Name PI0KDmKh5i3n7Olcko1bjSoqABFKDmABFKDm7AsVDmg6NKDm5CgfIo_0
Workunit 2321175
Created 27 Jul 2023, 2:14:22 UTC
Sent 27 Jul 2023, 2:16:21 UTC
Report deadline 3 Aug 2023, 2:16:21 UTC
Received 27 Jul 2023, 2:47:01 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 1498
Run time 28 min 24 sec
CPU time 14 min 4 sec
Validate state Valid
Credit 18.63
Device peak FLOPS 13.05 GFLOPS
Application version ATLAS Simulation v3.01 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 1.51 GB
Peak swap size 4.81 GB
Peak disk usage 81.90 MB

Stderr output

<core_client_version>7.4.25</core_client_version>
<![CDATA[
<stderr_txt>
03:17:28 (5512): wrapper (7.7.26015): starting
03:17:28 (5512): wrapper: running run_atlas (--nthreads 4)
[2023-07-27 03:17:28] Arguments: --nthreads 4
[2023-07-27 03:17:28] Threads: 4
[2023-07-27 03:17:28] Checking for CVMFS
[2023-07-27 03:17:31] Probing /cvmfs/atlas.cern.ch... OK
[2023-07-27 03:17:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2023-07-27 03:17:37] Running cvmfs_config stat atlas.cern.ch
[2023-07-27 03:17:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2023-07-27 03:17:37] 2.9.0.0 5656 0 23072 121760 3 1 3783840 4194304 0 130560 0 0 0.000 829 349 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.100.152:3128 1
[2023-07-27 03:17:37] CVMFS is ok
[2023-07-27 03:17:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2023-07-27 03:17:37] Checking for apptainer binary...
[2023-07-27 03:17:37] Using apptainer found in PATH at /usr/bin/apptainer
[2023-07-27 03:17:37] Running /usr/bin/apptainer --version
[2023-07-27 03:17:37] apptainer version 1.0.3
[2023-07-27 03:17:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2023-07-27 03:17:38] TeeC16
[2023-07-27 03:17:38] apptainer works
[2023-07-27 03:17:38] Set ATHENA_PROC_NUMBER=4
[2023-07-27 03:17:38] Set ATHENA_CORE_NUMBER=4
[2023-07-27 03:17:38] Starting ATLAS job with PandaID=5914558916
[2023-07-27 03:17:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/m/BOINC/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2023-07-27 03:45:50]  *** The last 200 lines of the pilot log: ***
[2023-07-27 03:45:50] 2023-07-27 02:44:52,624 | INFO     | maximum number of monitored processes: 5
[2023-07-27 03:45:50] 2023-07-27 02:44:55,127 | INFO     | monitor loop #222: job 0:5914558916 is in state 'stageout'
[2023-07-27 03:45:50] 2023-07-27 02:44:55,169 | INFO     | number of running child processes to parent process 16609: 1
[2023-07-27 03:45:50] 2023-07-27 02:44:55,170 | INFO     | maximum number of monitored processes: 5
[2023-07-27 03:45:50] 2023-07-27 02:44:57,673 | INFO     | monitor loop #223: job 0:5914558916 is in state 'stageout'
[2023-07-27 03:45:50] 2023-07-27 02:44:57,707 | INFO     | number of running child processes to parent process 16609: 1
[2023-07-27 03:45:50] 2023-07-27 02:44:57,707 | INFO     | maximum number of monitored processes: 5
[2023-07-27 03:45:50] 2023-07-27 02:45:00,209 | INFO     | monitor loop #224: job 0:5914558916 is in state 'stageout'
[2023-07-27 03:45:50] 2023-07-27 02:45:00,246 | INFO     | number of running child processes to parent process 16609: 1
[2023-07-27 03:45:50] 2023-07-27 02:45:00,246 | INFO     | maximum number of monitored processes: 5
[2023-07-27 03:45:50] 2023-07-27 02:45:02,747 | INFO     | monitor loop #225: job 0:5914558916 is in state 'stageout'
[2023-07-27 03:45:50] 2023-07-27 02:45:02,781 | INFO     | number of running child processes to parent process 16609: 1
[2023-07-27 03:45:50] 2023-07-27 02:45:02,781 | INFO     | maximum number of monitored processes: 5
[2023-07-27 03:45:50] 2023-07-27 02:45:05,283 | INFO     | monitor loop #226: job 0:5914558916 is in state 'stageout'
[2023-07-27 03:45:50] 2023-07-27 02:45:05,328 | INFO     | number of running child processes to parent process 16609: 1
[2023-07-27 03:45:50] 2023-07-27 02:45:05,329 | INFO     | maximum number of monitored processes: 5
[2023-07-27 03:45:50] 2023-07-27 02:45:07,831 | INFO     | monitor loop #227: job 0:5914558916 is in state 'stageout'
[2023-07-27 03:45:50] 2023-07-27 02:45:07,867 | INFO     | number of running child processes to parent process 16609: 1
[2023-07-27 03:45:50] 2023-07-27 02:45:07,867 | INFO     | maximum number of monitored processes: 5
[2023-07-27 03:45:50] 2023-07-27 02:45:10,370 | INFO     | monitor loop #228: job 0:5914558916 is in state 'stageout'
[2023-07-27 03:45:50] 2023-07-27 02:45:10,403 | INFO     | number of running child processes to parent process 16609: 1
[2023-07-27 03:45:50] 2023-07-27 02:45:10,403 | INFO     | maximum number of monitored processes: 5
[2023-07-27 03:45:50] 2023-07-27 02:45:12,906 | INFO     | monitor loop #229: job 0:5914558916 is in state 'stageout'
[2023-07-27 03:45:50] 2023-07-27 02:45:12,949 | INFO     | number of running child processes to parent process 16609: 1
[2023-07-27 03:45:50] 2023-07-27 02:45:12,949 | INFO     | maximum number of monitored processes: 5
[2023-07-27 03:45:50] 2023-07-27 02:45:15,450 | INFO     | monitor loop #230: job 0:5914558916 is in state 'stageout'
[2023-07-27 03:45:50] 2023-07-27 02:45:15,492 | INFO     | number of running child processes to parent process 16609: 1
[2023-07-27 03:45:50] 2023-07-27 02:45:15,492 | INFO     | maximum number of monitored processes: 5
[2023-07-27 03:45:50] 2023-07-27 02:45:16,931 | INFO     | [attempt=3/3] loading data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json
[2023-07-27 03:45:50] 2023-07-27 02:45:17,073 | WARNING  | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: 
[2023-07-27 03:45:50] 2023-07-27 02:45:17,073 | WARNING  | cache file=/home/m/BOINC/slots/1/agis_ddmendpoints.agis.ALL.json is not available: [Errno 2] No such file or directory: '/home/m/BOINC/slots/1/agis_ddmendpoints.ag
[2023-07-27 03:45:50] 2023-07-27 02:45:17,132 | INFO     | transferring file 644dad0c-218a-462c-a493-1ad7f4151e21_35881.1.job.log.tgz from /home/m/BOINC/slots/1/PanDA_Pilot-5914558916/644dad0c-218a-462c-a493-1ad7f4151e21_3
[2023-07-27 03:45:50] 2023-07-27 02:45:17,132 | INFO     | executing command: /usr/bin/env mv /home/m/BOINC/slots/1/PanDA_Pilot-5914558916/644dad0c-218a-462c-a493-1ad7f4151e21_35881.1.job.log.tgz /home/m/BOINC/slots/1/644d
[2023-07-27 03:45:50] 2023-07-27 02:45:17,148 | INFO     | Adding to output.list: 644dad0c-218a-462c-a493-1ad7f4151e21_35881.1.job.log.tgz davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/3d/8e/644dad0c-218a-
[2023-07-27 03:45:50] 2023-07-27 02:45:17,149 | INFO     | summary of transferred files:
[2023-07-27 03:45:50] 2023-07-27 02:45:17,149 | INFO     |  -- lfn=644dad0c-218a-462c-a493-1ad7f4151e21_35881.1.job.log.tgz, status_code=0, status=transferred
[2023-07-27 03:45:50] 2023-07-27 02:45:17,149 | INFO     | stage-out finished correctly
[2023-07-27 03:45:50] 2023-07-27 02:45:17,995 | INFO     | monitor loop #231: job 0:5914558916 is in state 'finished'
[2023-07-27 03:45:50] 2023-07-27 02:45:17,996 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-07-27 03:45:50] 2023-07-27 02:45:18,795 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2023-07-27 03:45:50] 2023-07-27 02:45:20,499 | INFO     | monitor loop #232: job 0:5914558916 is in state 'finished'
[2023-07-27 03:45:50] 2023-07-27 02:45:20,499 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-07-27 03:45:50] 2023-07-27 02:45:21,122 | INFO     | job 5914558916 has state=finished
[2023-07-27 03:45:50] 2023-07-27 02:45:21,122 | INFO     | preparing for final server update for job 5914558916 in state='finished'
[2023-07-27 03:45:50] 2023-07-27 02:45:21,122 | INFO     | this job has now completed (state=finished)
[2023-07-27 03:45:50] 2023-07-27 02:45:21,122 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2023-07-27 03:45:50] 2023-07-27 02:45:21,123 | INFO     | job 5914558916 has finished - writing final server update
[2023-07-27 03:45:50] 2023-07-27 02:45:21,123 | INFO     | fitting pss+swap vs Time
[2023-07-27 03:45:50] 2023-07-27 02:45:21,124 | INFO     | current memory leak: 601.88 B/s (using 10 data points, chi2=0.04)
[2023-07-27 03:45:50] 2023-07-27 02:45:21,124 | INFO     | total number of processed events: 2 (read)
[2023-07-27 03:45:50] 2023-07-27 02:45:21,144 | INFO     | executing command: lscpu
[2023-07-27 03:45:50] 2023-07-27 02:45:21,157 | INFO     | found 2 cores (2 cores per socket, 1 sockets)
[2023-07-27 03:45:50] 2023-07-27 02:45:21,157 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2023-07-27 03:45:50] 2023-07-27 02:45:21,177 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2023-07-27 03:45:50] 2023-07-27 02:45:22,999 | INFO     | monitor loop #233: job 0:5914558916 is in state 'finished'
[2023-07-27 03:45:50] 2023-07-27 02:45:23,000 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-07-27 03:45:50] 2023-07-27 02:45:25,503 | INFO     | monitor loop #234: job 0:5914558916 is in state 'finished'
[2023-07-27 03:45:50] 2023-07-27 02:45:25,503 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-07-27 03:45:50] 2023-07-27 02:45:28,006 | INFO     | monitor loop #235: job 0:5914558916 is in state 'finished'
[2023-07-27 03:45:50] 2023-07-27 02:45:28,007 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-07-27 03:45:50] 2023-07-27 02:45:28,691 | INFO     | CPU arch script returned: x86-64-v2
[2023-07-27 03:45:50] 2023-07-27 02:45:28,692 | INFO     | using path: /home/m/BOINC/slots/1/PanDA_Pilot-5914558916/memory_monitor_summary.json (trf name=prmon)
[2023-07-27 03:45:50] 2023-07-27 02:45:28,693 | INFO     | extracted standard info from prmon json
[2023-07-27 03:45:50] 2023-07-27 02:45:28,693 | INFO     | extracted standard memory fields from prmon json
[2023-07-27 03:45:50] 2023-07-27 02:45:28,693 | INFO     | ..............................
[2023-07-27 03:45:50] 2023-07-27 02:45:28,693 | INFO     | . Timing measurements:
[2023-07-27 03:45:50] 2023-07-27 02:45:28,693 | INFO     | . get job = 68 s
[2023-07-27 03:45:50] 2023-07-27 02:45:28,693 | INFO     | . initial setup = 52 s
[2023-07-27 03:45:50] 2023-07-27 02:45:28,694 | INFO     | . payload setup = 11 s
[2023-07-27 03:45:50] 2023-07-27 02:45:28,694 | INFO     | . stage-in = 57 s
[2023-07-27 03:45:50] 2023-07-27 02:45:28,694 | INFO     | . payload execution = 1029 s
[2023-07-27 03:45:50] 2023-07-27 02:45:28,694 | INFO     | . stage-out = 367 s
[2023-07-27 03:45:50] 2023-07-27 02:45:28,694 | INFO     | ..............................
[2023-07-27 03:45:50] 2023-07-27 02:45:28,785 | INFO     | 
[2023-07-27 03:45:50] 2023-07-27 02:45:28,786 | INFO     | job summary report
[2023-07-27 03:45:50] 2023-07-27 02:45:28,786 | INFO     | --------------------------------------------------
[2023-07-27 03:45:50] 2023-07-27 02:45:28,786 | INFO     | PanDA job id: 5914558916
[2023-07-27 03:45:50] 2023-07-27 02:45:28,786 | INFO     | task id: NULL
[2023-07-27 03:45:50] 2023-07-27 02:45:28,786 | INFO     | errors: (none)
[2023-07-27 03:45:50] 2023-07-27 02:45:28,786 | INFO     | status: LOG_TRANSFER = DONE 
[2023-07-27 03:45:50] 2023-07-27 02:45:28,786 | INFO     | pilot state: finished 
[2023-07-27 03:45:50] 2023-07-27 02:45:28,786 | INFO     | transexitcode: 0
[2023-07-27 03:45:50] 2023-07-27 02:45:28,786 | INFO     | exeerrorcode: 0
[2023-07-27 03:45:50] 2023-07-27 02:45:28,787 | INFO     | exeerrordiag: 
[2023-07-27 03:45:50] 2023-07-27 02:45:28,787 | INFO     | exitcode: 0
[2023-07-27 03:45:50] 2023-07-27 02:45:28,787 | INFO     | exitmsg: OK
[2023-07-27 03:45:50] 2023-07-27 02:45:28,787 | INFO     | cpuconsumptiontime: 862 s
[2023-07-27 03:45:50] 2023-07-27 02:45:28,787 | INFO     | nevents: 2
[2023-07-27 03:45:50] 2023-07-27 02:45:28,787 | INFO     | neventsw: 0
[2023-07-27 03:45:50] 2023-07-27 02:45:28,787 | INFO     | pid: 16609
[2023-07-27 03:45:50] 2023-07-27 02:45:28,787 | INFO     | pgrp: 16609
[2023-07-27 03:45:50] 2023-07-27 02:45:28,787 | INFO     | corecount: 4
[2023-07-27 03:45:50] 2023-07-27 02:45:28,787 | INFO     | event service: False
[2023-07-27 03:45:50] 2023-07-27 02:45:28,788 | INFO     | sizes: {0: 2470368, 1: 2470510, 11: 2470656, 22: 2470684, 33: 2470712, 43: 2470740, 54: 2470896, 63: 2470984, 65: 2471012, 1044: 2490841, 1411: 2500149, 1413: 2500
[2023-07-27 03:45:50] 2023-07-27 02:45:28,788 | INFO     | --------------------------------------------------
[2023-07-27 03:45:50] 2023-07-27 02:45:28,788 | INFO     | 
[2023-07-27 03:45:50] 2023-07-27 02:45:28,788 | INFO     | executing command: ls -lF /home/m/BOINC/slots/1
[2023-07-27 03:45:50] 2023-07-27 02:45:28,803 | INFO     | queue jobs had 0 job(s) [purged]
[2023-07-27 03:45:50] 2023-07-27 02:45:28,803 | INFO     | queue payloads had 0 job(s) [purged]
[2023-07-27 03:45:50] 2023-07-27 02:45:28,803 | INFO     | queue data_in had 0 job(s) [purged]
[2023-07-27 03:45:50] 2023-07-27 02:45:28,803 | INFO     | queue data_out had 0 job(s) [purged]
[2023-07-27 03:45:50] 2023-07-27 02:45:28,804 | INFO     | queue current_data_in had 0 job(s) [purged]
[2023-07-27 03:45:50] 2023-07-27 02:45:28,804 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2023-07-27 03:45:50] 2023-07-27 02:45:28,804 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2023-07-27 03:45:50] 2023-07-27 02:45:28,804 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2023-07-27 03:45:50] 2023-07-27 02:45:28,804 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2023-07-27 03:45:50] 2023-07-27 02:45:28,804 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2023-07-27 03:45:50] 2023-07-27 02:45:28,804 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2023-07-27 03:45:50] 2023-07-27 02:45:28,804 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2023-07-27 03:45:50] 2023-07-27 02:45:28,804 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2023-07-27 03:45:50] 2023-07-27 02:45:28,804 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2023-07-27 03:45:50] 2023-07-27 02:45:28,804 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2023-07-27 03:45:50] 2023-07-27 02:45:28,804 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2023-07-27 03:45:50] 2023-07-27 02:45:28,804 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2023-07-27 03:45:50] 2023-07-27 02:45:28,804 | INFO     | queue completed_jobids has 1 job(s)
[2023-07-27 03:45:50] 2023-07-27 02:45:28,804 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2023-07-27 03:45:50] 2023-07-27 02:45:28,805 | INFO     | queue messages had 0 job(s) [purged]
[2023-07-27 03:45:50] 2023-07-27 02:45:28,805 | INFO     | job 5914558916 has completed (purged errors)
[2023-07-27 03:45:50] 2023-07-27 02:45:28,805 | INFO     | overall cleanup function is called
[2023-07-27 03:45:50] 2023-07-27 02:45:29,807 | INFO     | --- collectZombieJob: --- 10, [16609]
[2023-07-27 03:45:50] 2023-07-27 02:45:29,807 | INFO     | zombie collector trying to kill pid 16609
[2023-07-27 03:45:50] 2023-07-27 02:45:29,807 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2023-07-27 03:45:50] 2023-07-27 02:45:30,813 | INFO     | collected zombie processes
[2023-07-27 03:45:50] 2023-07-27 02:45:30,813 | INFO     | will now attempt to kill all subprocesses of pid=16609
[2023-07-27 03:45:50] 2023-07-27 02:45:30,847 | INFO     | process IDs to be killed: [16609] (in reverse order)
[2023-07-27 03:45:50] 2023-07-27 02:45:30,883 | WARNING  | found no corresponding commands to process id(s)
[2023-07-27 03:45:50] 2023-07-27 02:45:30,883 | INFO     | Do not look for orphan processes in BOINC jobs
[2023-07-27 03:45:50] 2023-07-27 02:45:30,883 | INFO     | ready for new job
[2023-07-27 03:45:50] 2023-07-27 02:45:30,883 | INFO     | pilot has finished with previous job - re-establishing logging
[2023-07-27 03:45:50] 2023-07-27 02:45:30,884 | INFO     | *************************************
[2023-07-27 03:45:50] 2023-07-27 02:45:30,884 | INFO     | ***  PanDA Pilot version 3.6.4.7  ***
[2023-07-27 03:45:50] 2023-07-27 02:45:30,884 | INFO     | *************************************
[2023-07-27 03:45:50] 2023-07-27 02:45:30,884 | INFO     | 
[2023-07-27 03:45:50] 2023-07-27 02:45:30,903 | INFO     | architecture information:
[2023-07-27 03:45:50] 2023-07-27 02:45:30,904 | INFO     | executing command: cat /etc/os-release
[2023-07-27 03:45:50] 2023-07-27 02:45:30,915 | INFO     | cat /etc/os-release:
[2023-07-27 03:45:50] NAME="CentOS Linux"
[2023-07-27 03:45:50] VERSION="7 (Core)"
[2023-07-27 03:45:50] ID="centos"
[2023-07-27 03:45:50] ID_LIKE="rhel fedora"
[2023-07-27 03:45:50] VERSION_ID="7"
[2023-07-27 03:45:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2023-07-27 03:45:50] ANSI_COLOR="0;31"
[2023-07-27 03:45:50] CPE_NAME="cpe:/o:centos:centos:7"
[2023-07-27 03:45:50] HOME_URL="https://www.centos.org/"
[2023-07-27 03:45:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2023-07-27 03:45:50] 
[2023-07-27 03:45:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2023-07-27 03:45:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2023-07-27 03:45:50] REDHAT_SUPPORT_PRODUCT="centos"
[2023-07-27 03:45:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2023-07-27 03:45:50] 
[2023-07-27 03:45:50] 2023-07-27 02:45:30,915 | INFO     | *************************************
[2023-07-27 03:45:50] 2023-07-27 02:45:31,418 | INFO     | executing command: df -mP /home/m/BOINC/slots/1
[2023-07-27 03:45:50] 2023-07-27 02:45:31,429 | INFO     | sufficient remaining disk space (423143407616 B)
[2023-07-27 03:45:50] 2023-07-27 02:45:31,430 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2023-07-27 03:45:50] 2023-07-27 02:45:31,430 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2023-07-27 03:45:50] 2023-07-27 02:45:31,430 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2023-07-27 03:45:50] 2023-07-27 02:45:31,430 | INFO     | found 0 job(s) in 20 queues
[2023-07-27 03:45:50] 2023-07-27 02:45:31,430 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2023-07-27 03:45:50] 2023-07-27 02:45:31,430 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2023-07-27 03:45:50] 2023-07-27 02:45:31,511 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2023-07-27 03:45:50] 2023-07-27 02:45:31,511 | INFO     | aborting loop
[2023-07-27 03:45:50] 2023-07-27 02:45:32,435 | INFO     | [job] retrieve thread has finished
[2023-07-27 03:45:50] 2023-07-27 02:45:32,517 | INFO     | [job] job monitor thread has finished
[2023-07-27 03:45:50] 2023-07-27 02:45:32,666 | INFO     | [payload] validate_post thread has finished
[2023-07-27 03:45:50] 2023-07-27 02:45:32,715 | INFO     | [payload] execute_payloads thread has finished
[2023-07-27 03:45:50] 2023-07-27 02:45:32,730 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2023-07-27 03:45:50] 2023-07-27 02:45:32,759 | INFO     | [payload] failed_post thread has finished
[2023-07-27 03:45:50] 2023-07-27 02:45:32,869 | INFO     | [job] validate thread has finished
[2023-07-27 03:45:50] 2023-07-27 02:45:32,941 | INFO     | [data] copytool_in thread has finished
[2023-07-27 03:45:50] 2023-07-27 02:45:33,102 | INFO     | [payload] control thread has finished
[2023-07-27 03:45:50] 2023-07-27 02:45:33,234 | INFO     | [job] create_data_payload thread has finished
[2023-07-27 03:45:50] 2023-07-27 02:45:33,375 | INFO     | [data] control thread has finished
[2023-07-27 03:45:50] 2023-07-27 02:45:33,567 | INFO     | [payload] validate_pre thread has finished
[2023-07-27 03:45:50] 2023-07-27 02:45:33,762 | INFO     | [job] control thread has finished
[2023-07-27 03:45:50] 2023-07-27 02:45:33,796 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2023-07-27 03:45:50] 2023-07-27 02:45:33,860 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2023-07-27 03:45:50] 2023-07-27 02:45:34,732 | INFO     | [data] copytool_out thread has finished
[2023-07-27 03:45:50] 2023-07-27 02:45:34,801 | INFO     | [job] queue monitor thread has finished
[2023-07-27 03:45:50] 2023-07-27 02:45:37,866 | INFO     | [data] queue_monitor thread has finished
[2023-07-27 03:45:50] 2023-07-27 02:45:41,917 | INFO     | job.realtimelogging is not enabled
[2023-07-27 03:45:50] 2023-07-27 02:45:42,923 | INFO     | [payload] run_realtimelog thread has finished
[2023-07-27 03:45:50] 2023-07-27 02:45:45,028 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139952409147200)>', '<ExcThread(monitor, started 139951769380608)>']
[2023-07-27 03:45:50] 2023-07-27 02:45:45,491 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2023-07-27 03:45:50] 2023-07-27 02:45:45,492 | INFO     | [monitor] control thread has ended
[2023-07-27 03:45:50] 2023-07-27 02:45:50,051 | INFO     | end of generic workflow (traces error code: 0)
[2023-07-27 03:45:50] 2023-07-27 02:45:50,052 | INFO     | traces error code: 0
[2023-07-27 03:45:50] 2023-07-27 02:45:50,052 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2023-07-27 03:45:50] 2023-07-27 02:45:50,097 [wrapper] ==== pilot stdout END ====
[2023-07-27 03:45:50] 2023-07-27 02:45:50,100 [wrapper] ==== wrapper stdout RESUME ====
[2023-07-27 03:45:50] 2023-07-27 02:45:50,103 [wrapper] pilotpid: 9188
[2023-07-27 03:45:50] 2023-07-27 02:45:50,106 [wrapper] Pilot exit status: 0
[2023-07-27 03:45:50] 2023-07-27 02:45:50,116 [wrapper] pandaids: 5914558916
[2023-07-27 03:45:50] 2023-07-27 02:45:50,123 [wrapper] apfmon messages muted
[2023-07-27 03:45:50] 2023-07-27 02:45:50,126 [wrapper] Test setup, not cleaning
[2023-07-27 03:45:50] 2023-07-27 02:45:50,129 [wrapper] ==== wrapper stdout END ====
[2023-07-27 03:45:50] 2023-07-27 02:45:50,132 [wrapper] ==== wrapper stderr END ====
[2023-07-27 03:45:50] 2023-07-27 02:45:50,138 [wrapper] wrapperexiting ec=0, duration=1691
[2023-07-27 03:45:50] 2023-07-27 02:45:50,141 [wrapper] apfmon messages muted
[2023-07-27 03:45:50]  *** Error codes and diagnostics ***
[2023-07-27 03:45:50]     "exeErrorCode": 0,
[2023-07-27 03:45:50]     "exeErrorDiag": "",
[2023-07-27 03:45:50]     "pilotErrorCode": 0,
[2023-07-27 03:45:50]     "pilotErrorDiag": "",
[2023-07-27 03:45:50]  *** Listing of results directory ***
[2023-07-27 03:45:50] total 44328
[2023-07-27 03:45:50] -rw-r--r-- 1 m m   418016 Jul 27 02:21 pilot3.tar.gz
[2023-07-27 03:45:50] -rw-r--r-- 1 m m     4388 Jul 27 03:12 queuedata.json
[2023-07-27 03:45:50] -rwx------ 1 m m    27277 Jul 27 03:14 runpilot2-wrapper.sh
[2023-07-27 03:45:50] -rw-rw-r-- 1 m m      107 Jul 27 03:17 wrapper_26015_x86_64-pc-linux-gnu
[2023-07-27 03:45:50] -rwxr-xr-x 1 m m     7986 Jul 27 03:17 run_atlas
[2023-07-27 03:45:50] -rw-rw-r-- 1 m m      112 Jul 27 03:17 job.xml
[2023-07-27 03:45:50] -rw-r--r-- 2 m m 38184411 Jul 27 03:17 EVNT.04972714._000028.pool.root.1
[2023-07-27 03:45:50] -rw-r--r-- 2 m m    17604 Jul 27 03:17 start_atlas.sh
[2023-07-27 03:45:50] drwxrwx--x 2 m m     4096 Jul 27 03:17 shared
[2023-07-27 03:45:50] -rw-r--r-- 2 m m   428861 Jul 27 03:17 input.tar.gz
[2023-07-27 03:45:50] -rw-rw-r-- 1 m m     5728 Jul 27 03:17 init_data.xml
[2023-07-27 03:45:50] -rw-rw-r-- 1 m m        0 Jul 27 03:17 boinc_lockfile
[2023-07-27 03:45:50] -rw-rw-r-- 1 m m     2754 Jul 27 03:17 pandaJob.out
[2023-07-27 03:45:50] -rw------- 1 m m      424 Jul 27 03:17 setup.sh.local
[2023-07-27 03:45:50] -rw------- 1 m m  1012582 Jul 27 03:18 agis_schedconf.cvmfs.json
[2023-07-27 03:45:50] -rw------- 1 m m  1378970 Jul 27 03:19 cric_ddmendpoints.json
[2023-07-27 03:45:50] drwx------ 4 m m     4096 Jul 27 03:20 pilot3
[2023-07-27 03:45:50] -rw------- 1 m m  1493291 Jul 27 03:39 output.1.644dad0c-218a-462c-a493-1ad7f4151e21_35881.pool.root
[2023-07-27 03:45:50] -rw------- 1 m m     1016 Jul 27 03:39 memory_monitor_summary.json
[2023-07-27 03:45:50] -rw-rw-r-- 1 m m      533 Jul 27 03:39 boinc_task_state.xml
[2023-07-27 03:45:50] -rw------- 1 m m   162823 Jul 27 03:42 644dad0c-218a-462c-a493-1ad7f4151e21_35881.1.job.log.tgz
[2023-07-27 03:45:50] -rw------- 1 m m     6671 Jul 27 03:45 heartbeat.json
[2023-07-27 03:45:50] -rw-rw-r-- 1 m m       25 Jul 27 03:45 wrapper_checkpoint.txt
[2023-07-27 03:45:50] -rw-rw-r-- 1 m m     8192 Jul 27 03:45 boinc_mmap_file
[2023-07-27 03:45:50] -rw------- 1 m m     4092 Jul 27 03:45 pilotlog.txt
[2023-07-27 03:45:50] -rw------- 1 m m   215233 Jul 27 03:45 644dad0c-218a-462c-a493-1ad7f4151e21_35881.1.job.log
[2023-07-27 03:45:50] -rw------- 1 m m      464 Jul 27 03:45 output.list
[2023-07-27 03:45:50] -rw-rw-r-- 1 m m      748 Jul 27 03:45 runtime_log
[2023-07-27 03:45:50] -rw------- 1 m m  1894400 Jul 27 03:45 result.tar.gz
[2023-07-27 03:45:50] -rw-rw-r-- 1 m m    11905 Jul 27 03:45 runtime_log.err
[2023-07-27 03:45:50] -rw------- 1 m m      627 Jul 27 03:45 PI0KDmKh5i3n7Olcko1bjSoqABFKDmABFKDm7AsVDmg6NKDm5CgfIo.diag
[2023-07-27 03:45:50] -rw-rw-r-- 1 m m    22496 Jul 27 03:45 stderr.txt
[2023-07-27 03:45:50] HITS file was successfully produced:
[2023-07-27 03:45:50] -rw------- 1 m m 1493291 Jul 27 03:39 shared/HITS.pool.root.1
[2023-07-27 03:45:50]  *** Contents of shared directory: ***
[2023-07-27 03:45:50] total 41044
[2023-07-27 03:45:50] -rw-r--r-- 2 m m 38184411 Jul 27 03:17 ATLAS.root_0
[2023-07-27 03:45:50] -rw-r--r-- 2 m m    17604 Jul 27 03:17 start_atlas.sh
[2023-07-27 03:45:50] -rw-r--r-- 2 m m   428861 Jul 27 03:17 input.tar.gz
[2023-07-27 03:45:50] -rw------- 1 m m  1493291 Jul 27 03:39 HITS.pool.root.1
[2023-07-27 03:45:50] -rw------- 1 m m  1894400 Jul 27 03:45 result.tar.gz
03:45:51 (5512): run_atlas exited; CPU time 844.589247
03:45:51 (5512): called boinc_finish(0)

</stderr_txt>
]]>


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