Name Bk9MDmGxtg3n7Olcko1bjSoqABFKDmABFKDm7AsVDmIhNKDmz4GCVo_0
Workunit 2319594
Created 21 Jul 2023, 1:17:48 UTC
Sent 21 Jul 2023, 1:23:56 UTC
Report deadline 28 Jul 2023, 1:23:56 UTC
Received 21 Jul 2023, 1:48:10 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 1498
Run time 21 min 40 sec
CPU time 8 min 50 sec
Validate state Valid
Credit 14.52
Device peak FLOPS 13.02 GFLOPS
Application version ATLAS Simulation v3.01 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 1.50 GB
Peak swap size 2.12 GB
Peak disk usage 80.00 MB

Stderr output

<core_client_version>7.4.25</core_client_version>
<![CDATA[
<stderr_txt>
02:25:17 (19994): wrapper (7.7.26015): starting
02:25:17 (19994): wrapper: running run_atlas (--nthreads 4)
[2023-07-21 02:25:17] Arguments: --nthreads 4
[2023-07-21 02:25:17] Threads: 4
[2023-07-21 02:25:17] Checking for CVMFS
[2023-07-21 02:25:17] Probing /cvmfs/atlas.cern.ch... OK
[2023-07-21 02:25:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2023-07-21 02:25:17] Running cvmfs_config stat atlas.cern.ch
[2023-07-21 02:25:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2023-07-21 02:25:17] 2.9.0.0 2925 59 44764 121520 2 84 3279171 4194304 0 130560 0 191827 98.640 250460 384 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.100.152:3128 1
[2023-07-21 02:25:17] CVMFS is ok
[2023-07-21 02:25:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2023-07-21 02:25:17] Checking for apptainer binary...
[2023-07-21 02:25:17] Using apptainer found in PATH at /usr/bin/apptainer
[2023-07-21 02:25:17] Running /usr/bin/apptainer --version
[2023-07-21 02:25:17] apptainer version 1.0.3
[2023-07-21 02:25:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2023-07-21 02:25:17] TeeC16
[2023-07-21 02:25:17] apptainer works
[2023-07-21 02:25:17] Set ATHENA_PROC_NUMBER=4
[2023-07-21 02:25:17] Set ATHENA_CORE_NUMBER=4
[2023-07-21 02:25:17] Starting ATLAS job with PandaID=5909349183
[2023-07-21 02:25:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/m/BOINC/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2023-07-21 02:46:55]  *** The last 200 lines of the pilot log: ***
[2023-07-21 02:46:55] 2023-07-21 01:46:00,177 | INFO     | maximum number of monitored processes: 5
[2023-07-21 02:46:55] 2023-07-21 01:46:02,129 | INFO     | [attempt=2/3] loading data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json
[2023-07-21 02:46:55] 2023-07-21 01:46:02,268 | WARNING  | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: 
[2023-07-21 02:46:55] 2023-07-21 01:46:02,268 | INFO     | will try again after 22s..
[2023-07-21 02:46:55] 2023-07-21 01:46:02,680 | INFO     | monitor loop #188: job 0:5909349183 is in state 'stageout'
[2023-07-21 02:46:55] 2023-07-21 01:46:02,719 | INFO     | number of running child processes to parent process 30584: 1
[2023-07-21 02:46:55] 2023-07-21 01:46:02,720 | INFO     | maximum number of monitored processes: 5
[2023-07-21 02:46:55] 2023-07-21 01:46:05,221 | INFO     | monitor loop #189: job 0:5909349183 is in state 'stageout'
[2023-07-21 02:46:55] 2023-07-21 01:46:05,256 | INFO     | number of running child processes to parent process 30584: 1
[2023-07-21 02:46:55] 2023-07-21 01:46:05,256 | INFO     | maximum number of monitored processes: 5
[2023-07-21 02:46:55] 2023-07-21 01:46:07,759 | INFO     | monitor loop #190: job 0:5909349183 is in state 'stageout'
[2023-07-21 02:46:55] 2023-07-21 01:46:07,805 | INFO     | number of running child processes to parent process 30584: 1
[2023-07-21 02:46:55] 2023-07-21 01:46:07,805 | INFO     | maximum number of monitored processes: 5
[2023-07-21 02:46:55] 2023-07-21 01:46:10,308 | INFO     | monitor loop #191: job 0:5909349183 is in state 'stageout'
[2023-07-21 02:46:55] 2023-07-21 01:46:10,348 | INFO     | number of running child processes to parent process 30584: 1
[2023-07-21 02:46:55] 2023-07-21 01:46:10,348 | INFO     | maximum number of monitored processes: 5
[2023-07-21 02:46:55] 2023-07-21 01:46:12,849 | INFO     | monitor loop #192: job 0:5909349183 is in state 'stageout'
[2023-07-21 02:46:55] 2023-07-21 01:46:12,892 | INFO     | number of running child processes to parent process 30584: 1
[2023-07-21 02:46:55] 2023-07-21 01:46:12,893 | INFO     | maximum number of monitored processes: 5
[2023-07-21 02:46:55] 2023-07-21 01:46:15,396 | INFO     | monitor loop #193: job 0:5909349183 is in state 'stageout'
[2023-07-21 02:46:55] 2023-07-21 01:46:15,436 | INFO     | number of running child processes to parent process 30584: 1
[2023-07-21 02:46:55] 2023-07-21 01:46:15,437 | INFO     | maximum number of monitored processes: 5
[2023-07-21 02:46:55] 2023-07-21 01:46:17,940 | INFO     | monitor loop #194: job 0:5909349183 is in state 'stageout'
[2023-07-21 02:46:55] 2023-07-21 01:46:17,975 | INFO     | number of running child processes to parent process 30584: 1
[2023-07-21 02:46:55] 2023-07-21 01:46:17,976 | INFO     | maximum number of monitored processes: 5
[2023-07-21 02:46:55] 2023-07-21 01:46:20,479 | INFO     | monitor loop #195: job 0:5909349183 is in state 'stageout'
[2023-07-21 02:46:55] 2023-07-21 01:46:20,525 | INFO     | number of running child processes to parent process 30584: 1
[2023-07-21 02:46:55] 2023-07-21 01:46:20,525 | INFO     | maximum number of monitored processes: 5
[2023-07-21 02:46:55] 2023-07-21 01:46:23,028 | INFO     | monitor loop #196: job 0:5909349183 is in state 'stageout'
[2023-07-21 02:46:55] 2023-07-21 01:46:23,064 | INFO     | number of running child processes to parent process 30584: 1
[2023-07-21 02:46:55] 2023-07-21 01:46:23,064 | INFO     | maximum number of monitored processes: 5
[2023-07-21 02:46:55] 2023-07-21 01:46:24,365 | INFO     | [attempt=3/3] loading data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json
[2023-07-21 02:46:55] 2023-07-21 01:46:24,520 | WARNING  | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: 
[2023-07-21 02:46:55] 2023-07-21 01:46:24,520 | WARNING  | cache file=/home/m/BOINC/slots/1/agis_ddmendpoints.agis.ALL.json is not available: [Errno 2] No such file or directory: '/home/m/BOINC/slots/1/agis_ddmendpoints.ag
[2023-07-21 02:46:55] 2023-07-21 01:46:24,568 | INFO     | transferring file 6ba69798-7a67-4c99-a309-4dff36901a7d_70778.1.job.log.tgz from /home/m/BOINC/slots/1/PanDA_Pilot-5909349183/6ba69798-7a67-4c99-a309-4dff36901a7d_7
[2023-07-21 02:46:55] 2023-07-21 01:46:24,568 | INFO     | executing command: /usr/bin/env mv /home/m/BOINC/slots/1/PanDA_Pilot-5909349183/6ba69798-7a67-4c99-a309-4dff36901a7d_70778.1.job.log.tgz /home/m/BOINC/slots/1/6ba6
[2023-07-21 02:46:55] 2023-07-21 01:46:24,583 | INFO     | Adding to output.list: 6ba69798-7a67-4c99-a309-4dff36901a7d_70778.1.job.log.tgz davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/ae/19/6ba69798-7a67-
[2023-07-21 02:46:55] 2023-07-21 01:46:24,584 | INFO     | summary of transferred files:
[2023-07-21 02:46:55] 2023-07-21 01:46:24,584 | INFO     |  -- lfn=6ba69798-7a67-4c99-a309-4dff36901a7d_70778.1.job.log.tgz, status_code=0, status=transferred
[2023-07-21 02:46:55] 2023-07-21 01:46:24,584 | INFO     | stage-out finished correctly
[2023-07-21 02:46:55] 2023-07-21 01:46:25,411 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2023-07-21 02:46:55] 2023-07-21 01:46:25,468 | INFO     | job 5909349183 has state=finished
[2023-07-21 02:46:55] 2023-07-21 01:46:25,469 | INFO     | preparing for final server update for job 5909349183 in state='finished'
[2023-07-21 02:46:55] 2023-07-21 01:46:25,469 | INFO     | this job has now completed (state=finished)
[2023-07-21 02:46:55] 2023-07-21 01:46:25,469 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2023-07-21 02:46:55] 2023-07-21 01:46:25,469 | INFO     | job 5909349183 has finished - writing final server update
[2023-07-21 02:46:55] 2023-07-21 01:46:25,470 | WARNING  | wrong length of table data, x=[1689903255.0, 1689903316.0, 1689903377.0, 1689903438.0, 1689903499.0], y=[1642784.0, 1647650.0, 1654767.0, 1660724.0, 1663790.0] (mu
[2023-07-21 02:46:55] 2023-07-21 01:46:25,471 | INFO     | total number of processed events: 2 (read)
[2023-07-21 02:46:55] 2023-07-21 01:46:25,490 | INFO     | executing command: lscpu
[2023-07-21 02:46:55] 2023-07-21 01:46:25,503 | INFO     | found 2 cores (2 cores per socket, 1 sockets)
[2023-07-21 02:46:55] 2023-07-21 01:46:25,503 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2023-07-21 02:46:55] 2023-07-21 01:46:25,525 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2023-07-21 02:46:55] 2023-07-21 01:46:25,565 | INFO     | monitor loop #197: job 0:5909349183 is in state 'finished'
[2023-07-21 02:46:55] 2023-07-21 01:46:25,566 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-07-21 02:46:55] 2023-07-21 01:46:28,069 | INFO     | monitor loop #198: job 0:5909349183 is in state 'finished'
[2023-07-21 02:46:55] 2023-07-21 01:46:28,069 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-07-21 02:46:55] 2023-07-21 01:46:30,572 | INFO     | monitor loop #199: job 0:5909349183 is in state 'finished'
[2023-07-21 02:46:55] 2023-07-21 01:46:30,573 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-07-21 02:46:55] 2023-07-21 01:46:33,077 | INFO     | monitor loop #200: job 0:5909349183 is in state 'finished'
[2023-07-21 02:46:55] 2023-07-21 01:46:33,078 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-07-21 02:46:55] 2023-07-21 01:46:33,432 | INFO     | CPU arch script returned: x86-64-v2
[2023-07-21 02:46:55] 2023-07-21 01:46:33,433 | INFO     | using path: /home/m/BOINC/slots/1/PanDA_Pilot-5909349183/memory_monitor_summary.json (trf name=prmon)
[2023-07-21 02:46:55] 2023-07-21 01:46:33,434 | INFO     | extracted standard info from prmon json
[2023-07-21 02:46:55] 2023-07-21 01:46:33,434 | INFO     | extracted standard memory fields from prmon json
[2023-07-21 02:46:55] 2023-07-21 01:46:33,434 | INFO     | ..............................
[2023-07-21 02:46:55] 2023-07-21 01:46:33,434 | INFO     | . Timing measurements:
[2023-07-21 02:46:55] 2023-07-21 01:46:33,434 | INFO     | . get job = 68 s
[2023-07-21 02:46:55] 2023-07-21 01:46:33,434 | INFO     | . initial setup = 44 s
[2023-07-21 02:46:55] 2023-07-21 01:46:33,435 | INFO     | . payload setup = 7 s
[2023-07-21 02:46:55] 2023-07-21 01:46:33,435 | INFO     | . stage-in = 85 s
[2023-07-21 02:46:55] 2023-07-21 01:46:33,435 | INFO     | . payload execution = 683 s
[2023-07-21 02:46:55] 2023-07-21 01:46:33,435 | INFO     | . stage-out = 354 s
[2023-07-21 02:46:55] 2023-07-21 01:46:33,435 | INFO     | ..............................
[2023-07-21 02:46:55] 2023-07-21 01:46:33,537 | INFO     | 
[2023-07-21 02:46:55] 2023-07-21 01:46:33,537 | INFO     | job summary report
[2023-07-21 02:46:55] 2023-07-21 01:46:33,538 | INFO     | --------------------------------------------------
[2023-07-21 02:46:55] 2023-07-21 01:46:33,538 | INFO     | PanDA job id: 5909349183
[2023-07-21 02:46:55] 2023-07-21 01:46:33,538 | INFO     | task id: NULL
[2023-07-21 02:46:55] 2023-07-21 01:46:33,538 | INFO     | errors: (none)
[2023-07-21 02:46:55] 2023-07-21 01:46:33,538 | INFO     | status: LOG_TRANSFER = DONE 
[2023-07-21 02:46:55] 2023-07-21 01:46:33,538 | INFO     | pilot state: finished 
[2023-07-21 02:46:55] 2023-07-21 01:46:33,538 | INFO     | transexitcode: 0
[2023-07-21 02:46:55] 2023-07-21 01:46:33,538 | INFO     | exeerrorcode: 0
[2023-07-21 02:46:55] 2023-07-21 01:46:33,538 | INFO     | exeerrordiag: 
[2023-07-21 02:46:55] 2023-07-21 01:46:33,538 | INFO     | exitcode: 0
[2023-07-21 02:46:55] 2023-07-21 01:46:33,538 | INFO     | exitmsg: OK
[2023-07-21 02:46:55] 2023-07-21 01:46:33,538 | INFO     | cpuconsumptiontime: 541 s
[2023-07-21 02:46:55] 2023-07-21 01:46:33,538 | INFO     | nevents: 2
[2023-07-21 02:46:55] 2023-07-21 01:46:33,538 | INFO     | neventsw: 0
[2023-07-21 02:46:55] 2023-07-21 01:46:33,538 | INFO     | pid: 30584
[2023-07-21 02:46:55] 2023-07-21 01:46:33,538 | INFO     | pgrp: 30584
[2023-07-21 02:46:55] 2023-07-21 01:46:33,539 | INFO     | corecount: 4
[2023-07-21 02:46:55] 2023-07-21 01:46:33,539 | INFO     | event service: False
[2023-07-21 02:46:55] 2023-07-21 01:46:33,539 | INFO     | sizes: {0: 2456331, 11: 2456477, 22: 2456505, 32: 2456533, 43: 2456561, 53: 2456589, 64: 2456745, 75: 2456801, 85: 2456829, 90: 2456917, 96: 2456945, 695: 2476878,
[2023-07-21 02:46:55] 2023-07-21 01:46:33,539 | INFO     | --------------------------------------------------
[2023-07-21 02:46:55] 2023-07-21 01:46:33,539 | INFO     | 
[2023-07-21 02:46:55] 2023-07-21 01:46:33,539 | INFO     | executing command: ls -lF /home/m/BOINC/slots/1
[2023-07-21 02:46:55] 2023-07-21 01:46:33,553 | INFO     | queue jobs had 0 job(s) [purged]
[2023-07-21 02:46:55] 2023-07-21 01:46:33,554 | INFO     | queue payloads had 0 job(s) [purged]
[2023-07-21 02:46:55] 2023-07-21 01:46:33,554 | INFO     | queue data_in had 0 job(s) [purged]
[2023-07-21 02:46:55] 2023-07-21 01:46:33,554 | INFO     | queue data_out had 0 job(s) [purged]
[2023-07-21 02:46:55] 2023-07-21 01:46:33,554 | INFO     | queue current_data_in had 0 job(s) [purged]
[2023-07-21 02:46:55] 2023-07-21 01:46:33,554 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2023-07-21 02:46:55] 2023-07-21 01:46:33,554 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2023-07-21 02:46:55] 2023-07-21 01:46:33,554 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2023-07-21 02:46:55] 2023-07-21 01:46:33,554 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2023-07-21 02:46:55] 2023-07-21 01:46:33,554 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2023-07-21 02:46:55] 2023-07-21 01:46:33,554 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2023-07-21 02:46:55] 2023-07-21 01:46:33,554 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2023-07-21 02:46:55] 2023-07-21 01:46:33,554 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2023-07-21 02:46:55] 2023-07-21 01:46:33,554 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2023-07-21 02:46:55] 2023-07-21 01:46:33,554 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2023-07-21 02:46:55] 2023-07-21 01:46:33,555 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2023-07-21 02:46:55] 2023-07-21 01:46:33,555 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2023-07-21 02:46:55] 2023-07-21 01:46:33,555 | INFO     | queue completed_jobids has 1 job(s)
[2023-07-21 02:46:55] 2023-07-21 01:46:33,555 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2023-07-21 02:46:55] 2023-07-21 01:46:33,555 | INFO     | queue messages had 0 job(s) [purged]
[2023-07-21 02:46:55] 2023-07-21 01:46:33,555 | INFO     | job 5909349183 has completed (purged errors)
[2023-07-21 02:46:55] 2023-07-21 01:46:33,555 | INFO     | overall cleanup function is called
[2023-07-21 02:46:55] 2023-07-21 01:46:34,561 | INFO     | --- collectZombieJob: --- 10, [30584]
[2023-07-21 02:46:55] 2023-07-21 01:46:34,561 | INFO     | zombie collector trying to kill pid 30584
[2023-07-21 02:46:55] 2023-07-21 01:46:34,562 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2023-07-21 02:46:55] 2023-07-21 01:46:35,567 | INFO     | collected zombie processes
[2023-07-21 02:46:55] 2023-07-21 01:46:35,567 | INFO     | will now attempt to kill all subprocesses of pid=30584
[2023-07-21 02:46:55] 2023-07-21 01:46:35,604 | INFO     | process IDs to be killed: [30584] (in reverse order)
[2023-07-21 02:46:55] 2023-07-21 01:46:35,639 | WARNING  | found no corresponding commands to process id(s)
[2023-07-21 02:46:55] 2023-07-21 01:46:35,639 | INFO     | Do not look for orphan processes in BOINC jobs
[2023-07-21 02:46:55] 2023-07-21 01:46:35,640 | INFO     | ready for new job
[2023-07-21 02:46:55] 2023-07-21 01:46:35,640 | INFO     | pilot has finished with previous job - re-establishing logging
[2023-07-21 02:46:55] 2023-07-21 01:46:35,640 | INFO     | *************************************
[2023-07-21 02:46:55] 2023-07-21 01:46:35,640 | INFO     | ***  PanDA Pilot version 3.6.4.7  ***
[2023-07-21 02:46:55] 2023-07-21 01:46:35,640 | INFO     | *************************************
[2023-07-21 02:46:55] 2023-07-21 01:46:35,641 | INFO     | 
[2023-07-21 02:46:55] 2023-07-21 01:46:35,657 | INFO     | architecture information:
[2023-07-21 02:46:55] 2023-07-21 01:46:35,658 | INFO     | executing command: cat /etc/os-release
[2023-07-21 02:46:55] 2023-07-21 01:46:35,669 | INFO     | cat /etc/os-release:
[2023-07-21 02:46:55] NAME="CentOS Linux"
[2023-07-21 02:46:55] VERSION="7 (Core)"
[2023-07-21 02:46:55] ID="centos"
[2023-07-21 02:46:55] ID_LIKE="rhel fedora"
[2023-07-21 02:46:55] VERSION_ID="7"
[2023-07-21 02:46:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2023-07-21 02:46:55] ANSI_COLOR="0;31"
[2023-07-21 02:46:55] CPE_NAME="cpe:/o:centos:centos:7"
[2023-07-21 02:46:55] HOME_URL="https://www.centos.org/"
[2023-07-21 02:46:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2023-07-21 02:46:55] 
[2023-07-21 02:46:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2023-07-21 02:46:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2023-07-21 02:46:55] REDHAT_SUPPORT_PRODUCT="centos"
[2023-07-21 02:46:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2023-07-21 02:46:55] 
[2023-07-21 02:46:55] 2023-07-21 01:46:35,669 | INFO     | *************************************
[2023-07-21 02:46:55] 2023-07-21 01:46:36,172 | INFO     | executing command: df -mP /home/m/BOINC/slots/1
[2023-07-21 02:46:55] 2023-07-21 01:46:36,184 | INFO     | sufficient remaining disk space (423724318720 B)
[2023-07-21 02:46:55] 2023-07-21 01:46:36,185 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2023-07-21 02:46:55] 2023-07-21 01:46:36,185 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2023-07-21 02:46:55] 2023-07-21 01:46:36,185 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2023-07-21 02:46:55] 2023-07-21 01:46:36,185 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2023-07-21 02:46:55] 2023-07-21 01:46:36,185 | INFO     | found 0 job(s) in 20 queues
[2023-07-21 02:46:55] 2023-07-21 01:46:36,185 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2023-07-21 02:46:55] 2023-07-21 01:46:36,185 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2023-07-21 02:46:55] 2023-07-21 01:46:36,586 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2023-07-21 02:46:55] 2023-07-21 01:46:36,586 | INFO     | aborting loop
[2023-07-21 02:46:55] 2023-07-21 01:46:37,190 | INFO     | [job] retrieve thread has finished
[2023-07-21 02:46:55] 2023-07-21 01:46:37,278 | INFO     | [job] control thread has finished
[2023-07-21 02:46:55] 2023-07-21 01:46:37,378 | INFO     | [data] control thread has finished
[2023-07-21 02:46:55] 2023-07-21 01:46:37,591 | INFO     | [payload] failed_post thread has finished
[2023-07-21 02:46:55] 2023-07-21 01:46:37,591 | INFO     | [job] job monitor thread has finished
[2023-07-21 02:46:55] 2023-07-21 01:46:37,659 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2023-07-21 02:46:55] 2023-07-21 01:46:37,694 | INFO     | [job] validate thread has finished
[2023-07-21 02:46:55] 2023-07-21 01:46:37,779 | INFO     | [data] copytool_in thread has finished
[2023-07-21 02:46:55] 2023-07-21 01:46:37,879 | INFO     | [job] create_data_payload thread has finished
[2023-07-21 02:46:55] 2023-07-21 01:46:38,032 | INFO     | [payload] execute_payloads thread has finished
[2023-07-21 02:46:55] 2023-07-21 01:46:38,109 | INFO     | [payload] validate_pre thread has finished
[2023-07-21 02:46:55] 2023-07-21 01:46:38,444 | INFO     | [payload] control thread has finished
[2023-07-21 02:46:55] 2023-07-21 01:46:38,548 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2023-07-21 02:46:55] 2023-07-21 01:46:38,573 | INFO     | [payload] validate_post thread has finished
[2023-07-21 02:46:55] 2023-07-21 01:46:39,553 | INFO     | [job] queue monitor thread has finished
[2023-07-21 02:46:55] 2023-07-21 01:46:39,664 | INFO     | [data] copytool_out thread has finished
[2023-07-21 02:46:55] 2023-07-21 01:46:40,191 | INFO     | [data] queue_monitor thread has finished
[2023-07-21 02:46:55] 2023-07-21 01:46:47,153 | INFO     | job.realtimelogging is not enabled
[2023-07-21 02:46:55] 2023-07-21 01:46:48,159 | INFO     | [payload] run_realtimelog thread has finished
[2023-07-21 02:46:55] 2023-07-21 01:46:49,945 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140402235639616)>', '<ExcThread(monitor, started 140401667204864)>']
[2023-07-21 02:46:55] 2023-07-21 01:46:50,241 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2023-07-21 02:46:55] 2023-07-21 01:46:50,241 | INFO     | [monitor] control thread has ended
[2023-07-21 02:46:55] 2023-07-21 01:46:54,969 | INFO     | end of generic workflow (traces error code: 0)
[2023-07-21 02:46:55] 2023-07-21 01:46:54,970 | INFO     | traces error code: 0
[2023-07-21 02:46:55] 2023-07-21 01:46:54,970 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2023-07-21 02:46:55] 2023-07-21 01:46:55,033 [wrapper] ==== pilot stdout END ====
[2023-07-21 02:46:55] 2023-07-21 01:46:55,036 [wrapper] ==== wrapper stdout RESUME ====
[2023-07-21 02:46:55] 2023-07-21 01:46:55,039 [wrapper] pilotpid: 23147
[2023-07-21 02:46:55] 2023-07-21 01:46:55,047 [wrapper] Pilot exit status: 0
[2023-07-21 02:46:55] 2023-07-21 01:46:55,058 [wrapper] pandaids: 5909349183
[2023-07-21 02:46:55] 2023-07-21 01:46:55,064 [wrapper] apfmon messages muted
[2023-07-21 02:46:55] 2023-07-21 01:46:55,067 [wrapper] Test setup, not cleaning
[2023-07-21 02:46:55] 2023-07-21 01:46:55,071 [wrapper] ==== wrapper stdout END ====
[2023-07-21 02:46:55] 2023-07-21 01:46:55,074 [wrapper] ==== wrapper stderr END ====
[2023-07-21 02:46:55] 2023-07-21 01:46:55,080 [wrapper] wrapperexiting ec=0, duration=1298
[2023-07-21 02:46:55] 2023-07-21 01:46:55,083 [wrapper] apfmon messages muted
[2023-07-21 02:46:55]  *** Error codes and diagnostics ***
[2023-07-21 02:46:55]     "exeErrorCode": 0,
[2023-07-21 02:46:55]     "exeErrorDiag": "",
[2023-07-21 02:46:55]     "pilotErrorCode": 0,
[2023-07-21 02:46:55]     "pilotErrorDiag": "",
[2023-07-21 02:46:55]  *** Listing of results directory ***
[2023-07-21 02:46:55] total 43364
[2023-07-21 02:46:55] -rw-r--r-- 1 m m   418016 Jul 21 01:30 pilot3.tar.gz
[2023-07-21 02:46:55] -rwx------ 1 m m    27277 Jul 21 02:17 runpilot2-wrapper.sh
[2023-07-21 02:46:55] -rw-r--r-- 1 m m     4388 Jul 21 02:17 queuedata.json
[2023-07-21 02:46:55] -rw-rw-r-- 1 m m      107 Jul 21 02:25 wrapper_26015_x86_64-pc-linux-gnu
[2023-07-21 02:46:55] -rwxr-xr-x 1 m m     7986 Jul 21 02:25 run_atlas
[2023-07-21 02:46:55] -rw-rw-r-- 1 m m      112 Jul 21 02:25 job.xml
[2023-07-21 02:46:55] -rw-rw-r-- 1 m m     5728 Jul 21 02:25 init_data.xml
[2023-07-21 02:46:55] -rw-r--r-- 2 m m 37224345 Jul 21 02:25 EVNT.04972714._000026.pool.root.1
[2023-07-21 02:46:55] -rw-r--r-- 2 m m    17604 Jul 21 02:25 start_atlas.sh
[2023-07-21 02:46:55] drwxrwx--x 2 m m     4096 Jul 21 02:25 shared
[2023-07-21 02:46:55] -rw-r--r-- 2 m m   428865 Jul 21 02:25 input.tar.gz
[2023-07-21 02:46:55] -rw-rw-r-- 1 m m        0 Jul 21 02:25 boinc_lockfile
[2023-07-21 02:46:55] -rw-rw-r-- 1 m m     2758 Jul 21 02:25 pandaJob.out
[2023-07-21 02:46:55] -rw------- 1 m m      424 Jul 21 02:25 setup.sh.local
[2023-07-21 02:46:55] -rw------- 1 m m  1015601 Jul 21 02:25 agis_schedconf.cvmfs.json
[2023-07-21 02:46:55] -rw------- 1 m m  1370854 Jul 21 02:26 cric_ddmendpoints.json
[2023-07-21 02:46:55] drwx------ 4 m m     4096 Jul 21 02:27 pilot3
[2023-07-21 02:46:55] -rw------- 1 m m  1520105 Jul 21 02:40 output.1.6ba69798-7a67-4c99-a309-4dff36901a7d_70778.pool.root
[2023-07-21 02:46:55] -rw------- 1 m m     1014 Jul 21 02:40 memory_monitor_summary.json
[2023-07-21 02:46:55] -rw-rw-r-- 1 m m      532 Jul 21 02:40 boinc_task_state.xml
[2023-07-21 02:46:55] -rw------- 1 m m   160049 Jul 21 02:43 6ba69798-7a67-4c99-a309-4dff36901a7d_70778.1.job.log.tgz
[2023-07-21 02:46:55] -rw------- 1 m m     6648 Jul 21 02:46 heartbeat.json
[2023-07-21 02:46:55] -rw-rw-r-- 1 m m       25 Jul 21 02:46 wrapper_checkpoint.txt
[2023-07-21 02:46:55] -rw-rw-r-- 1 m m     8192 Jul 21 02:46 boinc_mmap_file
[2023-07-21 02:46:55] -rw------- 1 m m     4092 Jul 21 02:46 pilotlog.txt
[2023-07-21 02:46:55] -rw------- 1 m m   183236 Jul 21 02:46 6ba69798-7a67-4c99-a309-4dff36901a7d_70778.1.job.log
[2023-07-21 02:46:55] -rw------- 1 m m      464 Jul 21 02:46 output.list
[2023-07-21 02:46:55] -rw-rw-r-- 1 m m      748 Jul 21 02:46 runtime_log
[2023-07-21 02:46:55] -rw------- 1 m m  1884160 Jul 21 02:46 result.tar.gz
[2023-07-21 02:46:55] -rw-rw-r-- 1 m m    11905 Jul 21 02:46 runtime_log.err
[2023-07-21 02:46:55] -rw------- 1 m m      627 Jul 21 02:46 Bk9MDmGxtg3n7Olcko1bjSoqABFKDmABFKDm7AsVDmIhNKDmz4GCVo.diag
[2023-07-21 02:46:55] -rw-rw-r-- 1 m m    22720 Jul 21 02:46 stderr.txt
[2023-07-21 02:46:55] HITS file was successfully produced:
[2023-07-21 02:46:55] -rw------- 1 m m 1520105 Jul 21 02:40 shared/HITS.pool.root.1
[2023-07-21 02:46:55]  *** Contents of shared directory: ***
[2023-07-21 02:46:55] total 40120
[2023-07-21 02:46:55] -rw-r--r-- 2 m m 37224345 Jul 21 02:25 ATLAS.root_0
[2023-07-21 02:46:55] -rw-r--r-- 2 m m    17604 Jul 21 02:25 start_atlas.sh
[2023-07-21 02:46:55] -rw-r--r-- 2 m m   428865 Jul 21 02:25 input.tar.gz
[2023-07-21 02:46:55] -rw------- 1 m m  1520105 Jul 21 02:40 HITS.pool.root.1
[2023-07-21 02:46:55] -rw------- 1 m m  1884160 Jul 21 02:46 result.tar.gz
02:46:56 (19994): run_atlas exited; CPU time 530.232092
02:46:56 (19994): called boinc_finish(0)

</stderr_txt>
]]>


©2024 CERN