Name 9O4MDm0Gah3n7Olcko1bjSoqABFKDmABFKDm7AsVDm8oNKDmq8mRMm_1
Workunit 2320088
Created 22 Jul 2023, 23:10:28 UTC
Sent 22 Jul 2023, 23:11:31 UTC
Report deadline 29 Jul 2023, 23:11:31 UTC
Received 23 Jul 2023, 0:01:44 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 4662
Run time 41 min 46 sec
CPU time 16 min 25 sec
Validate state Valid
Credit 28.89
Device peak FLOPS 4.48 GFLOPS
Application version ATLAS Simulation v3.01 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 1.57 GB
Peak swap size 19.84 GB
Peak disk usage 84.17 MB

Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
17:19:41 (6597): wrapper (7.7.26015): starting
17:19:41 (6597): wrapper: running run_atlas (--nthreads 1)
[2023-07-22 17:19:41] Arguments: --nthreads 1
[2023-07-22 17:19:41] Threads: 1
[2023-07-22 17:19:41] Checking for CVMFS
[2023-07-22 17:19:51] Probing /cvmfs/atlas.cern.ch... OK
[2023-07-22 17:19:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2023-07-22 17:19:53] Running cvmfs_config stat atlas.cern.ch
[2023-07-22 17:19:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2023-07-22 17:19:55] 2.10.1.0 6730 0 24640 121601 3 1 3786145 4096000 0 130560 0 0 100.000 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2023-07-22 17:19:55] CVMFS is ok
[2023-07-22 17:19:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2023-07-22 17:19:55] Small home clusters do not require a local http proxy but it is suggested if
[2023-07-22 17:19:55] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2023-07-22 17:19:55] Further information can be found at the LHC@home message board.
[2023-07-22 17:19:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2023-07-22 17:19:55] Checking for apptainer binary...
[2023-07-22 17:19:55] apptainer is not installed, using version from CVMFS
[2023-07-22 17:19:55] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2023-07-22 17:19:57] T5810
[2023-07-22 17:19:57] apptainer works
[2023-07-22 17:19:58] Starting ATLAS job with PandaID=5911129485
[2023-07-22 17:19:58] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2023-07-22 18:01:23]  *** The last 200 lines of the pilot log: ***
[2023-07-22 18:01:23]  Setting up cpuflags 0.1.0 ... 
[2023-07-22 18:01:23] >>>>>>>>>>>>>>>>>>>>>>>>> Information for user <<<<<<<<<<<<<<<<<<<<<<<<<
[2023-07-22 18:01:23] ************************************************************************
[2023-07-22 18:01:23] x86-64-v3
[2023-07-22 18:01:23] 2023-07-23 00:01:00,155 | INFO     | pilot.user.atlas.utilities       | get_cpu_arch              | CPU arch script returned: x86-64-v3
[2023-07-22 18:01:23] 2023-07-23 00:01:00,155 | DEBUG    | pilot.control.job                | get_data_structure        | cpu arch=x86-64-v3
[2023-07-22 18:01:23] 2023-07-23 00:01:00,156 | INFO     | pilot.user.atlas.utilities       | get_memory_values         | using path: /var/lib/boinc-client/slots/6/PanDA_Pilot-5911129485/memory_monitor_summary.json (trf na
[2023-07-22 18:01:23] 2023-07-23 00:01:00,157 | DEBUG    | pilot.user.atlas.utilities       | get_memory_monitor_info   | summary_dictionary={'Avg': {'nprocs': 4.9190000000000005, 'nthreads': 5.759, 'pss': 1247959.0, 'rcha
[2023-07-22 18:01:23] 2023-07-23 00:01:00,157 | INFO     | pilot.user.atlas.utilities       | get_memory_monitor_info   | extracted standard info from prmon json
[2023-07-22 18:01:23] 2023-07-23 00:01:00,157 | INFO     | pilot.user.atlas.utilities       | get_memory_monitor_info   | extracted standard memory fields from prmon json
[2023-07-22 18:01:23] 2023-07-23 00:01:00,157 | INFO     | pilot.util.timing                | timing_report             | ..............................
[2023-07-22 18:01:23] 2023-07-23 00:01:00,158 | INFO     | pilot.util.timing                | timing_report             | . Timing measurements:
[2023-07-22 18:01:23] 2023-07-23 00:01:00,158 | INFO     | pilot.util.timing                | timing_report             | . get job = 63 s
[2023-07-22 18:01:23] 2023-07-23 00:01:00,158 | INFO     | pilot.util.timing                | timing_report             | . initial setup = 79 s
[2023-07-22 18:01:23] 2023-07-23 00:01:00,158 | INFO     | pilot.util.timing                | timing_report             | . payload setup = 123 s
[2023-07-22 18:01:23] 2023-07-23 00:01:00,158 | INFO     | pilot.util.timing                | timing_report             | . stage-in = 60 s
[2023-07-22 18:01:23] 2023-07-23 00:01:00,158 | INFO     | pilot.util.timing                | timing_report             | . payload execution = 1557 s
[2023-07-22 18:01:23] 2023-07-23 00:01:00,158 | INFO     | pilot.util.timing                | timing_report             | . stage-out = 350 s
[2023-07-22 18:01:23] 2023-07-23 00:01:00,162 | INFO     | pilot.util.timing                | timing_report             | ..............................
[2023-07-22 18:01:23] 2023-07-23 00:01:00,163 | DEBUG    | pilot.control.job                | send_state                | data={'jobId': '5911129485', 'state': 'finished', 'timestamp': '2023-07-22T17:59:49-07:00', 'siteNam
[2023-07-22 18:01:23] 2023-07-23 00:01:00,164 | DEBUG    | pilot.control.job                | write_heartbeat_to_file   | heartbeat dictionary: {'jobId': '5911129485', 'state': 'finished', 'timestamp': '2023-07-22T17:59:49
[2023-07-22 18:01:23] 2023-07-23 00:01:00,164 | DEBUG    | pilot.control.job                | write_heartbeat_to_file   | wrote heartbeat to file: /var/lib/boinc-client/slots/6/heartbeat.json
[2023-07-22 18:01:23] 2023-07-23 00:01:00,164 | DEBUG    | pilot.control.job                | queue_monitor             | job.completed=False
[2023-07-22 18:01:23] 2023-07-23 00:01:00,390 | INFO     | pilot.control.job                | make_job_report           | 
[2023-07-22 18:01:23] 2023-07-23 00:01:00,391 | INFO     | pilot.control.job                | make_job_report           | job summary report
[2023-07-22 18:01:23] 2023-07-23 00:01:00,391 | INFO     | pilot.control.job                | make_job_report           | --------------------------------------------------
[2023-07-22 18:01:23] 2023-07-23 00:01:00,391 | INFO     | pilot.control.job                | make_job_report           | PanDA job id: 5911129485
[2023-07-22 18:01:23] 2023-07-23 00:01:00,391 | INFO     | pilot.control.job                | make_job_report           | task id: NULL
[2023-07-22 18:01:23] 2023-07-23 00:01:00,391 | INFO     | pilot.control.job                | make_job_report           | errors: (none)
[2023-07-22 18:01:23] 2023-07-23 00:01:00,391 | INFO     | pilot.control.job                | make_job_report           | status: LOG_TRANSFER = DONE 
[2023-07-22 18:01:23] 2023-07-23 00:01:00,391 | INFO     | pilot.control.job                | make_job_report           | pilot state: finished 
[2023-07-22 18:01:23] 2023-07-23 00:01:00,391 | INFO     | pilot.control.job                | make_job_report           | transexitcode: 0
[2023-07-22 18:01:23] 2023-07-23 00:01:00,392 | INFO     | pilot.control.job                | make_job_report           | exeerrorcode: 0
[2023-07-22 18:01:23] 2023-07-23 00:01:00,392 | INFO     | pilot.control.job                | make_job_report           | exeerrordiag: 
[2023-07-22 18:01:23] 2023-07-23 00:01:00,392 | INFO     | pilot.control.job                | make_job_report           | exitcode: 0
[2023-07-22 18:01:23] 2023-07-23 00:01:00,392 | INFO     | pilot.control.job                | make_job_report           | exitmsg: OK
[2023-07-22 18:01:23] 2023-07-23 00:01:00,392 | INFO     | pilot.control.job                | make_job_report           | cpuconsumptiontime: 1017 s
[2023-07-22 18:01:23] 2023-07-23 00:01:00,392 | INFO     | pilot.control.job                | make_job_report           | nevents: 2
[2023-07-22 18:01:23] 2023-07-23 00:01:00,392 | INFO     | pilot.control.job                | make_job_report           | neventsw: 0
[2023-07-22 18:01:23] 2023-07-23 00:01:00,392 | INFO     | pilot.control.job                | make_job_report           | pid: 18126
[2023-07-22 18:01:23] 2023-07-23 00:01:00,392 | INFO     | pilot.control.job                | make_job_report           | pgrp: 18126
[2023-07-22 18:01:23] 2023-07-23 00:01:00,393 | INFO     | pilot.control.job                | make_job_report           | corecount: 1
[2023-07-22 18:01:23] 2023-07-23 00:01:00,393 | INFO     | pilot.control.job                | make_job_report           | event service: False
[2023-07-22 18:01:23] 2023-07-23 00:01:00,393 | INFO     | pilot.control.job                | make_job_report           | sizes: {0: 2455970, 1: 2456169, 12: 2456315, 23: 2456343, 33: 2456371, 44: 2456399, 55: 2456555, 65:
[2023-07-22 18:01:23] 2023-07-23 00:01:00,393 | INFO     | pilot.control.job                | make_job_report           | --------------------------------------------------
[2023-07-22 18:01:23] 2023-07-23 00:01:00,393 | INFO     | pilot.control.job                | make_job_report           | 
[2023-07-22 18:01:23] 2023-07-23 00:01:00,393 | DEBUG    | pilot.control.job                | has_job_completed         | ls -lF /var/lib/boinc-client/slots/6:
[2023-07-22 18:01:23] 
[2023-07-22 18:01:23] 2023-07-23 00:01:00,393 | INFO     | pilot.util.container             | print_executable          | executing command: ls -lF /var/lib/boinc-client/slots/6
[2023-07-22 18:01:23] 2023-07-23 00:01:00,577 | DEBUG    | pilot.control.job                | has_job_completed         | total 44580
[2023-07-22 18:01:23] -rw------- 1 boinc boinc      128 Jul 22 17:19 9O4MDm0Gah3n7Olcko1bjSoqABFKDmABFKDm7AsVDm8oNKDmq8mRMm.diag
[2023-07-22 18:01:23] -rw------- 1 boinc boinc  1015214 Jul 22 17:22 agis_schedconf.cvmfs.json
[2023-07-22 18:01:23] -rw-r--r-- 1 boinc boinc        0 Jul 22 17:19 boinc_lockfile
[2023-07-22 18:01:23] -rw-r--r-- 1 boinc boinc     8192 Jul 22 18:00 boinc_mmap_file
[2023-07-22 18:01:23] -rw-r--r-- 1 boinc boinc      534 Jul 22 17:54 boinc_task_state.xml
[2023-07-22 18:01:23] -rw------- 1 boinc boinc   755471 Jul 22 18:01 c320dbaa-ebdc-4213-a74a-094e74283b40_70125.1.job.log
[2023-07-22 18:01:23] -rw------- 1 boinc boinc   191266 Jul 22 17:56 c320dbaa-ebdc-4213-a74a-094e74283b40_70125.1.job.log.tgz
[2023-07-22 18:01:23] -rw------- 1 boinc boinc  1370854 Jul 22 17:22 cric_ddmendpoints.json
[2023-07-22 18:01:23] -rw-r--r-- 2 boinc boinc 38705932 Jul 22 17:19 EVNT.04972714._000036.pool.root.1
[2023-07-22 18:01:23] -rw------- 1 boinc boinc     8074 Jul 22 18:01 heartbeat.json
[2023-07-22 18:01:23] -rw-r--r-- 1 boinc boinc     9118 Jul 22 17:19 init_data.xml
[2023-07-22 18:01:23] -rw-r--r-- 2 boinc boinc   433059 Jul 22 17:19 input.tar.gz
[2023-07-22 18:01:23] -rw-r--r-- 1 boinc boinc      112 Jul 22 17:19 job.xml
[2023-07-22 18:01:23] -rw------- 1 boinc boinc     1042 Jul 22 17:53 memory_monitor_summary.json
[2023-07-22 18:01:23] -rw------- 1 boinc boinc  1834178 Jul 22 17:53 output.1.c320dbaa-ebdc-4213-a74a-094e74283b40_70125.pool.root
[2023-07-22 18:01:23] -rw------- 1 boinc boinc      464 Jul 22 17:59 output.list
[2023-07-22 18:01:23] -rw-r--r-- 1 boinc boinc     2663 Jul 22 17:19 pandaJob.out
[2023-07-22 18:01:23] drwxrwx--- 2 boinc boinc     4096 Jul 22 17:59 PanDA_Pilot-5911129485/
[2023-07-22 18:01:23] drwx------ 4 boinc boinc     4096 Jul 22 17:23 pilot3/
[2023-07-22 18:01:23] -rw------- 1 boinc boinc   421467 Jul 22 16:28 pilot3.tar.gz
[2023-07-22 18:01:23] -rw------- 1 boinc boinc   743430 Jul 22 18:01 pilotlog.txt
[2023-07-22 18:01:23] -rw-r--r-- 1 boinc boinc     4388 Jul 22 16:26 queuedata.json
[2023-07-22 18:01:23] -rwxr-xr-x 1 boinc boinc     7986 Jul 22 17:19 run_atlas*
[2023-07-22 18:01:23] -rwx------ 1 boinc boinc    27275 Jul 22 16:28 runpilot2-wrapper.sh*
[2023-07-22 18:01:23] -rw-r--r-- 1 boinc boinc      407 Jul 22 17:19 runtime_log
[2023-07-22 18:01:23] -rw-r--r-- 1 boinc boinc     7825 Jul 22 17:19 runtime_log.err
[2023-07-22 18:01:23] -rw------- 1 boinc boinc      424 Jul 22 17:19 setup.sh.local
[2023-07-22 18:01:23] drwxrwx--x 2 boinc boinc     4096 Jul 22 17:19 shared/
[2023-07-22 18:01:23] -rw-r--r-- 2 boinc boinc    17632 Jul 22 17:19 start_atlas.sh
[2023-07-22 18:01:23] -rw-r--r-- 1 boinc boinc     2027 Jul 22 17:19 stderr.txt
[2023-07-22 18:01:23] -rw-r--r-- 1 boinc boinc      107 Jul 22 17:19 wrapper_26015_x86_64-pc-linux-gnu
[2023-07-22 18:01:23] -rw-r--r-- 1 boinc boinc       25 Jul 22 18:00 wrapper_checkpoint.txt
[2023-07-22 18:01:23] 2023-07-23 00:01:00,577 | INFO     | pilot.util.queuehandling         | queue_report              | queue jobs had 0 job(s) [purged]
[2023-07-22 18:01:23] 2023-07-23 00:01:00,577 | INFO     | pilot.util.queuehandling         | queue_report              | queue payloads had 0 job(s) [purged]
[2023-07-22 18:01:23] 2023-07-23 00:01:00,577 | INFO     | pilot.util.queuehandling         | queue_report              | queue data_in had 0 job(s) [purged]
[2023-07-22 18:01:23] 2023-07-23 00:01:00,577 | INFO     | pilot.util.queuehandling         | queue_report              | queue data_out had 0 job(s) [purged]
[2023-07-22 18:01:23] 2023-07-23 00:01:00,577 | INFO     | pilot.util.queuehandling         | queue_report              | queue current_data_in had 0 job(s) [purged]
[2023-07-22 18:01:23] 2023-07-23 00:01:00,577 | INFO     | pilot.util.queuehandling         | queue_report              | queue validated_jobs had 0 job(s) [purged]
[2023-07-22 18:01:23] 2023-07-23 00:01:00,578 | INFO     | pilot.util.queuehandling         | queue_report              | queue validated_payloads had 0 job(s) [purged]
[2023-07-22 18:01:23] 2023-07-23 00:01:00,578 | INFO     | pilot.util.queuehandling         | queue_report              | queue monitored_payloads had 0 job(s) [purged]
[2023-07-22 18:01:23] 2023-07-23 00:01:00,578 | INFO     | pilot.util.queuehandling         | queue_report              | queue finished_jobs had 0 job(s) [purged]
[2023-07-22 18:01:23] 2023-07-23 00:01:00,578 | INFO     | pilot.util.queuehandling         | queue_report              | queue finished_payloads had 0 job(s) [purged]
[2023-07-22 18:01:23] 2023-07-23 00:01:00,578 | INFO     | pilot.util.queuehandling         | queue_report              | queue finished_data_in had 1 job(s) [purged]
[2023-07-22 18:01:23] 2023-07-23 00:01:00,578 | INFO     | pilot.util.queuehandling         | queue_report              | queue finished_data_out had 0 job(s) [purged]
[2023-07-22 18:01:23] 2023-07-23 00:01:00,578 | INFO     | pilot.util.queuehandling         | queue_report              | queue failed_jobs had 0 job(s) [purged]
[2023-07-22 18:01:23] 2023-07-23 00:01:00,578 | INFO     | pilot.util.queuehandling         | queue_report              | queue failed_payloads had 0 job(s) [purged]
[2023-07-22 18:01:23] 2023-07-23 00:01:00,578 | INFO     | pilot.util.queuehandling         | queue_report              | queue failed_data_in had 0 job(s) [purged]
[2023-07-22 18:01:23] 2023-07-23 00:01:00,578 | INFO     | pilot.util.queuehandling         | queue_report              | queue failed_data_out had 0 job(s) [purged]
[2023-07-22 18:01:23] 2023-07-23 00:01:00,579 | INFO     | pilot.util.queuehandling         | queue_report              | queue completed_jobs had 0 job(s) [purged]
[2023-07-22 18:01:23] 2023-07-23 00:01:00,579 | INFO     | pilot.util.queuehandling         | queue_report              | queue completed_jobids has 1 job(s)
[2023-07-22 18:01:23] 2023-07-23 00:01:00,579 | INFO     | pilot.util.queuehandling         | queue_report              | queue realtimelog_payloads had 0 job(s) [purged]
[2023-07-22 18:01:23] 2023-07-23 00:01:00,579 | INFO     | pilot.util.queuehandling         | queue_report              | queue messages had 0 job(s) [purged]
[2023-07-22 18:01:23] 2023-07-23 00:01:00,579 | INFO     | pilot.control.job                | has_job_completed         | job 5911129485 has completed (purged errors)
[2023-07-22 18:01:23] 2023-07-23 00:01:00,579 | DEBUG    | pilot.util.realtimelogger        | cleanup                   | attempting real-time logger cleanup
[2023-07-22 18:01:23] 2023-07-23 00:01:00,579 | INFO     | pilot.util.processes             | cleanup                   | overall cleanup function is called
[2023-07-22 18:01:23] 2023-07-23 00:01:00,582 | DEBUG    | pilot.util.processes             | cleanup                   | work directory was removed: /var/lib/boinc-client/slots/6/PanDA_Pilot-5911129485
[2023-07-22 18:01:23] 2023-07-23 00:01:01,590 | INFO     | pilot.info.jobdata               | collect_zombies           | --- collectZombieJob: --- 10, [18126]
[2023-07-22 18:01:23] 2023-07-23 00:01:01,591 | INFO     | pilot.info.jobdata               | collect_zombies           | zombie collector trying to kill pid 18126
[2023-07-22 18:01:23] 2023-07-23 00:01:01,591 | INFO     | pilot.info.jobdata               | collect_zombies           | harmless exception when collecting zombies: [Errno 10] No child processes
[2023-07-22 18:01:23] 2023-07-23 00:01:02,598 | INFO     | pilot.util.processes             | cleanup                   | collected zombie processes
[2023-07-22 18:01:23] 2023-07-23 00:01:02,599 | INFO     | pilot.util.processes             | cleanup                   | will now attempt to kill all subprocesses of pid=18126
[2023-07-22 18:01:23] 2023-07-23 00:01:03,143 | INFO     | pilot.util.processes             | kill_processes            | process IDs to be killed: [18126] (in reverse order)
[2023-07-22 18:01:23] 2023-07-23 00:01:03,371 | WARNING  | pilot.util.processes             | kill_processes            | found no corresponding commands to process id(s)
[2023-07-22 18:01:23] 2023-07-23 00:01:03,372 | INFO     | pilot.util.processes             | kill_orphans              | Do not look for orphan processes in BOINC jobs
[2023-07-22 18:01:23] 2023-07-23 00:01:03,372 | DEBUG    | pilot.util.queuehandling         | purge_queue               | queue purged
[2023-07-22 18:01:23] 2023-07-23 00:01:03,372 | INFO     | pilot.control.job                | retrieve                  | ready for new job
[2023-07-22 18:01:23] 2023-07-23 00:01:03,372 | INFO     | root                             | retrieve                  | pilot has finished with previous job - re-establishing logging
[2023-07-22 18:01:23] 2023-07-23 00:01:03,373 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | *************************************
[2023-07-22 18:01:23] 2023-07-23 00:01:03,374 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | ***  PanDA Pilot version 3.6.5.7  ***
[2023-07-22 18:01:23] 2023-07-23 00:01:03,374 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | *************************************
[2023-07-22 18:01:23] 2023-07-23 00:01:03,374 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | 
[2023-07-22 18:01:23] 2023-07-23 00:01:03,392 | INFO     | pilot.util.auxiliary             | display_architecture_info | architecture information:
[2023-07-22 18:01:23] 2023-07-23 00:01:03,399 | INFO     | pilot.util.container             | print_executable          | executing command: cat /etc/os-release
[2023-07-22 18:01:23] 2023-07-23 00:01:03,437 | INFO     | pilot.util.filehandling          | dump                      | cat /etc/os-release:
[2023-07-22 18:01:23] NAME="CentOS Linux"
[2023-07-22 18:01:23] VERSION="7 (Core)"
[2023-07-22 18:01:23] ID="centos"
[2023-07-22 18:01:23] ID_LIKE="rhel fedora"
[2023-07-22 18:01:23] VERSION_ID="7"
[2023-07-22 18:01:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2023-07-22 18:01:23] ANSI_COLOR="0;31"
[2023-07-22 18:01:23] CPE_NAME="cpe:/o:centos:centos:7"
[2023-07-22 18:01:23] HOME_URL="https://www.centos.org/"
[2023-07-22 18:01:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2023-07-22 18:01:23] 
[2023-07-22 18:01:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2023-07-22 18:01:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2023-07-22 18:01:23] REDHAT_SUPPORT_PRODUCT="centos"
[2023-07-22 18:01:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2023-07-22 18:01:23] 
[2023-07-22 18:01:23] 2023-07-23 00:01:03,438 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | *************************************
[2023-07-22 18:01:23] 2023-07-23 00:01:03,939 | DEBUG    | pilot.util.monitoring            | check_local_space         | checking local space on /var/lib/boinc-client/slots/6
[2023-07-22 18:01:23] 2023-07-23 00:01:03,939 | INFO     | pilot.util.container             | print_executable          | executing command: df -mP /var/lib/boinc-client/slots/6
[2023-07-22 18:01:23] 2023-07-23 00:01:03,995 | DEBUG    | pilot.util.workernode            | get_local_disk_space      | stdout=Filesystem     1048576-blocks   Used Available Capacity Mounted on
[2023-07-22 18:01:23] /dev/sda2              479119 258507    196203      57% /var/lib/boinc-client/slots/6
[2023-07-22 18:01:23] 2023-07-23 00:01:03,995 | DEBUG    | pilot.util.workernode            | get_local_disk_space      | stderr=
[2023-07-22 18:01:23] 2023-07-23 00:01:03,995 | INFO     | pilot.util.monitoring            | check_local_space         | sufficient remaining disk space (205733756928 B)
[2023-07-22 18:01:23] 2023-07-23 00:01:03,995 | WARNING  | pilot.control.job                | proceed_with_getjob       | since timefloor is set to 0, pilot was only allowed to run one job
[2023-07-22 18:01:23] 2023-07-23 00:01:03,996 | WARNING  | pilot.control.job                | retrieve                  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2023-07-22 18:01:23] 2023-07-23 00:01:03,998 | WARNING  | pilot.control.monitor            | control                   | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2023-07-22 18:01:23] 2023-07-23 00:01:03,999 | INFO     | pilot.util.queuehandling         | abort_jobs_in_queues      | found 0 job(s) in 20 queues
[2023-07-22 18:01:23] 2023-07-23 00:01:03,999 | WARNING  | pilot.control.monitor            | run_checks                | pilot monitor received instruction that args.graceful_stop has been set
[2023-07-22 18:01:23] 2023-07-23 00:01:03,999 | WARNING  | pilot.control.monitor            | run_checks                | will wait for a maximum of 300 s for threads to finish
[2023-07-22 18:01:23] 2023-07-23 00:01:04,342 | DEBUG    | pilot.control.job                | control                   | job control ending since graceful_stop has been set
[2023-07-22 18:01:23] 2023-07-23 00:01:04,466 | WARNING  | pilot.util.common                | should_abort              | data:copytool_out:received graceful stop - abort after this iteration
[2023-07-22 18:01:23] 2023-07-23 00:01:04,520 | WARNING  | pilot.util.common                | should_abort              | job:job_monitor:received graceful stop - abort after this iteration
[2023-07-22 18:01:23] 2023-07-23 00:01:04,520 | INFO     | pilot.control.job                | job_monitor               | aborting loop
[2023-07-22 18:01:23] 2023-07-23 00:01:04,690 | DEBUG    | pilot.control.data               | control                   | data control ending since graceful_stop has been set
[2023-07-22 18:01:23] 2023-07-23 00:01:05,003 | INFO     | pilot.control.job                | retrieve                  | [job] retrieve thread has finished
[2023-07-22 18:01:23] 2023-07-23 00:01:05,006 | WARNING  | pilot.util.common                | should_abort              | data:queue_monitoring:received graceful stop - abort after this iteration
[2023-07-22 18:01:23] 2023-07-23 00:01:05,014 | INFO     | pilot.control.job                | create_data_payload       | [job] create_data_payload thread has finished
[2023-07-22 18:01:23] 2023-07-23 00:01:05,202 | DEBUG    | pilot.control.payload            | control                   | payload control ending since graceful_stop has been set
[2023-07-22 18:01:23] 2023-07-23 00:01:05,247 | INFO     | pilot.control.payload            | validate_post             | [payload] validate_post thread has finished
[2023-07-22 18:01:23] 2023-07-23 00:01:05,287 | INFO     | pilot.control.data               | copytool_in               | [data] copytool_in thread has finished
[2023-07-22 18:01:23] 2023-07-23 00:01:05,294 | INFO     | pilot.control.payload            | validate_pre              | [payload] validate_pre thread has finished
[2023-07-22 18:01:23] 2023-07-23 00:01:05,351 | INFO     | pilot.control.job                | control                   | [job] control thread has finished
[2023-07-22 18:01:23] 2023-07-23 00:01:05,418 | WARNING  | pilot.util.common                | should_abort              | job:queue_monitor:received graceful stop - abort after this iteration
[2023-07-22 18:01:23] 2023-07-23 00:01:05,527 | INFO     | pilot.control.job                | job_monitor               | [job] job monitor thread has finished
[2023-07-22 18:01:23] 2023-07-23 00:01:05,699 | INFO     | pilot.control.data               | control                   | [data] control thread has finished
[2023-07-22 18:01:23] 2023-07-23 00:01:05,843 | INFO     | pilot.control.job                | validate                  | [job] validate thread has finished
[2023-07-22 18:01:23] 2023-07-23 00:01:05,971 | INFO     | pilot.control.payload            | execute_payloads          | [payload] execute_payloads thread has finished
[2023-07-22 18:01:23] 2023-07-23 00:01:06,211 | INFO     | pilot.control.payload            | control                   | [payload] control thread has finished
[2023-07-22 18:01:23] 2023-07-23 00:01:06,427 | INFO     | pilot.control.job                | queue_monitor             | [job] queue monitor thread has finished
[2023-07-22 18:01:23] 2023-07-23 00:01:06,475 | INFO     | pilot.control.data               | copytool_out              | [data] copytool_out thread has finished
[2023-07-22 18:01:23] 2023-07-23 00:01:06,482 | INFO     | pilot.control.payload            | failed_post               | [payload] failed_post thread has finished
[2023-07-22 18:01:23] 2023-07-23 00:01:09,026 | INFO     | pilot.control.data               | queue_monitoring          | [data] queue_monitor thread has finished
[2023-07-22 18:01:23] 2023-07-23 00:01:15,042 | INFO     | pilot.control.payload            | get_logging_info          | job.realtimelogging is not enabled
[2023-07-22 18:01:23] 2023-07-23 00:01:15,043 | DEBUG    | pilot.control.payload            | run_realtimelog           | real-time logging not needed at this point
[2023-07-22 18:01:23] 2023-07-23 00:01:15,043 | DEBUG    | pilot.control.payload            | run_realtimelog           | realtime logger was not found, waiting ..
[2023-07-22 18:01:23] 2023-07-23 00:01:16,050 | INFO     | pilot.control.payload            | run_realtimelog           | [payload] run_realtimelog thread has finished
[2023-07-22 18:01:23] 2023-07-23 00:01:17,410 | INFO     | pilot.util.processes             | threads_aborted           | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139895
[2023-07-22 18:01:23] 2023-07-23 00:01:17,411 | DEBUG    | pilot.workflow.generic           | run                       | will proceed to set job_aborted
[2023-07-22 18:01:23] 2023-07-23 00:01:18,110 | WARNING  | pilot.control.monitor            | run_checks                | job_aborted has been set - aborting pilot monitoring
[2023-07-22 18:01:23] 2023-07-23 00:01:18,111 | INFO     | pilot.control.monitor            | control                   | [monitor] control thread has ended
[2023-07-22 18:01:23] 2023-07-23 00:01:22,438 | DEBUG    | pilot.workflow.generic           | run                       | all relevant threads have aborted (thread count=1)
[2023-07-22 18:01:23] 2023-07-23 00:01:22,439 | INFO     | pilot.workflow.generic           | run                       | end of generic workflow (traces error code: 0)
[2023-07-22 18:01:23] 2023-07-23 00:01:22,439 | DEBUG    | root                             | <module>                  | trace=<class 'pilot.workflow.generic.traces'>
[2023-07-22 18:01:23] 2023-07-23 00:01:22,439 | INFO     | root                             | wrap_up                   | traces error code: 0
[2023-07-22 18:01:23] 2023-07-23 00:01:22,439 | INFO     | root                             | wrap_up                   | pilot has finished (exit code=0, shell exit code=0)
[2023-07-22 18:01:23] 2023-07-23 00:01:22,694 [wrapper] ==== pilot stdout END ====
[2023-07-22 18:01:23] 2023-07-23 00:01:22,730 [wrapper] ==== wrapper stdout RESUME ====
[2023-07-22 18:01:23] 2023-07-23 00:01:22,759 [wrapper] pilotpid: 10398
[2023-07-22 18:01:23] 2023-07-23 00:01:22,783 [wrapper] Pilot exit status: 0
[2023-07-22 18:01:23] 2023-07-23 00:01:22,970 [wrapper] pandaids: 5911129485
[2023-07-22 18:01:23] 2023-07-23 00:01:23,058 [wrapper] apfmon messages muted
[2023-07-22 18:01:23] 2023-07-23 00:01:23,106 [wrapper] Test setup, not cleaning
[2023-07-22 18:01:23] 2023-07-23 00:01:23,154 [wrapper] ==== wrapper stdout END ====
[2023-07-22 18:01:23] 2023-07-23 00:01:23,168 [wrapper] ==== wrapper stderr END ====
[2023-07-22 18:01:23] 2023-07-23 00:01:23,214 [wrapper] wrapperexiting ec=0, duration=2484
[2023-07-22 18:01:23] 2023-07-23 00:01:23,247 [wrapper] apfmon messages muted
[2023-07-22 18:01:23]  *** Error codes and diagnostics ***
[2023-07-22 18:01:23]     "exeErrorCode": 0,
[2023-07-22 18:01:23]     "exeErrorDiag": "",
[2023-07-22 18:01:23]     "pilotErrorCode": 0,
[2023-07-22 18:01:23]     "pilotErrorDiag": "",
[2023-07-22 18:01:23]  *** Listing of results directory ***
[2023-07-22 18:01:24] total 46656
[2023-07-22 18:01:24] -rw-r--r-- 1 boinc boinc     4388 Jul 22 16:26 queuedata.json
[2023-07-22 18:01:24] -rwx------ 1 boinc boinc    27275 Jul 22 16:28 runpilot2-wrapper.sh
[2023-07-22 18:01:24] -rw------- 1 boinc boinc   421467 Jul 22 16:28 pilot3.tar.gz
[2023-07-22 18:01:24] -rw-r--r-- 1 boinc boinc      107 Jul 22 17:19 wrapper_26015_x86_64-pc-linux-gnu
[2023-07-22 18:01:24] -rwxr-xr-x 1 boinc boinc     7986 Jul 22 17:19 run_atlas
[2023-07-22 18:01:24] -rw-r--r-- 1 boinc boinc      112 Jul 22 17:19 job.xml
[2023-07-22 18:01:24] -rw-r--r-- 2 boinc boinc    17632 Jul 22 17:19 start_atlas.sh
[2023-07-22 18:01:24] drwxrwx--x 2 boinc boinc     4096 Jul 22 17:19 shared
[2023-07-22 18:01:24] -rw-r--r-- 2 boinc boinc   433059 Jul 22 17:19 input.tar.gz
[2023-07-22 18:01:24] -rw-r--r-- 1 boinc boinc     9118 Jul 22 17:19 init_data.xml
[2023-07-22 18:01:24] -rw-r--r-- 2 boinc boinc 38705932 Jul 22 17:19 EVNT.04972714._000036.pool.root.1
[2023-07-22 18:01:24] -rw-r--r-- 1 boinc boinc        0 Jul 22 17:19 boinc_lockfile
[2023-07-22 18:01:24] -rw-r--r-- 1 boinc boinc     2663 Jul 22 17:19 pandaJob.out
[2023-07-22 18:01:24] -rw------- 1 boinc boinc      424 Jul 22 17:19 setup.sh.local
[2023-07-22 18:01:24] -rw------- 1 boinc boinc  1370854 Jul 22 17:22 cric_ddmendpoints.json
[2023-07-22 18:01:24] -rw------- 1 boinc boinc  1015214 Jul 22 17:22 agis_schedconf.cvmfs.json
[2023-07-22 18:01:24] drwx------ 4 boinc boinc     4096 Jul 22 17:23 pilot3
[2023-07-22 18:01:24] -rw------- 1 boinc boinc  1834178 Jul 22 17:53 output.1.c320dbaa-ebdc-4213-a74a-094e74283b40_70125.pool.root
[2023-07-22 18:01:24] -rw------- 1 boinc boinc     1042 Jul 22 17:53 memory_monitor_summary.json
[2023-07-22 18:01:24] -rw-r--r-- 1 boinc boinc      534 Jul 22 17:54 boinc_task_state.xml
[2023-07-22 18:01:24] -rw------- 1 boinc boinc   191266 Jul 22 17:56 c320dbaa-ebdc-4213-a74a-094e74283b40_70125.1.job.log.tgz
[2023-07-22 18:01:24] -rw------- 1 boinc boinc     8074 Jul 22 18:01 heartbeat.json
[2023-07-22 18:01:24] -rw-r--r-- 1 boinc boinc     8192 Jul 22 18:01 boinc_mmap_file
[2023-07-22 18:01:24] -rw-r--r-- 1 boinc boinc       25 Jul 22 18:01 wrapper_checkpoint.txt
[2023-07-22 18:01:24] -rw------- 1 boinc boinc     8569 Jul 22 18:01 pilotlog.txt
[2023-07-22 18:01:24] -rw------- 1 boinc boinc   772035 Jul 22 18:01 c320dbaa-ebdc-4213-a74a-094e74283b40_70125.1.job.log
[2023-07-22 18:01:24] -rw------- 1 boinc boinc      464 Jul 22 18:01 output.list
[2023-07-22 18:01:24] -rw-r--r-- 1 boinc boinc      748 Jul 22 18:01 runtime_log
[2023-07-22 18:01:24] -rw------- 1 boinc boinc  2816000 Jul 22 18:01 result.tar.gz
[2023-07-22 18:01:24] -rw-r--r-- 1 boinc boinc    11949 Jul 22 18:01 runtime_log.err
[2023-07-22 18:01:24] -rw------- 1 boinc boinc      632 Jul 22 18:01 9O4MDm0Gah3n7Olcko1bjSoqABFKDmABFKDm7AsVDm8oNKDmq8mRMm.diag
[2023-07-22 18:01:24] -rw-r--r-- 1 boinc boinc    29356 Jul 22 18:01 stderr.txt
[2023-07-22 18:01:24] HITS file was successfully produced:
[2023-07-22 18:01:24] -rw------- 1 boinc boinc 1834178 Jul 22 17:53 shared/HITS.pool.root.1
[2023-07-22 18:01:24]  *** Contents of shared directory: ***
[2023-07-22 18:01:24] total 42788
[2023-07-22 18:01:24] -rw-r--r-- 2 boinc boinc    17632 Jul 22 17:19 start_atlas.sh
[2023-07-22 18:01:24] -rw-r--r-- 2 boinc boinc   433059 Jul 22 17:19 input.tar.gz
[2023-07-22 18:01:24] -rw-r--r-- 2 boinc boinc 38705932 Jul 22 17:19 ATLAS.root_0
[2023-07-22 18:01:24] -rw------- 1 boinc boinc  1834178 Jul 22 17:53 HITS.pool.root.1
[2023-07-22 18:01:24] -rw------- 1 boinc boinc  2816000 Jul 22 18:01 result.tar.gz
18:01:26 (6597): run_atlas exited; CPU time 985.923135
18:01:26 (6597): called boinc_finish(0)

</stderr_txt>
]]>


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