| Name | eLxMDm9Jpf3n7Olcko1bjSoqABFKDmABFKDm7AsVDmqVNKDmR94CDo_1 |
| Workunit | 2318969 |
| Created | 18 Jul 2023, 3:08:04 UTC |
| Sent | 18 Jul 2023, 3:26:29 UTC |
| Report deadline | 25 Jul 2023, 3:26:29 UTC |
| Received | 18 Jul 2023, 3:56:55 UTC |
| Server state | Over |
| Outcome | Success |
| Client state | Done |
| Exit status | 0 (0x00000000) |
| Computer ID | 1498 |
| Run time | 27 min 42 sec |
| CPU time | 14 min 12 sec |
| Validate state | Valid |
| Credit | 18.61 |
| Device peak FLOPS | 13.02 GFLOPS |
| Application version | ATLAS Simulation v3.01 (native_mt) x86_64-pc-linux-gnu |
| Peak working set size | 1.51 GB |
| Peak swap size | 2.12 GB |
| Peak disk usage | 81.43 MB |
Stderr output
<core_client_version>7.4.25</core_client_version>
<![CDATA[
<stderr_txt>
04:27:40 (22924): wrapper (7.7.26015): starting
04:27:40 (22924): wrapper: running run_atlas (--nthreads 4)
[2023-07-18 04:27:40] Arguments: --nthreads 4
[2023-07-18 04:27:40] Threads: 4
[2023-07-18 04:27:40] Checking for CVMFS
[2023-07-18 04:27:43] Probing /cvmfs/atlas.cern.ch... OK
[2023-07-18 04:27:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2023-07-18 04:27:44] Running cvmfs_config stat atlas.cern.ch
[2023-07-18 04:27:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2023-07-18 04:27:44] 2.9.0.0 23068 0 24524 121404 3 1 3800719 4194304 0 130560 0 0 0.000 829 463 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.100.152:3128 1
[2023-07-18 04:27:44] CVMFS is ok
[2023-07-18 04:27:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2023-07-18 04:27:44] Checking for apptainer binary...
[2023-07-18 04:27:44] Using apptainer found in PATH at /usr/bin/apptainer
[2023-07-18 04:27:44] Running /usr/bin/apptainer --version
[2023-07-18 04:27:44] apptainer version 1.0.3
[2023-07-18 04:27:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2023-07-18 04:27:44] TeeC16
[2023-07-18 04:27:44] apptainer works
[2023-07-18 04:27:44] Set ATHENA_PROC_NUMBER=4
[2023-07-18 04:27:44] Set ATHENA_CORE_NUMBER=4
[2023-07-18 04:27:44] Starting ATLAS job with PandaID=5906770916
[2023-07-18 04:27:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/m/BOINC/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2023-07-18 04:55:19] *** The last 200 lines of the pilot log: ***
[2023-07-18 04:55:19] 2023-07-18 03:54:30,393 | INFO | work directory size check will use 61362667520 B as a max limit (10% grace limit added)
[2023-07-18 04:55:19] 2023-07-18 03:54:30,393 | INFO | size of work directory /home/m/BOINC/slots/0/PanDA_Pilot-5906770916: 1125459 B (within 61362667520 B limit)
[2023-07-18 04:55:19] 2023-07-18 03:54:30,394 | INFO | pfn file=/home/m/BOINC/slots/0/PanDA_Pilot-5906770916/output.1.05080bfa-edeb-43f5-a7bc-a0548eaefd51_24096.pool.root does not exist (skip from workdir size calculat
[2023-07-18 04:55:19] 2023-07-18 03:54:30,394 | INFO | total size of present files: 0 B (workdir size: 1125459 B)
[2023-07-18 04:55:19] 2023-07-18 03:54:30,394 | INFO | output file size check: skipping output file /home/m/BOINC/slots/0/PanDA_Pilot-5906770916/output.1.05080bfa-edeb-43f5-a7bc-a0548eaefd51_24096.pool.root since it do
[2023-07-18 04:55:19] 2023-07-18 03:54:30,434 | INFO | number of running child processes to parent process 1541: 1
[2023-07-18 04:55:19] 2023-07-18 03:54:30,434 | INFO | maximum number of monitored processes: 5
[2023-07-18 04:55:19] 2023-07-18 03:54:31,707 | INFO | [attempt=2/3] loading data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json
[2023-07-18 04:55:19] 2023-07-18 03:54:32,002 | WARNING | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed:
[2023-07-18 04:55:19] 2023-07-18 03:54:32,002 | INFO | will try again after 15s..
[2023-07-18 04:55:19] 2023-07-18 03:54:32,937 | INFO | monitor loop #211: job 0:5906770916 is in state 'stageout'
[2023-07-18 04:55:19] 2023-07-18 03:54:32,975 | INFO | number of running child processes to parent process 1541: 1
[2023-07-18 04:55:19] 2023-07-18 03:54:32,975 | INFO | maximum number of monitored processes: 5
[2023-07-18 04:55:19] 2023-07-18 03:54:35,478 | INFO | monitor loop #212: job 0:5906770916 is in state 'stageout'
[2023-07-18 04:55:19] 2023-07-18 03:54:35,515 | INFO | number of running child processes to parent process 1541: 1
[2023-07-18 04:55:19] 2023-07-18 03:54:35,515 | INFO | maximum number of monitored processes: 5
[2023-07-18 04:55:19] 2023-07-18 03:54:38,016 | INFO | monitor loop #213: job 0:5906770916 is in state 'stageout'
[2023-07-18 04:55:19] 2023-07-18 03:54:38,060 | INFO | number of running child processes to parent process 1541: 1
[2023-07-18 04:55:19] 2023-07-18 03:54:38,060 | INFO | maximum number of monitored processes: 5
[2023-07-18 04:55:19] 2023-07-18 03:54:40,563 | INFO | monitor loop #214: job 0:5906770916 is in state 'stageout'
[2023-07-18 04:55:19] 2023-07-18 03:54:40,607 | INFO | number of running child processes to parent process 1541: 1
[2023-07-18 04:55:19] 2023-07-18 03:54:40,607 | INFO | maximum number of monitored processes: 5
[2023-07-18 04:55:19] 2023-07-18 03:54:43,110 | INFO | monitor loop #215: job 0:5906770916 is in state 'stageout'
[2023-07-18 04:55:19] 2023-07-18 03:54:43,153 | INFO | number of running child processes to parent process 1541: 1
[2023-07-18 04:55:19] 2023-07-18 03:54:43,153 | INFO | maximum number of monitored processes: 5
[2023-07-18 04:55:19] 2023-07-18 03:54:45,656 | INFO | monitor loop #216: job 0:5906770916 is in state 'stageout'
[2023-07-18 04:55:19] 2023-07-18 03:54:45,699 | INFO | number of running child processes to parent process 1541: 1
[2023-07-18 04:55:19] 2023-07-18 03:54:45,699 | INFO | maximum number of monitored processes: 5
[2023-07-18 04:55:19] 2023-07-18 03:54:47,049 | INFO | [attempt=3/3] loading data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json
[2023-07-18 04:55:19] 2023-07-18 03:54:47,279 | WARNING | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed:
[2023-07-18 04:55:19] 2023-07-18 03:54:47,280 | WARNING | cache file=/home/m/BOINC/slots/0/agis_ddmendpoints.agis.ALL.json is not available: [Errno 2] No such file or directory: '/home/m/BOINC/slots/0/agis_ddmendpoints.ag
[2023-07-18 04:55:19] 2023-07-18 03:54:47,324 | INFO | transferring file 05080bfa-edeb-43f5-a7bc-a0548eaefd51_24096.1.job.log.tgz from /home/m/BOINC/slots/0/PanDA_Pilot-5906770916/05080bfa-edeb-43f5-a7bc-a0548eaefd51_2
[2023-07-18 04:55:19] 2023-07-18 03:54:47,325 | INFO | executing command: /usr/bin/env mv /home/m/BOINC/slots/0/PanDA_Pilot-5906770916/05080bfa-edeb-43f5-a7bc-a0548eaefd51_24096.1.job.log.tgz /home/m/BOINC/slots/0/0508
[2023-07-18 04:55:19] 2023-07-18 03:54:47,345 | INFO | Adding to output.list: 05080bfa-edeb-43f5-a7bc-a0548eaefd51_24096.1.job.log.tgz davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/d6/6c/05080bfa-edeb-
[2023-07-18 04:55:19] 2023-07-18 03:54:47,345 | INFO | summary of transferred files:
[2023-07-18 04:55:19] 2023-07-18 03:54:47,345 | INFO | -- lfn=05080bfa-edeb-43f5-a7bc-a0548eaefd51_24096.1.job.log.tgz, status_code=0, status=transferred
[2023-07-18 04:55:19] 2023-07-18 03:54:47,346 | INFO | stage-out finished correctly
[2023-07-18 04:55:19] 2023-07-18 03:54:47,410 | INFO | finished stage-out for finished payload, adding job to finished_jobs queue
[2023-07-18 04:55:19] 2023-07-18 03:54:47,885 | INFO | job 5906770916 has state=finished
[2023-07-18 04:55:19] 2023-07-18 03:54:47,885 | INFO | preparing for final server update for job 5906770916 in state='finished'
[2023-07-18 04:55:19] 2023-07-18 03:54:47,886 | INFO | this job has now completed (state=finished)
[2023-07-18 04:55:19] 2023-07-18 03:54:47,886 | INFO | pilot will not update the server (heartbeat message will be written to file)
[2023-07-18 04:55:19] 2023-07-18 03:54:47,886 | INFO | job 5906770916 has finished - writing final server update
[2023-07-18 04:55:19] 2023-07-18 03:54:47,887 | INFO | fitting pss+swap vs Time
[2023-07-18 04:55:19] 2023-07-18 03:54:47,888 | INFO | current memory leak: 368.58 B/s (using 10 data points, chi2=0.03)
[2023-07-18 04:55:19] 2023-07-18 03:54:47,889 | INFO | total number of processed events: 2 (read)
[2023-07-18 04:55:19] 2023-07-18 03:54:47,908 | INFO | executing command: lscpu
[2023-07-18 04:55:19] 2023-07-18 03:54:47,930 | INFO | found 2 cores (2 cores per socket, 1 sockets)
[2023-07-18 04:55:19] 2023-07-18 03:54:47,931 | INFO | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2023-07-18 04:55:19] 2023-07-18 03:54:47,959 | INFO | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2023-07-18 04:55:19] 2023-07-18 03:54:48,202 | INFO | monitor loop #217: job 0:5906770916 is in state 'finished'
[2023-07-18 04:55:19] 2023-07-18 03:54:48,203 | INFO | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-07-18 04:55:19] 2023-07-18 03:54:50,706 | INFO | monitor loop #218: job 0:5906770916 is in state 'finished'
[2023-07-18 04:55:19] 2023-07-18 03:54:50,706 | INFO | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-07-18 04:55:19] 2023-07-18 03:54:53,207 | INFO | monitor loop #219: job 0:5906770916 is in state 'finished'
[2023-07-18 04:55:19] 2023-07-18 03:54:53,208 | INFO | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-07-18 04:55:19] 2023-07-18 03:54:55,711 | INFO | monitor loop #220: job 0:5906770916 is in state 'finished'
[2023-07-18 04:55:19] 2023-07-18 03:54:55,711 | INFO | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-07-18 04:55:19] 2023-07-18 03:54:58,214 | INFO | monitor loop #221: job 0:5906770916 is in state 'finished'
[2023-07-18 04:55:19] 2023-07-18 03:54:58,215 | INFO | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-07-18 04:55:19] 2023-07-18 03:54:59,567 | INFO | CPU arch script returned: x86-64-v2
[2023-07-18 04:55:19] 2023-07-18 03:54:59,567 | INFO | using path: /home/m/BOINC/slots/0/PanDA_Pilot-5906770916/memory_monitor_summary.json (trf name=prmon)
[2023-07-18 04:55:19] 2023-07-18 03:54:59,568 | INFO | extracted standard info from prmon json
[2023-07-18 04:55:19] 2023-07-18 03:54:59,569 | INFO | extracted standard memory fields from prmon json
[2023-07-18 04:55:19] 2023-07-18 03:54:59,569 | INFO | ..............................
[2023-07-18 04:55:19] 2023-07-18 03:54:59,569 | INFO | . Timing measurements:
[2023-07-18 04:55:19] 2023-07-18 03:54:59,569 | INFO | . get job = 51 s
[2023-07-18 04:55:19] 2023-07-18 03:54:59,569 | INFO | . initial setup = 72 s
[2023-07-18 04:55:19] 2023-07-18 03:54:59,569 | INFO | . payload setup = 7 s
[2023-07-18 04:55:19] 2023-07-18 03:54:59,569 | INFO | . stage-in = 45 s
[2023-07-18 04:55:19] 2023-07-18 03:54:59,569 | INFO | . payload execution = 1028 s
[2023-07-18 04:55:19] 2023-07-18 03:54:59,569 | INFO | . stage-out = 379 s
[2023-07-18 04:55:19] 2023-07-18 03:54:59,569 | INFO | ..............................
[2023-07-18 04:55:19] 2023-07-18 03:54:59,632 | INFO |
[2023-07-18 04:55:19] 2023-07-18 03:54:59,633 | INFO | job summary report
[2023-07-18 04:55:19] 2023-07-18 03:54:59,633 | INFO | --------------------------------------------------
[2023-07-18 04:55:19] 2023-07-18 03:54:59,633 | INFO | PanDA job id: 5906770916
[2023-07-18 04:55:19] 2023-07-18 03:54:59,633 | INFO | task id: NULL
[2023-07-18 04:55:19] 2023-07-18 03:54:59,633 | INFO | errors: (none)
[2023-07-18 04:55:19] 2023-07-18 03:54:59,633 | INFO | status: LOG_TRANSFER = DONE
[2023-07-18 04:55:19] 2023-07-18 03:54:59,633 | INFO | pilot state: finished
[2023-07-18 04:55:19] 2023-07-18 03:54:59,633 | INFO | transexitcode: 0
[2023-07-18 04:55:19] 2023-07-18 03:54:59,633 | INFO | exeerrorcode: 0
[2023-07-18 04:55:19] 2023-07-18 03:54:59,633 | INFO | exeerrordiag:
[2023-07-18 04:55:19] 2023-07-18 03:54:59,633 | INFO | exitcode: 0
[2023-07-18 04:55:19] 2023-07-18 03:54:59,634 | INFO | exitmsg: OK
[2023-07-18 04:55:19] 2023-07-18 03:54:59,634 | INFO | cpuconsumptiontime: 868 s
[2023-07-18 04:55:19] 2023-07-18 03:54:59,634 | INFO | nevents: 2
[2023-07-18 04:55:19] 2023-07-18 03:54:59,634 | INFO | neventsw: 0
[2023-07-18 04:55:19] 2023-07-18 03:54:59,634 | INFO | pid: 1541
[2023-07-18 04:55:19] 2023-07-18 03:54:59,634 | INFO | pgrp: 1541
[2023-07-18 04:55:19] 2023-07-18 03:54:59,634 | INFO | corecount: 4
[2023-07-18 04:55:19] 2023-07-18 03:54:59,634 | INFO | event service: False
[2023-07-18 04:55:19] 2023-07-18 03:54:59,634 | INFO | sizes: {0: 2456325, 1: 2456325, 12: 2456499, 22: 2456527, 33: 2456555, 44: 2456583, 50: 2456799, 54: 2456827, 1039: 2476748, 1040: 2476747, 1419: 2486383, 1431: 24
[2023-07-18 04:55:19] 2023-07-18 03:54:59,634 | INFO | --------------------------------------------------
[2023-07-18 04:55:19] 2023-07-18 03:54:59,634 | INFO |
[2023-07-18 04:55:19] 2023-07-18 03:54:59,635 | INFO | executing command: ls -lF /home/m/BOINC/slots/0
[2023-07-18 04:55:19] 2023-07-18 03:54:59,654 | INFO | queue jobs had 0 job(s) [purged]
[2023-07-18 04:55:19] 2023-07-18 03:54:59,655 | INFO | queue payloads had 0 job(s) [purged]
[2023-07-18 04:55:19] 2023-07-18 03:54:59,655 | INFO | queue data_in had 0 job(s) [purged]
[2023-07-18 04:55:19] 2023-07-18 03:54:59,655 | INFO | queue data_out had 0 job(s) [purged]
[2023-07-18 04:55:19] 2023-07-18 03:54:59,655 | INFO | queue current_data_in had 0 job(s) [purged]
[2023-07-18 04:55:19] 2023-07-18 03:54:59,655 | INFO | queue validated_jobs had 0 job(s) [purged]
[2023-07-18 04:55:19] 2023-07-18 03:54:59,655 | INFO | queue validated_payloads had 0 job(s) [purged]
[2023-07-18 04:55:19] 2023-07-18 03:54:59,656 | INFO | queue monitored_payloads had 0 job(s) [purged]
[2023-07-18 04:55:19] 2023-07-18 03:54:59,656 | INFO | queue finished_jobs had 0 job(s) [purged]
[2023-07-18 04:55:19] 2023-07-18 03:54:59,656 | INFO | queue finished_payloads had 0 job(s) [purged]
[2023-07-18 04:55:19] 2023-07-18 03:54:59,656 | INFO | queue finished_data_in had 1 job(s) [purged]
[2023-07-18 04:55:19] 2023-07-18 03:54:59,656 | INFO | queue finished_data_out had 0 job(s) [purged]
[2023-07-18 04:55:19] 2023-07-18 03:54:59,656 | INFO | queue failed_jobs had 0 job(s) [purged]
[2023-07-18 04:55:19] 2023-07-18 03:54:59,656 | INFO | queue failed_payloads had 0 job(s) [purged]
[2023-07-18 04:55:19] 2023-07-18 03:54:59,656 | INFO | queue failed_data_in had 0 job(s) [purged]
[2023-07-18 04:55:19] 2023-07-18 03:54:59,657 | INFO | queue failed_data_out had 0 job(s) [purged]
[2023-07-18 04:55:19] 2023-07-18 03:54:59,657 | INFO | queue completed_jobs had 0 job(s) [purged]
[2023-07-18 04:55:19] 2023-07-18 03:54:59,657 | INFO | queue completed_jobids has 1 job(s)
[2023-07-18 04:55:19] 2023-07-18 03:54:59,657 | INFO | queue realtimelog_payloads had 0 job(s) [purged]
[2023-07-18 04:55:19] 2023-07-18 03:54:59,657 | INFO | queue messages had 0 job(s) [purged]
[2023-07-18 04:55:19] 2023-07-18 03:54:59,657 | INFO | job 5906770916 has completed (purged errors)
[2023-07-18 04:55:19] 2023-07-18 03:54:59,657 | INFO | overall cleanup function is called
[2023-07-18 04:55:19] 2023-07-18 03:55:00,664 | INFO | --- collectZombieJob: --- 10, [1541]
[2023-07-18 04:55:19] 2023-07-18 03:55:00,665 | INFO | zombie collector trying to kill pid 1541
[2023-07-18 04:55:19] 2023-07-18 03:55:00,665 | INFO | harmless exception when collecting zombies: [Errno 10] No child processes
[2023-07-18 04:55:19] 2023-07-18 03:55:01,670 | INFO | collected zombie processes
[2023-07-18 04:55:19] 2023-07-18 03:55:01,670 | INFO | will now attempt to kill all subprocesses of pid=1541
[2023-07-18 04:55:19] 2023-07-18 03:55:01,714 | INFO | process IDs to be killed: [1541] (in reverse order)
[2023-07-18 04:55:19] 2023-07-18 03:55:01,753 | WARNING | found no corresponding commands to process id(s)
[2023-07-18 04:55:19] 2023-07-18 03:55:01,753 | INFO | Do not look for orphan processes in BOINC jobs
[2023-07-18 04:55:19] 2023-07-18 03:55:01,753 | INFO | ready for new job
[2023-07-18 04:55:19] 2023-07-18 03:55:01,753 | INFO | pilot has finished with previous job - re-establishing logging
[2023-07-18 04:55:19] 2023-07-18 03:55:01,754 | INFO | *************************************
[2023-07-18 04:55:19] 2023-07-18 03:55:01,754 | INFO | *** PanDA Pilot version 3.6.4.7 ***
[2023-07-18 04:55:19] 2023-07-18 03:55:01,754 | INFO | *************************************
[2023-07-18 04:55:19] 2023-07-18 03:55:01,754 | INFO |
[2023-07-18 04:55:19] 2023-07-18 03:55:01,771 | INFO | architecture information:
[2023-07-18 04:55:19] 2023-07-18 03:55:01,772 | INFO | executing command: cat /etc/os-release
[2023-07-18 04:55:19] 2023-07-18 03:55:01,788 | INFO | cat /etc/os-release:
[2023-07-18 04:55:19] NAME="CentOS Linux"
[2023-07-18 04:55:19] VERSION="7 (Core)"
[2023-07-18 04:55:19] ID="centos"
[2023-07-18 04:55:19] ID_LIKE="rhel fedora"
[2023-07-18 04:55:19] VERSION_ID="7"
[2023-07-18 04:55:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2023-07-18 04:55:19] ANSI_COLOR="0;31"
[2023-07-18 04:55:19] CPE_NAME="cpe:/o:centos:centos:7"
[2023-07-18 04:55:19] HOME_URL="https://www.centos.org/"
[2023-07-18 04:55:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2023-07-18 04:55:19]
[2023-07-18 04:55:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2023-07-18 04:55:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2023-07-18 04:55:19] REDHAT_SUPPORT_PRODUCT="centos"
[2023-07-18 04:55:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2023-07-18 04:55:19]
[2023-07-18 04:55:19] 2023-07-18 03:55:01,789 | INFO | *************************************
[2023-07-18 04:55:19] 2023-07-18 03:55:02,292 | INFO | executing command: df -mP /home/m/BOINC/slots/0
[2023-07-18 04:55:19] 2023-07-18 03:55:02,310 | INFO | sufficient remaining disk space (422908526592 B)
[2023-07-18 04:55:19] 2023-07-18 03:55:02,310 | WARNING | since timefloor is set to 0, pilot was only allowed to run one job
[2023-07-18 04:55:19] 2023-07-18 03:55:02,310 | WARNING | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2023-07-18 04:55:19] 2023-07-18 03:55:02,311 | WARNING | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2023-07-18 04:55:19] 2023-07-18 03:55:02,311 | WARNING | job:job_monitor:received graceful stop - abort after this iteration
[2023-07-18 04:55:19] 2023-07-18 03:55:02,311 | INFO | found 0 job(s) in 20 queues
[2023-07-18 04:55:19] 2023-07-18 03:55:02,311 | INFO | aborting loop
[2023-07-18 04:55:19] 2023-07-18 03:55:02,312 | WARNING | pilot monitor received instruction that args.graceful_stop has been set
[2023-07-18 04:55:19] 2023-07-18 03:55:02,312 | WARNING | will wait for a maximum of 300 s for threads to finish
[2023-07-18 04:55:19] 2023-07-18 03:55:02,486 | WARNING | data:queue_monitoring:received graceful stop - abort after this iteration
[2023-07-18 04:55:19] 2023-07-18 03:55:02,928 | WARNING | data:copytool_out:received graceful stop - abort after this iteration
[2023-07-18 04:55:19] 2023-07-18 03:55:03,316 | INFO | [job] retrieve thread has finished
[2023-07-18 04:55:19] 2023-07-18 03:55:03,317 | INFO | [job] job monitor thread has finished
[2023-07-18 04:55:19] 2023-07-18 03:55:03,339 | INFO | [job] validate thread has finished
[2023-07-18 04:55:19] 2023-07-18 03:55:03,526 | INFO | [job] create_data_payload thread has finished
[2023-07-18 04:55:19] 2023-07-18 03:55:03,554 | INFO | [payload] execute_payloads thread has finished
[2023-07-18 04:55:19] 2023-07-18 03:55:03,591 | INFO | [data] copytool_in thread has finished
[2023-07-18 04:55:19] 2023-07-18 03:55:03,643 | INFO | [payload] validate_pre thread has finished
[2023-07-18 04:55:19] 2023-07-18 03:55:03,927 | INFO | [job] control thread has finished
[2023-07-18 04:55:19] 2023-07-18 03:55:04,108 | INFO | [payload] control thread has finished
[2023-07-18 04:55:19] 2023-07-18 03:55:04,123 | INFO | [data] control thread has finished
[2023-07-18 04:55:19] 2023-07-18 03:55:04,234 | INFO | [payload] failed_post thread has finished
[2023-07-18 04:55:19] 2023-07-18 03:55:04,643 | WARNING | job:queue_monitor:received graceful stop - abort after this iteration
[2023-07-18 04:55:19] 2023-07-18 03:55:04,818 | INFO | [payload] validate_post thread has finished
[2023-07-18 04:55:19] 2023-07-18 03:55:04,933 | INFO | [data] copytool_out thread has finished
[2023-07-18 04:55:19] 2023-07-18 03:55:05,648 | INFO | [job] queue monitor thread has finished
[2023-07-18 04:55:19] 2023-07-18 03:55:06,491 | INFO | [data] queue_monitor thread has finished
[2023-07-18 04:55:19] 2023-07-18 03:55:12,766 | INFO | job.realtimelogging is not enabled
[2023-07-18 04:55:19] 2023-07-18 03:55:13,771 | INFO | [payload] run_realtimelog thread has finished
[2023-07-18 04:55:19] 2023-07-18 03:55:14,440 | INFO | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139668655540032)>', '<ExcThread(monitor, started 139668091819776)>']
[2023-07-18 04:55:19] 2023-07-18 03:55:15,376 | WARNING | job_aborted has been set - aborting pilot monitoring
[2023-07-18 04:55:19] 2023-07-18 03:55:15,376 | INFO | [monitor] control thread has ended
[2023-07-18 04:55:19] 2023-07-18 03:55:19,466 | INFO | end of generic workflow (traces error code: 0)
[2023-07-18 04:55:19] 2023-07-18 03:55:19,467 | INFO | traces error code: 0
[2023-07-18 04:55:19] 2023-07-18 03:55:19,467 | INFO | pilot has finished (exit code=0, shell exit code=0)
[2023-07-18 04:55:19] 2023-07-18 03:55:19,515 [wrapper] ==== pilot stdout END ====
[2023-07-18 04:55:19] 2023-07-18 03:55:19,519 [wrapper] ==== wrapper stdout RESUME ====
[2023-07-18 04:55:19] 2023-07-18 03:55:19,524 [wrapper] pilotpid: 26545
[2023-07-18 04:55:19] 2023-07-18 03:55:19,528 [wrapper] Pilot exit status: 0
[2023-07-18 04:55:19] 2023-07-18 03:55:19,542 [wrapper] pandaids: 5906770916
[2023-07-18 04:55:19] 2023-07-18 03:55:19,551 [wrapper] apfmon messages muted
[2023-07-18 04:55:19] 2023-07-18 03:55:19,556 [wrapper] Test setup, not cleaning
[2023-07-18 04:55:19] 2023-07-18 03:55:19,561 [wrapper] ==== wrapper stdout END ====
[2023-07-18 04:55:19] 2023-07-18 03:55:19,567 [wrapper] ==== wrapper stderr END ====
[2023-07-18 04:55:19] 2023-07-18 03:55:19,577 [wrapper] wrapperexiting ec=0, duration=1654
[2023-07-18 04:55:19] 2023-07-18 03:55:19,582 [wrapper] apfmon messages muted
[2023-07-18 04:55:19] *** Error codes and diagnostics ***
[2023-07-18 04:55:19] "exeErrorCode": 0,
[2023-07-18 04:55:19] "exeErrorDiag": "",
[2023-07-18 04:55:19] "pilotErrorCode": 0,
[2023-07-18 04:55:19] "pilotErrorDiag": "",
[2023-07-18 04:55:19] *** Listing of results directory ***
[2023-07-18 04:55:19] total 44888
[2023-07-18 04:55:19] -rw-r--r-- 1 m m 418016 Jul 18 02:37 pilot3.tar.gz
[2023-07-18 04:55:19] -rwx------ 1 m m 27012 Jul 18 03:08 runpilot2-wrapper.sh
[2023-07-18 04:55:19] -rw-r--r-- 1 m m 4388 Jul 18 03:08 queuedata.json
[2023-07-18 04:55:19] -rw-rw-r-- 1 m m 107 Jul 18 04:27 wrapper_26015_x86_64-pc-linux-gnu
[2023-07-18 04:55:19] -rwxr-xr-x 1 m m 7986 Jul 18 04:27 run_atlas
[2023-07-18 04:55:19] -rw-rw-r-- 1 m m 112 Jul 18 04:27 job.xml
[2023-07-18 04:55:19] drwxrwx--x 2 m m 4096 Jul 18 04:27 shared
[2023-07-18 04:55:19] -rw-r--r-- 2 m m 428827 Jul 18 04:27 input.tar.gz
[2023-07-18 04:55:19] -rw-rw-r-- 1 m m 5726 Jul 18 04:27 init_data.xml
[2023-07-18 04:55:19] -rw-r--r-- 2 m m 37658468 Jul 18 04:27 EVNT.04972714._000029.pool.root.1
[2023-07-18 04:55:19] -rw-r--r-- 2 m m 17604 Jul 18 04:27 start_atlas.sh
[2023-07-18 04:55:19] -rw-rw-r-- 1 m m 0 Jul 18 04:27 boinc_lockfile
[2023-07-18 04:55:19] -rw-rw-r-- 1 m m 2754 Jul 18 04:27 pandaJob.out
[2023-07-18 04:55:19] -rw------- 1 m m 424 Jul 18 04:27 setup.sh.local
[2023-07-18 04:55:19] -rw------- 1 m m 1370854 Jul 18 04:29 cric_ddmendpoints.json
[2023-07-18 04:55:19] -rw------- 1 m m 1015154 Jul 18 04:29 agis_schedconf.cvmfs.json
[2023-07-18 04:55:19] drwx------ 4 m m 4096 Jul 18 04:30 pilot3
[2023-07-18 04:55:19] -rw------- 1 m m 2054600 Jul 18 04:48 output.1.05080bfa-edeb-43f5-a7bc-a0548eaefd51_24096.pool.root
[2023-07-18 04:55:19] -rw-rw-r-- 1 m m 533 Jul 18 04:48 boinc_task_state.xml
[2023-07-18 04:55:19] -rw------- 1 m m 1017 Jul 18 04:48 memory_monitor_summary.json
[2023-07-18 04:55:19] -rw------- 1 m m 162642 Jul 18 04:52 05080bfa-edeb-43f5-a7bc-a0548eaefd51_24096.1.job.log.tgz
[2023-07-18 04:55:19] -rw-rw-r-- 1 m m 8192 Jul 18 04:54 boinc_mmap_file
[2023-07-18 04:55:19] -rw-rw-r-- 1 m m 25 Jul 18 04:54 wrapper_checkpoint.txt
[2023-07-18 04:55:19] -rw------- 1 m m 6673 Jul 18 04:54 heartbeat.json
[2023-07-18 04:55:19] -rw------- 1 m m 4092 Jul 18 04:55 pilotlog.txt
[2023-07-18 04:55:19] -rw------- 1 m m 212874 Jul 18 04:55 05080bfa-edeb-43f5-a7bc-a0548eaefd51_24096.1.job.log
[2023-07-18 04:55:19] -rw------- 1 m m 464 Jul 18 04:55 output.list
[2023-07-18 04:55:19] -rw-rw-r-- 1 m m 748 Jul 18 04:55 runtime_log
[2023-07-18 04:55:19] -rw------- 1 m m 2447360 Jul 18 04:55 result.tar.gz
[2023-07-18 04:55:19] -rw-rw-r-- 1 m m 11905 Jul 18 04:55 runtime_log.err
[2023-07-18 04:55:19] -rw------- 1 m m 627 Jul 18 04:55 eLxMDm9Jpf3n7Olcko1bjSoqABFKDmABFKDm7AsVDmqVNKDmR94CDo.diag
[2023-07-18 04:55:19] -rw-rw-r-- 1 m m 22925 Jul 18 04:55 stderr.txt
[2023-07-18 04:55:19] HITS file was successfully produced:
[2023-07-18 04:55:19] -rw------- 1 m m 2054600 Jul 18 04:48 shared/HITS.pool.root.1
[2023-07-18 04:55:19] *** Contents of shared directory: ***
[2023-07-18 04:55:19] total 41616
[2023-07-18 04:55:19] -rw-r--r-- 2 m m 428827 Jul 18 04:27 input.tar.gz
[2023-07-18 04:55:19] -rw-r--r-- 2 m m 37658468 Jul 18 04:27 ATLAS.root_0
[2023-07-18 04:55:19] -rw-r--r-- 2 m m 17604 Jul 18 04:27 start_atlas.sh
[2023-07-18 04:55:19] -rw------- 1 m m 2054600 Jul 18 04:48 HITS.pool.root.1
[2023-07-18 04:55:19] -rw------- 1 m m 2447360 Jul 18 04:55 result.tar.gz
04:55:21 (22924): run_atlas exited; CPU time 852.662232
04:55:21 (22924): called boinc_finish(0)
</stderr_txt>
]]>
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