Name 06QLDmakQi3n7Olcko1bjSoqABFKDmABFKDm7AsVDmkyNKDm7Lfqen_0
Workunit 2320684
Created 25 Jul 2023, 6:31:02 UTC
Sent 25 Jul 2023, 6:33:44 UTC
Report deadline 1 Aug 2023, 6:33:44 UTC
Received 25 Jul 2023, 7:04:51 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 4721
Run time 13 min 20 sec
CPU time 1 min 53 sec
Validate state Valid
Credit 15.63
Device peak FLOPS 6.59 GFLOPS
Application version ATLAS Simulation v3.01 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 2.69 GB
Peak swap size 3.11 GB
Peak disk usage 36.65 MB

Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:51:23 (897508): wrapper (7.7.26015): starting
08:51:23 (897508): wrapper: running run_atlas (--nthreads 1)
[2023-07-25 08:51:23] Arguments: --nthreads 1
[2023-07-25 08:51:23] Threads: 1
[2023-07-25 08:51:23] Checking for CVMFS
[2023-07-25 08:51:25] Probing /cvmfs/atlas.cern.ch... OK
[2023-07-25 08:51:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2023-07-25 08:51:27] Running cvmfs_config stat atlas.cern.ch
[2023-07-25 08:51:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2023-07-25 08:51:28] 2.10.1.0 750912 121 44368 121686 1 73 3907049 4096000 0 130560 1 560363 99.999 2575 8 http://s1asgc-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://131.225.188.246:3126 0
[2023-07-25 08:51:28] CVMFS is ok
[2023-07-25 08:51:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2023-07-25 08:51:28] Checking for apptainer binary...
[2023-07-25 08:51:28] Using apptainer found in PATH at /usr/bin/apptainer
[2023-07-25 08:51:28] Running /usr/bin/apptainer --version
[2023-07-25 08:51:28] apptainer version 1.1.9-1.el9
[2023-07-25 08:51:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2023-07-25 08:51:28] P620-CentOS9
[2023-07-25 08:51:28] apptainer works
[2023-07-25 08:51:28] Starting ATLAS job with PandaID=5913051467
[2023-07-25 08:51:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2023-07-25 09:04:41]  *** The last 200 lines of the pilot log: ***
[2023-07-25 09:04:41] 2023-07-25 07:03:49,319 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2023-07-25 09:04:41] 2023-07-25 07:03:49,325 | INFO     | sufficient remaining disk space (21566062592 B)
[2023-07-25 09:04:41] 2023-07-25 07:03:49,326 | INFO     | work directory size check will use 61362667520 B as a max limit (10% grace limit added)
[2023-07-25 09:04:41] 2023-07-25 07:03:49,326 | INFO     | size of work directory /var/lib/boinc/slots/9/PanDA_Pilot-5913051467: 1069886 B (within 61362667520 B limit)
[2023-07-25 09:04:41] 2023-07-25 07:03:49,326 | INFO     | pfn file=/var/lib/boinc/slots/9/PanDA_Pilot-5913051467/output.1.c74a8f43-417d-431a-8b32-0ebffc102a31_83669.pool.root does not exist (skip from workdir size calcula
[2023-07-25 09:04:41] 2023-07-25 07:03:49,326 | INFO     | total size of present files: 0 B (workdir size: 1069886 B)
[2023-07-25 09:04:41] 2023-07-25 07:03:49,326 | INFO     | output file size check: skipping output file /var/lib/boinc/slots/9/PanDA_Pilot-5913051467/output.1.c74a8f43-417d-431a-8b32-0ebffc102a31_83669.pool.root since it d
[2023-07-25 09:04:41] 2023-07-25 07:03:49,345 | INFO     | number of running child processes to parent process 907199: 1
[2023-07-25 09:04:41] 2023-07-25 07:03:49,345 | INFO     | maximum number of monitored processes: 5
[2023-07-25 09:04:41] 2023-07-25 07:03:51,848 | INFO     | monitor loop #149: job 0:5913051467 is in state 'stageout'
[2023-07-25 09:04:41] 2023-07-25 07:03:51,869 | INFO     | number of running child processes to parent process 907199: 1
[2023-07-25 09:04:41] 2023-07-25 07:03:51,869 | INFO     | maximum number of monitored processes: 5
[2023-07-25 09:04:41] 2023-07-25 07:03:54,372 | INFO     | monitor loop #150: job 0:5913051467 is in state 'stageout'
[2023-07-25 09:04:41] 2023-07-25 07:03:54,393 | INFO     | number of running child processes to parent process 907199: 1
[2023-07-25 09:04:41] 2023-07-25 07:03:54,394 | INFO     | maximum number of monitored processes: 5
[2023-07-25 09:04:41] 2023-07-25 07:03:56,897 | INFO     | monitor loop #151: job 0:5913051467 is in state 'stageout'
[2023-07-25 09:04:41] 2023-07-25 07:03:56,917 | INFO     | number of running child processes to parent process 907199: 1
[2023-07-25 09:04:41] 2023-07-25 07:03:56,918 | INFO     | maximum number of monitored processes: 5
[2023-07-25 09:04:41] 2023-07-25 07:03:59,419 | INFO     | monitor loop #152: job 0:5913051467 is in state 'stageout'
[2023-07-25 09:04:41] 2023-07-25 07:03:59,440 | INFO     | number of running child processes to parent process 907199: 1
[2023-07-25 09:04:41] 2023-07-25 07:03:59,441 | INFO     | maximum number of monitored processes: 5
[2023-07-25 09:04:41] 2023-07-25 07:04:01,944 | INFO     | monitor loop #153: job 0:5913051467 is in state 'stageout'
[2023-07-25 09:04:41] 2023-07-25 07:04:01,965 | INFO     | number of running child processes to parent process 907199: 1
[2023-07-25 09:04:41] 2023-07-25 07:04:01,966 | INFO     | maximum number of monitored processes: 5
[2023-07-25 09:04:41] 2023-07-25 07:04:04,468 | INFO     | monitor loop #154: job 0:5913051467 is in state 'stageout'
[2023-07-25 09:04:41] 2023-07-25 07:04:04,490 | INFO     | number of running child processes to parent process 907199: 1
[2023-07-25 09:04:41] 2023-07-25 07:04:04,490 | INFO     | maximum number of monitored processes: 5
[2023-07-25 09:04:41] 2023-07-25 07:04:05,578 | INFO     | [attempt=3/3] loading data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json
[2023-07-25 09:04:41] 2023-07-25 07:04:05,671 | WARNING  | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: 
[2023-07-25 09:04:41] 2023-07-25 07:04:05,671 | WARNING  | cache file=/var/lib/boinc/slots/9/agis_ddmendpoints.agis.ALL.json is not available: [Errno 2] No such file or directory: '/var/lib/boinc/slots/9/agis_ddmendpoints.
[2023-07-25 09:04:41] 2023-07-25 07:04:05,698 | INFO     | transferring file c74a8f43-417d-431a-8b32-0ebffc102a31_83669.1.job.log.tgz from /var/lib/boinc/slots/9/PanDA_Pilot-5913051467/c74a8f43-417d-431a-8b32-0ebffc102a31_
[2023-07-25 09:04:41] 2023-07-25 07:04:05,699 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/9/PanDA_Pilot-5913051467/c74a8f43-417d-431a-8b32-0ebffc102a31_83669.1.job.log.tgz /var/lib/boinc/slots/9/c7
[2023-07-25 09:04:41] 2023-07-25 07:04:05,706 | INFO     | Adding to output.list: c74a8f43-417d-431a-8b32-0ebffc102a31_83669.1.job.log.tgz davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/5b/98/c74a8f43-417d-
[2023-07-25 09:04:41] 2023-07-25 07:04:05,706 | INFO     | summary of transferred files:
[2023-07-25 09:04:41] 2023-07-25 07:04:05,706 | INFO     |  -- lfn=c74a8f43-417d-431a-8b32-0ebffc102a31_83669.1.job.log.tgz, status_code=0, status=transferred
[2023-07-25 09:04:41] 2023-07-25 07:04:05,706 | INFO     | stage-out finished correctly
[2023-07-25 09:04:41] 2023-07-25 07:04:06,993 | INFO     | monitor loop #155: job 0:5913051467 is in state 'finished'
[2023-07-25 09:04:41] 2023-07-25 07:04:06,994 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-07-25 09:04:41] 2023-07-25 07:04:08,617 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2023-07-25 09:04:41] 2023-07-25 07:04:09,496 | INFO     | monitor loop #156: job 0:5913051467 is in state 'finished'
[2023-07-25 09:04:41] 2023-07-25 07:04:09,496 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-07-25 09:04:41] 2023-07-25 07:04:10,784 | INFO     | job 5913051467 has state=finished
[2023-07-25 09:04:41] 2023-07-25 07:04:10,784 | INFO     | preparing for final server update for job 5913051467 in state='finished'
[2023-07-25 09:04:41] 2023-07-25 07:04:10,784 | INFO     | this job has now completed (state=finished)
[2023-07-25 09:04:41] 2023-07-25 07:04:10,784 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2023-07-25 09:04:41] 2023-07-25 07:04:10,784 | INFO     | job 5913051467 has finished - writing final server update
[2023-07-25 09:04:41] 2023-07-25 07:04:10,784 | WARNING  | wrong length of table data, x=[1690268061.0, 1690268122.0, 1690268183.0, 1690268244.0, 1690268305.0], y=[1671.0, 888116.0, 1025216.0, 1596612.0, 2925844.0] (must b
[2023-07-25 09:04:41] 2023-07-25 07:04:10,785 | INFO     | total number of processed events: 2 (read)
[2023-07-25 09:04:41] 2023-07-25 07:04:10,785 | INFO     | executing command: lscpu
[2023-07-25 09:04:41] 2023-07-25 07:04:10,792 | INFO     | found 1 cores (1 cores per socket, 1 sockets)
[2023-07-25 09:04:41] 2023-07-25 07:04:10,792 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2023-07-25 09:04:41] 2023-07-25 07:04:10,800 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2023-07-25 09:04:41] 2023-07-25 07:04:11,999 | INFO     | monitor loop #157: job 0:5913051467 is in state 'finished'
[2023-07-25 09:04:41] 2023-07-25 07:04:11,999 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-07-25 09:04:41] 2023-07-25 07:04:14,502 | INFO     | monitor loop #158: job 0:5913051467 is in state 'finished'
[2023-07-25 09:04:41] 2023-07-25 07:04:14,503 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-07-25 09:04:41] 2023-07-25 07:04:17,007 | INFO     | monitor loop #159: job 0:5913051467 is in state 'finished'
[2023-07-25 09:04:41] 2023-07-25 07:04:17,007 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-07-25 09:04:41] 2023-07-25 07:04:19,510 | INFO     | monitor loop #160: job 0:5913051467 is in state 'finished'
[2023-07-25 09:04:41] 2023-07-25 07:04:19,510 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-07-25 09:04:41] 2023-07-25 07:04:20,064 | INFO     | CPU arch script returned: x86-64-v2
[2023-07-25 09:04:41] 2023-07-25 07:04:20,064 | INFO     | using path: /var/lib/boinc/slots/9/PanDA_Pilot-5913051467/memory_monitor_summary.json (trf name=prmon)
[2023-07-25 09:04:41] 2023-07-25 07:04:20,064 | INFO     | extracted standard info from prmon json
[2023-07-25 09:04:41] 2023-07-25 07:04:20,064 | INFO     | extracted standard memory fields from prmon json
[2023-07-25 09:04:41] 2023-07-25 07:04:20,064 | INFO     | ..............................
[2023-07-25 09:04:41] 2023-07-25 07:04:20,064 | INFO     | . Timing measurements:
[2023-07-25 09:04:41] 2023-07-25 07:04:20,065 | INFO     | . get job = 49 s
[2023-07-25 09:04:41] 2023-07-25 07:04:20,065 | INFO     | . initial setup = 38 s
[2023-07-25 09:04:41] 2023-07-25 07:04:20,065 | INFO     | . payload setup = 1 s
[2023-07-25 09:04:41] 2023-07-25 07:04:20,065 | INFO     | . stage-in = 66 s
[2023-07-25 09:04:41] 2023-07-25 07:04:20,065 | INFO     | . payload execution = 257 s
[2023-07-25 09:04:41] 2023-07-25 07:04:20,065 | INFO     | . stage-out = 328 s
[2023-07-25 09:04:41] 2023-07-25 07:04:20,065 | INFO     | ..............................
[2023-07-25 09:04:41] 2023-07-25 07:04:20,110 | INFO     | 
[2023-07-25 09:04:41] 2023-07-25 07:04:20,110 | INFO     | job summary report
[2023-07-25 09:04:41] 2023-07-25 07:04:20,110 | INFO     | --------------------------------------------------
[2023-07-25 09:04:41] 2023-07-25 07:04:20,110 | INFO     | PanDA job id: 5913051467
[2023-07-25 09:04:41] 2023-07-25 07:04:20,110 | INFO     | task id: NULL
[2023-07-25 09:04:41] 2023-07-25 07:04:20,110 | INFO     | errors: (none)
[2023-07-25 09:04:41] 2023-07-25 07:04:20,110 | INFO     | status: LOG_TRANSFER = DONE 
[2023-07-25 09:04:41] 2023-07-25 07:04:20,110 | INFO     | pilot state: finished 
[2023-07-25 09:04:41] 2023-07-25 07:04:20,110 | INFO     | transexitcode: 0
[2023-07-25 09:04:41] 2023-07-25 07:04:20,110 | INFO     | exeerrorcode: 0
[2023-07-25 09:04:41] 2023-07-25 07:04:20,110 | INFO     | exeerrordiag: 
[2023-07-25 09:04:41] 2023-07-25 07:04:20,110 | INFO     | exitcode: 0
[2023-07-25 09:04:41] 2023-07-25 07:04:20,110 | INFO     | exitmsg: OK
[2023-07-25 09:04:41] 2023-07-25 07:04:20,110 | INFO     | cpuconsumptiontime: 115 s
[2023-07-25 09:04:41] 2023-07-25 07:04:20,110 | INFO     | nevents: 2
[2023-07-25 09:04:41] 2023-07-25 07:04:20,110 | INFO     | neventsw: 0
[2023-07-25 09:04:41] 2023-07-25 07:04:20,110 | INFO     | pid: 907199
[2023-07-25 09:04:41] 2023-07-25 07:04:20,110 | INFO     | pgrp: 907199
[2023-07-25 09:04:41] 2023-07-25 07:04:20,110 | INFO     | corecount: 1
[2023-07-25 09:04:41] 2023-07-25 07:04:20,110 | INFO     | event service: False
[2023-07-25 09:04:41] 2023-07-25 07:04:20,110 | INFO     | sizes: {0: 2463407, 11: 2463553, 21: 2463581, 32: 2463609, 43: 2463637, 53: 2463665, 64: 2463821, 69: 2463937, 74: 2463965, 262: 2486092, 590: 2495434, 593: 249577
[2023-07-25 09:04:41] 2023-07-25 07:04:20,110 | INFO     | --------------------------------------------------
[2023-07-25 09:04:41] 2023-07-25 07:04:20,111 | INFO     | 
[2023-07-25 09:04:41] 2023-07-25 07:04:20,111 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2023-07-25 09:04:41] 2023-07-25 07:04:20,118 | INFO     | queue jobs had 0 job(s) [purged]
[2023-07-25 09:04:41] 2023-07-25 07:04:20,118 | INFO     | queue payloads had 0 job(s) [purged]
[2023-07-25 09:04:41] 2023-07-25 07:04:20,118 | INFO     | queue data_in had 0 job(s) [purged]
[2023-07-25 09:04:41] 2023-07-25 07:04:20,118 | INFO     | queue data_out had 0 job(s) [purged]
[2023-07-25 09:04:41] 2023-07-25 07:04:20,118 | INFO     | queue current_data_in had 0 job(s) [purged]
[2023-07-25 09:04:41] 2023-07-25 07:04:20,118 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2023-07-25 09:04:41] 2023-07-25 07:04:20,118 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2023-07-25 09:04:41] 2023-07-25 07:04:20,118 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2023-07-25 09:04:41] 2023-07-25 07:04:20,118 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2023-07-25 09:04:41] 2023-07-25 07:04:20,118 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2023-07-25 09:04:41] 2023-07-25 07:04:20,118 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2023-07-25 09:04:41] 2023-07-25 07:04:20,118 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2023-07-25 09:04:41] 2023-07-25 07:04:20,118 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2023-07-25 09:04:41] 2023-07-25 07:04:20,118 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2023-07-25 09:04:41] 2023-07-25 07:04:20,118 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2023-07-25 09:04:41] 2023-07-25 07:04:20,119 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2023-07-25 09:04:41] 2023-07-25 07:04:20,119 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2023-07-25 09:04:41] 2023-07-25 07:04:20,119 | INFO     | queue completed_jobids has 1 job(s)
[2023-07-25 09:04:41] 2023-07-25 07:04:20,119 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2023-07-25 09:04:41] 2023-07-25 07:04:20,119 | INFO     | queue messages had 0 job(s) [purged]
[2023-07-25 09:04:41] 2023-07-25 07:04:20,119 | INFO     | job 5913051467 has completed (purged errors)
[2023-07-25 09:04:41] 2023-07-25 07:04:20,119 | INFO     | overall cleanup function is called
[2023-07-25 09:04:41] 2023-07-25 07:04:21,121 | INFO     | --- collectZombieJob: --- 10, [907199]
[2023-07-25 09:04:41] 2023-07-25 07:04:21,121 | INFO     | zombie collector trying to kill pid 907199
[2023-07-25 09:04:41] 2023-07-25 07:04:21,121 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2023-07-25 09:04:41] 2023-07-25 07:04:22,124 | INFO     | collected zombie processes
[2023-07-25 09:04:41] 2023-07-25 07:04:22,124 | INFO     | will now attempt to kill all subprocesses of pid=907199
[2023-07-25 09:04:41] 2023-07-25 07:04:22,150 | INFO     | process IDs to be killed: [907199] (in reverse order)
[2023-07-25 09:04:41] 2023-07-25 07:04:22,163 | WARNING  | found no corresponding commands to process id(s)
[2023-07-25 09:04:41] 2023-07-25 07:04:22,163 | INFO     | Do not look for orphan processes in BOINC jobs
[2023-07-25 09:04:41] 2023-07-25 07:04:22,163 | INFO     | ready for new job
[2023-07-25 09:04:41] 2023-07-25 07:04:22,163 | INFO     | pilot has finished with previous job - re-establishing logging
[2023-07-25 09:04:41] 2023-07-25 07:04:22,164 | INFO     | *************************************
[2023-07-25 09:04:41] 2023-07-25 07:04:22,164 | INFO     | ***  PanDA Pilot version 3.6.4.7  ***
[2023-07-25 09:04:41] 2023-07-25 07:04:22,164 | INFO     | *************************************
[2023-07-25 09:04:41] 2023-07-25 07:04:22,164 | INFO     | 
[2023-07-25 09:04:41] 2023-07-25 07:04:22,164 | INFO     | pilot is running in a VM
[2023-07-25 09:04:41] 2023-07-25 07:04:22,164 | INFO     | architecture information:
[2023-07-25 09:04:41] 2023-07-25 07:04:22,164 | INFO     | executing command: cat /etc/os-release
[2023-07-25 09:04:41] 2023-07-25 07:04:22,170 | INFO     | cat /etc/os-release:
[2023-07-25 09:04:41] NAME="CentOS Linux"
[2023-07-25 09:04:41] VERSION="7 (Core)"
[2023-07-25 09:04:41] ID="centos"
[2023-07-25 09:04:41] ID_LIKE="rhel fedora"
[2023-07-25 09:04:41] VERSION_ID="7"
[2023-07-25 09:04:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2023-07-25 09:04:41] ANSI_COLOR="0;31"
[2023-07-25 09:04:41] CPE_NAME="cpe:/o:centos:centos:7"
[2023-07-25 09:04:41] HOME_URL="https://www.centos.org/"
[2023-07-25 09:04:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2023-07-25 09:04:41] 
[2023-07-25 09:04:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2023-07-25 09:04:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2023-07-25 09:04:41] REDHAT_SUPPORT_PRODUCT="centos"
[2023-07-25 09:04:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2023-07-25 09:04:41] 
[2023-07-25 09:04:41] 2023-07-25 07:04:22,170 | INFO     | *************************************
[2023-07-25 09:04:41] 2023-07-25 07:04:22,672 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2023-07-25 09:04:41] 2023-07-25 07:04:22,679 | INFO     | sufficient remaining disk space (21567111168 B)
[2023-07-25 09:04:41] 2023-07-25 07:04:22,679 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2023-07-25 09:04:41] 2023-07-25 07:04:22,679 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2023-07-25 09:04:41] 2023-07-25 07:04:23,015 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2023-07-25 09:04:41] 2023-07-25 07:04:23,015 | INFO     | aborting loop
[2023-07-25 09:04:41] 2023-07-25 07:04:23,475 | INFO     | found 0 job(s) in 20 queues
[2023-07-25 09:04:41] 2023-07-25 07:04:23,475 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2023-07-25 09:04:41] 2023-07-25 07:04:23,475 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2023-07-25 09:04:41] 2023-07-25 07:04:23,675 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2023-07-25 09:04:41] 2023-07-25 07:04:23,684 | INFO     | [job] retrieve thread has finished
[2023-07-25 09:04:41] 2023-07-25 07:04:23,728 | INFO     | [job] validate thread has finished
[2023-07-25 09:04:41] 2023-07-25 07:04:23,769 | INFO     | [job] create_data_payload thread has finished
[2023-07-25 09:04:41] 2023-07-25 07:04:23,780 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2023-07-25 09:04:41] 2023-07-25 07:04:23,834 | INFO     | [payload] validate_pre thread has finished
[2023-07-25 09:04:41] 2023-07-25 07:04:24,017 | INFO     | [job] job monitor thread has finished
[2023-07-25 09:04:41] 2023-07-25 07:04:24,410 | INFO     | [payload] validate_post thread has finished
[2023-07-25 09:04:41] 2023-07-25 07:04:24,456 | INFO     | [data] control thread has finished
[2023-07-25 09:04:41] 2023-07-25 07:04:24,486 | INFO     | [payload] failed_post thread has finished
[2023-07-25 09:04:41] 2023-07-25 07:04:24,729 | INFO     | [data] copytool_in thread has finished
[2023-07-25 09:04:41] 2023-07-25 07:04:24,978 | INFO     | [payload] control thread has finished
[2023-07-25 09:04:41] 2023-07-25 07:04:25,118 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2023-07-25 09:04:41] 2023-07-25 07:04:25,164 | INFO     | [payload] execute_payloads thread has finished
[2023-07-25 09:04:41] 2023-07-25 07:04:25,219 | INFO     | [job] control thread has finished
[2023-07-25 09:04:41] 2023-07-25 07:04:25,786 | INFO     | [data] copytool_out thread has finished
[2023-07-25 09:04:41] 2023-07-25 07:04:26,121 | INFO     | [job] queue monitor thread has finished
[2023-07-25 09:04:41] 2023-07-25 07:04:27,679 | INFO     | [data] queue_monitor thread has finished
[2023-07-25 09:04:41] 2023-07-25 07:04:33,618 | INFO     | job.realtimelogging is not enabled
[2023-07-25 09:04:41] 2023-07-25 07:04:34,624 | INFO     | [payload] run_realtimelog thread has finished
[2023-07-25 09:04:41] 2023-07-25 07:04:35,965 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140148689930048)>', '<ExcThread(monitor, started 140148171847424)>']
[2023-07-25 09:04:41] 2023-07-25 07:04:36,531 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2023-07-25 09:04:41] 2023-07-25 07:04:36,531 | INFO     | [monitor] control thread has ended
[2023-07-25 09:04:41] 2023-07-25 07:04:40,988 | INFO     | end of generic workflow (traces error code: 0)
[2023-07-25 09:04:41] 2023-07-25 07:04:40,988 | INFO     | traces error code: 0
[2023-07-25 09:04:41] 2023-07-25 07:04:40,988 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2023-07-25 09:04:41] 2023-07-25 07:04:41,021 [wrapper] ==== pilot stdout END ====
[2023-07-25 09:04:41] 2023-07-25 07:04:41,022 [wrapper] ==== wrapper stdout RESUME ====
[2023-07-25 09:04:41] 2023-07-25 07:04:41,023 [wrapper] pilotpid: 900710
[2023-07-25 09:04:41] 2023-07-25 07:04:41,023 [wrapper] Pilot exit status: 0
[2023-07-25 09:04:41] 2023-07-25 07:04:41,028 [wrapper] pandaids: 5913051467
[2023-07-25 09:04:41] 2023-07-25 07:04:41,030 [wrapper] apfmon messages muted
[2023-07-25 09:04:41] 2023-07-25 07:04:41,030 [wrapper] Test setup, not cleaning
[2023-07-25 09:04:41] 2023-07-25 07:04:41,033 [wrapper] ==== wrapper stdout END ====
[2023-07-25 09:04:41] 2023-07-25 07:04:41,065 [wrapper] ==== wrapper stderr END ====
[2023-07-25 09:04:41] 2023-07-25 07:04:41,067 [wrapper] wrapperexiting ec=0, duration=793
[2023-07-25 09:04:41] 2023-07-25 07:04:41,067 [wrapper] apfmon messages muted
[2023-07-25 09:04:41]  *** Error codes and diagnostics ***
[2023-07-25 09:04:41]     "exeErrorCode": 0,
[2023-07-25 09:04:41]     "exeErrorDiag": "",
[2023-07-25 09:04:41]     "pilotErrorCode": 0,
[2023-07-25 09:04:41]     "pilotErrorDiag": "",
[2023-07-25 09:04:41]  *** Listing of results directory ***
[2023-07-25 09:04:41] insgesamt 44480
[2023-07-25 09:04:41] -rw-r--r--. 1 boinc boinc   418016 25. Jul 07:36 pilot3.tar.gz
[2023-07-25 09:04:41] -rwx------. 1 boinc boinc    27277 25. Jul 08:30 runpilot2-wrapper.sh
[2023-07-25 09:04:41] -rw-r--r--. 1 boinc boinc     4388 25. Jul 08:30 queuedata.json
[2023-07-25 09:04:41] -rw-r--r--. 1 boinc boinc      107 25. Jul 08:51 wrapper_26015_x86_64-pc-linux-gnu
[2023-07-25 09:04:41] -rwxr-xr-x. 1 boinc boinc     7986 25. Jul 08:51 run_atlas
[2023-07-25 09:04:41] -rw-r--r--. 1 boinc boinc      112 25. Jul 08:51 job.xml
[2023-07-25 09:04:41] -rw-r--r--. 2 boinc boinc    17604 25. Jul 08:51 start_atlas.sh
[2023-07-25 09:04:41] drwxrwx--x. 2 boinc boinc       68 25. Jul 08:51 shared
[2023-07-25 09:04:41] -rw-r--r--. 2 boinc boinc   428806 25. Jul 08:51 input.tar.gz
[2023-07-25 09:04:41] -rw-r--r--. 1 boinc boinc     6184 25. Jul 08:51 init_data.xml
[2023-07-25 09:04:41] -rw-r--r--. 2 boinc boinc 37965264 25. Jul 08:51 EVNT.04972714._000027.pool.root.1
[2023-07-25 09:04:41] -rw-r--r--. 1 boinc boinc        0 25. Jul 08:51 boinc_lockfile
[2023-07-25 09:04:41] -rw-r--r--. 1 boinc boinc     2680 25. Jul 08:51 pandaJob.out
[2023-07-25 09:04:41] -rw-------. 1 boinc boinc      424 25. Jul 08:51 setup.sh.local
[2023-07-25 09:04:41] -rw-------. 1 boinc boinc  1012851 25. Jul 08:51 agis_schedconf.cvmfs.json
[2023-07-25 09:04:41] -rw-------. 1 boinc boinc  1374751 25. Jul 08:52 cric_ddmendpoints.json
[2023-07-25 09:04:41] drwx------. 4 boinc boinc     4096 25. Jul 08:52 pilot3
[2023-07-25 09:04:41] -rw-------. 1 boinc boinc  1760798 25. Jul 08:58 output.1.c74a8f43-417d-431a-8b32-0ebffc102a31_83669.pool.root
[2023-07-25 09:04:41] -rw-------. 1 boinc boinc     1004 25. Jul 08:58 memory_monitor_summary.json
[2023-07-25 09:04:41] -rw-r--r--. 1 boinc boinc      531 25. Jul 08:58 boinc_task_state.xml
[2023-07-25 09:04:41] -rw-------. 1 boinc boinc   169140 25. Jul 09:01 c74a8f43-417d-431a-8b32-0ebffc102a31_83669.1.job.log.tgz
[2023-07-25 09:04:41] -rw-------. 1 boinc boinc     7501 25. Jul 09:04 heartbeat.json
[2023-07-25 09:04:41] -rw-r--r--. 1 boinc boinc     8192 25. Jul 09:04 boinc_mmap_file
[2023-07-25 09:04:41] -rw-r--r--. 1 boinc boinc       23 25. Jul 09:04 wrapper_checkpoint.txt
[2023-07-25 09:04:41] -rw-------. 1 boinc boinc     4031 25. Jul 09:04 pilotlog.txt
[2023-07-25 09:04:41] -rw-------. 1 boinc boinc   138632 25. Jul 09:04 c74a8f43-417d-431a-8b32-0ebffc102a31_83669.1.job.log
[2023-07-25 09:04:41] -rw-------. 1 boinc boinc      464 25. Jul 09:04 output.list
[2023-07-25 09:04:41] -rw-r--r--. 1 boinc boinc      748 25. Jul 09:04 runtime_log
[2023-07-25 09:04:41] -rw-------. 1 boinc boinc  2088960 25. Jul 09:04 result.tar.gz
[2023-07-25 09:04:41] -rw-r--r--. 1 boinc boinc    11841 25. Jul 09:04 runtime_log.err
[2023-07-25 09:04:41] -rw-------. 1 boinc boinc      627 25. Jul 09:04 06QLDmakQi3n7Olcko1bjSoqABFKDmABFKDm7AsVDmkyNKDm7Lfqen.diag
[2023-07-25 09:04:41] -rw-r--r--. 1 boinc boinc    22860 25. Jul 09:04 stderr.txt
[2023-07-25 09:04:41] HITS file was successfully produced:
[2023-07-25 09:04:41] -rw-------. 1 boinc boinc 1760798 25. Jul 08:58 shared/HITS.pool.root.1
[2023-07-25 09:04:41]  *** Contents of shared directory: ***
[2023-07-25 09:04:41] insgesamt 41276
[2023-07-25 09:04:41] -rw-r--r--. 2 boinc boinc    17604 25. Jul 08:51 start_atlas.sh
[2023-07-25 09:04:41] -rw-r--r--. 2 boinc boinc   428806 25. Jul 08:51 input.tar.gz
[2023-07-25 09:04:41] -rw-r--r--. 2 boinc boinc 37965264 25. Jul 08:51 ATLAS.root_0
[2023-07-25 09:04:41] -rw-------. 1 boinc boinc  1760798 25. Jul 08:58 HITS.pool.root.1
[2023-07-25 09:04:41] -rw-------. 1 boinc boinc  2088960 25. Jul 09:04 result.tar.gz
09:04:42 (897508): run_atlas exited; CPU time 113.700437
09:04:42 (897508): called boinc_finish(0)

</stderr_txt>
]]>


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