Name jwwMDmVbGh3n7Olcko1bjSoqABFKDmABFKDm7AsVDmelNKDmlN5nfm_0
Workunit 2319884
Created 22 Jul 2023, 1:28:55 UTC
Sent 22 Jul 2023, 1:43:29 UTC
Report deadline 29 Jul 2023, 1:43:29 UTC
Received 22 Jul 2023, 2:09:55 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 1498
Run time 24 min 3 sec
CPU time 11 min 41 sec
Validate state Valid
Credit 16.12
Device peak FLOPS 13.02 GFLOPS
Application version ATLAS Simulation v3.01 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 1.51 GB
Peak swap size 2.12 GB
Peak disk usage 80.77 MB

Stderr output

<core_client_version>7.4.25</core_client_version>
<![CDATA[
<stderr_txt>
02:44:39 (23995): wrapper (7.7.26015): starting
02:44:39 (23995): wrapper: running run_atlas (--nthreads 4)
[2023-07-22 02:44:39] Arguments: --nthreads 4
[2023-07-22 02:44:39] Threads: 4
[2023-07-22 02:44:39] Checking for CVMFS
[2023-07-22 02:44:39] Probing /cvmfs/atlas.cern.ch... OK
[2023-07-22 02:44:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2023-07-22 02:44:39] Running cvmfs_config stat atlas.cern.ch
[2023-07-22 02:44:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2023-07-22 02:44:40] 2.9.0.0 5941 57 43208 121568 2 65 3608148 4194305 0 130560 0 195581 99.969 26422 476 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.100.152:3128 1
[2023-07-22 02:44:40] CVMFS is ok
[2023-07-22 02:44:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2023-07-22 02:44:40] Checking for apptainer binary...
[2023-07-22 02:44:40] Using apptainer found in PATH at /usr/bin/apptainer
[2023-07-22 02:44:40] Running /usr/bin/apptainer --version
[2023-07-22 02:44:40] apptainer version 1.0.3
[2023-07-22 02:44:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2023-07-22 02:44:40] TeeC16
[2023-07-22 02:44:40] apptainer works
[2023-07-22 02:44:40] Set ATHENA_PROC_NUMBER=4
[2023-07-22 02:44:40] Set ATHENA_CORE_NUMBER=4
[2023-07-22 02:44:40] Starting ATLAS job with PandaID=5910368601
[2023-07-22 02:44:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/m/BOINC/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2023-07-22 03:08:40]  *** The last 200 lines of the pilot log: ***
[2023-07-22 03:08:40] 2023-07-22 02:07:45,593 | INFO     | output file size check: skipping output file /home/m/BOINC/slots/1/PanDA_Pilot-5910368601/output.1.0ae453d1-feed-4915-8786-3d54ec80c345_86121.pool.root since it do
[2023-07-22 03:08:40] 2023-07-22 02:07:45,638 | INFO     | number of running child processes to parent process 2372: 1
[2023-07-22 03:08:40] 2023-07-22 02:07:45,638 | INFO     | maximum number of monitored processes: 5
[2023-07-22 03:08:40] 2023-07-22 02:07:48,141 | INFO     | monitor loop #207: job 0:5910368601 is in state 'stageout'
[2023-07-22 03:08:40] 2023-07-22 02:07:48,187 | INFO     | number of running child processes to parent process 2372: 1
[2023-07-22 03:08:40] 2023-07-22 02:07:48,187 | INFO     | maximum number of monitored processes: 5
[2023-07-22 03:08:40] 2023-07-22 02:07:50,690 | INFO     | monitor loop #208: job 0:5910368601 is in state 'stageout'
[2023-07-22 03:08:40] 2023-07-22 02:07:50,736 | INFO     | number of running child processes to parent process 2372: 1
[2023-07-22 03:08:40] 2023-07-22 02:07:50,736 | INFO     | maximum number of monitored processes: 5
[2023-07-22 03:08:40] 2023-07-22 02:07:53,239 | INFO     | monitor loop #209: job 0:5910368601 is in state 'stageout'
[2023-07-22 03:08:40] 2023-07-22 02:07:53,274 | INFO     | number of running child processes to parent process 2372: 1
[2023-07-22 03:08:40] 2023-07-22 02:07:53,275 | INFO     | maximum number of monitored processes: 5
[2023-07-22 03:08:40] 2023-07-22 02:07:55,778 | INFO     | monitor loop #210: job 0:5910368601 is in state 'stageout'
[2023-07-22 03:08:40] 2023-07-22 02:07:55,812 | INFO     | number of running child processes to parent process 2372: 1
[2023-07-22 03:08:40] 2023-07-22 02:07:55,813 | INFO     | maximum number of monitored processes: 5
[2023-07-22 03:08:40] 2023-07-22 02:07:58,316 | INFO     | monitor loop #211: job 0:5910368601 is in state 'stageout'
[2023-07-22 03:08:40] 2023-07-22 02:07:58,362 | INFO     | number of running child processes to parent process 2372: 1
[2023-07-22 03:08:40] 2023-07-22 02:07:58,362 | INFO     | maximum number of monitored processes: 5
[2023-07-22 03:08:40] 2023-07-22 02:08:00,865 | INFO     | monitor loop #212: job 0:5910368601 is in state 'stageout'
[2023-07-22 03:08:40] 2023-07-22 02:08:00,899 | INFO     | number of running child processes to parent process 2372: 1
[2023-07-22 03:08:40] 2023-07-22 02:08:00,900 | INFO     | maximum number of monitored processes: 5
[2023-07-22 03:08:40] 2023-07-22 02:08:03,403 | INFO     | monitor loop #213: job 0:5910368601 is in state 'stageout'
[2023-07-22 03:08:40] 2023-07-22 02:08:03,449 | INFO     | number of running child processes to parent process 2372: 1
[2023-07-22 03:08:40] 2023-07-22 02:08:03,450 | INFO     | maximum number of monitored processes: 5
[2023-07-22 03:08:40] 2023-07-22 02:08:05,953 | INFO     | monitor loop #214: job 0:5910368601 is in state 'stageout'
[2023-07-22 03:08:40] 2023-07-22 02:08:05,991 | INFO     | number of running child processes to parent process 2372: 1
[2023-07-22 03:08:40] 2023-07-22 02:08:05,991 | INFO     | maximum number of monitored processes: 5
[2023-07-22 03:08:40] 2023-07-22 02:08:08,494 | INFO     | monitor loop #215: job 0:5910368601 is in state 'stageout'
[2023-07-22 03:08:40] 2023-07-22 02:08:08,531 | INFO     | number of running child processes to parent process 2372: 1
[2023-07-22 03:08:40] 2023-07-22 02:08:08,531 | INFO     | maximum number of monitored processes: 5
[2023-07-22 03:08:40] 2023-07-22 02:08:09,738 | INFO     | [attempt=3/3] loading data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json
[2023-07-22 03:08:40] 2023-07-22 02:08:09,897 | WARNING  | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: 
[2023-07-22 03:08:40] 2023-07-22 02:08:09,897 | WARNING  | cache file=/home/m/BOINC/slots/1/agis_ddmendpoints.agis.ALL.json is not available: [Errno 2] No such file or directory: '/home/m/BOINC/slots/1/agis_ddmendpoints.ag
[2023-07-22 03:08:40] 2023-07-22 02:08:09,960 | INFO     | transferring file 0ae453d1-feed-4915-8786-3d54ec80c345_86121.1.job.log.tgz from /home/m/BOINC/slots/1/PanDA_Pilot-5910368601/0ae453d1-feed-4915-8786-3d54ec80c345_8
[2023-07-22 03:08:40] 2023-07-22 02:08:09,960 | INFO     | executing command: /usr/bin/env mv /home/m/BOINC/slots/1/PanDA_Pilot-5910368601/0ae453d1-feed-4915-8786-3d54ec80c345_86121.1.job.log.tgz /home/m/BOINC/slots/1/0ae4
[2023-07-22 03:08:40] 2023-07-22 02:08:09,975 | INFO     | Adding to output.list: 0ae453d1-feed-4915-8786-3d54ec80c345_86121.1.job.log.tgz davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/ca/07/0ae453d1-feed-
[2023-07-22 03:08:40] 2023-07-22 02:08:09,976 | INFO     | summary of transferred files:
[2023-07-22 03:08:40] 2023-07-22 02:08:09,976 | INFO     |  -- lfn=0ae453d1-feed-4915-8786-3d54ec80c345_86121.1.job.log.tgz, status_code=0, status=transferred
[2023-07-22 03:08:40] 2023-07-22 02:08:09,976 | INFO     | stage-out finished correctly
[2023-07-22 03:08:40] 2023-07-22 02:08:10,034 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2023-07-22 03:08:40] 2023-07-22 02:08:11,034 | INFO     | monitor loop #216: job 0:5910368601 is in state 'finished'
[2023-07-22 03:08:40] 2023-07-22 02:08:11,034 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-07-22 03:08:40] 2023-07-22 02:08:11,496 | INFO     | job 5910368601 has state=finished
[2023-07-22 03:08:40] 2023-07-22 02:08:11,496 | INFO     | preparing for final server update for job 5910368601 in state='finished'
[2023-07-22 03:08:40] 2023-07-22 02:08:11,497 | INFO     | this job has now completed (state=finished)
[2023-07-22 03:08:40] 2023-07-22 02:08:11,497 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2023-07-22 03:08:40] 2023-07-22 02:08:11,497 | INFO     | job 5910368601 has finished - writing final server update
[2023-07-22 03:08:40] 2023-07-22 02:08:11,498 | WARNING  | wrong length of table data, x=[1689990775.0, 1689990836.0, 1689990897.0, 1689990958.0, 1689991019.0, 1689991080.0, 1689991141.0], y=[1641823.0, 1645202.0, 1655562.
[2023-07-22 03:08:40] 2023-07-22 02:08:11,499 | INFO     | total number of processed events: 2 (read)
[2023-07-22 03:08:40] 2023-07-22 02:08:11,517 | INFO     | executing command: lscpu
[2023-07-22 03:08:40] 2023-07-22 02:08:11,534 | INFO     | found 2 cores (2 cores per socket, 1 sockets)
[2023-07-22 03:08:40] 2023-07-22 02:08:11,534 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2023-07-22 03:08:40] 2023-07-22 02:08:11,557 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2023-07-22 03:08:40] 2023-07-22 02:08:13,537 | INFO     | monitor loop #217: job 0:5910368601 is in state 'finished'
[2023-07-22 03:08:40] 2023-07-22 02:08:13,538 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-07-22 03:08:40] 2023-07-22 02:08:16,040 | INFO     | monitor loop #218: job 0:5910368601 is in state 'finished'
[2023-07-22 03:08:40] 2023-07-22 02:08:16,040 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-07-22 03:08:40] 2023-07-22 02:08:18,543 | INFO     | monitor loop #219: job 0:5910368601 is in state 'finished'
[2023-07-22 03:08:40] 2023-07-22 02:08:18,543 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-07-22 03:08:40] 2023-07-22 02:08:21,046 | INFO     | monitor loop #220: job 0:5910368601 is in state 'finished'
[2023-07-22 03:08:40] 2023-07-22 02:08:21,047 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-07-22 03:08:40] 2023-07-22 02:08:21,249 | INFO     | CPU arch script returned: x86-64-v2
[2023-07-22 03:08:40] 2023-07-22 02:08:21,249 | INFO     | using path: /home/m/BOINC/slots/1/PanDA_Pilot-5910368601/memory_monitor_summary.json (trf name=prmon)
[2023-07-22 03:08:40] 2023-07-22 02:08:21,251 | INFO     | extracted standard info from prmon json
[2023-07-22 03:08:40] 2023-07-22 02:08:21,251 | INFO     | extracted standard memory fields from prmon json
[2023-07-22 03:08:40] 2023-07-22 02:08:21,251 | INFO     | ..............................
[2023-07-22 03:08:40] 2023-07-22 02:08:21,251 | INFO     | . Timing measurements:
[2023-07-22 03:08:40] 2023-07-22 02:08:21,251 | INFO     | . get job = 44 s
[2023-07-22 03:08:40] 2023-07-22 02:08:21,251 | INFO     | . initial setup = 69 s
[2023-07-22 03:08:40] 2023-07-22 02:08:21,251 | INFO     | . payload setup = 6 s
[2023-07-22 03:08:40] 2023-07-22 02:08:21,251 | INFO     | . stage-in = 45 s
[2023-07-22 03:08:40] 2023-07-22 02:08:21,252 | INFO     | . payload execution = 855 s
[2023-07-22 03:08:40] 2023-07-22 02:08:21,252 | INFO     | . stage-out = 368 s
[2023-07-22 03:08:40] 2023-07-22 02:08:21,252 | INFO     | ..............................
[2023-07-22 03:08:40] 2023-07-22 02:08:21,349 | INFO     | 
[2023-07-22 03:08:40] 2023-07-22 02:08:21,349 | INFO     | job summary report
[2023-07-22 03:08:40] 2023-07-22 02:08:21,349 | INFO     | --------------------------------------------------
[2023-07-22 03:08:40] 2023-07-22 02:08:21,349 | INFO     | PanDA job id: 5910368601
[2023-07-22 03:08:40] 2023-07-22 02:08:21,349 | INFO     | task id: NULL
[2023-07-22 03:08:40] 2023-07-22 02:08:21,349 | INFO     | errors: (none)
[2023-07-22 03:08:40] 2023-07-22 02:08:21,349 | INFO     | status: LOG_TRANSFER = DONE 
[2023-07-22 03:08:40] 2023-07-22 02:08:21,349 | INFO     | pilot state: finished 
[2023-07-22 03:08:40] 2023-07-22 02:08:21,350 | INFO     | transexitcode: 0
[2023-07-22 03:08:40] 2023-07-22 02:08:21,350 | INFO     | exeerrorcode: 0
[2023-07-22 03:08:40] 2023-07-22 02:08:21,350 | INFO     | exeerrordiag: 
[2023-07-22 03:08:40] 2023-07-22 02:08:21,350 | INFO     | exitcode: 0
[2023-07-22 03:08:40] 2023-07-22 02:08:21,350 | INFO     | exitmsg: OK
[2023-07-22 03:08:40] 2023-07-22 02:08:21,350 | INFO     | cpuconsumptiontime: 716 s
[2023-07-22 03:08:40] 2023-07-22 02:08:21,350 | INFO     | nevents: 2
[2023-07-22 03:08:40] 2023-07-22 02:08:21,350 | INFO     | neventsw: 0
[2023-07-22 03:08:40] 2023-07-22 02:08:21,350 | INFO     | pid: 2372
[2023-07-22 03:08:40] 2023-07-22 02:08:21,351 | INFO     | pgrp: 2372
[2023-07-22 03:08:40] 2023-07-22 02:08:21,351 | INFO     | corecount: 4
[2023-07-22 03:08:40] 2023-07-22 02:08:21,351 | INFO     | event service: False
[2023-07-22 03:08:40] 2023-07-22 02:08:21,351 | INFO     | sizes: {0: 2456152, 1: 2456351, 11: 2456497, 22: 2456525, 33: 2456553, 43: 2456581, 50: 2456797, 54: 2456825, 866: 2477823, 1234: 2487187, 1245: 2487353}
[2023-07-22 03:08:40] 2023-07-22 02:08:21,351 | INFO     | --------------------------------------------------
[2023-07-22 03:08:40] 2023-07-22 02:08:21,351 | INFO     | 
[2023-07-22 03:08:40] 2023-07-22 02:08:21,351 | INFO     | executing command: ls -lF /home/m/BOINC/slots/1
[2023-07-22 03:08:40] 2023-07-22 02:08:21,368 | INFO     | queue jobs had 0 job(s) [purged]
[2023-07-22 03:08:40] 2023-07-22 02:08:21,368 | INFO     | queue payloads had 0 job(s) [purged]
[2023-07-22 03:08:40] 2023-07-22 02:08:21,368 | INFO     | queue data_in had 0 job(s) [purged]
[2023-07-22 03:08:40] 2023-07-22 02:08:21,368 | INFO     | queue data_out had 0 job(s) [purged]
[2023-07-22 03:08:40] 2023-07-22 02:08:21,368 | INFO     | queue current_data_in had 0 job(s) [purged]
[2023-07-22 03:08:40] 2023-07-22 02:08:21,368 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2023-07-22 03:08:40] 2023-07-22 02:08:21,368 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2023-07-22 03:08:40] 2023-07-22 02:08:21,368 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2023-07-22 03:08:40] 2023-07-22 02:08:21,368 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2023-07-22 03:08:40] 2023-07-22 02:08:21,368 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2023-07-22 03:08:40] 2023-07-22 02:08:21,369 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2023-07-22 03:08:40] 2023-07-22 02:08:21,369 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2023-07-22 03:08:40] 2023-07-22 02:08:21,369 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2023-07-22 03:08:40] 2023-07-22 02:08:21,369 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2023-07-22 03:08:40] 2023-07-22 02:08:21,369 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2023-07-22 03:08:40] 2023-07-22 02:08:21,369 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2023-07-22 03:08:40] 2023-07-22 02:08:21,369 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2023-07-22 03:08:40] 2023-07-22 02:08:21,369 | INFO     | queue completed_jobids has 1 job(s)
[2023-07-22 03:08:40] 2023-07-22 02:08:21,369 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2023-07-22 03:08:40] 2023-07-22 02:08:21,369 | INFO     | queue messages had 0 job(s) [purged]
[2023-07-22 03:08:40] 2023-07-22 02:08:21,369 | INFO     | job 5910368601 has completed (purged errors)
[2023-07-22 03:08:40] 2023-07-22 02:08:21,369 | INFO     | overall cleanup function is called
[2023-07-22 03:08:40] 2023-07-22 02:08:22,376 | INFO     | --- collectZombieJob: --- 10, [2372]
[2023-07-22 03:08:40] 2023-07-22 02:08:22,376 | INFO     | zombie collector trying to kill pid 2372
[2023-07-22 03:08:40] 2023-07-22 02:08:22,376 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2023-07-22 03:08:40] 2023-07-22 02:08:23,381 | INFO     | collected zombie processes
[2023-07-22 03:08:40] 2023-07-22 02:08:23,382 | INFO     | will now attempt to kill all subprocesses of pid=2372
[2023-07-22 03:08:40] 2023-07-22 02:08:23,430 | INFO     | process IDs to be killed: [2372] (in reverse order)
[2023-07-22 03:08:40] 2023-07-22 02:08:23,460 | WARNING  | found no corresponding commands to process id(s)
[2023-07-22 03:08:40] 2023-07-22 02:08:23,461 | INFO     | Do not look for orphan processes in BOINC jobs
[2023-07-22 03:08:40] 2023-07-22 02:08:23,461 | INFO     | ready for new job
[2023-07-22 03:08:40] 2023-07-22 02:08:23,461 | INFO     | pilot has finished with previous job - re-establishing logging
[2023-07-22 03:08:40] 2023-07-22 02:08:23,462 | INFO     | *************************************
[2023-07-22 03:08:40] 2023-07-22 02:08:23,462 | INFO     | ***  PanDA Pilot version 3.6.4.7  ***
[2023-07-22 03:08:40] 2023-07-22 02:08:23,462 | INFO     | *************************************
[2023-07-22 03:08:40] 2023-07-22 02:08:23,462 | INFO     | 
[2023-07-22 03:08:40] 2023-07-22 02:08:23,480 | INFO     | architecture information:
[2023-07-22 03:08:40] 2023-07-22 02:08:23,480 | INFO     | executing command: cat /etc/os-release
[2023-07-22 03:08:40] 2023-07-22 02:08:23,492 | INFO     | cat /etc/os-release:
[2023-07-22 03:08:40] NAME="CentOS Linux"
[2023-07-22 03:08:40] VERSION="7 (Core)"
[2023-07-22 03:08:40] ID="centos"
[2023-07-22 03:08:40] ID_LIKE="rhel fedora"
[2023-07-22 03:08:40] VERSION_ID="7"
[2023-07-22 03:08:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2023-07-22 03:08:40] ANSI_COLOR="0;31"
[2023-07-22 03:08:40] CPE_NAME="cpe:/o:centos:centos:7"
[2023-07-22 03:08:40] HOME_URL="https://www.centos.org/"
[2023-07-22 03:08:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2023-07-22 03:08:40] 
[2023-07-22 03:08:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2023-07-22 03:08:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2023-07-22 03:08:40] REDHAT_SUPPORT_PRODUCT="centos"
[2023-07-22 03:08:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2023-07-22 03:08:40] 
[2023-07-22 03:08:40] 2023-07-22 02:08:23,492 | INFO     | *************************************
[2023-07-22 03:08:40] 2023-07-22 02:08:23,995 | INFO     | executing command: df -mP /home/m/BOINC/slots/1
[2023-07-22 03:08:40] 2023-07-22 02:08:24,008 | INFO     | sufficient remaining disk space (423383531520 B)
[2023-07-22 03:08:40] 2023-07-22 02:08:24,008 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2023-07-22 03:08:40] 2023-07-22 02:08:24,008 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2023-07-22 03:08:40] 2023-07-22 02:08:24,008 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2023-07-22 03:08:40] 2023-07-22 02:08:24,555 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2023-07-22 03:08:40] 2023-07-22 02:08:24,555 | INFO     | aborting loop
[2023-07-22 03:08:40] 2023-07-22 02:08:24,874 | INFO     | found 0 job(s) in 20 queues
[2023-07-22 03:08:40] 2023-07-22 02:08:24,875 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2023-07-22 03:08:40] 2023-07-22 02:08:24,875 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2023-07-22 03:08:40] 2023-07-22 02:08:25,012 | INFO     | [job] retrieve thread has finished
[2023-07-22 03:08:40] 2023-07-22 02:08:25,020 | INFO     | [payload] validate_pre thread has finished
[2023-07-22 03:08:40] 2023-07-22 02:08:25,108 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2023-07-22 03:08:40] 2023-07-22 02:08:25,146 | INFO     | [job] control thread has finished
[2023-07-22 03:08:40] 2023-07-22 02:08:25,560 | INFO     | [job] job monitor thread has finished
[2023-07-22 03:08:40] 2023-07-22 02:08:25,640 | INFO     | [data] control thread has finished
[2023-07-22 03:08:40] 2023-07-22 02:08:25,642 | INFO     | [payload] control thread has finished
[2023-07-22 03:08:40] 2023-07-22 02:08:25,986 | INFO     | [payload] execute_payloads thread has finished
[2023-07-22 03:08:40] 2023-07-22 02:08:26,014 | INFO     | [data] copytool_out thread has finished
[2023-07-22 03:08:40] 2023-07-22 02:08:26,034 | INFO     | [payload] validate_post thread has finished
[2023-07-22 03:08:40] 2023-07-22 02:08:26,205 | INFO     | [job] validate thread has finished
[2023-07-22 03:08:40] 2023-07-22 02:08:26,212 | INFO     | [payload] failed_post thread has finished
[2023-07-22 03:08:40] 2023-07-22 02:08:26,299 | INFO     | [data] copytool_in thread has finished
[2023-07-22 03:08:40] 2023-07-22 02:08:26,354 | INFO     | [job] create_data_payload thread has finished
[2023-07-22 03:08:40] 2023-07-22 02:08:26,357 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2023-07-22 03:08:40] 2023-07-22 02:08:27,363 | INFO     | [job] queue monitor thread has finished
[2023-07-22 03:08:40] 2023-07-22 02:08:29,113 | INFO     | [data] queue_monitor thread has finished
[2023-07-22 03:08:40] 2023-07-22 02:08:34,153 | INFO     | job.realtimelogging is not enabled
[2023-07-22 03:08:40] 2023-07-22 02:08:35,154 | INFO     | [payload] run_realtimelog thread has finished
[2023-07-22 03:08:40] 2023-07-22 02:08:35,181 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140254889768768)>', '<ExcThread(monitor, started 140254455502592)>']
[2023-07-22 03:08:40] 2023-07-22 02:08:35,923 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2023-07-22 03:08:40] 2023-07-22 02:08:35,923 | INFO     | [monitor] control thread has ended
[2023-07-22 03:08:40] 2023-07-22 02:08:40,206 | INFO     | end of generic workflow (traces error code: 0)
[2023-07-22 03:08:40] 2023-07-22 02:08:40,206 | INFO     | traces error code: 0
[2023-07-22 03:08:40] 2023-07-22 02:08:40,207 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2023-07-22 03:08:40] 2023-07-22 02:08:40,266 [wrapper] ==== pilot stdout END ====
[2023-07-22 03:08:40] 2023-07-22 02:08:40,270 [wrapper] ==== wrapper stdout RESUME ====
[2023-07-22 03:08:40] 2023-07-22 02:08:40,273 [wrapper] pilotpid: 27143
[2023-07-22 03:08:40] 2023-07-22 02:08:40,276 [wrapper] Pilot exit status: 0
[2023-07-22 03:08:40] 2023-07-22 02:08:40,287 [wrapper] pandaids: 5910368601
[2023-07-22 03:08:40] 2023-07-22 02:08:40,293 [wrapper] apfmon messages muted
[2023-07-22 03:08:40] 2023-07-22 02:08:40,300 [wrapper] Test setup, not cleaning
[2023-07-22 03:08:40] 2023-07-22 02:08:40,303 [wrapper] ==== wrapper stdout END ====
[2023-07-22 03:08:40] 2023-07-22 02:08:40,307 [wrapper] ==== wrapper stderr END ====
[2023-07-22 03:08:40] 2023-07-22 02:08:40,313 [wrapper] wrapperexiting ec=0, duration=1440
[2023-07-22 03:08:40] 2023-07-22 02:08:40,316 [wrapper] apfmon messages muted
[2023-07-22 03:08:40]  *** Error codes and diagnostics ***
[2023-07-22 03:08:40]     "exeErrorCode": 0,
[2023-07-22 03:08:40]     "exeErrorDiag": "",
[2023-07-22 03:08:40]     "pilotErrorCode": 0,
[2023-07-22 03:08:40]     "pilotErrorDiag": "",
[2023-07-22 03:08:40]  *** Listing of results directory ***
[2023-07-22 03:08:40] total 44448
[2023-07-22 03:08:40] -rw-r--r-- 1 m m   418016 Jul 22 01:34 pilot3.tar.gz
[2023-07-22 03:08:40] -rwx------ 1 m m    27277 Jul 22 02:28 runpilot2-wrapper.sh
[2023-07-22 03:08:40] -rw-r--r-- 1 m m     4388 Jul 22 02:28 queuedata.json
[2023-07-22 03:08:40] -rw-rw-r-- 1 m m      107 Jul 22 02:44 wrapper_26015_x86_64-pc-linux-gnu
[2023-07-22 03:08:40] -rwxr-xr-x 1 m m     7986 Jul 22 02:44 run_atlas
[2023-07-22 03:08:40] -rw-rw-r-- 1 m m      112 Jul 22 02:44 job.xml
[2023-07-22 03:08:40] -rw-r--r-- 2 m m    17604 Jul 22 02:44 start_atlas.sh
[2023-07-22 03:08:40] drwxrwx--x 2 m m     4096 Jul 22 02:44 shared
[2023-07-22 03:08:40] -rw-r--r-- 2 m m   428858 Jul 22 02:44 input.tar.gz
[2023-07-22 03:08:40] -rw-rw-r-- 1 m m     5728 Jul 22 02:44 init_data.xml
[2023-07-22 03:08:40] -rw-r--r-- 2 m m 37620382 Jul 22 02:44 EVNT.04972714._000038.pool.root.1
[2023-07-22 03:08:40] -rw-rw-r-- 1 m m        0 Jul 22 02:44 boinc_lockfile
[2023-07-22 03:08:40] -rw-rw-r-- 1 m m     2752 Jul 22 02:44 pandaJob.out
[2023-07-22 03:08:40] -rw------- 1 m m      424 Jul 22 02:44 setup.sh.local
[2023-07-22 03:08:40] -rw------- 1 m m  1370854 Jul 22 02:45 cric_ddmendpoints.json
[2023-07-22 03:08:40] -rw------- 1 m m  1014892 Jul 22 02:45 agis_schedconf.cvmfs.json
[2023-07-22 03:08:40] drwx------ 4 m m     4096 Jul 22 02:46 pilot3
[2023-07-22 03:08:40] -rw------- 1 m m  1859036 Jul 22 03:01 output.1.0ae453d1-feed-4915-8786-3d54ec80c345_86121.pool.root
[2023-07-22 03:08:40] -rw------- 1 m m     1016 Jul 22 03:01 memory_monitor_summary.json
[2023-07-22 03:08:40] -rw-rw-r-- 1 m m      533 Jul 22 03:02 boinc_task_state.xml
[2023-07-22 03:08:40] -rw------- 1 m m   161939 Jul 22 03:04 0ae453d1-feed-4915-8786-3d54ec80c345_86121.1.job.log.tgz
[2023-07-22 03:08:40] -rw------- 1 m m     7375 Jul 22 03:08 heartbeat.json
[2023-07-22 03:08:40] -rw-rw-r-- 1 m m     8192 Jul 22 03:08 boinc_mmap_file
[2023-07-22 03:08:40] -rw-rw-r-- 1 m m       25 Jul 22 03:08 wrapper_checkpoint.txt
[2023-07-22 03:08:40] -rw------- 1 m m     3969 Jul 22 03:08 pilotlog.txt
[2023-07-22 03:08:40] -rw------- 1 m m   200062 Jul 22 03:08 0ae453d1-feed-4915-8786-3d54ec80c345_86121.1.job.log
[2023-07-22 03:08:40] -rw------- 1 m m      464 Jul 22 03:08 output.list
[2023-07-22 03:08:40] -rw-rw-r-- 1 m m      748 Jul 22 03:08 runtime_log
[2023-07-22 03:08:40] -rw------- 1 m m  2242560 Jul 22 03:08 result.tar.gz
[2023-07-22 03:08:40] -rw------- 1 m m      627 Jul 22 03:08 jwwMDmVbGh3n7Olcko1bjSoqABFKDmABFKDm7AsVDmelNKDmlN5nfm.diag
[2023-07-22 03:08:40] -rw-rw-r-- 1 m m    11905 Jul 22 03:08 runtime_log.err
[2023-07-22 03:08:40] -rw-rw-r-- 1 m m    22693 Jul 22 03:08 stderr.txt
[2023-07-22 03:08:40] HITS file was successfully produced:
[2023-07-22 03:08:40] -rw------- 1 m m 1859036 Jul 22 03:01 shared/HITS.pool.root.1
[2023-07-22 03:08:40]  *** Contents of shared directory: ***
[2023-07-22 03:08:40] total 41188
[2023-07-22 03:08:40] -rw-r--r-- 2 m m    17604 Jul 22 02:44 start_atlas.sh
[2023-07-22 03:08:40] -rw-r--r-- 2 m m   428858 Jul 22 02:44 input.tar.gz
[2023-07-22 03:08:40] -rw-r--r-- 2 m m 37620382 Jul 22 02:44 ATLAS.root_0
[2023-07-22 03:08:40] -rw------- 1 m m  1859036 Jul 22 03:01 HITS.pool.root.1
[2023-07-22 03:08:40] -rw------- 1 m m  2242560 Jul 22 03:08 result.tar.gz
03:08:41 (23995): run_atlas exited; CPU time 701.438447
03:08:41 (23995): called boinc_finish(0)

</stderr_txt>
]]>


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