| Name | JCaKDmixLe3n7Olcko1bjSoqABFKDmABFKDm7AsVDm7FNKDmAZXsen_0 |
| Workunit | 2318204 |
| Created | 14 Jul 2023, 0:35:41 UTC |
| Sent | 14 Jul 2023, 0:38:08 UTC |
| Report deadline | 21 Jul 2023, 0:38:08 UTC |
| Received | 14 Jul 2023, 1:02:05 UTC |
| Server state | Over |
| Outcome | Success |
| Client state | Done |
| Exit status | 0 (0x00000000) |
| Computer ID | 1498 |
| Run time | 21 min 26 sec |
| CPU time | 1 min 23 sec |
| Validate state | Valid |
| Credit | 14.52 |
| Device peak FLOPS | 13.02 GFLOPS |
| Application version | ATLAS Simulation v3.01 (native_mt) x86_64-pc-linux-gnu |
| Peak working set size | 1.00 GB |
| Peak swap size | 1.60 GB |
| Peak disk usage | 80.88 MB |
Stderr output
<core_client_version>7.4.25</core_client_version>
<![CDATA[
<stderr_txt>
01:39:22 (2833): wrapper (7.7.26015): starting
01:39:22 (2833): wrapper: running run_atlas (--nthreads 4)
[2023-07-14 01:39:22] Arguments: --nthreads 4
[2023-07-14 01:39:22] Threads: 4
[2023-07-14 01:39:22] Checking for CVMFS
[2023-07-14 01:39:27] Probing /cvmfs/atlas.cern.ch... OK
[2023-07-14 01:39:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2023-07-14 01:39:32] Running cvmfs_config stat atlas.cern.ch
[2023-07-14 01:39:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2023-07-14 01:39:32] 2.9.0.0 3054 0 24644 121247 3 1 2619919 4194304 0 130560 0 0 0.000 829 290 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.100.152:3128 1
[2023-07-14 01:39:32] CVMFS is ok
[2023-07-14 01:39:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2023-07-14 01:39:32] Checking for apptainer binary...
[2023-07-14 01:39:32] Using apptainer found in PATH at /usr/bin/apptainer
[2023-07-14 01:39:32] Running /usr/bin/apptainer --version
[2023-07-14 01:39:33] apptainer version 1.0.3
[2023-07-14 01:39:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2023-07-14 01:39:34] TeeC16
[2023-07-14 01:39:34] apptainer works
[2023-07-14 01:39:34] Set ATHENA_PROC_NUMBER=4
[2023-07-14 01:39:34] Set ATHENA_CORE_NUMBER=4
[2023-07-14 01:39:34] Starting ATLAS job with PandaID=5903375784
[2023-07-14 01:39:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/m/BOINC/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2023-07-14 02:00:45] *** The last 200 lines of the pilot log: ***
[2023-07-14 02:00:45] 2023-07-14 01:00:12,481 | INFO | monitor loop #197: job 0:5903375784 is in state 'failed'
[2023-07-14 02:00:45] 2023-07-14 01:00:12,481 | INFO | will abort job monitoring soon since job state=failed (job is still in queue)
[2023-07-14 02:00:45] 2023-07-14 01:00:14,984 | INFO | monitor loop #198: job 0:5903375784 is in state 'failed'
[2023-07-14 02:00:45] 2023-07-14 01:00:14,985 | INFO | will abort job monitoring soon since job state=failed (job is still in queue)
[2023-07-14 02:00:45] 2023-07-14 01:00:17,487 | INFO | monitor loop #199: job 0:5903375784 is in state 'failed'
[2023-07-14 02:00:45] 2023-07-14 01:00:17,488 | INFO | will abort job monitoring soon since job state=failed (job is still in queue)
[2023-07-14 02:00:45] 2023-07-14 01:00:19,991 | INFO | monitor loop #200: job 0:5903375784 is in state 'failed'
[2023-07-14 02:00:45] 2023-07-14 01:00:19,991 | INFO | will abort job monitoring soon since job state=failed (job is still in queue)
[2023-07-14 02:00:45] 2023-07-14 01:00:22,494 | INFO | monitor loop #201: job 0:5903375784 is in state 'failed'
[2023-07-14 02:00:45] 2023-07-14 01:00:22,495 | INFO | will abort job monitoring soon since job state=failed (job is still in queue)
[2023-07-14 02:00:45] 2023-07-14 01:00:22,942 | INFO | no CPU architecture reporting
[2023-07-14 02:00:45] 2023-07-14 01:00:22,942 | INFO | using path: /home/m/BOINC/slots/0/PanDA_Pilot-5903375784/memory_monitor_summary.json (trf name=prmon)
[2023-07-14 02:00:45] 2023-07-14 01:00:22,943 | INFO | extracted standard info from prmon json
[2023-07-14 02:00:45] 2023-07-14 01:00:22,943 | INFO | extracted standard memory fields from prmon json
[2023-07-14 02:00:45] 2023-07-14 01:00:22,943 | INFO | ..............................
[2023-07-14 02:00:45] 2023-07-14 01:00:22,943 | INFO | . Timing measurements:
[2023-07-14 02:00:45] 2023-07-14 01:00:22,943 | INFO | . get job = 69 s
[2023-07-14 02:00:45] 2023-07-14 01:00:22,943 | INFO | . initial setup = 59 s
[2023-07-14 02:00:45] 2023-07-14 01:00:22,943 | INFO | . payload setup = 56 s
[2023-07-14 02:00:45] 2023-07-14 01:00:22,943 | INFO | . stage-in = 55 s
[2023-07-14 02:00:45] 2023-07-14 01:00:22,944 | INFO | . payload execution = 604 s
[2023-07-14 02:00:45] 2023-07-14 01:00:22,944 | INFO | . stage-out = 192 s
[2023-07-14 02:00:45] 2023-07-14 01:00:22,944 | INFO | ..............................
[2023-07-14 02:00:45] 2023-07-14 01:00:22,944 | INFO | building log extracts (sent to the server as 'pilotLog')
[2023-07-14 02:00:45] 2023-07-14 01:00:22,944 | INFO | executing command: tail -n 20 /home/m/BOINC/slots/0/PanDA_Pilot-5903375784/pilotlog.txt
[2023-07-14 02:00:45] 2023-07-14 01:00:22,955 | WARNING | detected the following tail of warning/fatal messages in the pilot log:
[2023-07-14 02:00:45] - Log from pilotlog.txt -
[2023-07-14 02:00:45] 2023-07-14 01:00:17,488 | INFO | will abort job monitoring soon since job state=failed (job is still in queue)
[2023-07-14 02:00:45] 2023-07-14 01:00:19,991 | INFO | monitor loop #200: job 0:5903375784 is in state 'failed'
[2023-07-14 02:00:45] 2023-07-14 01:00:19,991 | INFO | will abort job monitoring soon since job state=failed (job is still in queue)
[2023-07-14 02:00:45] 2023-07-14 01:00:22,494 | INFO | monitor loop #201: job 0:5903375784 is in state 'failed'
[2023-07-14 02:00:45] 2023-07-14 01:00:22,495 | INFO | will abort job monitoring soon since job state=failed (job is still in queue)
[2023-07-14 02:00:45] 2023-07-14 01:00:22,942 | INFO | no CPU architecture reporting
[2023-07-14 02:00:45] 2023-07-14 01:00:22,942 | INFO | using path: /home/m/BOINC/slots/0/PanDA_Pilot-5903375784/memory_monitor_summary.json (trf name=prmon)
[2023-07-14 02:00:45] 2023-07-14 01:00:22,943 | INFO | extracted standard info from prmon json
[2023-07-14 02:00:45] 2023-07-14 01:00:22,943 | INFO | extracted standard memory fields from prmon json
[2023-07-14 02:00:45] 2023-07-14 01:00:22,943 | INFO | ..............................
[2023-07-14 02:00:45] 2023-07-14 01:00:22,943 | INFO | . Timing measurements:
[2023-07-14 02:00:45] 2023-07-14 01:00:22,943 | INFO | . get job = 69 s
[2023-07-14 02:00:45] 2023-07-14 01:00:22,943 | INFO | . initial setup = 59 s
[2023-07-14 02:00:45] 2023-07-14 01:00:22,943 | INFO | . payload setup = 56 s
[2023-07-14 02:00:45] 2023-07-14 01:00:22,943 | INFO | . stage-in = 55 s
[2023-07-14 02:00:45] 2023-07-14 01:00:22,944 | INFO | . payload execution = 604 s
[2023-07-14 02:00:45] 2023-07-14 01:00:22,944 | INFO | . stage-out = 192 s
[2023-07-14 02:00:45] 2023-07-14 01:00:22,944 | INFO | ..............................
[2023-07-14 02:00:45] 2023-07-14 01:00:22,944 | INFO | building log extracts (sent to the server as 'pilotLog')
[2023-07-14 02:00:45] 2023-07-14 01:00:22,944 | INFO | executing command: tail -n 20 /home/m/BOINC/slots/0/PanDA_Pilot-5903375784/pilotlog.txt
[2023-07-14 02:00:45] 2023-07-14 01:00:22,955 | WARNING |
[2023-07-14 02:00:45] [begin log extracts]
[2023-07-14 02:00:45] - Log from pilotlog.txt -
[2023-07-14 02:00:45] 2023-07-14 01:00:17,488 | INFO | will abort job monitoring soon since job state=failed (job is still in queue)
[2023-07-14 02:00:45] 2023-07-14 01:00:19,991 | INFO | monitor loop #200: job 0:5903375784 is in state 'failed'
[2023-07-14 02:00:45] 2023-07-14 01:00:19,991 | INFO | will abort job monitoring soon since job state=failed (job is still in queue)
[2023-07-14 02:00:45] 2023-07-14 01:00:22,494 | INFO | monitor loop #201: job 0:5903375784 is in state 'failed'
[2023-07-14 02:00:45] 2023-07-14 01:00:22,495 | INFO | will abort job monitoring soon since job state=failed (job is still in queue)
[2023-07-14 02:00:45] 2023-07-14 01:00:22,942 | INFO | no CPU architecture reporting
[2023-07-14 02:00:45] 2023-07-14 01:00:22,942 | INFO | using path: /home/m/BOINC/slots/0/PanDA_Pilot-5903375784/memory_monitor_summary.json (trf name=prmon)
[2023-07-14 02:00:45] 2023-07-14 01:00:22,943 | INFO | extracted standard info from prmon json
[2023-07-14 02:00:45] 2023-07-14 01:00:22,943 | INFO | extracted standard memory fields from prmon json
[2023-07-14 02:00:45] 2023-07-14 01:00:22,943 | INFO | ..............................
[2023-07-14 02:00:45] 2023-07-14 01:00:22,943 | INFO | . Timing measurements:
[2023-07-14 02:00:45] 2023-07-14 01:00:22,943 | INFO | . get job = 69 s
[2023-07-14 02:00:45] 2023-07-14 01:00:22,943 | INFO | . initial setup = 59 s
[2023-07-14 02:00:45] 2023-07-14 01:00:22,943 | INFO | . payload setup = 56 s
[2023-07-14 02:00:45] 2023-07-14 01:00:22,943 | INFO | . stage-in = 55 s
[2023-07-14 02:00:45] 2023-07-14 01:00:22,944 | INFO | . payload execution = 604 s
[2023-07-14 02:00:45] 2023-07-14 01:00:22,944 | INFO | . stage-out = 192 s
[2023-07-14 02:00:45] 2023-07-14 01:00:22,944 | INFO | ..............................
[2023-07-14 02:00:45] 2023-07-14 01:00:22,944 | INFO | building log extracts (sent to the server as 'pilotLog')
[2023-07-14 02:00:45] 2023-07-14 01:00:22,944 | INFO | executing command: tail -n 20 /home/m/BOINC/slots/0/PanDA_Pilot-5903375784/pilotlog.txt
[2023-07-14 02:00:45] [end log extracts]
[2023-07-14 02:00:45] 2023-07-14 01:00:22,955 | WARNING | pilotErrorCodes = [1305] (will report primary/first error code)
[2023-07-14 02:00:45] 2023-07-14 01:00:22,955 | WARNING | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute 2023-07-14 01:54:54,179 CRITICAL Transform executor raised TransformValidationExcep
[2023-07-14 02:00:45] 2023-07-14 01:00:23,015 | INFO |
[2023-07-14 02:00:45] 2023-07-14 01:00:23,015 | INFO | job summary report
[2023-07-14 02:00:45] 2023-07-14 01:00:23,015 | INFO | --------------------------------------------------
[2023-07-14 02:00:45] 2023-07-14 01:00:23,015 | INFO | PanDA job id: 5903375784
[2023-07-14 02:00:45] 2023-07-14 01:00:23,015 | INFO | task id: NULL
[2023-07-14 02:00:45] 2023-07-14 01:00:23,015 | INFO | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2023-07-14 01:54:54,179 CRITICAL Transform executor raised TransformValidationExceptio
[2023-07-14 02:00:45] 2023-07-14 01:00:23,016 | INFO | status: LOG_TRANSFER = DONE
[2023-07-14 02:00:45] 2023-07-14 01:00:23,016 | INFO | pilot state: failed
[2023-07-14 02:00:45] 2023-07-14 01:00:23,016 | INFO | transexitcode: 65
[2023-07-14 02:00:45] 2023-07-14 01:00:23,016 | INFO | exeerrorcode: 65
[2023-07-14 02:00:45] 2023-07-14 01:00:23,016 | INFO | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "Segmentation fault: Event counter: 0; Run: unknown; Evt: unknown; Curren
[2023-07-14 02:00:45] 2023-07-14 01:00:23,016 | INFO | exitcode: 65
[2023-07-14 02:00:45] 2023-07-14 01:00:23,016 | INFO | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "Segmentation fault: Event counter: 0; Run: unknown; Evt: unknown; Current alg
[2023-07-14 02:00:45] 2023-07-14 01:00:23,016 | INFO | cpuconsumptiontime: 93 s
[2023-07-14 02:00:45] 2023-07-14 01:00:23,016 | INFO | nevents: 0
[2023-07-14 02:00:45] 2023-07-14 01:00:23,016 | INFO | neventsw: 0
[2023-07-14 02:00:45] 2023-07-14 01:00:23,016 | INFO | pid: 13810
[2023-07-14 02:00:45] 2023-07-14 01:00:23,017 | INFO | pgrp: 13810
[2023-07-14 02:00:45] 2023-07-14 01:00:23,017 | INFO | corecount: 4
[2023-07-14 02:00:45] 2023-07-14 01:00:23,017 | INFO | event service: False
[2023-07-14 02:00:45] 2023-07-14 01:00:23,017 | INFO | sizes: {0: 2462553, 1: 2462752, 11: 2462898, 22: 2462926, 33: 2462954, 43: 2462982, 54: 2463138, 60: 2463226, 64: 2463254, 663: 2467467, 664: 2489478, 856: 2490930
[2023-07-14 02:00:45] 2023-07-14 01:00:23,017 | INFO | --------------------------------------------------
[2023-07-14 02:00:45] 2023-07-14 01:00:23,017 | INFO |
[2023-07-14 02:00:45] 2023-07-14 01:00:23,017 | INFO | executing command: ls -lF /home/m/BOINC/slots/0
[2023-07-14 02:00:45] 2023-07-14 01:00:23,034 | INFO | queue jobs had 0 job(s) [purged]
[2023-07-14 02:00:45] 2023-07-14 01:00:23,034 | INFO | queue payloads had 0 job(s) [purged]
[2023-07-14 02:00:45] 2023-07-14 01:00:23,034 | INFO | queue data_in had 0 job(s) [purged]
[2023-07-14 02:00:45] 2023-07-14 01:00:23,034 | INFO | queue data_out had 0 job(s) [purged]
[2023-07-14 02:00:45] 2023-07-14 01:00:23,034 | INFO | queue current_data_in had 0 job(s) [purged]
[2023-07-14 02:00:45] 2023-07-14 01:00:23,035 | INFO | queue validated_jobs had 0 job(s) [purged]
[2023-07-14 02:00:45] 2023-07-14 01:00:23,035 | INFO | queue validated_payloads had 0 job(s) [purged]
[2023-07-14 02:00:45] 2023-07-14 01:00:23,035 | INFO | queue monitored_payloads had 0 job(s) [purged]
[2023-07-14 02:00:45] 2023-07-14 01:00:23,035 | INFO | queue finished_jobs had 0 job(s) [purged]
[2023-07-14 02:00:45] 2023-07-14 01:00:23,035 | INFO | queue finished_payloads had 0 job(s) [purged]
[2023-07-14 02:00:45] 2023-07-14 01:00:23,035 | INFO | queue finished_data_in had 1 job(s) [purged]
[2023-07-14 02:00:45] 2023-07-14 01:00:23,035 | INFO | queue finished_data_out had 0 job(s) [purged]
[2023-07-14 02:00:45] 2023-07-14 01:00:23,035 | INFO | queue failed_jobs had 0 job(s) [purged]
[2023-07-14 02:00:45] 2023-07-14 01:00:23,035 | INFO | queue failed_payloads had 0 job(s) [purged]
[2023-07-14 02:00:45] 2023-07-14 01:00:23,036 | INFO | queue failed_data_in had 0 job(s) [purged]
[2023-07-14 02:00:45] 2023-07-14 01:00:23,036 | INFO | queue failed_data_out had 0 job(s) [purged]
[2023-07-14 02:00:45] 2023-07-14 01:00:23,036 | INFO | queue completed_jobs had 0 job(s) [purged]
[2023-07-14 02:00:45] 2023-07-14 01:00:23,036 | INFO | queue completed_jobids has 1 job(s)
[2023-07-14 02:00:45] 2023-07-14 01:00:23,036 | INFO | queue realtimelog_payloads had 0 job(s) [purged]
[2023-07-14 02:00:45] 2023-07-14 01:00:23,036 | INFO | queue messages had 0 job(s) [purged]
[2023-07-14 02:00:45] 2023-07-14 01:00:23,036 | INFO | job 5903375784 has completed (purged errors)
[2023-07-14 02:00:45] 2023-07-14 01:00:23,036 | INFO | overall cleanup function is called
[2023-07-14 02:00:45] 2023-07-14 01:00:24,043 | INFO | --- collectZombieJob: --- 10, [13810]
[2023-07-14 02:00:45] 2023-07-14 01:00:24,044 | INFO | zombie collector trying to kill pid 13810
[2023-07-14 02:00:45] 2023-07-14 01:00:24,044 | INFO | harmless exception when collecting zombies: [Errno 10] No child processes
[2023-07-14 02:00:45] 2023-07-14 01:00:25,049 | INFO | collected zombie processes
[2023-07-14 02:00:45] 2023-07-14 01:00:25,049 | INFO | will now attempt to kill all subprocesses of pid=13810
[2023-07-14 02:00:45] 2023-07-14 01:00:25,095 | INFO | process IDs to be killed: [13810] (in reverse order)
[2023-07-14 02:00:45] 2023-07-14 01:00:25,127 | WARNING | found no corresponding commands to process id(s)
[2023-07-14 02:00:45] 2023-07-14 01:00:25,127 | INFO | Do not look for orphan processes in BOINC jobs
[2023-07-14 02:00:45] 2023-07-14 01:00:25,127 | INFO | ready for new job
[2023-07-14 02:00:45] 2023-07-14 01:00:25,127 | INFO | pilot has finished with previous job - re-establishing logging
[2023-07-14 02:00:45] 2023-07-14 01:00:25,128 | INFO | ****************************************
[2023-07-14 02:00:45] 2023-07-14 01:00:25,128 | INFO | *** PanDA Pilot version 3.6.1 (31) ***
[2023-07-14 02:00:45] 2023-07-14 01:00:25,128 | INFO | ****************************************
[2023-07-14 02:00:45] 2023-07-14 01:00:25,128 | INFO |
[2023-07-14 02:00:45] 2023-07-14 01:00:25,147 | INFO | architecture information:
[2023-07-14 02:00:45] 2023-07-14 01:00:25,147 | INFO | executing command: cat /etc/os-release
[2023-07-14 02:00:45] 2023-07-14 01:00:25,165 | INFO | cat /etc/os-release:
[2023-07-14 02:00:45] NAME="CentOS Linux"
[2023-07-14 02:00:45] VERSION="7 (Core)"
[2023-07-14 02:00:45] ID="centos"
[2023-07-14 02:00:45] ID_LIKE="rhel fedora"
[2023-07-14 02:00:45] VERSION_ID="7"
[2023-07-14 02:00:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2023-07-14 02:00:45] ANSI_COLOR="0;31"
[2023-07-14 02:00:45] CPE_NAME="cpe:/o:centos:centos:7"
[2023-07-14 02:00:45] HOME_URL="https://www.centos.org/"
[2023-07-14 02:00:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2023-07-14 02:00:45]
[2023-07-14 02:00:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2023-07-14 02:00:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2023-07-14 02:00:45] REDHAT_SUPPORT_PRODUCT="centos"
[2023-07-14 02:00:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2023-07-14 02:00:45]
[2023-07-14 02:00:45] 2023-07-14 01:00:25,165 | INFO | ****************************************
[2023-07-14 02:00:45] 2023-07-14 01:00:25,667 | INFO | executing command: df -mP /home/m/BOINC/slots/0
[2023-07-14 02:00:45] 2023-07-14 01:00:25,685 | INFO | sufficient remaining disk space (423659307008 B)
[2023-07-14 02:00:45] 2023-07-14 01:00:25,686 | WARNING | since timefloor is set to 0, pilot was only allowed to run one job
[2023-07-14 02:00:45] 2023-07-14 01:00:25,686 | WARNING | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2023-07-14 02:00:45] 2023-07-14 01:00:25,686 | WARNING | data:copytool_out:received graceful stop - abort after this iteration
[2023-07-14 02:00:45] 2023-07-14 01:00:25,686 | WARNING | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2023-07-14 02:00:45] 2023-07-14 01:00:25,687 | INFO | found 0 job(s) in 20 queues
[2023-07-14 02:00:45] 2023-07-14 01:00:25,687 | WARNING | pilot monitor received instruction that args.graceful_stop has been set
[2023-07-14 02:00:45] 2023-07-14 01:00:25,687 | WARNING | will wait for a maximum of 300 s for threads to finish
[2023-07-14 02:00:45] 2023-07-14 01:00:26,003 | WARNING | job:job_monitor:received graceful stop - abort after this iteration
[2023-07-14 02:00:45] 2023-07-14 01:00:26,003 | INFO | aborting loop
[2023-07-14 02:00:45] 2023-07-14 01:00:26,691 | INFO | [job] retrieve thread has finished
[2023-07-14 02:00:45] 2023-07-14 01:00:26,953 | INFO | [job] validate thread has finished
[2023-07-14 02:00:45] 2023-07-14 01:00:27,008 | INFO | [job] job monitor thread has finished
[2023-07-14 02:00:45] 2023-07-14 01:00:27,022 | INFO | [data] copytool_in thread has finished
[2023-07-14 02:00:45] 2023-07-14 01:00:27,127 | INFO | [data] control thread has finished
[2023-07-14 02:00:45] 2023-07-14 01:00:27,148 | INFO | [job] create_data_payload thread has finished
[2023-07-14 02:00:45] 2023-07-14 01:00:27,300 | INFO | [payload] validate_pre thread has finished
[2023-07-14 02:00:45] 2023-07-14 01:00:27,308 | INFO | [payload] control thread has finished
[2023-07-14 02:00:45] 2023-07-14 01:00:27,507 | INFO | [payload] failed_post thread has finished
[2023-07-14 02:00:45] 2023-07-14 01:00:27,692 | INFO | [data] copytool_out thread has finished
[2023-07-14 02:00:45] 2023-07-14 01:00:27,726 | INFO | [job] control thread has finished
[2023-07-14 02:00:45] 2023-07-14 01:00:27,962 | INFO | [payload] validate_post thread has finished
[2023-07-14 02:00:45] 2023-07-14 01:00:28,025 | WARNING | job:queue_monitor:received graceful stop - abort after this iteration
[2023-07-14 02:00:45] 2023-07-14 01:00:28,073 | INFO | [payload] execute_payloads thread has finished
[2023-07-14 02:00:45] 2023-07-14 01:00:28,261 | WARNING | data:queue_monitoring:received graceful stop - abort after this iteration
[2023-07-14 02:00:45] 2023-07-14 01:00:29,031 | INFO | [job] queue monitor thread has finished
[2023-07-14 02:00:45] 2023-07-14 01:00:32,266 | INFO | [data] queue_monitor thread has finished
[2023-07-14 02:00:45] 2023-07-14 01:00:37,474 | INFO | job.realtimelogging is not enabled
[2023-07-14 02:00:45] 2023-07-14 01:00:38,480 | INFO | [payload] run_realtimelog thread has finished
[2023-07-14 02:00:45] 2023-07-14 01:00:40,302 | INFO | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140155865491264)>', '<ExcThread(monitor, started 140155302172416)>']
[2023-07-14 02:00:45] 2023-07-14 01:00:40,763 | WARNING | job_aborted has been set - aborting pilot monitoring
[2023-07-14 02:00:45] 2023-07-14 01:00:40,763 | INFO | [monitor] control thread has ended
[2023-07-14 02:00:45] 2023-07-14 01:00:45,328 | INFO | end of generic workflow (traces error code: 0)
[2023-07-14 02:00:45] 2023-07-14 01:00:45,328 | INFO | traces error code: 0
[2023-07-14 02:00:45] 2023-07-14 01:00:45,328 | INFO | pilot has finished (exit code=0, shell exit code=0)
[2023-07-14 02:00:45] 2023-07-14 01:00:45,398 [wrapper] ==== pilot stdout END ====
[2023-07-14 02:00:45] 2023-07-14 01:00:45,403 [wrapper] ==== wrapper stdout RESUME ====
[2023-07-14 02:00:45] 2023-07-14 01:00:45,407 [wrapper] pilotpid: 6602
[2023-07-14 02:00:45] 2023-07-14 01:00:45,411 [wrapper] Pilot exit status: 0
[2023-07-14 02:00:45] 2023-07-14 01:00:45,421 [wrapper] pandaids: 5903375784
[2023-07-14 02:00:45] 2023-07-14 01:00:45,428 [wrapper] apfmon messages muted
[2023-07-14 02:00:45] 2023-07-14 01:00:45,432 [wrapper] Test setup, not cleaning
[2023-07-14 02:00:45] 2023-07-14 01:00:45,436 [wrapper] ==== wrapper stdout END ====
[2023-07-14 02:00:45] 2023-07-14 01:00:45,441 [wrapper] ==== wrapper stderr END ====
[2023-07-14 02:00:45] 2023-07-14 01:00:45,450 [wrapper] wrapperexiting ec=0, duration=1270
[2023-07-14 02:00:45] 2023-07-14 01:00:45,454 [wrapper] apfmon messages muted
[2023-07-14 02:00:45] *** Error codes and diagnostics ***
[2023-07-14 02:00:45] "exeErrorCode": 65,
[2023-07-14 02:00:45] "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"Segmentation fault: Event counter: 0; Run: unknown; Evt: unknown; Current algorithm: PyG4AtlasAlg; Current Function: unknown\"",
[2023-07-14 02:00:45] "pilotErrorCode": 1305,
[2023-07-14 02:00:45] "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute 2023-07-14 01:54:54,179 CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"Segmentation fault: Event counter: 0; Run: unknown; Evt: unknown; Current algorith",
[2023-07-14 02:00:45] *** Listing of results directory ***
[2023-07-14 02:00:45] total 41912
[2023-07-14 02:00:45] -rwx------ 1 m m 27012 Jul 14 01:35 runpilot2-wrapper.sh
[2023-07-14 02:00:45] -rw-r--r-- 1 m m 4388 Jul 14 01:35 queuedata.json
[2023-07-14 02:00:45] -rw-r--r-- 1 m m 410964 Jul 14 01:35 pilot3.tar.gz
[2023-07-14 02:00:45] -rw-rw-r-- 1 m m 107 Jul 14 01:39 wrapper_26015_x86_64-pc-linux-gnu
[2023-07-14 02:00:45] -rwxr-xr-x 1 m m 7986 Jul 14 01:39 run_atlas
[2023-07-14 02:00:45] -rw-rw-r-- 1 m m 112 Jul 14 01:39 job.xml
[2023-07-14 02:00:45] -rw-r--r-- 2 m m 17604 Jul 14 01:39 start_atlas.sh
[2023-07-14 02:00:45] drwxrwx--x 2 m m 4096 Jul 14 01:39 shared
[2023-07-14 02:00:45] -rw-r--r-- 2 m m 422277 Jul 14 01:39 input.tar.gz
[2023-07-14 02:00:45] -rw-rw-r-- 1 m m 5726 Jul 14 01:39 init_data.xml
[2023-07-14 02:00:45] -rw-r--r-- 2 m m 38971704 Jul 14 01:39 EVNT.04972714._000035.pool.root.1
[2023-07-14 02:00:45] -rw-rw-r-- 1 m m 0 Jul 14 01:39 boinc_lockfile
[2023-07-14 02:00:45] -rw-rw-r-- 1 m m 2757 Jul 14 01:39 pandaJob.out
[2023-07-14 02:00:45] -rw------- 1 m m 424 Jul 14 01:39 setup.sh.local
[2023-07-14 02:00:45] -rw------- 1 m m 1016342 Jul 14 01:40 agis_schedconf.cvmfs.json
[2023-07-14 02:00:45] -rw------- 1 m m 1374816 Jul 14 01:41 cric_ddmendpoints.json
[2023-07-14 02:00:45] drwx------ 4 m m 4096 Jul 14 01:42 pilot3
[2023-07-14 02:00:45] -rw------- 1 m m 1015 Jul 14 01:54 memory_monitor_summary.json
[2023-07-14 02:00:45] -rw------- 1 m m 87164 Jul 14 01:55 da19a73e-b019-45aa-a5aa-8fe491f35a7b_77665.1.job.log.tgz
[2023-07-14 02:00:45] -rw-rw-r-- 1 m m 531 Jul 14 01:55 boinc_task_state.xml
[2023-07-14 02:00:45] -rw------- 1 m m 9359 Jul 14 02:00 heartbeat.json
[2023-07-14 02:00:45] -rw------- 1 m m 4104 Jul 14 02:00 pilotlog.txt
[2023-07-14 02:00:45] -rw-rw-r-- 1 m m 8192 Jul 14 02:00 boinc_mmap_file
[2023-07-14 02:00:45] -rw-rw-r-- 1 m m 24 Jul 14 02:00 wrapper_checkpoint.txt
[2023-07-14 02:00:45] -rw------- 1 m m 159145 Jul 14 02:00 da19a73e-b019-45aa-a5aa-8fe491f35a7b_77665.1.job.log
[2023-07-14 02:00:45] -rw------- 1 m m 227 Jul 14 02:00 output.list
[2023-07-14 02:00:45] -rw-rw-r-- 1 m m 686 Jul 14 02:00 runtime_log
[2023-07-14 02:00:45] -rw------- 1 m m 266240 Jul 14 02:00 result.tar.gz
[2023-07-14 02:00:45] -rw-rw-r-- 1 m m 11324 Jul 14 02:00 runtime_log.err
[2023-07-14 02:00:45] -rw------- 1 m m 624 Jul 14 02:00 JCaKDmixLe3n7Olcko1bjSoqABFKDmABFKDm7AsVDm7FNKDmAZXsen.diag
[2023-07-14 02:00:45] -rw-rw-r-- 1 m m 22344 Jul 14 02:00 stderr.txt
[2023-07-14 02:00:45] No HITS result produced
[2023-07-14 02:00:45] *** Contents of shared directory: ***
[2023-07-14 02:00:45] total 38756
[2023-07-14 02:00:45] -rw-r--r-- 2 m m 17604 Jul 14 01:39 start_atlas.sh
[2023-07-14 02:00:45] -rw-r--r-- 2 m m 422277 Jul 14 01:39 input.tar.gz
[2023-07-14 02:00:45] -rw-r--r-- 2 m m 38971704 Jul 14 01:39 ATLAS.root_0
[2023-07-14 02:00:45] -rw------- 1 m m 266240 Jul 14 02:00 result.tar.gz
02:00:47 (2833): run_atlas exited; CPU time 83.555453
02:00:47 (2833): called boinc_finish(0)
</stderr_txt>
]]>
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