2023-06-30 18:34:21 (18420): Adding VirtualBox Guest Additions to VM.
2023-06-30 18:34:21 (18420): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2023-06-30 18:34:21 (18420): forwarding host port 53641 to guest port 80
2023-06-30 18:34:21 (18420): Enabling remote desktop for VM.
2023-06-30 18:34:22 (18420): Enabling shared directory for VM.
2023-06-30 18:34:23 (18420): Starting VM using VBoxManage interface. (boinc_6795a4a4fa47d5ae, slot#3)
2023-06-30 18:34:29 (18420): Successfully started VM. (PID = '18164')
2023-06-30 18:34:29 (18420): Reporting VM Process ID to BOINC.
2023-06-30 18:34:29 (18420): Guest Log: BIOS: VirtualBox 7.0.8
2023-06-30 18:34:29 (18420): Guest Log: CPUID EDX: 0x178bfbff
2023-06-30 18:34:29 (18420): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2023-06-30 18:34:29 (18420): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2023-06-30 18:34:29 (18420): VM state change detected. (old = 'poweredoff', new = 'running')
2023-06-30 18:34:29 (18420): Detected: Web Application Enabled (http://localhost:53641)
2023-06-30 18:34:29 (18420): Detected: Remote Desktop Enabled (localhost:53642)
2023-06-30 18:34:29 (18420): Preference change detected
2023-06-30 18:34:29 (18420): Setting CPU throttle for VM. (90%)
2023-06-30 18:34:29 (18420): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 900 seconds) or (Vbox_job.xml: 900 seconds))
2023-06-30 18:34:31 (18420): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2023-06-30 18:34:31 (18420): Guest Log: BIOS: Booting from Hard Disk...
2023-06-30 18:34:34 (18420): Guest Log: BIOS: KBD: unsupported int 16h function 03
2023-06-30 18:34:34 (18420): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2023-06-30 18:34:34 (18420): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2023-06-30 18:34:34 (18420): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2023-06-30 18:34:34 (18420): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2023-06-30 18:34:34 (18420): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2023-06-30 18:34:34 (18420): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2023-06-30 18:34:34 (18420): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2023-06-30 18:34:34 (18420): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2023-06-30 18:34:34 (18420): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2023-06-30 18:34:34 (18420): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2023-06-30 18:34:34 (18420): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2023-06-30 18:34:34 (18420): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2023-06-30 18:34:34 (18420): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2023-06-30 18:34:34 (18420): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2023-06-30 18:34:34 (18420): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2023-06-30 18:34:34 (18420): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2023-06-30 18:34:34 (18420): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2023-06-30 18:34:34 (18420): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2023-06-30 18:34:34 (18420): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2023-06-30 18:34:34 (18420): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2023-06-30 18:34:34 (18420): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2023-06-30 18:34:34 (18420): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2023-06-30 18:34:34 (18420): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2023-06-30 18:34:34 (18420): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2023-06-30 18:34:34 (18420): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2023-06-30 18:34:34 (18420): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2023-06-30 18:34:34 (18420): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2023-06-30 18:34:34 (18420): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2023-06-30 18:34:34 (18420): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2023-06-30 18:34:34 (18420): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2023-06-30 18:34:34 (18420): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2023-06-30 18:34:37 (18420): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2023-06-30 18:34:37 (18420): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2023-06-30 18:34:45 (18420): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2023-06-30 18:34:45 (18420): Guest Log: 00:00:00.000138 main     Log opened 2023-06-30T18:34:43.627780000Z
2023-06-30 18:34:45 (18420): Guest Log: 00:00:00.000271 main     OS Product: Linux
2023-06-30 18:34:45 (18420): Guest Log: 00:00:00.000296 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2023-06-30 18:34:45 (18420): Guest Log: 00:00:00.000314 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2023-06-30 18:34:45 (18420): Guest Log: 00:00:00.000332 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2023-06-30 18:34:45 (18420): Guest Log: 00:00:00.000332 main     Process ID: 1244
2023-06-30 18:34:45 (18420): Guest Log: 00:00:00.000333 main     Package type: LINUX_64BITS_GENERIC
2023-06-30 18:34:45 (18420): Guest Log: 00:00:00.001067 main     5.2.32 r132073 started. Verbose level = 0
2023-06-30 18:34:45 (18420): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2023-06-30 18:34:45 (18420): Guest Log: [INFO] Mounting shared directory
2023-06-30 18:34:45 (18420): Guest Log: [INFO] Checking for init_data.xml
2023-06-30 18:34:55 (18420): Guest Log: 00:00:10.014699 timesync vgsvcTimeSyncWorker: Radical guest time change: 14 411 227 808 000ns (GuestNow=1 688 164 494 869 537 000 ns GuestLast=1 688 150 083 641 729 000 ns fSetTimeLastLoop=true )
2023-06-30 18:34:56 (18420): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2023-06-30 18:34:56 (18420): Guest Log: [INFO] Detected branch: dev
2023-06-30 18:34:56 (18420): Guest Log: This is the dev version of the ATLAS job wrapper
2023-06-30 18:34:56 (18420): Guest Log: Copying input files
2023-06-30 18:34:57 (18420): Guest Log: Copied input files into RunAtlas.
2023-06-30 18:34:57 (18420): Guest Log: This VM did not configure a local http proxy via BOINC.
2023-06-30 18:34:57 (18420): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2023-06-30 18:34:57 (18420): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2023-06-30 18:34:57 (18420): Guest Log: Further information can be found at the LHC@home message board.
2023-06-30 18:35:08 (18420): Guest Log: Running cvmfs_config stat atlas.cern.ch
2023-06-30 18:35:18 (18420): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2023-06-30 18:35:18 (18420): Guest Log: 2.6.3.0 1520 0 30064 120765 4 1 3116385 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 0
2023-06-30 18:35:19 (18420): Guest Log: copied the webapp to /var/www
2023-06-30 18:35:19 (18420): Guest Log: core_number=1
2023-06-30 18:35:19 (18420): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2023-06-30 18:35:19 (18420): Guest Log:  *** Starting ATLAS job. (PandaID=5892828846 taskID=NULL&cor) ***
2023-06-30 18:56:53 (18420): Guest Log:  *** Job finished ***
2023-06-30 18:56:53 (18420): Guest Log:  *** The last 20 lines of the pilot log: ***
2023-06-30 18:56:53 (18420): Guest Log:  *** Error codes and diagnostics ***
2023-06-30 18:56:53 (18420): Guest Log:     "exeErrorCode": 65,
2023-06-30 18:56:53 (18420): Guest Log:     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1); Logfile error in log.EVNTtoHITS: \"Segmentation fault: Event counter: 0; Run: unknown; Evt: unknown; Current algorithm: ISF_Kernel_FullG4; Current Function: unknown\"",
2023-06-30 18:56:53 (18420): Guest Log:     "pilotErrorCode": 1305,
2023-06-30 18:56:53 (18420): Guest Log:     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute 2023-06-30 22:48:49,416 CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1); Logfile error in log.EVNTtoHITS: \"Segmentation fault: Event counter: 0; Run: unknown; Evt: unknown; Current algorithm",
2023-06-30 18:56:53 (18420): Guest Log:  *** Listing of results directory ***
2023-06-30 18:56:53 (18420): Guest Log: total 3760
2023-06-30 18:56:53 (18420): Guest Log: -rw-r--r--. 1 atlas atlas  410964 Jun 30 21:37 pilot3.tar.gz
2023-06-30 18:56:53 (18420): Guest Log: -rwx------. 1 atlas atlas   27012 Jun 30 22:11 runpilot2-wrapper.sh
2023-06-30 18:56:53 (18420): Guest Log: -rw-r--r--. 1 atlas atlas    4388 Jun 30 22:11 queuedata.json
2023-06-30 18:56:53 (18420): Guest Log: -rwxr-xr-x. 1 atlas atlas   11969 Jun 30 22:34 init_data.xml
2023-06-30 18:56:53 (18420): Guest Log: -rwxr-xr-x. 1 atlas atlas  422287 Jun 30 22:34 input.tar.gz
2023-06-30 18:56:53 (18420): Guest Log: -rwxr-xr-x. 1 atlas atlas   17604 Jun 30 22:34 start_atlas.sh
2023-06-30 18:56:53 (18420): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Jun 30 22:34 EVNT.04972714._000023.pool.root.1 -> /data/./ATLAS.root_0
2023-06-30 18:56:53 (18420): Guest Log: -rw-r--r--. 1 atlas atlas    2754 Jun 30 22:35 pandaJob.out
2023-06-30 18:56:53 (18420): Guest Log: -rw-------. 1 atlas atlas     424 Jun 30 22:35 setup.sh.local
2023-06-30 18:56:53 (18420): Guest Log: -rw-------. 1 atlas atlas 1389537 Jun 30 22:38 cric_ddmendpoints.json
2023-06-30 18:56:53 (18420): Guest Log: -rw-------. 1 atlas atlas 1012557 Jun 30 22:38 agis_schedconf.cvmfs.json
2023-06-30 18:56:53 (18420): Guest Log: drwx------. 4 atlas atlas     262 Jun 30 22:39 pilot3
2023-06-30 18:56:53 (18420): Guest Log: -rw-------. 1 atlas atlas    1007 Jun 30 22:48 memory_monitor_summary.json
2023-06-30 18:56:53 (18420): Guest Log: -rw-------. 1 atlas atlas   76566 Jun 30 22:48 6f5a6bfd-bb68-42d4-951b-4172ca3ff4fe_98777.1.job.log.tgz
2023-06-30 18:56:53 (18420): Guest Log: -rw-------. 1 atlas atlas    8175 Jun 30 22:56 heartbeat.json
2023-06-30 18:56:53 (18420): Guest Log: -rw-------. 1 atlas atlas    4164 Jun 30 22:56 pilotlog.txt
2023-06-30 18:56:53 (18420): Guest Log: -rw-------. 1 atlas atlas  153810 Jun 30 22:56 6f5a6bfd-bb68-42d4-951b-4172ca3ff4fe_98777.1.job.log
2023-06-30 18:56:53 (18420): Guest Log: -rw-------. 1 atlas atlas     227 Jun 30 22:56 output.list
2023-06-30 18:56:53 (18420): Guest Log: -rw-r--r--. 1 atlas atlas     686 Jun 30 22:56 runtime_log
2023-06-30 18:56:53 (18420): Guest Log: -rw-------. 1 atlas atlas  245760 Jun 30 22:56 result.tar.gz
2023-06-30 18:56:53 (18420): Guest Log: -rw-r--r--. 1 atlas atlas   11194 Jun 30 22:56 runtime_log.err
2023-06-30 18:56:53 (18420): Guest Log: -rw-------. 1 atlas atlas     624 Jun 30 22:56 5uUKDmWWbZ3n7Olcko1bjSoqABFKDmABFKDm7AsVDmCVMKDmCjT8hm.diag
2023-06-30 18:56:53 (18420): Guest Log: Looking for outputfile output.1.6f5a6bfd-bb68-42d4-951b-4172ca3ff4fe_98777.pool.root
2023-06-30 18:56:53 (18420): Guest Log: No HITS file was produced
2023-06-30 18:56:53 (18420): Guest Log: Successfully finished the ATLAS job!
2023-06-30 18:56:53 (18420): Guest Log: Copying the results back to the shared directory!
2023-06-30 18:56:53 (18420): Guest Log:  *** Contents of shared directory: ***
2023-06-30 18:56:53 (18420): Guest Log: total 37820
2023-06-30 18:56:53 (18420): Guest Log: -rwxrwxrwx. 1 root root 38019645 Jun 30 22:34 ATLAS.root_0
2023-06-30 18:56:53 (18420): Guest Log: -rwxrwxrwx. 1 root root    11969 Jun 30 22:34 init_data.xml
2023-06-30 18:56:53 (18420): Guest Log: -rwxrwxrwx. 1 root root   422287 Jun 30 22:15 input.tar.gz
2023-06-30 18:56:53 (18420): Guest Log: -rwxrwxrwx. 1 root root   245760 Jun 30 22:56 result.tar.gz
2023-06-30 18:56:53 (18420): Guest Log: -rwxrwxrwx. 1 root root    17604 Jun 30 22:15 start_atlas.sh
2023-06-30 18:56:53 (18420): Guest Log:  *** Success! Shutting down the machine. ***
2023-06-30 18:56:53 (18420): VM Completion File Detected.
2023-06-30 18:56:53 (18420): Powering off VM.
2023-06-30 18:56:53 (18420): Successfully stopped VM.
2023-06-30 18:56:53 (18420): Deregistering VM. (boinc_6795a4a4fa47d5ae, slot#3)
2023-06-30 18:56:53 (18420): Removing network bandwidth throttle group from VM.
2023-06-30 18:56:54 (18420): Removing VM from VirtualBox.
18:56:59 (18420): called boinc_finish(0)

</stderr_txt>
]]>


©2024 CERN