Name 012NDmT6gh3n7Olcko1bjSoqABFKDmABFKDm7AsVDmWqNKDm5uULym_0
Workunit 2320222
Created 23 Jul 2023, 5:46:35 UTC
Sent 23 Jul 2023, 5:50:34 UTC
Report deadline 30 Jul 2023, 5:50:34 UTC
Received 23 Jul 2023, 6:15:48 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 4721
Run time 17 min 33 sec
CPU time 5 min 36 sec
Validate state Valid
Credit 18.61
Device peak FLOPS 5.90 GFLOPS
Application version ATLAS Simulation v3.01 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 1.56 GB
Peak swap size 2.14 GB
Peak disk usage 81.79 MB

Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:57:43 (3366393): wrapper (7.7.26015): starting
07:57:43 (3366393): wrapper: running run_atlas (--nthreads 1)
[2023-07-23 07:57:43] Arguments: --nthreads 1
[2023-07-23 07:57:43] Threads: 1
[2023-07-23 07:57:43] Checking for CVMFS
[2023-07-23 07:57:44] Probing /cvmfs/atlas.cern.ch... OK
[2023-07-23 07:57:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2023-07-23 07:57:44] Running cvmfs_config stat atlas.cern.ch
[2023-07-23 07:57:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2023-07-23 07:57:45] 2.10.1.0 3346479 15 40956 121609 0 84 3241040 4096001 0 130560 0 73837 99.999 2 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://10.116.178.201:3128 1
[2023-07-23 07:57:45] CVMFS is ok
[2023-07-23 07:57:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2023-07-23 07:57:45] Checking for apptainer binary...
[2023-07-23 07:57:45] Using apptainer found in PATH at /usr/bin/apptainer
[2023-07-23 07:57:45] Running /usr/bin/apptainer --version
[2023-07-23 07:57:45] apptainer version 1.1.9-1.el9
[2023-07-23 07:57:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2023-07-23 07:57:45] P620-CentOS9
[2023-07-23 07:57:45] apptainer works
[2023-07-23 07:57:45] Starting ATLAS job with PandaID=5911409180
[2023-07-23 07:57:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2023-07-23 08:15:37]  *** The last 200 lines of the pilot log: ***
[2023-07-23 08:15:37] 2023-07-23 06:14:44,571 | INFO     | maximum number of monitored processes: 5
[2023-07-23 08:15:37] 2023-07-23 06:14:47,075 | INFO     | monitor loop #184: job 0:5911409180 is in state 'stageout'
[2023-07-23 08:15:37] 2023-07-23 06:14:47,095 | INFO     | number of running child processes to parent process 3376703: 1
[2023-07-23 08:15:37] 2023-07-23 06:14:47,096 | INFO     | maximum number of monitored processes: 5
[2023-07-23 08:15:37] 2023-07-23 06:14:49,600 | INFO     | monitor loop #185: job 0:5911409180 is in state 'stageout'
[2023-07-23 08:15:37] 2023-07-23 06:14:49,621 | INFO     | number of running child processes to parent process 3376703: 1
[2023-07-23 08:15:37] 2023-07-23 06:14:49,622 | INFO     | maximum number of monitored processes: 5
[2023-07-23 08:15:37] 2023-07-23 06:14:52,124 | INFO     | monitor loop #186: job 0:5911409180 is in state 'stageout'
[2023-07-23 08:15:37] 2023-07-23 06:14:52,145 | INFO     | number of running child processes to parent process 3376703: 1
[2023-07-23 08:15:37] 2023-07-23 06:14:52,145 | INFO     | maximum number of monitored processes: 5
[2023-07-23 08:15:37] 2023-07-23 06:14:54,650 | INFO     | monitor loop #187: job 0:5911409180 is in state 'stageout'
[2023-07-23 08:15:37] 2023-07-23 06:14:54,670 | INFO     | number of running child processes to parent process 3376703: 1
[2023-07-23 08:15:37] 2023-07-23 06:14:54,670 | INFO     | maximum number of monitored processes: 5
[2023-07-23 08:15:37] 2023-07-23 06:14:57,174 | INFO     | monitor loop #188: job 0:5911409180 is in state 'stageout'
[2023-07-23 08:15:37] 2023-07-23 06:14:57,195 | INFO     | number of running child processes to parent process 3376703: 1
[2023-07-23 08:15:37] 2023-07-23 06:14:57,195 | INFO     | maximum number of monitored processes: 5
[2023-07-23 08:15:37] 2023-07-23 06:14:59,699 | INFO     | monitor loop #189: job 0:5911409180 is in state 'stageout'
[2023-07-23 08:15:37] 2023-07-23 06:14:59,720 | INFO     | number of running child processes to parent process 3376703: 1
[2023-07-23 08:15:37] 2023-07-23 06:14:59,720 | INFO     | maximum number of monitored processes: 5
[2023-07-23 08:15:37] 2023-07-23 06:15:02,225 | INFO     | monitor loop #190: job 0:5911409180 is in state 'stageout'
[2023-07-23 08:15:37] 2023-07-23 06:15:02,245 | INFO     | number of running child processes to parent process 3376703: 1
[2023-07-23 08:15:37] 2023-07-23 06:15:02,245 | INFO     | maximum number of monitored processes: 5
[2023-07-23 08:15:37] 2023-07-23 06:15:04,747 | INFO     | monitor loop #191: job 0:5911409180 is in state 'stageout'
[2023-07-23 08:15:37] 2023-07-23 06:15:04,767 | INFO     | number of running child processes to parent process 3376703: 1
[2023-07-23 08:15:37] 2023-07-23 06:15:04,768 | INFO     | maximum number of monitored processes: 5
[2023-07-23 08:15:37] 2023-07-23 06:15:07,272 | INFO     | monitor loop #192: job 0:5911409180 is in state 'stageout'
[2023-07-23 08:15:37] 2023-07-23 06:15:07,293 | INFO     | number of running child processes to parent process 3376703: 1
[2023-07-23 08:15:37] 2023-07-23 06:15:07,293 | INFO     | maximum number of monitored processes: 5
[2023-07-23 08:15:37] 2023-07-23 06:15:09,797 | INFO     | monitor loop #193: job 0:5911409180 is in state 'stageout'
[2023-07-23 08:15:37] 2023-07-23 06:15:09,819 | INFO     | number of running child processes to parent process 3376703: 1
[2023-07-23 08:15:37] 2023-07-23 06:15:09,819 | INFO     | maximum number of monitored processes: 5
[2023-07-23 08:15:37] 2023-07-23 06:15:10,148 | INFO     | [attempt=3/3] loading data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json
[2023-07-23 08:15:37] 2023-07-23 06:15:10,233 | WARNING  | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: 
[2023-07-23 08:15:37] 2023-07-23 06:15:10,233 | WARNING  | cache file=/var/lib/boinc/slots/5/agis_ddmendpoints.agis.ALL.json is not available: [Errno 2] No such file or directory: '/var/lib/boinc/slots/5/agis_ddmendpoints.
[2023-07-23 08:15:37] 2023-07-23 06:15:10,261 | INFO     | transferring file 3aba06fb-8555-4293-8f66-cc7cec3bc6b5_90753.job.log.tgz from /var/lib/boinc/slots/5/PanDA_Pilot-5911409180/3aba06fb-8555-4293-8f66-cc7cec3bc6b5_90
[2023-07-23 08:15:37] 2023-07-23 06:15:10,262 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/5/PanDA_Pilot-5911409180/3aba06fb-8555-4293-8f66-cc7cec3bc6b5_90753.job.log.tgz /var/lib/boinc/slots/5/3aba
[2023-07-23 08:15:37] 2023-07-23 06:15:10,268 | INFO     | Adding to output.list: 3aba06fb-8555-4293-8f66-cc7cec3bc6b5_90753.job.log.tgz davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/5e/69/3aba06fb-8555-42
[2023-07-23 08:15:37] 2023-07-23 06:15:10,268 | INFO     | summary of transferred files:
[2023-07-23 08:15:37] 2023-07-23 06:15:10,268 | INFO     |  -- lfn=3aba06fb-8555-4293-8f66-cc7cec3bc6b5_90753.job.log.tgz, status_code=0, status=transferred
[2023-07-23 08:15:37] 2023-07-23 06:15:10,268 | INFO     | stage-out finished correctly
[2023-07-23 08:15:37] 2023-07-23 06:15:11,852 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2023-07-23 08:15:37] 2023-07-23 06:15:11,895 | INFO     | job 5911409180 has state=finished
[2023-07-23 08:15:37] 2023-07-23 06:15:11,895 | INFO     | preparing for final server update for job 5911409180 in state='finished'
[2023-07-23 08:15:37] 2023-07-23 06:15:11,895 | INFO     | this job has now completed (state=finished)
[2023-07-23 08:15:37] 2023-07-23 06:15:11,895 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2023-07-23 08:15:37] 2023-07-23 06:15:11,895 | INFO     | job 5911409180 has finished - writing final server update
[2023-07-23 08:15:37] 2023-07-23 06:15:11,895 | WARNING  | wrong length of table data, x=[1690092342.0], y=[1733756.0] (must be same and length>=4)
[2023-07-23 08:15:37] 2023-07-23 06:15:11,896 | INFO     | total number of processed events: 2 (read)
[2023-07-23 08:15:37] 2023-07-23 06:15:11,896 | INFO     | executing command: lscpu
[2023-07-23 08:15:37] 2023-07-23 06:15:11,903 | INFO     | found 1 cores (1 cores per socket, 1 sockets)
[2023-07-23 08:15:37] 2023-07-23 06:15:11,903 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2023-07-23 08:15:37] 2023-07-23 06:15:11,911 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2023-07-23 08:15:37] 2023-07-23 06:15:12,324 | INFO     | monitor loop #194: job 0:5911409180 is in state 'finished'
[2023-07-23 08:15:37] 2023-07-23 06:15:12,324 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-07-23 08:15:37] 2023-07-23 06:15:14,827 | INFO     | monitor loop #195: job 0:5911409180 is in state 'finished'
[2023-07-23 08:15:37] 2023-07-23 06:15:14,828 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-07-23 08:15:37] 2023-07-23 06:15:15,914 | INFO     | 1048s have passed since pilot start
[2023-07-23 08:15:37] 2023-07-23 06:15:17,347 | INFO     | monitor loop #196: job 0:5911409180 is in state 'finished'
[2023-07-23 08:15:37] 2023-07-23 06:15:17,347 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-07-23 08:15:37] 2023-07-23 06:15:18,301 | INFO     | CPU arch script returned: x86-64-v2
[2023-07-23 08:15:37] 2023-07-23 06:15:18,301 | INFO     | using path: /var/lib/boinc/slots/5/PanDA_Pilot-5911409180/memory_monitor_summary.json (trf name=prmon)
[2023-07-23 08:15:37] 2023-07-23 06:15:18,302 | INFO     | extracted standard info from prmon json
[2023-07-23 08:15:37] 2023-07-23 06:15:18,302 | INFO     | extracted standard memory fields from prmon json
[2023-07-23 08:15:37] 2023-07-23 06:15:18,302 | INFO     | ..............................
[2023-07-23 08:15:37] 2023-07-23 06:15:18,302 | INFO     | . Timing measurements:
[2023-07-23 08:15:37] 2023-07-23 06:15:18,302 | INFO     | . get job = 54 s
[2023-07-23 08:15:37] 2023-07-23 06:15:18,302 | INFO     | . initial setup = 42 s
[2023-07-23 08:15:37] 2023-07-23 06:15:18,302 | INFO     | . payload setup = 3 s
[2023-07-23 08:15:37] 2023-07-23 06:15:18,302 | INFO     | . stage-in = 52 s
[2023-07-23 08:15:37] 2023-07-23 06:15:18,302 | INFO     | . payload execution = 480 s
[2023-07-23 08:15:37] 2023-07-23 06:15:18,302 | INFO     | . stage-out = 394 s
[2023-07-23 08:15:37] 2023-07-23 06:15:18,302 | INFO     | ..............................
[2023-07-23 08:15:37] 2023-07-23 06:15:18,454 | INFO     | 
[2023-07-23 08:15:37] 2023-07-23 06:15:18,455 | INFO     | job summary report
[2023-07-23 08:15:37] 2023-07-23 06:15:18,455 | INFO     | --------------------------------------------------
[2023-07-23 08:15:37] 2023-07-23 06:15:18,455 | INFO     | PanDA job id: 5911409180
[2023-07-23 08:15:37] 2023-07-23 06:15:18,455 | INFO     | task id: NULL
[2023-07-23 08:15:37] 2023-07-23 06:15:18,455 | INFO     | errors: (none)
[2023-07-23 08:15:37] 2023-07-23 06:15:18,455 | INFO     | status: LOG_TRANSFER = DONE 
[2023-07-23 08:15:37] 2023-07-23 06:15:18,455 | INFO     | pilot state: finished 
[2023-07-23 08:15:37] 2023-07-23 06:15:18,455 | INFO     | transexitcode: 0
[2023-07-23 08:15:37] 2023-07-23 06:15:18,455 | INFO     | exeerrorcode: 0
[2023-07-23 08:15:37] 2023-07-23 06:15:18,455 | INFO     | exeerrordiag: 
[2023-07-23 08:15:37] 2023-07-23 06:15:18,455 | INFO     | exitcode: 0
[2023-07-23 08:15:37] 2023-07-23 06:15:18,455 | INFO     | exitmsg: OK
[2023-07-23 08:15:37] 2023-07-23 06:15:18,455 | INFO     | cpuconsumptiontime: 337 s
[2023-07-23 08:15:37] 2023-07-23 06:15:18,455 | INFO     | nevents: 2
[2023-07-23 08:15:37] 2023-07-23 06:15:18,455 | INFO     | neventsw: 0
[2023-07-23 08:15:37] 2023-07-23 06:15:18,455 | INFO     | pid: 3376703
[2023-07-23 08:15:37] 2023-07-23 06:15:18,455 | INFO     | pgrp: 3376703
[2023-07-23 08:15:37] 2023-07-23 06:15:18,455 | INFO     | corecount: 1
[2023-07-23 08:15:37] 2023-07-23 06:15:18,455 | INFO     | event service: False
[2023-07-23 08:15:37] 2023-07-23 06:15:18,455 | INFO     | sizes: {0: 2456413, 11: 2456559, 21: 2456587, 32: 2456615, 42: 2456643, 53: 2456671, 54: 2456887, 64: 2456915, 486: 2476340, 487: 2476339, 881: 2485749, 882: 24860
[2023-07-23 08:15:37] 2023-07-23 06:15:18,455 | INFO     | --------------------------------------------------
[2023-07-23 08:15:37] 2023-07-23 06:15:18,455 | INFO     | 
[2023-07-23 08:15:37] 2023-07-23 06:15:18,455 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2023-07-23 08:15:37] 2023-07-23 06:15:18,462 | INFO     | queue jobs had 0 job(s) [purged]
[2023-07-23 08:15:37] 2023-07-23 06:15:18,462 | INFO     | queue payloads had 0 job(s) [purged]
[2023-07-23 08:15:37] 2023-07-23 06:15:18,462 | INFO     | queue data_in had 0 job(s) [purged]
[2023-07-23 08:15:37] 2023-07-23 06:15:18,462 | INFO     | queue data_out had 0 job(s) [purged]
[2023-07-23 08:15:37] 2023-07-23 06:15:18,462 | INFO     | queue current_data_in had 0 job(s) [purged]
[2023-07-23 08:15:37] 2023-07-23 06:15:18,462 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2023-07-23 08:15:37] 2023-07-23 06:15:18,462 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2023-07-23 08:15:37] 2023-07-23 06:15:18,462 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2023-07-23 08:15:37] 2023-07-23 06:15:18,462 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2023-07-23 08:15:37] 2023-07-23 06:15:18,462 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2023-07-23 08:15:37] 2023-07-23 06:15:18,462 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2023-07-23 08:15:37] 2023-07-23 06:15:18,462 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2023-07-23 08:15:37] 2023-07-23 06:15:18,462 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2023-07-23 08:15:37] 2023-07-23 06:15:18,462 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2023-07-23 08:15:37] 2023-07-23 06:15:18,462 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2023-07-23 08:15:37] 2023-07-23 06:15:18,462 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2023-07-23 08:15:37] 2023-07-23 06:15:18,462 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2023-07-23 08:15:37] 2023-07-23 06:15:18,462 | INFO     | queue completed_jobids has 1 job(s)
[2023-07-23 08:15:37] 2023-07-23 06:15:18,462 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2023-07-23 08:15:37] 2023-07-23 06:15:18,462 | INFO     | queue messages had 0 job(s) [purged]
[2023-07-23 08:15:37] 2023-07-23 06:15:18,462 | INFO     | job 5911409180 has completed (purged errors)
[2023-07-23 08:15:37] 2023-07-23 06:15:18,463 | INFO     | overall cleanup function is called
[2023-07-23 08:15:37] 2023-07-23 06:15:19,466 | INFO     | --- collectZombieJob: --- 10, [3376703]
[2023-07-23 08:15:37] 2023-07-23 06:15:19,466 | INFO     | zombie collector trying to kill pid 3376703
[2023-07-23 08:15:37] 2023-07-23 06:15:19,466 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2023-07-23 08:15:37] 2023-07-23 06:15:20,469 | INFO     | collected zombie processes
[2023-07-23 08:15:37] 2023-07-23 06:15:20,469 | INFO     | will now attempt to kill all subprocesses of pid=3376703
[2023-07-23 08:15:37] 2023-07-23 06:15:20,492 | INFO     | process IDs to be killed: [3376703] (in reverse order)
[2023-07-23 08:15:37] 2023-07-23 06:15:20,506 | WARNING  | found no corresponding commands to process id(s)
[2023-07-23 08:15:37] 2023-07-23 06:15:20,506 | INFO     | Do not look for orphan processes in BOINC jobs
[2023-07-23 08:15:37] 2023-07-23 06:15:20,506 | INFO     | ready for new job
[2023-07-23 08:15:37] 2023-07-23 06:15:20,506 | INFO     | pilot has finished with previous job - re-establishing logging
[2023-07-23 08:15:37] 2023-07-23 06:15:20,507 | INFO     | *************************************
[2023-07-23 08:15:37] 2023-07-23 06:15:20,507 | INFO     | ***  PanDA Pilot version 3.6.4.7  ***
[2023-07-23 08:15:37] 2023-07-23 06:15:20,507 | INFO     | *************************************
[2023-07-23 08:15:37] 2023-07-23 06:15:20,507 | INFO     | 
[2023-07-23 08:15:37] 2023-07-23 06:15:20,507 | INFO     | pilot is running in a VM
[2023-07-23 08:15:37] 2023-07-23 06:15:20,507 | INFO     | architecture information:
[2023-07-23 08:15:37] 2023-07-23 06:15:20,507 | INFO     | executing command: cat /etc/os-release
[2023-07-23 08:15:37] 2023-07-23 06:15:20,513 | INFO     | cat /etc/os-release:
[2023-07-23 08:15:37] NAME="CentOS Linux"
[2023-07-23 08:15:37] VERSION="7 (Core)"
[2023-07-23 08:15:37] ID="centos"
[2023-07-23 08:15:37] ID_LIKE="rhel fedora"
[2023-07-23 08:15:37] VERSION_ID="7"
[2023-07-23 08:15:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2023-07-23 08:15:37] ANSI_COLOR="0;31"
[2023-07-23 08:15:37] CPE_NAME="cpe:/o:centos:centos:7"
[2023-07-23 08:15:37] HOME_URL="https://www.centos.org/"
[2023-07-23 08:15:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2023-07-23 08:15:37] 
[2023-07-23 08:15:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2023-07-23 08:15:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2023-07-23 08:15:37] REDHAT_SUPPORT_PRODUCT="centos"
[2023-07-23 08:15:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2023-07-23 08:15:37] 
[2023-07-23 08:15:37] 2023-07-23 06:15:20,513 | INFO     | *************************************
[2023-07-23 08:15:37] 2023-07-23 06:15:21,016 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2023-07-23 08:15:37] 2023-07-23 06:15:21,021 | INFO     | sufficient remaining disk space (22234005504 B)
[2023-07-23 08:15:37] 2023-07-23 06:15:21,021 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2023-07-23 08:15:37] 2023-07-23 06:15:21,021 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2023-07-23 08:15:37] 2023-07-23 06:15:21,021 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2023-07-23 08:15:37] 2023-07-23 06:15:21,022 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2023-07-23 08:15:37] 2023-07-23 06:15:21,022 | INFO     | aborting loop
[2023-07-23 08:15:37] 2023-07-23 06:15:21,022 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2023-07-23 08:15:37] 2023-07-23 06:15:21,022 | INFO     | found 0 job(s) in 20 queues
[2023-07-23 08:15:37] 2023-07-23 06:15:21,022 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2023-07-23 08:15:37] 2023-07-23 06:15:21,022 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2023-07-23 08:15:37] 2023-07-23 06:15:22,022 | INFO     | [job] retrieve thread has finished
[2023-07-23 08:15:37] 2023-07-23 06:15:22,023 | INFO     | [job] job monitor thread has finished
[2023-07-23 08:15:37] 2023-07-23 06:15:22,418 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2023-07-23 08:15:37] 2023-07-23 06:15:22,950 | INFO     | [data] control thread has finished
[2023-07-23 08:15:37] 2023-07-23 06:15:22,963 | INFO     | [job] create_data_payload thread has finished
[2023-07-23 08:15:37] 2023-07-23 06:15:22,963 | INFO     | [job] validate thread has finished
[2023-07-23 08:15:37] 2023-07-23 06:15:22,963 | INFO     | [data] copytool_in thread has finished
[2023-07-23 08:15:37] 2023-07-23 06:15:22,963 | INFO     | [payload] validate_pre thread has finished
[2023-07-23 08:15:37] 2023-07-23 06:15:22,963 | INFO     | [payload] validate_post thread has finished
[2023-07-23 08:15:37] 2023-07-23 06:15:23,029 | INFO     | [data] copytool_out thread has finished
[2023-07-23 08:15:37] 2023-07-23 06:15:23,051 | INFO     | [payload] failed_post thread has finished
[2023-07-23 08:15:37] 2023-07-23 06:15:23,173 | INFO     | [payload] control thread has finished
[2023-07-23 08:15:37] 2023-07-23 06:15:23,355 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2023-07-23 08:15:37] 2023-07-23 06:15:23,404 | INFO     | [job] control thread has finished
[2023-07-23 08:15:37] 2023-07-23 06:15:23,466 | INFO     | [payload] execute_payloads thread has finished
[2023-07-23 08:15:37] 2023-07-23 06:15:24,358 | INFO     | [job] queue monitor thread has finished
[2023-07-23 08:15:37] 2023-07-23 06:15:26,425 | INFO     | [data] queue_monitor thread has finished
[2023-07-23 08:15:37] 2023-07-23 06:15:31,118 | INFO     | job.realtimelogging is not enabled
[2023-07-23 08:15:37] 2023-07-23 06:15:32,123 | INFO     | [payload] run_realtimelog thread has finished
[2023-07-23 08:15:37] 2023-07-23 06:15:32,716 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139656478140224)>', '<ExcThread(monitor, started 139655827683072)>']
[2023-07-23 08:15:37] 2023-07-23 06:15:33,080 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2023-07-23 08:15:37] 2023-07-23 06:15:33,080 | INFO     | [monitor] control thread has ended
[2023-07-23 08:15:37] 2023-07-23 06:15:37,737 | INFO     | end of generic workflow (traces error code: 0)
[2023-07-23 08:15:37] 2023-07-23 06:15:37,737 | INFO     | traces error code: 0
[2023-07-23 08:15:37] 2023-07-23 06:15:37,737 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2023-07-23 08:15:37] 2023-07-23 06:15:37,773 [wrapper] ==== pilot stdout END ====
[2023-07-23 08:15:37] 2023-07-23 06:15:37,774 [wrapper] ==== wrapper stdout RESUME ====
[2023-07-23 08:15:37] 2023-07-23 06:15:37,774 [wrapper] pilotpid: 3369539
[2023-07-23 08:15:37] 2023-07-23 06:15:37,775 [wrapper] Pilot exit status: 0
[2023-07-23 08:15:37] 2023-07-23 06:15:37,779 [wrapper] pandaids: 5911409180
[2023-07-23 08:15:37] 2023-07-23 06:15:37,781 [wrapper] apfmon messages muted
[2023-07-23 08:15:37] 2023-07-23 06:15:37,781 [wrapper] Test setup, not cleaning
[2023-07-23 08:15:37] 2023-07-23 06:15:37,782 [wrapper] ==== wrapper stdout END ====
[2023-07-23 08:15:37] 2023-07-23 06:15:37,783 [wrapper] ==== wrapper stderr END ====
[2023-07-23 08:15:37] 2023-07-23 06:15:37,784 [wrapper] wrapperexiting ec=0, duration=1072
[2023-07-23 08:15:37] 2023-07-23 06:15:37,785 [wrapper] apfmon messages muted
[2023-07-23 08:15:37]  *** Error codes and diagnostics ***
[2023-07-23 08:15:37]     "exeErrorCode": 0,
[2023-07-23 08:15:37]     "exeErrorDiag": "",
[2023-07-23 08:15:37]     "pilotErrorCode": 0,
[2023-07-23 08:15:37]     "pilotErrorDiag": "",
[2023-07-23 08:15:37]  *** Listing of results directory ***
[2023-07-23 08:15:37] insgesamt 42996
[2023-07-23 08:15:37] -rw-r--r--. 1 boinc boinc   418016 23. Jul 07:35 pilot3.tar.gz
[2023-07-23 08:15:37] -rw-r--r--. 1 boinc boinc     4388 23. Jul 07:45 queuedata.json
[2023-07-23 08:15:37] -rwx------. 1 boinc boinc    27277 23. Jul 07:46 runpilot2-wrapper.sh
[2023-07-23 08:15:37] -rw-r--r--. 1 boinc boinc      107 23. Jul 07:57 wrapper_26015_x86_64-pc-linux-gnu
[2023-07-23 08:15:37] -rwxr-xr-x. 1 boinc boinc     7986 23. Jul 07:57 run_atlas
[2023-07-23 08:15:37] -rw-r--r--. 1 boinc boinc      112 23. Jul 07:57 job.xml
[2023-07-23 08:15:37] -rw-r--r--. 1 boinc boinc     6174 23. Jul 07:57 init_data.xml
[2023-07-23 08:15:37] -rw-r--r--. 2 boinc boinc 38288972 23. Jul 07:57 EVNT.04972714._000032.pool.root.1
[2023-07-23 08:15:37] drwxrwx--x. 2 boinc boinc       68 23. Jul 07:57 shared
[2023-07-23 08:15:37] -rw-r--r--. 2 boinc boinc   428876 23. Jul 07:57 input.tar.gz
[2023-07-23 08:15:37] -rw-r--r--. 2 boinc boinc    17596 23. Jul 07:57 start_atlas.sh
[2023-07-23 08:15:37] -rw-r--r--. 1 boinc boinc        0 23. Jul 07:57 boinc_lockfile
[2023-07-23 08:15:37] -rw-r--r--. 1 boinc boinc     2795 23. Jul 07:57 pandaJob.out
[2023-07-23 08:15:37] -rw-------. 1 boinc boinc      424 23. Jul 07:57 setup.sh.local
[2023-07-23 08:15:37] -rw-------. 1 boinc boinc  1015272 23. Jul 07:57 agis_schedconf.cvmfs.json
[2023-07-23 08:15:37] -rw-------. 1 boinc boinc  1370854 23. Jul 07:58 cric_ddmendpoints.json
[2023-07-23 08:15:37] drwx------. 4 boinc boinc     4096 23. Jul 07:59 pilot3
[2023-07-23 08:15:37] -rw-------. 1 boinc boinc  1653394 23. Jul 08:08 Hits.hc_20271351.BOINC-TEST.3aba06fb-8555-4293-8f66-cc7cec3bc6b5_90753.HITS.pool.root
[2023-07-23 08:15:37] -rw-------. 1 boinc boinc     1002 23. Jul 08:08 memory_monitor_summary.json
[2023-07-23 08:15:37] -rw-r--r--. 1 boinc boinc      532 23. Jul 08:08 boinc_task_state.xml
[2023-07-23 08:15:37] -rw-------. 1 boinc boinc   154422 23. Jul 08:11 3aba06fb-8555-4293-8f66-cc7cec3bc6b5_90753.job.log.tgz
[2023-07-23 08:15:37] -rw-------. 1 boinc boinc     6667 23. Jul 08:15 heartbeat.json
[2023-07-23 08:15:37] -rw-r--r--. 1 boinc boinc       25 23. Jul 08:15 wrapper_checkpoint.txt
[2023-07-23 08:15:37] -rw-r--r--. 1 boinc boinc     8192 23. Jul 08:15 boinc_mmap_file
[2023-07-23 08:15:37] -rw-------. 1 boinc boinc     4154 23. Jul 08:15 pilotlog.txt
[2023-07-23 08:15:37] -rw-------. 1 boinc boinc   166553 23. Jul 08:15 3aba06fb-8555-4293-8f66-cc7cec3bc6b5_90753.job.log
[2023-07-23 08:15:37] -rw-r--r--. 1 boinc boinc      680 23. Jul 08:15 runtime_log
[2023-07-23 08:15:37] -rw-------. 1 boinc boinc   337920 23. Jul 08:15 result.tar.gz
[2023-07-23 08:15:37] -rw-------. 1 boinc boinc      510 23. Jul 08:15 output.list
[2023-07-23 08:15:37] -rw-r--r--. 1 boinc boinc    22403 23. Jul 08:15 stderr.txt
[2023-07-23 08:15:37] -rw-r--r--. 1 boinc boinc    11517 23. Jul 08:15 runtime_log.err
[2023-07-23 08:15:37] -rw-------. 1 boinc boinc      629 23. Jul 08:15 012NDmT6gh3n7Olcko1bjSoqABFKDmABFKDm7AsVDmWqNKDm5uULym.diag
[2023-07-23 08:15:37] HITS file was successfully produced:
[2023-07-23 08:15:37] -rw-------. 1 boinc boinc 1653394 23. Jul 08:08 shared/HITS.pool.root.1
[2023-07-23 08:15:37]  *** Contents of shared directory: ***
[2023-07-23 08:15:37] insgesamt 39780
[2023-07-23 08:15:37] -rw-r--r--. 2 boinc boinc 38288972 23. Jul 07:57 ATLAS.root_0
[2023-07-23 08:15:37] -rw-r--r--. 2 boinc boinc   428876 23. Jul 07:57 input.tar.gz
[2023-07-23 08:15:37] -rw-r--r--. 2 boinc boinc    17596 23. Jul 07:57 start_atlas.sh
[2023-07-23 08:15:37] -rw-------. 1 boinc boinc  1653394 23. Jul 08:08 HITS.pool.root.1
[2023-07-23 08:15:37] -rw-------. 1 boinc boinc   337920 23. Jul 08:15 result.tar.gz
08:15:39 (3366393): run_atlas exited; CPU time 336.889091
08:15:39 (3366393): called boinc_finish(0)

</stderr_txt>
]]>


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