Name dG9NDmMBXk3n7Olcko1bjSoqABFKDmABFKDm7AsVDmEJOKDmwlozlm_0
Workunit 2321915
Created 31 Jul 2023, 1:47:22 UTC
Sent 31 Jul 2023, 1:49:45 UTC
Report deadline 7 Aug 2023, 1:49:45 UTC
Received 31 Jul 2023, 2:13:04 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 1498
Run time 21 min 2 sec
CPU time 8 min 36 sec
Validate state Valid
Credit 13.92
Device peak FLOPS 13.05 GFLOPS
Application version ATLAS Simulation v3.01 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 1.50 GB
Peak swap size 2.12 GB
Peak disk usage 79.79 MB

Stderr output

<core_client_version>7.4.25</core_client_version>
<![CDATA[
<stderr_txt>
02:50:51 (21191): wrapper (7.7.26015): starting
02:50:51 (21191): wrapper: running run_atlas (--nthreads 4)
[2023-07-31 02:50:51] Arguments: --nthreads 4
[2023-07-31 02:50:51] Threads: 4
[2023-07-31 02:50:51] Checking for CVMFS
[2023-07-31 02:51:12] Probing /cvmfs/atlas.cern.ch... OK
[2023-07-31 02:51:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2023-07-31 02:51:12] Running cvmfs_config stat atlas.cern.ch
[2023-07-31 02:51:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2023-07-31 02:51:12] 2.9.0.0 21353 0 24560 121910 4 1 2946503 4194305 0 130560 0 0 0.000 829 44 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.161.84:3126 1
[2023-07-31 02:51:12] CVMFS is ok
[2023-07-31 02:51:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2023-07-31 02:51:12] Checking for apptainer binary...
[2023-07-31 02:51:12] Using apptainer found in PATH at /usr/bin/apptainer
[2023-07-31 02:51:12] Running /usr/bin/apptainer --version
[2023-07-31 02:51:12] apptainer version 1.0.3
[2023-07-31 02:51:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2023-07-31 02:51:13] TeeC16
[2023-07-31 02:51:13] apptainer works
[2023-07-31 02:51:13] Set ATHENA_PROC_NUMBER=4
[2023-07-31 02:51:13] Set ATHENA_CORE_NUMBER=4
[2023-07-31 02:51:13] Starting ATLAS job with PandaID=5918011467
[2023-07-31 02:51:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/m/BOINC/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2023-07-31 03:11:50]  *** The last 200 lines of the pilot log: ***
[2023-07-31 03:11:50] 2023-07-31 02:10:57,131 | INFO     | maximum number of monitored processes: 5
[2023-07-31 03:11:50] 2023-07-31 02:10:59,634 | INFO     | monitor loop #173: job 0:5918011467 is in state 'stageout'
[2023-07-31 03:11:50] 2023-07-31 02:10:59,677 | INFO     | number of running child processes to parent process 32296: 1
[2023-07-31 03:11:50] 2023-07-31 02:10:59,678 | INFO     | maximum number of monitored processes: 5
[2023-07-31 03:11:50] 2023-07-31 02:11:02,181 | INFO     | monitor loop #174: job 0:5918011467 is in state 'stageout'
[2023-07-31 03:11:50] 2023-07-31 02:11:02,223 | INFO     | number of running child processes to parent process 32296: 1
[2023-07-31 03:11:50] 2023-07-31 02:11:02,224 | INFO     | maximum number of monitored processes: 5
[2023-07-31 03:11:50] 2023-07-31 02:11:03,775 | INFO     | [attempt=2/3] loading data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json
[2023-07-31 03:11:50] 2023-07-31 02:11:03,951 | WARNING  | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: 
[2023-07-31 03:11:50] 2023-07-31 02:11:03,951 | INFO     | will try again after 16s..
[2023-07-31 03:11:50] 2023-07-31 02:11:04,724 | INFO     | monitor loop #175: job 0:5918011467 is in state 'stageout'
[2023-07-31 03:11:50] 2023-07-31 02:11:04,774 | INFO     | number of running child processes to parent process 32296: 1
[2023-07-31 03:11:50] 2023-07-31 02:11:04,775 | INFO     | maximum number of monitored processes: 5
[2023-07-31 03:11:50] 2023-07-31 02:11:05,309 | INFO     | 1150s have passed since pilot start
[2023-07-31 03:11:50] 2023-07-31 02:11:07,278 | INFO     | monitor loop #176: job 0:5918011467 is in state 'stageout'
[2023-07-31 03:11:50] 2023-07-31 02:11:07,324 | INFO     | number of running child processes to parent process 32296: 1
[2023-07-31 03:11:50] 2023-07-31 02:11:07,324 | INFO     | maximum number of monitored processes: 5
[2023-07-31 03:11:50] 2023-07-31 02:11:09,827 | INFO     | monitor loop #177: job 0:5918011467 is in state 'stageout'
[2023-07-31 03:11:50] 2023-07-31 02:11:09,861 | INFO     | number of running child processes to parent process 32296: 1
[2023-07-31 03:11:50] 2023-07-31 02:11:09,862 | INFO     | maximum number of monitored processes: 5
[2023-07-31 03:11:50] 2023-07-31 02:11:12,365 | INFO     | monitor loop #178: job 0:5918011467 is in state 'stageout'
[2023-07-31 03:11:50] 2023-07-31 02:11:12,408 | INFO     | number of running child processes to parent process 32296: 1
[2023-07-31 03:11:50] 2023-07-31 02:11:12,408 | INFO     | maximum number of monitored processes: 5
[2023-07-31 03:11:50] 2023-07-31 02:11:14,911 | INFO     | monitor loop #179: job 0:5918011467 is in state 'stageout'
[2023-07-31 03:11:50] 2023-07-31 02:11:14,958 | INFO     | number of running child processes to parent process 32296: 1
[2023-07-31 03:11:50] 2023-07-31 02:11:14,958 | INFO     | maximum number of monitored processes: 5
[2023-07-31 03:11:50] 2023-07-31 02:11:17,461 | INFO     | monitor loop #180: job 0:5918011467 is in state 'stageout'
[2023-07-31 03:11:50] 2023-07-31 02:11:17,499 | INFO     | number of running child processes to parent process 32296: 1
[2023-07-31 03:11:50] 2023-07-31 02:11:17,499 | INFO     | maximum number of monitored processes: 5
[2023-07-31 03:11:50] 2023-07-31 02:11:20,003 | INFO     | monitor loop #181: job 0:5918011467 is in state 'stageout'
[2023-07-31 03:11:50] 2023-07-31 02:11:20,031 | INFO     | [attempt=3/3] loading data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json
[2023-07-31 03:11:50] 2023-07-31 02:11:20,043 | INFO     | number of running child processes to parent process 32296: 1
[2023-07-31 03:11:50] 2023-07-31 02:11:20,044 | INFO     | maximum number of monitored processes: 5
[2023-07-31 03:11:50] 2023-07-31 02:11:20,167 | WARNING  | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: 
[2023-07-31 03:11:50] 2023-07-31 02:11:20,167 | WARNING  | cache file=/home/m/BOINC/slots/1/agis_ddmendpoints.agis.ALL.json is not available: [Errno 2] No such file or directory: '/home/m/BOINC/slots/1/agis_ddmendpoints.ag
[2023-07-31 03:11:50] 2023-07-31 02:11:20,218 | INFO     | transferring file 0f92202a-d422-4a0b-9c3a-fe60a4528505_98284.1.job.log.tgz from /home/m/BOINC/slots/1/PanDA_Pilot-5918011467/0f92202a-d422-4a0b-9c3a-fe60a4528505_9
[2023-07-31 03:11:50] 2023-07-31 02:11:20,218 | INFO     | executing command: /usr/bin/env mv /home/m/BOINC/slots/1/PanDA_Pilot-5918011467/0f92202a-d422-4a0b-9c3a-fe60a4528505_98284.1.job.log.tgz /home/m/BOINC/slots/1/0f92
[2023-07-31 03:11:50] 2023-07-31 02:11:20,234 | INFO     | Adding to output.list: 0f92202a-d422-4a0b-9c3a-fe60a4528505_98284.1.job.log.tgz davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/28/1e/0f92202a-d422-
[2023-07-31 03:11:50] 2023-07-31 02:11:20,234 | INFO     | summary of transferred files:
[2023-07-31 03:11:50] 2023-07-31 02:11:20,235 | INFO     |  -- lfn=0f92202a-d422-4a0b-9c3a-fe60a4528505_98284.1.job.log.tgz, status_code=0, status=transferred
[2023-07-31 03:11:50] 2023-07-31 02:11:20,235 | INFO     | stage-out finished correctly
[2023-07-31 03:11:50] 2023-07-31 02:11:20,310 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2023-07-31 03:11:50] 2023-07-31 02:11:21,240 | INFO     | job 5918011467 has state=finished
[2023-07-31 03:11:50] 2023-07-31 02:11:21,241 | INFO     | preparing for final server update for job 5918011467 in state='finished'
[2023-07-31 03:11:50] 2023-07-31 02:11:21,241 | INFO     | this job has now completed (state=finished)
[2023-07-31 03:11:50] 2023-07-31 02:11:21,241 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2023-07-31 03:11:50] 2023-07-31 02:11:21,241 | INFO     | job 5918011467 has finished - writing final server update
[2023-07-31 03:11:50] 2023-07-31 02:11:21,242 | WARNING  | wrong length of table data, x=[1690768790.0, 1690768851.0, 1690768912.0, 1690768973.0, 1690769034.0], y=[1636739.0, 1644486.0, 1651554.0, 1659258.0, 1667786.0] (mu
[2023-07-31 03:11:50] 2023-07-31 02:11:21,242 | INFO     | total number of processed events: 2 (read)
[2023-07-31 03:11:50] 2023-07-31 02:11:21,260 | INFO     | executing command: lscpu
[2023-07-31 03:11:50] 2023-07-31 02:11:21,274 | INFO     | found 2 cores (2 cores per socket, 1 sockets)
[2023-07-31 03:11:50] 2023-07-31 02:11:21,274 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2023-07-31 03:11:50] 2023-07-31 02:11:21,296 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2023-07-31 03:11:50] 2023-07-31 02:11:22,547 | INFO     | monitor loop #182: job 0:5918011467 is in state 'finished'
[2023-07-31 03:11:50] 2023-07-31 02:11:22,547 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-07-31 03:11:50] 2023-07-31 02:11:25,055 | INFO     | monitor loop #183: job 0:5918011467 is in state 'finished'
[2023-07-31 03:11:50] 2023-07-31 02:11:25,055 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-07-31 03:11:50] 2023-07-31 02:11:27,558 | INFO     | monitor loop #184: job 0:5918011467 is in state 'finished'
[2023-07-31 03:11:50] 2023-07-31 02:11:27,559 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-07-31 03:11:50] 2023-07-31 02:11:30,059 | INFO     | monitor loop #185: job 0:5918011467 is in state 'finished'
[2023-07-31 03:11:50] 2023-07-31 02:11:30,059 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-07-31 03:11:50] 2023-07-31 02:11:31,142 | INFO     | CPU arch script returned: x86-64-v2
[2023-07-31 03:11:50] 2023-07-31 02:11:31,142 | INFO     | using path: /home/m/BOINC/slots/1/PanDA_Pilot-5918011467/memory_monitor_summary.json (trf name=prmon)
[2023-07-31 03:11:50] 2023-07-31 02:11:31,143 | INFO     | extracted standard info from prmon json
[2023-07-31 03:11:50] 2023-07-31 02:11:31,143 | INFO     | extracted standard memory fields from prmon json
[2023-07-31 03:11:50] 2023-07-31 02:11:31,143 | INFO     | ..............................
[2023-07-31 03:11:50] 2023-07-31 02:11:31,143 | INFO     | . Timing measurements:
[2023-07-31 03:11:50] 2023-07-31 02:11:31,143 | INFO     | . get job = 50 s
[2023-07-31 03:11:50] 2023-07-31 02:11:31,143 | INFO     | . initial setup = 37 s
[2023-07-31 03:11:50] 2023-07-31 02:11:31,144 | INFO     | . payload setup = 7 s
[2023-07-31 03:11:50] 2023-07-31 02:11:31,144 | INFO     | . stage-in = 57 s
[2023-07-31 03:11:50] 2023-07-31 02:11:31,144 | INFO     | . payload execution = 681 s
[2023-07-31 03:11:50] 2023-07-31 02:11:31,144 | INFO     | . stage-out = 316 s
[2023-07-31 03:11:50] 2023-07-31 02:11:31,144 | INFO     | ..............................
[2023-07-31 03:11:50] 2023-07-31 02:11:31,214 | INFO     | 
[2023-07-31 03:11:50] 2023-07-31 02:11:31,214 | INFO     | job summary report
[2023-07-31 03:11:50] 2023-07-31 02:11:31,214 | INFO     | --------------------------------------------------
[2023-07-31 03:11:50] 2023-07-31 02:11:31,214 | INFO     | PanDA job id: 5918011467
[2023-07-31 03:11:50] 2023-07-31 02:11:31,214 | INFO     | task id: NULL
[2023-07-31 03:11:50] 2023-07-31 02:11:31,214 | INFO     | errors: (none)
[2023-07-31 03:11:50] 2023-07-31 02:11:31,214 | INFO     | status: LOG_TRANSFER = DONE 
[2023-07-31 03:11:50] 2023-07-31 02:11:31,214 | INFO     | pilot state: finished 
[2023-07-31 03:11:50] 2023-07-31 02:11:31,214 | INFO     | transexitcode: 0
[2023-07-31 03:11:50] 2023-07-31 02:11:31,215 | INFO     | exeerrorcode: 0
[2023-07-31 03:11:50] 2023-07-31 02:11:31,215 | INFO     | exeerrordiag: 
[2023-07-31 03:11:50] 2023-07-31 02:11:31,215 | INFO     | exitcode: 0
[2023-07-31 03:11:50] 2023-07-31 02:11:31,215 | INFO     | exitmsg: OK
[2023-07-31 03:11:50] 2023-07-31 02:11:31,215 | INFO     | cpuconsumptiontime: 526 s
[2023-07-31 03:11:50] 2023-07-31 02:11:31,215 | INFO     | nevents: 2
[2023-07-31 03:11:50] 2023-07-31 02:11:31,215 | INFO     | neventsw: 0
[2023-07-31 03:11:50] 2023-07-31 02:11:31,215 | INFO     | pid: 32296
[2023-07-31 03:11:50] 2023-07-31 02:11:31,215 | INFO     | pgrp: 32296
[2023-07-31 03:11:50] 2023-07-31 02:11:31,215 | INFO     | corecount: 4
[2023-07-31 03:11:50] 2023-07-31 02:11:31,215 | INFO     | event service: False
[2023-07-31 03:11:50] 2023-07-31 02:11:31,215 | INFO     | sizes: {0: 2470322, 1: 2470521, 11: 2470667, 22: 2470695, 33: 2470723, 43: 2470751, 54: 2470907, 62: 2470995, 64: 2471023, 692: 2490704, 1009: 2500256, 1020: 25004
[2023-07-31 03:11:50] 2023-07-31 02:11:31,215 | INFO     | --------------------------------------------------
[2023-07-31 03:11:50] 2023-07-31 02:11:31,215 | INFO     | 
[2023-07-31 03:11:50] 2023-07-31 02:11:31,216 | INFO     | executing command: ls -lF /home/m/BOINC/slots/1
[2023-07-31 03:11:50] 2023-07-31 02:11:31,230 | INFO     | queue jobs had 0 job(s) [purged]
[2023-07-31 03:11:50] 2023-07-31 02:11:31,230 | INFO     | queue payloads had 0 job(s) [purged]
[2023-07-31 03:11:50] 2023-07-31 02:11:31,231 | INFO     | queue data_in had 0 job(s) [purged]
[2023-07-31 03:11:50] 2023-07-31 02:11:31,231 | INFO     | queue data_out had 0 job(s) [purged]
[2023-07-31 03:11:50] 2023-07-31 02:11:31,231 | INFO     | queue current_data_in had 0 job(s) [purged]
[2023-07-31 03:11:50] 2023-07-31 02:11:31,231 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2023-07-31 03:11:50] 2023-07-31 02:11:31,231 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2023-07-31 03:11:50] 2023-07-31 02:11:31,231 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2023-07-31 03:11:50] 2023-07-31 02:11:31,231 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2023-07-31 03:11:50] 2023-07-31 02:11:31,231 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2023-07-31 03:11:50] 2023-07-31 02:11:31,231 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2023-07-31 03:11:50] 2023-07-31 02:11:31,232 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2023-07-31 03:11:50] 2023-07-31 02:11:31,232 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2023-07-31 03:11:50] 2023-07-31 02:11:31,232 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2023-07-31 03:11:50] 2023-07-31 02:11:31,232 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2023-07-31 03:11:50] 2023-07-31 02:11:31,232 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2023-07-31 03:11:50] 2023-07-31 02:11:31,232 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2023-07-31 03:11:50] 2023-07-31 02:11:31,232 | INFO     | queue completed_jobids has 1 job(s)
[2023-07-31 03:11:50] 2023-07-31 02:11:31,232 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2023-07-31 03:11:50] 2023-07-31 02:11:31,232 | INFO     | queue messages had 0 job(s) [purged]
[2023-07-31 03:11:50] 2023-07-31 02:11:31,233 | INFO     | job 5918011467 has completed (purged errors)
[2023-07-31 03:11:50] 2023-07-31 02:11:31,233 | INFO     | overall cleanup function is called
[2023-07-31 03:11:50] 2023-07-31 02:11:32,240 | INFO     | --- collectZombieJob: --- 10, [32296]
[2023-07-31 03:11:50] 2023-07-31 02:11:32,240 | INFO     | zombie collector trying to kill pid 32296
[2023-07-31 03:11:50] 2023-07-31 02:11:32,240 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2023-07-31 03:11:50] 2023-07-31 02:11:33,243 | INFO     | collected zombie processes
[2023-07-31 03:11:50] 2023-07-31 02:11:33,243 | INFO     | will now attempt to kill all subprocesses of pid=32296
[2023-07-31 03:11:50] 2023-07-31 02:11:33,278 | INFO     | process IDs to be killed: [32296] (in reverse order)
[2023-07-31 03:11:50] 2023-07-31 02:11:33,309 | WARNING  | found no corresponding commands to process id(s)
[2023-07-31 03:11:50] 2023-07-31 02:11:33,310 | INFO     | Do not look for orphan processes in BOINC jobs
[2023-07-31 03:11:50] 2023-07-31 02:11:33,310 | INFO     | ready for new job
[2023-07-31 03:11:50] 2023-07-31 02:11:33,310 | INFO     | pilot has finished with previous job - re-establishing logging
[2023-07-31 03:11:50] 2023-07-31 02:11:33,310 | INFO     | *************************************
[2023-07-31 03:11:50] 2023-07-31 02:11:33,311 | INFO     | ***  PanDA Pilot version 3.6.4.7  ***
[2023-07-31 03:11:50] 2023-07-31 02:11:33,311 | INFO     | *************************************
[2023-07-31 03:11:50] 2023-07-31 02:11:33,311 | INFO     | 
[2023-07-31 03:11:50] 2023-07-31 02:11:33,327 | INFO     | architecture information:
[2023-07-31 03:11:50] 2023-07-31 02:11:33,328 | INFO     | executing command: cat /etc/os-release
[2023-07-31 03:11:50] 2023-07-31 02:11:33,339 | INFO     | cat /etc/os-release:
[2023-07-31 03:11:50] NAME="CentOS Linux"
[2023-07-31 03:11:50] VERSION="7 (Core)"
[2023-07-31 03:11:50] ID="centos"
[2023-07-31 03:11:50] ID_LIKE="rhel fedora"
[2023-07-31 03:11:50] VERSION_ID="7"
[2023-07-31 03:11:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2023-07-31 03:11:50] ANSI_COLOR="0;31"
[2023-07-31 03:11:50] CPE_NAME="cpe:/o:centos:centos:7"
[2023-07-31 03:11:50] HOME_URL="https://www.centos.org/"
[2023-07-31 03:11:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2023-07-31 03:11:50] 
[2023-07-31 03:11:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2023-07-31 03:11:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2023-07-31 03:11:50] REDHAT_SUPPORT_PRODUCT="centos"
[2023-07-31 03:11:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2023-07-31 03:11:50] 
[2023-07-31 03:11:50] 2023-07-31 02:11:33,339 | INFO     | *************************************
[2023-07-31 03:11:50] 2023-07-31 02:11:33,842 | INFO     | executing command: df -mP /home/m/BOINC/slots/1
[2023-07-31 03:11:50] 2023-07-31 02:11:33,857 | INFO     | sufficient remaining disk space (424066154496 B)
[2023-07-31 03:11:50] 2023-07-31 02:11:33,857 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2023-07-31 03:11:50] 2023-07-31 02:11:33,857 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2023-07-31 03:11:50] 2023-07-31 02:11:33,857 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2023-07-31 03:11:50] 2023-07-31 02:11:33,858 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2023-07-31 03:11:50] 2023-07-31 02:11:33,858 | INFO     | aborting loop
[2023-07-31 03:11:50] 2023-07-31 02:11:34,379 | INFO     | found 0 job(s) in 20 queues
[2023-07-31 03:11:50] 2023-07-31 02:11:34,379 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2023-07-31 03:11:50] 2023-07-31 02:11:34,379 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2023-07-31 03:11:50] 2023-07-31 02:11:34,859 | INFO     | [job] job monitor thread has finished
[2023-07-31 03:11:50] 2023-07-31 02:11:34,860 | INFO     | [job] retrieve thread has finished
[2023-07-31 03:11:50] 2023-07-31 02:11:34,967 | INFO     | [job] control thread has finished
[2023-07-31 03:11:50] 2023-07-31 02:11:35,031 | INFO     | [data] control thread has finished
[2023-07-31 03:11:50] 2023-07-31 02:11:35,339 | INFO     | [job] validate thread has finished
[2023-07-31 03:11:50] 2023-07-31 02:11:35,378 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2023-07-31 03:11:50] 2023-07-31 02:11:35,383 | INFO     | [data] copytool_in thread has finished
[2023-07-31 03:11:50] 2023-07-31 02:11:35,522 | INFO     | [job] create_data_payload thread has finished
[2023-07-31 03:11:50] 2023-07-31 02:11:35,722 | INFO     | [payload] validate_pre thread has finished
[2023-07-31 03:11:50] 2023-07-31 02:11:35,822 | INFO     | [payload] failed_post thread has finished
[2023-07-31 03:11:50] 2023-07-31 02:11:35,858 | INFO     | [payload] control thread has finished
[2023-07-31 03:11:50] 2023-07-31 02:11:35,859 | INFO     | [data] copytool_out thread has finished
[2023-07-31 03:11:50] 2023-07-31 02:11:35,999 | INFO     | [payload] execute_payloads thread has finished
[2023-07-31 03:11:50] 2023-07-31 02:11:36,224 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2023-07-31 03:11:50] 2023-07-31 02:11:36,333 | INFO     | [payload] validate_post thread has finished
[2023-07-31 03:11:50] 2023-07-31 02:11:37,227 | INFO     | [job] queue monitor thread has finished
[2023-07-31 03:11:50] 2023-07-31 02:11:39,384 | INFO     | [data] queue_monitor thread has finished
[2023-07-31 03:11:50] 2023-07-31 02:11:44,703 | INFO     | job.realtimelogging is not enabled
[2023-07-31 03:11:50] 2023-07-31 02:11:45,708 | INFO     | [payload] run_realtimelog thread has finished
[2023-07-31 03:11:50] 2023-07-31 02:11:45,775 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140340573312832)>', '<ExcThread(monitor, started 140340296132352)>']
[2023-07-31 03:11:50] 2023-07-31 02:11:46,435 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2023-07-31 03:11:50] 2023-07-31 02:11:46,436 | INFO     | [monitor] control thread has ended
[2023-07-31 03:11:50] 2023-07-31 02:11:50,799 | INFO     | end of generic workflow (traces error code: 0)
[2023-07-31 03:11:50] 2023-07-31 02:11:50,799 | INFO     | traces error code: 0
[2023-07-31 03:11:50] 2023-07-31 02:11:50,800 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2023-07-31 03:11:50] 2023-07-31 02:11:50,849 [wrapper] ==== pilot stdout END ====
[2023-07-31 03:11:50] 2023-07-31 02:11:50,852 [wrapper] ==== wrapper stdout RESUME ====
[2023-07-31 03:11:50] 2023-07-31 02:11:50,855 [wrapper] pilotpid: 24871
[2023-07-31 03:11:50] 2023-07-31 02:11:50,858 [wrapper] Pilot exit status: 0
[2023-07-31 03:11:50] 2023-07-31 02:11:50,869 [wrapper] pandaids: 5918011467
[2023-07-31 03:11:50] 2023-07-31 02:11:50,875 [wrapper] apfmon messages muted
[2023-07-31 03:11:50] 2023-07-31 02:11:50,878 [wrapper] Test setup, not cleaning
[2023-07-31 03:11:50] 2023-07-31 02:11:50,881 [wrapper] ==== wrapper stdout END ====
[2023-07-31 03:11:50] 2023-07-31 02:11:50,884 [wrapper] ==== wrapper stderr END ====
[2023-07-31 03:11:50] 2023-07-31 02:11:50,891 [wrapper] wrapperexiting ec=0, duration=1237
[2023-07-31 03:11:50] 2023-07-31 02:11:50,894 [wrapper] apfmon messages muted
[2023-07-31 03:11:50]  *** Error codes and diagnostics ***
[2023-07-31 03:11:50]     "exeErrorCode": 0,
[2023-07-31 03:11:50]     "exeErrorDiag": "",
[2023-07-31 03:11:50]     "pilotErrorCode": 0,
[2023-07-31 03:11:50]     "pilotErrorDiag": "",
[2023-07-31 03:11:50]  *** Listing of results directory ***
[2023-07-31 03:11:50] total 43636
[2023-07-31 03:11:50] -rw-r--r-- 1 m m   418016 Jul 31 02:39 pilot3.tar.gz
[2023-07-31 03:11:50] -rwx------ 1 m m    27277 Jul 31 02:47 runpilot2-wrapper.sh
[2023-07-31 03:11:50] -rw-r--r-- 1 m m     4388 Jul 31 02:47 queuedata.json
[2023-07-31 03:11:50] -rw-rw-r-- 1 m m      107 Jul 31 02:50 wrapper_26015_x86_64-pc-linux-gnu
[2023-07-31 03:11:50] -rwxr-xr-x 1 m m     7986 Jul 31 02:50 run_atlas
[2023-07-31 03:11:50] -rw-rw-r-- 1 m m      112 Jul 31 02:50 job.xml
[2023-07-31 03:11:50] -rw-r--r-- 2 m m    17604 Jul 31 02:50 start_atlas.sh
[2023-07-31 03:11:50] drwxrwx--x 2 m m     4096 Jul 31 02:50 shared
[2023-07-31 03:11:50] -rw-r--r-- 2 m m   428859 Jul 31 02:50 input.tar.gz
[2023-07-31 03:11:50] -rw-rw-r-- 1 m m     5728 Jul 31 02:50 init_data.xml
[2023-07-31 03:11:50] -rw-r--r-- 2 m m 37738636 Jul 31 02:50 EVNT.04972714._000024.pool.root.1
[2023-07-31 03:11:50] -rw-rw-r-- 1 m m        0 Jul 31 02:50 boinc_lockfile
[2023-07-31 03:11:50] -rw-rw-r-- 1 m m     2752 Jul 31 02:51 pandaJob.out
[2023-07-31 03:11:50] -rw------- 1 m m      424 Jul 31 02:51 setup.sh.local
[2023-07-31 03:11:50] -rw------- 1 m m  1013182 Jul 31 02:51 agis_schedconf.cvmfs.json
[2023-07-31 03:11:50] -rw------- 1 m m  1379189 Jul 31 02:52 cric_ddmendpoints.json
[2023-07-31 03:11:50] drwx------ 4 m m     4096 Jul 31 02:53 pilot3
[2023-07-31 03:11:50] -rw------- 1 m m  1402424 Jul 31 03:05 output.1.0f92202a-d422-4a0b-9c3a-fe60a4528505_98284.pool.root
[2023-07-31 03:11:50] -rw------- 1 m m     1015 Jul 31 03:05 memory_monitor_summary.json
[2023-07-31 03:11:50] -rw-rw-r-- 1 m m      532 Jul 31 03:06 boinc_task_state.xml
[2023-07-31 03:11:50] -rw------- 1 m m   159824 Jul 31 03:09 0f92202a-d422-4a0b-9c3a-fe60a4528505_98284.1.job.log.tgz
[2023-07-31 03:11:50] -rw-rw-r-- 1 m m     8192 Jul 31 03:11 boinc_mmap_file
[2023-07-31 03:11:50] -rw-rw-r-- 1 m m       25 Jul 31 03:11 wrapper_checkpoint.txt
[2023-07-31 03:11:50] -rw------- 1 m m     6648 Jul 31 03:11 heartbeat.json
[2023-07-31 03:11:50] -rw------- 1 m m     3969 Jul 31 03:11 pilotlog.txt
[2023-07-31 03:11:50] -rw------- 1 m m   176832 Jul 31 03:11 0f92202a-d422-4a0b-9c3a-fe60a4528505_98284.1.job.log
[2023-07-31 03:11:50] -rw------- 1 m m      464 Jul 31 03:11 output.list
[2023-07-31 03:11:50] -rw-rw-r-- 1 m m      748 Jul 31 03:11 runtime_log
[2023-07-31 03:11:50] -rw------- 1 m m  1761280 Jul 31 03:11 result.tar.gz
[2023-07-31 03:11:50] -rw-rw-r-- 1 m m    11905 Jul 31 03:11 runtime_log.err
[2023-07-31 03:11:50] -rw------- 1 m m      627 Jul 31 03:11 dG9NDmMBXk3n7Olcko1bjSoqABFKDmABFKDm7AsVDmEJOKDmwlozlm.diag
[2023-07-31 03:11:50] -rw-rw-r-- 1 m m    22658 Jul 31 03:11 stderr.txt
[2023-07-31 03:11:50] HITS file was successfully produced:
[2023-07-31 03:11:50] -rw------- 1 m m 1402424 Jul 31 03:05 shared/HITS.pool.root.1
[2023-07-31 03:11:51]  *** Contents of shared directory: ***
[2023-07-31 03:11:51] total 40388
[2023-07-31 03:11:51] -rw-r--r-- 2 m m    17604 Jul 31 02:50 start_atlas.sh
[2023-07-31 03:11:51] -rw-r--r-- 2 m m   428859 Jul 31 02:50 input.tar.gz
[2023-07-31 03:11:51] -rw-r--r-- 2 m m 37738636 Jul 31 02:50 ATLAS.root_0
[2023-07-31 03:11:51] -rw------- 1 m m  1402424 Jul 31 03:05 HITS.pool.root.1
[2023-07-31 03:11:51] -rw------- 1 m m  1761280 Jul 31 03:11 result.tar.gz
03:11:52 (21191): run_atlas exited; CPU time 516.941338
03:11:52 (21191): called boinc_finish(0)

</stderr_txt>
]]>


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