Name | JMZNDm8OHb3n7Olcko1bjSoqABFKDmABFKDm7AsVDmwnMKDmaUfIjm_1 |
Workunit | 2316600 |
Created | 5 Jul 2023, 13:16:50 UTC |
Sent | 5 Jul 2023, 13:17:42 UTC |
Report deadline | 12 Jul 2023, 13:17:42 UTC |
Received | 5 Jul 2023, 14:28:18 UTC |
Server state | Over |
Outcome | Success |
Client state | Done |
Exit status | 0 (0x00000000) |
Computer ID | 4368 |
Run time | 21 min 49 sec |
CPU time | 13 min 29 sec |
Validate state | Valid |
Credit | 24.40 |
Device peak FLOPS | 7.55 GFLOPS |
Application version | ATLAS Simulation v3.01 (native_mt) x86_64-pc-linux-gnu |
Peak working set size | 1.52 GB |
Peak swap size | 2.13 GB |
Peak disk usage | 83.32 MB |
<core_client_version>7.14.2</core_client_version> <![CDATA[ <stderr_txt> 16:06:16 (8896): wrapper (7.7.26015): starting 16:06:16 (8896): wrapper: running run_atlas (--nthreads 2) [2023-07-05 16:06:16] Arguments: --nthreads 2 [2023-07-05 16:06:16] Threads: 2 [2023-07-05 16:06:16] Checking for CVMFS [2023-07-05 16:06:16] Probing /cvmfs/atlas.cern.ch... OK [2023-07-05 16:06:16] Probing /cvmfs/atlas-condb.cern.ch... OK [2023-07-05 16:06:16] Running cvmfs_config stat atlas.cern.ch [2023-07-05 16:06:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE [2023-07-05 16:06:16] 2.10.1.0 17360 103 46660 120920 0 102 3240356 4194304 0 130560 0 518003 99.994 24583 2791 http://cernvmfs.gridpp.rl.ac.uk:8000/cvmfs/atlas.cern.ch DIRECT 1 [2023-07-05 16:06:16] CVMFS is ok [2023-07-05 16:06:16] Efficiency of ATLAS tasks can be improved by the following measure(s): [2023-07-05 16:06:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io. [2023-07-05 16:06:16] Small home clusters do not require a local http proxy but it is suggested if [2023-07-05 16:06:16] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks. [2023-07-05 16:06:16] Further information can be found at the LHC@home message board. [2023-07-05 16:06:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 [2023-07-05 16:06:16] Checking for apptainer binary... [2023-07-05 16:06:16] apptainer is not installed, using version from CVMFS [2023-07-05 16:06:16] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname [2023-07-05 16:06:17] vps-3dca72ac [2023-07-05 16:06:17] apptainer works [2023-07-05 16:06:17] Set ATHENA_PROC_NUMBER=2 [2023-07-05 16:06:17] Set ATHENA_CORE_NUMBER=2 [2023-07-05 16:06:17] Starting ATLAS job with PandaID=5895972654 [2023-07-05 16:06:17] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh [2023-07-05 16:28:02] *** The last 200 lines of the pilot log: *** [2023-07-05 16:28:02] 2023-07-05 14:27:02,536 | INFO | will try again after 24s.. [2023-07-05 16:28:02] 2023-07-05 14:27:05,031 | INFO | monitor loop #195: job 0:5895972654 is in state 'stageout' [2023-07-05 16:28:02] 2023-07-05 14:27:05,061 | INFO | number of running child processes to parent process 19539: 1 [2023-07-05 16:28:02] 2023-07-05 14:27:05,062 | INFO | maximum number of monitored processes: 10 [2023-07-05 16:28:02] 2023-07-05 14:27:07,564 | INFO | monitor loop #196: job 0:5895972654 is in state 'stageout' [2023-07-05 16:28:02] 2023-07-05 14:27:07,589 | INFO | number of running child processes to parent process 19539: 1 [2023-07-05 16:28:02] 2023-07-05 14:27:07,590 | INFO | maximum number of monitored processes: 10 [2023-07-05 16:28:02] 2023-07-05 14:27:10,093 | INFO | monitor loop #197: job 0:5895972654 is in state 'stageout' [2023-07-05 16:28:02] 2023-07-05 14:27:10,124 | INFO | number of running child processes to parent process 19539: 1 [2023-07-05 16:28:02] 2023-07-05 14:27:10,125 | INFO | maximum number of monitored processes: 10 [2023-07-05 16:28:02] 2023-07-05 14:27:12,628 | INFO | monitor loop #198: job 0:5895972654 is in state 'stageout' [2023-07-05 16:28:02] 2023-07-05 14:27:12,652 | INFO | number of running child processes to parent process 19539: 1 [2023-07-05 16:28:02] 2023-07-05 14:27:12,653 | INFO | maximum number of monitored processes: 10 [2023-07-05 16:28:02] 2023-07-05 14:27:15,155 | INFO | monitor loop #199: job 0:5895972654 is in state 'stageout' [2023-07-05 16:28:02] 2023-07-05 14:27:15,181 | INFO | number of running child processes to parent process 19539: 1 [2023-07-05 16:28:02] 2023-07-05 14:27:15,181 | INFO | maximum number of monitored processes: 10 [2023-07-05 16:28:02] 2023-07-05 14:27:17,684 | INFO | monitor loop #200: job 0:5895972654 is in state 'stageout' [2023-07-05 16:28:02] 2023-07-05 14:27:17,716 | INFO | number of running child processes to parent process 19539: 1 [2023-07-05 16:28:02] 2023-07-05 14:27:17,716 | INFO | maximum number of monitored processes: 10 [2023-07-05 16:28:02] 2023-07-05 14:27:20,220 | INFO | monitor loop #201: job 0:5895972654 is in state 'stageout' [2023-07-05 16:28:02] 2023-07-05 14:27:20,252 | INFO | number of running child processes to parent process 19539: 1 [2023-07-05 16:28:02] 2023-07-05 14:27:20,253 | INFO | maximum number of monitored processes: 10 [2023-07-05 16:28:02] 2023-07-05 14:27:22,757 | INFO | monitor loop #202: job 0:5895972654 is in state 'stageout' [2023-07-05 16:28:02] 2023-07-05 14:27:22,795 | INFO | number of running child processes to parent process 19539: 1 [2023-07-05 16:28:02] 2023-07-05 14:27:22,796 | INFO | maximum number of monitored processes: 10 [2023-07-05 16:28:02] 2023-07-05 14:27:25,298 | INFO | monitor loop #203: job 0:5895972654 is in state 'stageout' [2023-07-05 16:28:02] 2023-07-05 14:27:25,331 | INFO | number of running child processes to parent process 19539: 1 [2023-07-05 16:28:02] 2023-07-05 14:27:25,331 | INFO | maximum number of monitored processes: 10 [2023-07-05 16:28:02] 2023-07-05 14:27:26,607 | INFO | [attempt=3/3] loading data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json [2023-07-05 16:28:02] 2023-07-05 14:27:26,715 | WARNING | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: [2023-07-05 16:28:02] 2023-07-05 14:27:26,715 | WARNING | cache file=/var/lib/boinc-client/slots/1/agis_ddmendpoints.agis.ALL.json is not available: [Errno 2] No such file or directory: '/var/lib/boinc-client/slots/1/agis [2023-07-05 16:28:02] 2023-07-05 14:27:26,762 | INFO | transferring file 53e8d949-35e4-4add-937d-beb42156d7bb_59019.1.job.log.tgz from /var/lib/boinc-client/slots/1/PanDA_Pilot-5895972654/53e8d949-35e4-4add-937d-beb421 [2023-07-05 16:28:02] 2023-07-05 14:27:26,762 | INFO | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/1/PanDA_Pilot-5895972654/53e8d949-35e4-4add-937d-beb42156d7bb_59019.1.job.log.tgz /var/lib/boinc-cli [2023-07-05 16:28:02] 2023-07-05 14:27:26,777 | INFO | Adding to output.list: 53e8d949-35e4-4add-937d-beb42156d7bb_59019.1.job.log.tgz davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/ca/32/53e8d949-35e4- [2023-07-05 16:28:02] 2023-07-05 14:27:26,778 | INFO | summary of transferred files: [2023-07-05 16:28:02] 2023-07-05 14:27:26,778 | INFO | -- lfn=53e8d949-35e4-4add-937d-beb42156d7bb_59019.1.job.log.tgz, status_code=0, status=transferred [2023-07-05 16:28:02] 2023-07-05 14:27:26,778 | INFO | stage-out finished correctly [2023-07-05 16:28:02] 2023-07-05 14:27:27,835 | INFO | monitor loop #204: job 0:5895972654 is in state 'finished' [2023-07-05 16:28:02] 2023-07-05 14:27:27,835 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-07-05 16:28:02] 2023-07-05 14:27:27,892 | INFO | finished stage-out for finished payload, adding job to finished_jobs queue [2023-07-05 16:28:02] 2023-07-05 14:27:30,130 | INFO | job 5895972654 has state=finished [2023-07-05 16:28:02] 2023-07-05 14:27:30,131 | INFO | preparing for final server update for job 5895972654 in state='finished' [2023-07-05 16:28:02] 2023-07-05 14:27:30,131 | INFO | this job has now completed (state=finished) [2023-07-05 16:28:02] 2023-07-05 14:27:30,132 | INFO | pilot will not update the server (heartbeat message will be written to file) [2023-07-05 16:28:02] 2023-07-05 14:27:30,132 | INFO | job 5895972654 has finished - writing final server update [2023-07-05 16:28:02] 2023-07-05 14:27:30,133 | WARNING | wrong length of table data, x=[1688566481.0, 1688566542.0, 1688566603.0, 1688566664.0, 1688566725.0], y=[1903186.0, 1922670.0, 1936973.0, 1813913.0, 1814349.0] (mu [2023-07-05 16:28:02] 2023-07-05 14:27:30,134 | INFO | total number of processed events: 2 (read) [2023-07-05 16:28:02] 2023-07-05 14:27:30,137 | INFO | executing command: lscpu [2023-07-05 16:28:02] 2023-07-05 14:27:30,153 | INFO | found 2 cores (1 cores per socket, 2 sockets) [2023-07-05 16:28:02] 2023-07-05 14:27:30,153 | INFO | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo [2023-07-05 16:28:02] 2023-07-05 14:27:30,178 | INFO | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup [2023-07-05 16:28:02] 2023-07-05 14:27:30,338 | INFO | monitor loop #205: job 0:5895972654 is in state 'finished' [2023-07-05 16:28:02] 2023-07-05 14:27:30,339 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-07-05 16:28:02] 2023-07-05 14:27:32,842 | INFO | monitor loop #206: job 0:5895972654 is in state 'finished' [2023-07-05 16:28:02] 2023-07-05 14:27:32,843 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-07-05 16:28:02] 2023-07-05 14:27:34,067 | INFO | 1271s have passed since pilot start [2023-07-05 16:28:02] 2023-07-05 14:27:35,348 | INFO | monitor loop #207: job 0:5895972654 is in state 'finished' [2023-07-05 16:28:02] 2023-07-05 14:27:35,349 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-07-05 16:28:02] 2023-07-05 14:27:37,852 | INFO | monitor loop #208: job 0:5895972654 is in state 'finished' [2023-07-05 16:28:02] 2023-07-05 14:27:37,852 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-07-05 16:28:02] 2023-07-05 14:27:40,221 | INFO | no CPU architecture reporting [2023-07-05 16:28:02] 2023-07-05 14:27:40,221 | INFO | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-5895972654/memory_monitor_summary.json (trf name=prmon) [2023-07-05 16:28:02] 2023-07-05 14:27:40,222 | INFO | extracted standard info from prmon json [2023-07-05 16:28:02] 2023-07-05 14:27:40,222 | INFO | extracted standard memory fields from prmon json [2023-07-05 16:28:02] 2023-07-05 14:27:40,223 | INFO | .............................. [2023-07-05 16:28:02] 2023-07-05 14:27:40,223 | INFO | . Timing measurements: [2023-07-05 16:28:02] 2023-07-05 14:27:40,223 | INFO | . get job = 65 s [2023-07-05 16:28:02] 2023-07-05 14:27:40,223 | INFO | . initial setup = 37 s [2023-07-05 16:28:02] 2023-07-05 14:27:40,223 | INFO | . payload setup = 6 s [2023-07-05 16:28:02] 2023-07-05 14:27:40,223 | INFO | . stage-in = 68 s [2023-07-05 16:28:02] 2023-07-05 14:27:40,223 | INFO | . payload execution = 696 s [2023-07-05 16:28:02] 2023-07-05 14:27:40,223 | INFO | . stage-out = 376 s [2023-07-05 16:28:02] 2023-07-05 14:27:40,223 | INFO | .............................. [2023-07-05 16:28:02] 2023-07-05 14:27:40,290 | INFO | [2023-07-05 16:28:02] 2023-07-05 14:27:40,290 | INFO | job summary report [2023-07-05 16:28:02] 2023-07-05 14:27:40,290 | INFO | -------------------------------------------------- [2023-07-05 16:28:02] 2023-07-05 14:27:40,290 | INFO | PanDA job id: 5895972654 [2023-07-05 16:28:02] 2023-07-05 14:27:40,290 | INFO | task id: NULL [2023-07-05 16:28:02] 2023-07-05 14:27:40,290 | INFO | errors: (none) [2023-07-05 16:28:02] 2023-07-05 14:27:40,290 | INFO | status: LOG_TRANSFER = DONE [2023-07-05 16:28:02] 2023-07-05 14:27:40,291 | INFO | pilot state: finished [2023-07-05 16:28:02] 2023-07-05 14:27:40,291 | INFO | transexitcode: 0 [2023-07-05 16:28:02] 2023-07-05 14:27:40,291 | INFO | exeerrorcode: 0 [2023-07-05 16:28:02] 2023-07-05 14:27:40,291 | INFO | exeerrordiag: [2023-07-05 16:28:02] 2023-07-05 14:27:40,291 | INFO | exitcode: 0 [2023-07-05 16:28:02] 2023-07-05 14:27:40,291 | INFO | exitmsg: OK [2023-07-05 16:28:02] 2023-07-05 14:27:40,291 | INFO | cpuconsumptiontime: 820 s [2023-07-05 16:28:02] 2023-07-05 14:27:40,291 | INFO | nevents: 2 [2023-07-05 16:28:02] 2023-07-05 14:27:40,291 | INFO | neventsw: 0 [2023-07-05 16:28:02] 2023-07-05 14:27:40,291 | INFO | pid: 19539 [2023-07-05 16:28:02] 2023-07-05 14:27:40,291 | INFO | pgrp: 19539 [2023-07-05 16:28:02] 2023-07-05 14:27:40,291 | INFO | corecount: 2 [2023-07-05 16:28:02] 2023-07-05 14:27:40,291 | INFO | event service: False [2023-07-05 16:28:02] 2023-07-05 14:27:40,292 | INFO | sizes: {0: 2486491, 11: 2486637, 22: 2486665, 32: 2486693, 43: 2486721, 53: 2486749, 64: 2486905, 72: 2487021, 75: 2487049, 706: 2509913, 1082: 2519237, 1084: 2519 [2023-07-05 16:28:02] 2023-07-05 14:27:40,292 | INFO | -------------------------------------------------- [2023-07-05 16:28:02] 2023-07-05 14:27:40,292 | INFO | [2023-07-05 16:28:02] 2023-07-05 14:27:40,292 | INFO | executing command: ls -lF /var/lib/boinc-client/slots/1 [2023-07-05 16:28:02] 2023-07-05 14:27:40,310 | INFO | queue jobs had 0 job(s) [purged] [2023-07-05 16:28:02] 2023-07-05 14:27:40,310 | INFO | queue payloads had 0 job(s) [purged] [2023-07-05 16:28:02] 2023-07-05 14:27:40,310 | INFO | queue data_in had 0 job(s) [purged] [2023-07-05 16:28:02] 2023-07-05 14:27:40,311 | INFO | queue data_out had 0 job(s) [purged] [2023-07-05 16:28:02] 2023-07-05 14:27:40,311 | INFO | queue current_data_in had 0 job(s) [purged] [2023-07-05 16:28:02] 2023-07-05 14:27:40,311 | INFO | queue validated_jobs had 0 job(s) [purged] [2023-07-05 16:28:02] 2023-07-05 14:27:40,311 | INFO | queue validated_payloads had 0 job(s) [purged] [2023-07-05 16:28:02] 2023-07-05 14:27:40,311 | INFO | queue monitored_payloads had 0 job(s) [purged] [2023-07-05 16:28:02] 2023-07-05 14:27:40,311 | INFO | queue finished_jobs had 0 job(s) [purged] [2023-07-05 16:28:02] 2023-07-05 14:27:40,311 | INFO | queue finished_payloads had 0 job(s) [purged] [2023-07-05 16:28:02] 2023-07-05 14:27:40,312 | INFO | queue finished_data_in had 1 job(s) [purged] [2023-07-05 16:28:02] 2023-07-05 14:27:40,312 | INFO | queue finished_data_out had 0 job(s) [purged] [2023-07-05 16:28:02] 2023-07-05 14:27:40,312 | INFO | queue failed_jobs had 0 job(s) [purged] [2023-07-05 16:28:02] 2023-07-05 14:27:40,312 | INFO | queue failed_payloads had 0 job(s) [purged] [2023-07-05 16:28:02] 2023-07-05 14:27:40,312 | INFO | queue failed_data_in had 0 job(s) [purged] [2023-07-05 16:28:02] 2023-07-05 14:27:40,312 | INFO | queue failed_data_out had 0 job(s) [purged] [2023-07-05 16:28:02] 2023-07-05 14:27:40,312 | INFO | queue completed_jobs had 0 job(s) [purged] [2023-07-05 16:28:02] 2023-07-05 14:27:40,312 | INFO | queue completed_jobids has 1 job(s) [2023-07-05 16:28:02] 2023-07-05 14:27:40,312 | INFO | queue realtimelog_payloads had 0 job(s) [purged] [2023-07-05 16:28:02] 2023-07-05 14:27:40,313 | INFO | queue messages had 0 job(s) [purged] [2023-07-05 16:28:02] 2023-07-05 14:27:40,313 | INFO | job 5895972654 has completed (purged errors) [2023-07-05 16:28:02] 2023-07-05 14:27:40,313 | INFO | overall cleanup function is called [2023-07-05 16:28:02] 2023-07-05 14:27:41,322 | INFO | --- collectZombieJob: --- 10, [19539] [2023-07-05 16:28:02] 2023-07-05 14:27:41,323 | INFO | zombie collector trying to kill pid 19539 [2023-07-05 16:28:02] 2023-07-05 14:27:41,323 | INFO | harmless exception when collecting zombies: [Errno 10] No child processes [2023-07-05 16:28:02] 2023-07-05 14:27:42,328 | INFO | collected zombie processes [2023-07-05 16:28:02] 2023-07-05 14:27:42,329 | INFO | will now attempt to kill all subprocesses of pid=19539 [2023-07-05 16:28:02] 2023-07-05 14:27:42,354 | INFO | process IDs to be killed: [19539] (in reverse order) [2023-07-05 16:28:02] 2023-07-05 14:27:42,379 | WARNING | found no corresponding commands to process id(s) [2023-07-05 16:28:02] 2023-07-05 14:27:42,379 | INFO | Do not look for orphan processes in BOINC jobs [2023-07-05 16:28:02] 2023-07-05 14:27:42,380 | INFO | ready for new job [2023-07-05 16:28:02] 2023-07-05 14:27:42,380 | INFO | pilot has finished with previous job - re-establishing logging [2023-07-05 16:28:02] 2023-07-05 14:27:42,381 | INFO | **************************************** [2023-07-05 16:28:02] 2023-07-05 14:27:42,381 | INFO | *** PanDA Pilot version 3.6.1 (31) *** [2023-07-05 16:28:02] 2023-07-05 14:27:42,381 | INFO | **************************************** [2023-07-05 16:28:02] 2023-07-05 14:27:42,381 | INFO | [2023-07-05 16:28:02] 2023-07-05 14:27:42,382 | INFO | pilot is running in a VM [2023-07-05 16:28:02] 2023-07-05 14:27:42,382 | INFO | architecture information: [2023-07-05 16:28:02] 2023-07-05 14:27:42,382 | INFO | executing command: cat /etc/os-release [2023-07-05 16:28:02] 2023-07-05 14:27:42,397 | INFO | cat /etc/os-release: [2023-07-05 16:28:02] NAME="CentOS Linux" [2023-07-05 16:28:02] VERSION="7 (Core)" [2023-07-05 16:28:02] ID="centos" [2023-07-05 16:28:02] ID_LIKE="rhel fedora" [2023-07-05 16:28:02] VERSION_ID="7" [2023-07-05 16:28:02] PRETTY_NAME="CentOS Linux 7 (Core)" [2023-07-05 16:28:02] ANSI_COLOR="0;31" [2023-07-05 16:28:02] CPE_NAME="cpe:/o:centos:centos:7" [2023-07-05 16:28:02] HOME_URL="https://www.centos.org/" [2023-07-05 16:28:02] BUG_REPORT_URL="https://bugs.centos.org/" [2023-07-05 16:28:02] [2023-07-05 16:28:02] CENTOS_MANTISBT_PROJECT="CentOS-7" [2023-07-05 16:28:02] CENTOS_MANTISBT_PROJECT_VERSION="7" [2023-07-05 16:28:02] REDHAT_SUPPORT_PRODUCT="centos" [2023-07-05 16:28:02] REDHAT_SUPPORT_PRODUCT_VERSION="7" [2023-07-05 16:28:02] [2023-07-05 16:28:02] 2023-07-05 14:27:42,397 | INFO | **************************************** [2023-07-05 16:28:02] 2023-07-05 14:27:42,898 | INFO | executing command: df -mP /var/lib/boinc-client/slots/1 [2023-07-05 16:28:02] 2023-07-05 14:27:42,917 | INFO | sufficient remaining disk space (57309921280 B) [2023-07-05 16:28:02] 2023-07-05 14:27:42,918 | WARNING | since timefloor is set to 0, pilot was only allowed to run one job [2023-07-05 16:28:02] 2023-07-05 14:27:42,918 | WARNING | setting graceful_stop since proceed_with_getjob() returned False (pilot will end) [2023-07-05 16:28:02] 2023-07-05 14:27:42,918 | WARNING | data:copytool_out:received graceful stop - abort after this iteration [2023-07-05 16:28:02] 2023-07-05 14:27:42,974 | WARNING | data:queue_monitoring:received graceful stop - abort after this iteration [2023-07-05 16:28:02] 2023-07-05 14:27:43,093 | INFO | found 0 job(s) in 20 queues [2023-07-05 16:28:02] 2023-07-05 14:27:43,093 | WARNING | pilot monitor received instruction that args.graceful_stop has been set [2023-07-05 16:28:02] 2023-07-05 14:27:43,093 | WARNING | will wait for a maximum of 300 s for threads to finish [2023-07-05 16:28:02] 2023-07-05 14:27:43,866 | WARNING | job:job_monitor:received graceful stop - abort after this iteration [2023-07-05 16:28:02] 2023-07-05 14:27:43,866 | INFO | aborting loop [2023-07-05 16:28:02] 2023-07-05 14:27:43,920 | INFO | [job] retrieve thread has finished [2023-07-05 16:28:02] 2023-07-05 14:27:44,067 | INFO | [payload] validate_post thread has finished [2023-07-05 16:28:02] 2023-07-05 14:27:44,247 | INFO | [payload] failed_post thread has finished [2023-07-05 16:28:02] 2023-07-05 14:27:44,425 | INFO | [payload] control thread has finished [2023-07-05 16:28:02] 2023-07-05 14:27:44,603 | INFO | [job] control thread has finished [2023-07-05 16:28:02] 2023-07-05 14:27:44,604 | INFO | [data] copytool_in thread has finished [2023-07-05 16:28:02] 2023-07-05 14:27:44,626 | INFO | [job] validate thread has finished [2023-07-05 16:28:02] 2023-07-05 14:27:44,783 | INFO | [data] control thread has finished [2023-07-05 16:28:02] 2023-07-05 14:27:44,839 | INFO | [job] create_data_payload thread has finished [2023-07-05 16:28:02] 2023-07-05 14:27:44,872 | INFO | [job] job monitor thread has finished [2023-07-05 16:28:02] 2023-07-05 14:27:44,924 | INFO | [data] copytool_out thread has finished [2023-07-05 16:28:02] 2023-07-05 14:27:44,994 | INFO | [payload] execute_payloads thread has finished [2023-07-05 16:28:02] 2023-07-05 14:27:45,046 | INFO | [payload] validate_pre thread has finished [2023-07-05 16:28:02] 2023-07-05 14:27:45,298 | WARNING | job:queue_monitor:received graceful stop - abort after this iteration [2023-07-05 16:28:02] 2023-07-05 14:27:46,303 | INFO | [job] queue monitor thread has finished [2023-07-05 16:28:02] 2023-07-05 14:27:46,980 | INFO | [data] queue_monitor thread has finished [2023-07-05 16:28:02] 2023-07-05 14:27:53,698 | INFO | job.realtimelogging is not enabled [2023-07-05 16:28:02] 2023-07-05 14:27:54,703 | INFO | [payload] run_realtimelog thread has finished [2023-07-05 16:28:02] 2023-07-05 14:27:56,340 | INFO | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140456152753984)>', '<ExcThread(monitor, started 140455882774272)>'] [2023-07-05 16:28:02] 2023-07-05 14:27:57,143 | WARNING | job_aborted has been set - aborting pilot monitoring [2023-07-05 16:28:02] 2023-07-05 14:27:57,143 | INFO | [monitor] control thread has ended [2023-07-05 16:28:02] 2023-07-05 14:28:01,364 | INFO | end of generic workflow (traces error code: 0) [2023-07-05 16:28:02] 2023-07-05 14:28:01,365 | INFO | traces error code: 0 [2023-07-05 16:28:02] 2023-07-05 14:28:01,365 | INFO | pilot has finished (exit code=0, shell exit code=0) [2023-07-05 16:28:02] 2023-07-05 14:28:01,434 [wrapper] ==== pilot stdout END ==== [2023-07-05 16:28:02] 2023-07-05 14:28:01,437 [wrapper] ==== wrapper stdout RESUME ==== [2023-07-05 16:28:02] 2023-07-05 14:28:01,438 [wrapper] pilotpid: 12029 [2023-07-05 16:28:02] 2023-07-05 14:28:01,440 [wrapper] Pilot exit status: 0 [2023-07-05 16:28:02] 2023-07-05 14:28:01,452 [wrapper] pandaids: 5895972654 [2023-07-05 16:28:02] 2023-07-05 14:28:01,457 [wrapper] apfmon messages muted [2023-07-05 16:28:02] 2023-07-05 14:28:01,459 [wrapper] Test setup, not cleaning [2023-07-05 16:28:02] 2023-07-05 14:28:01,461 [wrapper] ==== wrapper stdout END ==== [2023-07-05 16:28:02] 2023-07-05 14:28:01,463 [wrapper] ==== wrapper stderr END ==== [2023-07-05 16:28:02] 2023-07-05 14:28:01,466 [wrapper] wrapperexiting ec=0, duration=1304 [2023-07-05 16:28:02] 2023-07-05 14:28:01,468 [wrapper] apfmon messages muted [2023-07-05 16:28:02] *** Error codes and diagnostics *** [2023-07-05 16:28:02] "exeErrorCode": 0, [2023-07-05 16:28:02] "exeErrorDiag": "", [2023-07-05 16:28:02] "pilotErrorCode": 0, [2023-07-05 16:28:02] "pilotErrorDiag": "", [2023-07-05 16:28:02] *** Listing of results directory *** [2023-07-05 16:28:02] total 45376 [2023-07-05 16:28:02] -rw-r--r-- 1 boinc boinc 410964 Jul 5 14:40 pilot3.tar.gz [2023-07-05 16:28:02] -rwx------ 1 boinc boinc 27010 Jul 5 15:07 runpilot2-wrapper.sh [2023-07-05 16:28:02] -rw-r--r-- 1 boinc boinc 4388 Jul 5 15:07 queuedata.json [2023-07-05 16:28:02] -rw-r--r-- 1 boinc boinc 107 Jul 5 16:06 wrapper_26015_x86_64-pc-linux-gnu [2023-07-05 16:28:02] -rwxr-xr-x 1 boinc boinc 7986 Jul 5 16:06 run_atlas [2023-07-05 16:28:02] -rw-r--r-- 1 boinc boinc 112 Jul 5 16:06 job.xml [2023-07-05 16:28:02] -rw-r--r-- 2 boinc boinc 17624 Jul 5 16:06 start_atlas.sh [2023-07-05 16:28:02] drwxrwx--x 2 boinc boinc 4096 Jul 5 16:06 shared [2023-07-05 16:28:02] -rw-r--r-- 2 boinc boinc 422291 Jul 5 16:06 input.tar.gz [2023-07-05 16:28:02] -rw-r--r-- 1 boinc boinc 6142 Jul 5 16:06 init_data.xml [2023-07-05 16:28:02] -rw-r--r-- 2 boinc boinc 37658468 Jul 5 16:06 EVNT.04972714._000029.pool.root.1 [2023-07-05 16:28:02] -rw-r--r-- 1 boinc boinc 0 Jul 5 16:06 boinc_lockfile [2023-07-05 16:28:02] -rw-r--r-- 1 boinc boinc 2756 Jul 5 16:06 pandaJob.out [2023-07-05 16:28:02] -rw------- 1 boinc boinc 424 Jul 5 16:06 setup.sh.local [2023-07-05 16:28:02] -rw------- 1 boinc boinc 1013862 Jul 5 16:06 agis_schedconf.cvmfs.json [2023-07-05 16:28:02] -rw------- 1 boinc boinc 1390398 Jul 5 16:06 cric_ddmendpoints.json [2023-07-05 16:28:02] drwx------ 4 boinc boinc 4096 Jul 5 16:08 pilot3 [2023-07-05 16:28:02] -rw-r--r-- 1 boinc boinc 532 Jul 5 16:18 boinc_task_state.xml [2023-07-05 16:28:02] -rw------- 1 boinc boinc 2055404 Jul 5 16:21 output.1.53e8d949-35e4-4add-937d-beb42156d7bb_59019.pool.root [2023-07-05 16:28:02] -rw------- 1 boinc boinc 1015 Jul 5 16:21 memory_monitor_summary.json [2023-07-05 16:28:02] -rw------- 1 boinc boinc 434057 Jul 5 16:24 53e8d949-35e4-4add-937d-beb42156d7bb_59019.1.job.log.tgz [2023-07-05 16:28:02] -rw-r--r-- 1 boinc boinc 8192 Jul 5 16:27 boinc_mmap_file [2023-07-05 16:28:02] -rw-r--r-- 1 boinc boinc 25 Jul 5 16:27 wrapper_checkpoint.txt [2023-07-05 16:28:02] -rw------- 1 boinc boinc 7859 Jul 5 16:27 heartbeat.json [2023-07-05 16:28:02] -rw------- 1 boinc boinc 4050 Jul 5 16:28 pilotlog.txt [2023-07-05 16:28:02] -rw------- 1 boinc boinc 188082 Jul 5 16:28 53e8d949-35e4-4add-937d-beb42156d7bb_59019.1.job.log [2023-07-05 16:28:02] -rw------- 1 boinc boinc 464 Jul 5 16:28 output.list [2023-07-05 16:28:02] -rw-r--r-- 1 boinc boinc 748 Jul 5 16:28 runtime_log [2023-07-05 16:28:02] -rw------- 1 boinc boinc 2693120 Jul 5 16:28 result.tar.gz [2023-07-05 16:28:02] -rw-r--r-- 1 boinc boinc 12121 Jul 5 16:28 runtime_log.err [2023-07-05 16:28:02] -rw------- 1 boinc boinc 629 Jul 5 16:28 JMZNDm8OHb3n7Olcko1bjSoqABFKDmABFKDm7AsVDmwnMKDmaUfIjm.diag [2023-07-05 16:28:02] -rw-r--r-- 1 boinc boinc 23106 Jul 5 16:28 stderr.txt [2023-07-05 16:28:02] HITS file was successfully produced: [2023-07-05 16:28:02] -rw------- 1 boinc boinc 2055404 Jul 5 16:21 shared/HITS.pool.root.1 [2023-07-05 16:28:02] *** Contents of shared directory: *** [2023-07-05 16:28:02] total 41852 [2023-07-05 16:28:02] -rw-r--r-- 2 boinc boinc 17624 Jul 5 16:06 start_atlas.sh [2023-07-05 16:28:02] -rw-r--r-- 2 boinc boinc 422291 Jul 5 16:06 input.tar.gz [2023-07-05 16:28:02] -rw-r--r-- 2 boinc boinc 37658468 Jul 5 16:06 ATLAS.root_0 [2023-07-05 16:28:02] -rw------- 1 boinc boinc 2055404 Jul 5 16:21 HITS.pool.root.1 [2023-07-05 16:28:02] -rw------- 1 boinc boinc 2693120 Jul 5 16:28 result.tar.gz 16:28:04 (8896): run_atlas exited; CPU time 809.355814 16:28:04 (8896): called boinc_finish(0) </stderr_txt> ]]>
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