Name | Bk9MDmGxtg3n7Olcko1bjSoqABFKDmABFKDm7AsVDmIhNKDmz4GCVo_0 |
Workunit | 2319594 |
Created | 21 Jul 2023, 1:17:48 UTC |
Sent | 21 Jul 2023, 1:23:56 UTC |
Report deadline | 28 Jul 2023, 1:23:56 UTC |
Received | 21 Jul 2023, 1:48:10 UTC |
Server state | Over |
Outcome | Success |
Client state | Done |
Exit status | 0 (0x00000000) |
Computer ID | 1498 |
Run time | 21 min 40 sec |
CPU time | 8 min 50 sec |
Validate state | Valid |
Credit | 14.52 |
Device peak FLOPS | 13.02 GFLOPS |
Application version | ATLAS Simulation v3.01 (native_mt) x86_64-pc-linux-gnu |
Peak working set size | 1.50 GB |
Peak swap size | 2.12 GB |
Peak disk usage | 80.00 MB |
<core_client_version>7.4.25</core_client_version> <![CDATA[ <stderr_txt> 02:25:17 (19994): wrapper (7.7.26015): starting 02:25:17 (19994): wrapper: running run_atlas (--nthreads 4) [2023-07-21 02:25:17] Arguments: --nthreads 4 [2023-07-21 02:25:17] Threads: 4 [2023-07-21 02:25:17] Checking for CVMFS [2023-07-21 02:25:17] Probing /cvmfs/atlas.cern.ch... OK [2023-07-21 02:25:17] Probing /cvmfs/atlas-condb.cern.ch... OK [2023-07-21 02:25:17] Running cvmfs_config stat atlas.cern.ch [2023-07-21 02:25:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE [2023-07-21 02:25:17] 2.9.0.0 2925 59 44764 121520 2 84 3279171 4194304 0 130560 0 191827 98.640 250460 384 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.100.152:3128 1 [2023-07-21 02:25:17] CVMFS is ok [2023-07-21 02:25:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 [2023-07-21 02:25:17] Checking for apptainer binary... [2023-07-21 02:25:17] Using apptainer found in PATH at /usr/bin/apptainer [2023-07-21 02:25:17] Running /usr/bin/apptainer --version [2023-07-21 02:25:17] apptainer version 1.0.3 [2023-07-21 02:25:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname [2023-07-21 02:25:17] TeeC16 [2023-07-21 02:25:17] apptainer works [2023-07-21 02:25:17] Set ATHENA_PROC_NUMBER=4 [2023-07-21 02:25:17] Set ATHENA_CORE_NUMBER=4 [2023-07-21 02:25:17] Starting ATLAS job with PandaID=5909349183 [2023-07-21 02:25:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/m/BOINC/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh [2023-07-21 02:46:55] *** The last 200 lines of the pilot log: *** [2023-07-21 02:46:55] 2023-07-21 01:46:00,177 | INFO | maximum number of monitored processes: 5 [2023-07-21 02:46:55] 2023-07-21 01:46:02,129 | INFO | [attempt=2/3] loading data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json [2023-07-21 02:46:55] 2023-07-21 01:46:02,268 | WARNING | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: [2023-07-21 02:46:55] 2023-07-21 01:46:02,268 | INFO | will try again after 22s.. [2023-07-21 02:46:55] 2023-07-21 01:46:02,680 | INFO | monitor loop #188: job 0:5909349183 is in state 'stageout' [2023-07-21 02:46:55] 2023-07-21 01:46:02,719 | INFO | number of running child processes to parent process 30584: 1 [2023-07-21 02:46:55] 2023-07-21 01:46:02,720 | INFO | maximum number of monitored processes: 5 [2023-07-21 02:46:55] 2023-07-21 01:46:05,221 | INFO | monitor loop #189: job 0:5909349183 is in state 'stageout' [2023-07-21 02:46:55] 2023-07-21 01:46:05,256 | INFO | number of running child processes to parent process 30584: 1 [2023-07-21 02:46:55] 2023-07-21 01:46:05,256 | INFO | maximum number of monitored processes: 5 [2023-07-21 02:46:55] 2023-07-21 01:46:07,759 | INFO | monitor loop #190: job 0:5909349183 is in state 'stageout' [2023-07-21 02:46:55] 2023-07-21 01:46:07,805 | INFO | number of running child processes to parent process 30584: 1 [2023-07-21 02:46:55] 2023-07-21 01:46:07,805 | INFO | maximum number of monitored processes: 5 [2023-07-21 02:46:55] 2023-07-21 01:46:10,308 | INFO | monitor loop #191: job 0:5909349183 is in state 'stageout' [2023-07-21 02:46:55] 2023-07-21 01:46:10,348 | INFO | number of running child processes to parent process 30584: 1 [2023-07-21 02:46:55] 2023-07-21 01:46:10,348 | INFO | maximum number of monitored processes: 5 [2023-07-21 02:46:55] 2023-07-21 01:46:12,849 | INFO | monitor loop #192: job 0:5909349183 is in state 'stageout' [2023-07-21 02:46:55] 2023-07-21 01:46:12,892 | INFO | number of running child processes to parent process 30584: 1 [2023-07-21 02:46:55] 2023-07-21 01:46:12,893 | INFO | maximum number of monitored processes: 5 [2023-07-21 02:46:55] 2023-07-21 01:46:15,396 | INFO | monitor loop #193: job 0:5909349183 is in state 'stageout' [2023-07-21 02:46:55] 2023-07-21 01:46:15,436 | INFO | number of running child processes to parent process 30584: 1 [2023-07-21 02:46:55] 2023-07-21 01:46:15,437 | INFO | maximum number of monitored processes: 5 [2023-07-21 02:46:55] 2023-07-21 01:46:17,940 | INFO | monitor loop #194: job 0:5909349183 is in state 'stageout' [2023-07-21 02:46:55] 2023-07-21 01:46:17,975 | INFO | number of running child processes to parent process 30584: 1 [2023-07-21 02:46:55] 2023-07-21 01:46:17,976 | INFO | maximum number of monitored processes: 5 [2023-07-21 02:46:55] 2023-07-21 01:46:20,479 | INFO | monitor loop #195: job 0:5909349183 is in state 'stageout' [2023-07-21 02:46:55] 2023-07-21 01:46:20,525 | INFO | number of running child processes to parent process 30584: 1 [2023-07-21 02:46:55] 2023-07-21 01:46:20,525 | INFO | maximum number of monitored processes: 5 [2023-07-21 02:46:55] 2023-07-21 01:46:23,028 | INFO | monitor loop #196: job 0:5909349183 is in state 'stageout' [2023-07-21 02:46:55] 2023-07-21 01:46:23,064 | INFO | number of running child processes to parent process 30584: 1 [2023-07-21 02:46:55] 2023-07-21 01:46:23,064 | INFO | maximum number of monitored processes: 5 [2023-07-21 02:46:55] 2023-07-21 01:46:24,365 | INFO | [attempt=3/3] loading data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json [2023-07-21 02:46:55] 2023-07-21 01:46:24,520 | WARNING | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: [2023-07-21 02:46:55] 2023-07-21 01:46:24,520 | WARNING | cache file=/home/m/BOINC/slots/1/agis_ddmendpoints.agis.ALL.json is not available: [Errno 2] No such file or directory: '/home/m/BOINC/slots/1/agis_ddmendpoints.ag [2023-07-21 02:46:55] 2023-07-21 01:46:24,568 | INFO | transferring file 6ba69798-7a67-4c99-a309-4dff36901a7d_70778.1.job.log.tgz from /home/m/BOINC/slots/1/PanDA_Pilot-5909349183/6ba69798-7a67-4c99-a309-4dff36901a7d_7 [2023-07-21 02:46:55] 2023-07-21 01:46:24,568 | INFO | executing command: /usr/bin/env mv /home/m/BOINC/slots/1/PanDA_Pilot-5909349183/6ba69798-7a67-4c99-a309-4dff36901a7d_70778.1.job.log.tgz /home/m/BOINC/slots/1/6ba6 [2023-07-21 02:46:55] 2023-07-21 01:46:24,583 | INFO | Adding to output.list: 6ba69798-7a67-4c99-a309-4dff36901a7d_70778.1.job.log.tgz davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/ae/19/6ba69798-7a67- [2023-07-21 02:46:55] 2023-07-21 01:46:24,584 | INFO | summary of transferred files: [2023-07-21 02:46:55] 2023-07-21 01:46:24,584 | INFO | -- lfn=6ba69798-7a67-4c99-a309-4dff36901a7d_70778.1.job.log.tgz, status_code=0, status=transferred [2023-07-21 02:46:55] 2023-07-21 01:46:24,584 | INFO | stage-out finished correctly [2023-07-21 02:46:55] 2023-07-21 01:46:25,411 | INFO | finished stage-out for finished payload, adding job to finished_jobs queue [2023-07-21 02:46:55] 2023-07-21 01:46:25,468 | INFO | job 5909349183 has state=finished [2023-07-21 02:46:55] 2023-07-21 01:46:25,469 | INFO | preparing for final server update for job 5909349183 in state='finished' [2023-07-21 02:46:55] 2023-07-21 01:46:25,469 | INFO | this job has now completed (state=finished) [2023-07-21 02:46:55] 2023-07-21 01:46:25,469 | INFO | pilot will not update the server (heartbeat message will be written to file) [2023-07-21 02:46:55] 2023-07-21 01:46:25,469 | INFO | job 5909349183 has finished - writing final server update [2023-07-21 02:46:55] 2023-07-21 01:46:25,470 | WARNING | wrong length of table data, x=[1689903255.0, 1689903316.0, 1689903377.0, 1689903438.0, 1689903499.0], y=[1642784.0, 1647650.0, 1654767.0, 1660724.0, 1663790.0] (mu [2023-07-21 02:46:55] 2023-07-21 01:46:25,471 | INFO | total number of processed events: 2 (read) [2023-07-21 02:46:55] 2023-07-21 01:46:25,490 | INFO | executing command: lscpu [2023-07-21 02:46:55] 2023-07-21 01:46:25,503 | INFO | found 2 cores (2 cores per socket, 1 sockets) [2023-07-21 02:46:55] 2023-07-21 01:46:25,503 | INFO | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo [2023-07-21 02:46:55] 2023-07-21 01:46:25,525 | INFO | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup [2023-07-21 02:46:55] 2023-07-21 01:46:25,565 | INFO | monitor loop #197: job 0:5909349183 is in state 'finished' [2023-07-21 02:46:55] 2023-07-21 01:46:25,566 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-07-21 02:46:55] 2023-07-21 01:46:28,069 | INFO | monitor loop #198: job 0:5909349183 is in state 'finished' [2023-07-21 02:46:55] 2023-07-21 01:46:28,069 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-07-21 02:46:55] 2023-07-21 01:46:30,572 | INFO | monitor loop #199: job 0:5909349183 is in state 'finished' [2023-07-21 02:46:55] 2023-07-21 01:46:30,573 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-07-21 02:46:55] 2023-07-21 01:46:33,077 | INFO | monitor loop #200: job 0:5909349183 is in state 'finished' [2023-07-21 02:46:55] 2023-07-21 01:46:33,078 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-07-21 02:46:55] 2023-07-21 01:46:33,432 | INFO | CPU arch script returned: x86-64-v2 [2023-07-21 02:46:55] 2023-07-21 01:46:33,433 | INFO | using path: /home/m/BOINC/slots/1/PanDA_Pilot-5909349183/memory_monitor_summary.json (trf name=prmon) [2023-07-21 02:46:55] 2023-07-21 01:46:33,434 | INFO | extracted standard info from prmon json [2023-07-21 02:46:55] 2023-07-21 01:46:33,434 | INFO | extracted standard memory fields from prmon json [2023-07-21 02:46:55] 2023-07-21 01:46:33,434 | INFO | .............................. [2023-07-21 02:46:55] 2023-07-21 01:46:33,434 | INFO | . Timing measurements: [2023-07-21 02:46:55] 2023-07-21 01:46:33,434 | INFO | . get job = 68 s [2023-07-21 02:46:55] 2023-07-21 01:46:33,434 | INFO | . initial setup = 44 s [2023-07-21 02:46:55] 2023-07-21 01:46:33,435 | INFO | . payload setup = 7 s [2023-07-21 02:46:55] 2023-07-21 01:46:33,435 | INFO | . stage-in = 85 s [2023-07-21 02:46:55] 2023-07-21 01:46:33,435 | INFO | . payload execution = 683 s [2023-07-21 02:46:55] 2023-07-21 01:46:33,435 | INFO | . stage-out = 354 s [2023-07-21 02:46:55] 2023-07-21 01:46:33,435 | INFO | .............................. [2023-07-21 02:46:55] 2023-07-21 01:46:33,537 | INFO | [2023-07-21 02:46:55] 2023-07-21 01:46:33,537 | INFO | job summary report [2023-07-21 02:46:55] 2023-07-21 01:46:33,538 | INFO | -------------------------------------------------- [2023-07-21 02:46:55] 2023-07-21 01:46:33,538 | INFO | PanDA job id: 5909349183 [2023-07-21 02:46:55] 2023-07-21 01:46:33,538 | INFO | task id: NULL [2023-07-21 02:46:55] 2023-07-21 01:46:33,538 | INFO | errors: (none) [2023-07-21 02:46:55] 2023-07-21 01:46:33,538 | INFO | status: LOG_TRANSFER = DONE [2023-07-21 02:46:55] 2023-07-21 01:46:33,538 | INFO | pilot state: finished [2023-07-21 02:46:55] 2023-07-21 01:46:33,538 | INFO | transexitcode: 0 [2023-07-21 02:46:55] 2023-07-21 01:46:33,538 | INFO | exeerrorcode: 0 [2023-07-21 02:46:55] 2023-07-21 01:46:33,538 | INFO | exeerrordiag: [2023-07-21 02:46:55] 2023-07-21 01:46:33,538 | INFO | exitcode: 0 [2023-07-21 02:46:55] 2023-07-21 01:46:33,538 | INFO | exitmsg: OK [2023-07-21 02:46:55] 2023-07-21 01:46:33,538 | INFO | cpuconsumptiontime: 541 s [2023-07-21 02:46:55] 2023-07-21 01:46:33,538 | INFO | nevents: 2 [2023-07-21 02:46:55] 2023-07-21 01:46:33,538 | INFO | neventsw: 0 [2023-07-21 02:46:55] 2023-07-21 01:46:33,538 | INFO | pid: 30584 [2023-07-21 02:46:55] 2023-07-21 01:46:33,538 | INFO | pgrp: 30584 [2023-07-21 02:46:55] 2023-07-21 01:46:33,539 | INFO | corecount: 4 [2023-07-21 02:46:55] 2023-07-21 01:46:33,539 | INFO | event service: False [2023-07-21 02:46:55] 2023-07-21 01:46:33,539 | INFO | sizes: {0: 2456331, 11: 2456477, 22: 2456505, 32: 2456533, 43: 2456561, 53: 2456589, 64: 2456745, 75: 2456801, 85: 2456829, 90: 2456917, 96: 2456945, 695: 2476878, [2023-07-21 02:46:55] 2023-07-21 01:46:33,539 | INFO | -------------------------------------------------- [2023-07-21 02:46:55] 2023-07-21 01:46:33,539 | INFO | [2023-07-21 02:46:55] 2023-07-21 01:46:33,539 | INFO | executing command: ls -lF /home/m/BOINC/slots/1 [2023-07-21 02:46:55] 2023-07-21 01:46:33,553 | INFO | queue jobs had 0 job(s) [purged] [2023-07-21 02:46:55] 2023-07-21 01:46:33,554 | INFO | queue payloads had 0 job(s) [purged] [2023-07-21 02:46:55] 2023-07-21 01:46:33,554 | INFO | queue data_in had 0 job(s) [purged] [2023-07-21 02:46:55] 2023-07-21 01:46:33,554 | INFO | queue data_out had 0 job(s) [purged] [2023-07-21 02:46:55] 2023-07-21 01:46:33,554 | INFO | queue current_data_in had 0 job(s) [purged] [2023-07-21 02:46:55] 2023-07-21 01:46:33,554 | INFO | queue validated_jobs had 0 job(s) [purged] [2023-07-21 02:46:55] 2023-07-21 01:46:33,554 | INFO | queue validated_payloads had 0 job(s) [purged] [2023-07-21 02:46:55] 2023-07-21 01:46:33,554 | INFO | queue monitored_payloads had 0 job(s) [purged] [2023-07-21 02:46:55] 2023-07-21 01:46:33,554 | INFO | queue finished_jobs had 0 job(s) [purged] [2023-07-21 02:46:55] 2023-07-21 01:46:33,554 | INFO | queue finished_payloads had 0 job(s) [purged] [2023-07-21 02:46:55] 2023-07-21 01:46:33,554 | INFO | queue finished_data_in had 1 job(s) [purged] [2023-07-21 02:46:55] 2023-07-21 01:46:33,554 | INFO | queue finished_data_out had 0 job(s) [purged] [2023-07-21 02:46:55] 2023-07-21 01:46:33,554 | INFO | queue failed_jobs had 0 job(s) [purged] [2023-07-21 02:46:55] 2023-07-21 01:46:33,554 | INFO | queue failed_payloads had 0 job(s) [purged] [2023-07-21 02:46:55] 2023-07-21 01:46:33,554 | INFO | queue failed_data_in had 0 job(s) [purged] [2023-07-21 02:46:55] 2023-07-21 01:46:33,555 | INFO | queue failed_data_out had 0 job(s) [purged] [2023-07-21 02:46:55] 2023-07-21 01:46:33,555 | INFO | queue completed_jobs had 0 job(s) [purged] [2023-07-21 02:46:55] 2023-07-21 01:46:33,555 | INFO | queue completed_jobids has 1 job(s) [2023-07-21 02:46:55] 2023-07-21 01:46:33,555 | INFO | queue realtimelog_payloads had 0 job(s) [purged] [2023-07-21 02:46:55] 2023-07-21 01:46:33,555 | INFO | queue messages had 0 job(s) [purged] [2023-07-21 02:46:55] 2023-07-21 01:46:33,555 | INFO | job 5909349183 has completed (purged errors) [2023-07-21 02:46:55] 2023-07-21 01:46:33,555 | INFO | overall cleanup function is called [2023-07-21 02:46:55] 2023-07-21 01:46:34,561 | INFO | --- collectZombieJob: --- 10, [30584] [2023-07-21 02:46:55] 2023-07-21 01:46:34,561 | INFO | zombie collector trying to kill pid 30584 [2023-07-21 02:46:55] 2023-07-21 01:46:34,562 | INFO | harmless exception when collecting zombies: [Errno 10] No child processes [2023-07-21 02:46:55] 2023-07-21 01:46:35,567 | INFO | collected zombie processes [2023-07-21 02:46:55] 2023-07-21 01:46:35,567 | INFO | will now attempt to kill all subprocesses of pid=30584 [2023-07-21 02:46:55] 2023-07-21 01:46:35,604 | INFO | process IDs to be killed: [30584] (in reverse order) [2023-07-21 02:46:55] 2023-07-21 01:46:35,639 | WARNING | found no corresponding commands to process id(s) [2023-07-21 02:46:55] 2023-07-21 01:46:35,639 | INFO | Do not look for orphan processes in BOINC jobs [2023-07-21 02:46:55] 2023-07-21 01:46:35,640 | INFO | ready for new job [2023-07-21 02:46:55] 2023-07-21 01:46:35,640 | INFO | pilot has finished with previous job - re-establishing logging [2023-07-21 02:46:55] 2023-07-21 01:46:35,640 | INFO | ************************************* [2023-07-21 02:46:55] 2023-07-21 01:46:35,640 | INFO | *** PanDA Pilot version 3.6.4.7 *** [2023-07-21 02:46:55] 2023-07-21 01:46:35,640 | INFO | ************************************* [2023-07-21 02:46:55] 2023-07-21 01:46:35,641 | INFO | [2023-07-21 02:46:55] 2023-07-21 01:46:35,657 | INFO | architecture information: [2023-07-21 02:46:55] 2023-07-21 01:46:35,658 | INFO | executing command: cat /etc/os-release [2023-07-21 02:46:55] 2023-07-21 01:46:35,669 | INFO | cat /etc/os-release: [2023-07-21 02:46:55] NAME="CentOS Linux" [2023-07-21 02:46:55] VERSION="7 (Core)" [2023-07-21 02:46:55] ID="centos" [2023-07-21 02:46:55] ID_LIKE="rhel fedora" [2023-07-21 02:46:55] VERSION_ID="7" [2023-07-21 02:46:55] PRETTY_NAME="CentOS Linux 7 (Core)" [2023-07-21 02:46:55] ANSI_COLOR="0;31" [2023-07-21 02:46:55] CPE_NAME="cpe:/o:centos:centos:7" [2023-07-21 02:46:55] HOME_URL="https://www.centos.org/" [2023-07-21 02:46:55] BUG_REPORT_URL="https://bugs.centos.org/" [2023-07-21 02:46:55] [2023-07-21 02:46:55] CENTOS_MANTISBT_PROJECT="CentOS-7" [2023-07-21 02:46:55] CENTOS_MANTISBT_PROJECT_VERSION="7" [2023-07-21 02:46:55] REDHAT_SUPPORT_PRODUCT="centos" [2023-07-21 02:46:55] REDHAT_SUPPORT_PRODUCT_VERSION="7" [2023-07-21 02:46:55] [2023-07-21 02:46:55] 2023-07-21 01:46:35,669 | INFO | ************************************* [2023-07-21 02:46:55] 2023-07-21 01:46:36,172 | INFO | executing command: df -mP /home/m/BOINC/slots/1 [2023-07-21 02:46:55] 2023-07-21 01:46:36,184 | INFO | sufficient remaining disk space (423724318720 B) [2023-07-21 02:46:55] 2023-07-21 01:46:36,185 | WARNING | since timefloor is set to 0, pilot was only allowed to run one job [2023-07-21 02:46:55] 2023-07-21 01:46:36,185 | WARNING | setting graceful_stop since proceed_with_getjob() returned False (pilot will end) [2023-07-21 02:46:55] 2023-07-21 01:46:36,185 | WARNING | aborting monitor loop since graceful_stop has been set (timing out remaining threads) [2023-07-21 02:46:55] 2023-07-21 01:46:36,185 | WARNING | data:queue_monitoring:received graceful stop - abort after this iteration [2023-07-21 02:46:55] 2023-07-21 01:46:36,185 | INFO | found 0 job(s) in 20 queues [2023-07-21 02:46:55] 2023-07-21 01:46:36,185 | WARNING | pilot monitor received instruction that args.graceful_stop has been set [2023-07-21 02:46:55] 2023-07-21 01:46:36,185 | WARNING | will wait for a maximum of 300 s for threads to finish [2023-07-21 02:46:55] 2023-07-21 01:46:36,586 | WARNING | job:job_monitor:received graceful stop - abort after this iteration [2023-07-21 02:46:55] 2023-07-21 01:46:36,586 | INFO | aborting loop [2023-07-21 02:46:55] 2023-07-21 01:46:37,190 | INFO | [job] retrieve thread has finished [2023-07-21 02:46:55] 2023-07-21 01:46:37,278 | INFO | [job] control thread has finished [2023-07-21 02:46:55] 2023-07-21 01:46:37,378 | INFO | [data] control thread has finished [2023-07-21 02:46:55] 2023-07-21 01:46:37,591 | INFO | [payload] failed_post thread has finished [2023-07-21 02:46:55] 2023-07-21 01:46:37,591 | INFO | [job] job monitor thread has finished [2023-07-21 02:46:55] 2023-07-21 01:46:37,659 | WARNING | data:copytool_out:received graceful stop - abort after this iteration [2023-07-21 02:46:55] 2023-07-21 01:46:37,694 | INFO | [job] validate thread has finished [2023-07-21 02:46:55] 2023-07-21 01:46:37,779 | INFO | [data] copytool_in thread has finished [2023-07-21 02:46:55] 2023-07-21 01:46:37,879 | INFO | [job] create_data_payload thread has finished [2023-07-21 02:46:55] 2023-07-21 01:46:38,032 | INFO | [payload] execute_payloads thread has finished [2023-07-21 02:46:55] 2023-07-21 01:46:38,109 | INFO | [payload] validate_pre thread has finished [2023-07-21 02:46:55] 2023-07-21 01:46:38,444 | INFO | [payload] control thread has finished [2023-07-21 02:46:55] 2023-07-21 01:46:38,548 | WARNING | job:queue_monitor:received graceful stop - abort after this iteration [2023-07-21 02:46:55] 2023-07-21 01:46:38,573 | INFO | [payload] validate_post thread has finished [2023-07-21 02:46:55] 2023-07-21 01:46:39,553 | INFO | [job] queue monitor thread has finished [2023-07-21 02:46:55] 2023-07-21 01:46:39,664 | INFO | [data] copytool_out thread has finished [2023-07-21 02:46:55] 2023-07-21 01:46:40,191 | INFO | [data] queue_monitor thread has finished [2023-07-21 02:46:55] 2023-07-21 01:46:47,153 | INFO | job.realtimelogging is not enabled [2023-07-21 02:46:55] 2023-07-21 01:46:48,159 | INFO | [payload] run_realtimelog thread has finished [2023-07-21 02:46:55] 2023-07-21 01:46:49,945 | INFO | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140402235639616)>', '<ExcThread(monitor, started 140401667204864)>'] [2023-07-21 02:46:55] 2023-07-21 01:46:50,241 | WARNING | job_aborted has been set - aborting pilot monitoring [2023-07-21 02:46:55] 2023-07-21 01:46:50,241 | INFO | [monitor] control thread has ended [2023-07-21 02:46:55] 2023-07-21 01:46:54,969 | INFO | end of generic workflow (traces error code: 0) [2023-07-21 02:46:55] 2023-07-21 01:46:54,970 | INFO | traces error code: 0 [2023-07-21 02:46:55] 2023-07-21 01:46:54,970 | INFO | pilot has finished (exit code=0, shell exit code=0) [2023-07-21 02:46:55] 2023-07-21 01:46:55,033 [wrapper] ==== pilot stdout END ==== [2023-07-21 02:46:55] 2023-07-21 01:46:55,036 [wrapper] ==== wrapper stdout RESUME ==== [2023-07-21 02:46:55] 2023-07-21 01:46:55,039 [wrapper] pilotpid: 23147 [2023-07-21 02:46:55] 2023-07-21 01:46:55,047 [wrapper] Pilot exit status: 0 [2023-07-21 02:46:55] 2023-07-21 01:46:55,058 [wrapper] pandaids: 5909349183 [2023-07-21 02:46:55] 2023-07-21 01:46:55,064 [wrapper] apfmon messages muted [2023-07-21 02:46:55] 2023-07-21 01:46:55,067 [wrapper] Test setup, not cleaning [2023-07-21 02:46:55] 2023-07-21 01:46:55,071 [wrapper] ==== wrapper stdout END ==== [2023-07-21 02:46:55] 2023-07-21 01:46:55,074 [wrapper] ==== wrapper stderr END ==== [2023-07-21 02:46:55] 2023-07-21 01:46:55,080 [wrapper] wrapperexiting ec=0, duration=1298 [2023-07-21 02:46:55] 2023-07-21 01:46:55,083 [wrapper] apfmon messages muted [2023-07-21 02:46:55] *** Error codes and diagnostics *** [2023-07-21 02:46:55] "exeErrorCode": 0, [2023-07-21 02:46:55] "exeErrorDiag": "", [2023-07-21 02:46:55] "pilotErrorCode": 0, [2023-07-21 02:46:55] "pilotErrorDiag": "", [2023-07-21 02:46:55] *** Listing of results directory *** [2023-07-21 02:46:55] total 43364 [2023-07-21 02:46:55] -rw-r--r-- 1 m m 418016 Jul 21 01:30 pilot3.tar.gz [2023-07-21 02:46:55] -rwx------ 1 m m 27277 Jul 21 02:17 runpilot2-wrapper.sh [2023-07-21 02:46:55] -rw-r--r-- 1 m m 4388 Jul 21 02:17 queuedata.json [2023-07-21 02:46:55] -rw-rw-r-- 1 m m 107 Jul 21 02:25 wrapper_26015_x86_64-pc-linux-gnu [2023-07-21 02:46:55] -rwxr-xr-x 1 m m 7986 Jul 21 02:25 run_atlas [2023-07-21 02:46:55] -rw-rw-r-- 1 m m 112 Jul 21 02:25 job.xml [2023-07-21 02:46:55] -rw-rw-r-- 1 m m 5728 Jul 21 02:25 init_data.xml [2023-07-21 02:46:55] -rw-r--r-- 2 m m 37224345 Jul 21 02:25 EVNT.04972714._000026.pool.root.1 [2023-07-21 02:46:55] -rw-r--r-- 2 m m 17604 Jul 21 02:25 start_atlas.sh [2023-07-21 02:46:55] drwxrwx--x 2 m m 4096 Jul 21 02:25 shared [2023-07-21 02:46:55] -rw-r--r-- 2 m m 428865 Jul 21 02:25 input.tar.gz [2023-07-21 02:46:55] -rw-rw-r-- 1 m m 0 Jul 21 02:25 boinc_lockfile [2023-07-21 02:46:55] -rw-rw-r-- 1 m m 2758 Jul 21 02:25 pandaJob.out [2023-07-21 02:46:55] -rw------- 1 m m 424 Jul 21 02:25 setup.sh.local [2023-07-21 02:46:55] -rw------- 1 m m 1015601 Jul 21 02:25 agis_schedconf.cvmfs.json [2023-07-21 02:46:55] -rw------- 1 m m 1370854 Jul 21 02:26 cric_ddmendpoints.json [2023-07-21 02:46:55] drwx------ 4 m m 4096 Jul 21 02:27 pilot3 [2023-07-21 02:46:55] -rw------- 1 m m 1520105 Jul 21 02:40 output.1.6ba69798-7a67-4c99-a309-4dff36901a7d_70778.pool.root [2023-07-21 02:46:55] -rw------- 1 m m 1014 Jul 21 02:40 memory_monitor_summary.json [2023-07-21 02:46:55] -rw-rw-r-- 1 m m 532 Jul 21 02:40 boinc_task_state.xml [2023-07-21 02:46:55] -rw------- 1 m m 160049 Jul 21 02:43 6ba69798-7a67-4c99-a309-4dff36901a7d_70778.1.job.log.tgz [2023-07-21 02:46:55] -rw------- 1 m m 6648 Jul 21 02:46 heartbeat.json [2023-07-21 02:46:55] -rw-rw-r-- 1 m m 25 Jul 21 02:46 wrapper_checkpoint.txt [2023-07-21 02:46:55] -rw-rw-r-- 1 m m 8192 Jul 21 02:46 boinc_mmap_file [2023-07-21 02:46:55] -rw------- 1 m m 4092 Jul 21 02:46 pilotlog.txt [2023-07-21 02:46:55] -rw------- 1 m m 183236 Jul 21 02:46 6ba69798-7a67-4c99-a309-4dff36901a7d_70778.1.job.log [2023-07-21 02:46:55] -rw------- 1 m m 464 Jul 21 02:46 output.list [2023-07-21 02:46:55] -rw-rw-r-- 1 m m 748 Jul 21 02:46 runtime_log [2023-07-21 02:46:55] -rw------- 1 m m 1884160 Jul 21 02:46 result.tar.gz [2023-07-21 02:46:55] -rw-rw-r-- 1 m m 11905 Jul 21 02:46 runtime_log.err [2023-07-21 02:46:55] -rw------- 1 m m 627 Jul 21 02:46 Bk9MDmGxtg3n7Olcko1bjSoqABFKDmABFKDm7AsVDmIhNKDmz4GCVo.diag [2023-07-21 02:46:55] -rw-rw-r-- 1 m m 22720 Jul 21 02:46 stderr.txt [2023-07-21 02:46:55] HITS file was successfully produced: [2023-07-21 02:46:55] -rw------- 1 m m 1520105 Jul 21 02:40 shared/HITS.pool.root.1 [2023-07-21 02:46:55] *** Contents of shared directory: *** [2023-07-21 02:46:55] total 40120 [2023-07-21 02:46:55] -rw-r--r-- 2 m m 37224345 Jul 21 02:25 ATLAS.root_0 [2023-07-21 02:46:55] -rw-r--r-- 2 m m 17604 Jul 21 02:25 start_atlas.sh [2023-07-21 02:46:55] -rw-r--r-- 2 m m 428865 Jul 21 02:25 input.tar.gz [2023-07-21 02:46:55] -rw------- 1 m m 1520105 Jul 21 02:40 HITS.pool.root.1 [2023-07-21 02:46:55] -rw------- 1 m m 1884160 Jul 21 02:46 result.tar.gz 02:46:56 (19994): run_atlas exited; CPU time 530.232092 02:46:56 (19994): called boinc_finish(0) </stderr_txt> ]]>
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