Name MD7KDmoctk3n7Olcko1bjSoqABFKDmABFKDm7AsVDmgMOKDmTaj0in_0
Workunit 2322178
Created 1 Aug 2023, 1:45:12 UTC
Sent 1 Aug 2023, 1:50:11 UTC
Report deadline 8 Aug 2023, 1:50:11 UTC
Received 1 Aug 2023, 2:17:59 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 1498
Run time 25 min 15 sec
CPU time 12 min 44 sec
Validate state Valid
Credit 17.02
Device peak FLOPS 13.05 GFLOPS
Application version ATLAS Simulation v3.01 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 1.51 GB
Peak swap size 2.12 GB
Peak disk usage 81.86 MB

Stderr output

<core_client_version>7.4.25</core_client_version>
<![CDATA[
<stderr_txt>
02:51:18 (21082): wrapper (7.7.26015): starting
02:51:18 (21082): wrapper: running run_atlas (--nthreads 4)
[2023-08-01 02:51:18] Arguments: --nthreads 4
[2023-08-01 02:51:18] Threads: 4
[2023-08-01 02:51:18] Checking for CVMFS
[2023-08-01 02:51:19] Probing /cvmfs/atlas.cern.ch... OK
[2023-08-01 02:51:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2023-08-01 02:51:20] Running cvmfs_config stat atlas.cern.ch
[2023-08-01 02:51:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2023-08-01 02:51:20] 2.9.0.0 21226 0 24948 121932 3 1 3228923 4194304 0 130560 0 0 100.000 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.100.152:3128 1
[2023-08-01 02:51:20] CVMFS is ok
[2023-08-01 02:51:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2023-08-01 02:51:20] Checking for apptainer binary...
[2023-08-01 02:51:20] Using apptainer found in PATH at /usr/bin/apptainer
[2023-08-01 02:51:20] Running /usr/bin/apptainer --version
[2023-08-01 02:51:20] apptainer version 1.0.3
[2023-08-01 02:51:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2023-08-01 02:51:20] TeeC16
[2023-08-01 02:51:20] apptainer works
[2023-08-01 02:51:20] Set ATHENA_PROC_NUMBER=4
[2023-08-01 02:51:20] Set ATHENA_CORE_NUMBER=4
[2023-08-01 02:51:20] Starting ATLAS job with PandaID=5918840935
[2023-08-01 02:51:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/m/BOINC/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2023-08-01 03:16:31]  *** The last 200 lines of the pilot log: ***
[2023-08-01 03:16:31] 2023-08-01 02:15:43,044 | INFO     | monitor loop #197: job 0:5918840935 is in state 'stageout'
[2023-08-01 03:16:31] 2023-08-01 02:15:43,083 | INFO     | number of running child processes to parent process 32168: 1
[2023-08-01 03:16:31] 2023-08-01 02:15:43,083 | INFO     | maximum number of monitored processes: 5
[2023-08-01 03:16:31] 2023-08-01 02:15:45,586 | INFO     | monitor loop #198: job 0:5918840935 is in state 'stageout'
[2023-08-01 03:16:31] 2023-08-01 02:15:45,627 | INFO     | number of running child processes to parent process 32168: 1
[2023-08-01 03:16:31] 2023-08-01 02:15:45,627 | INFO     | maximum number of monitored processes: 5
[2023-08-01 03:16:31] 2023-08-01 02:15:48,130 | INFO     | monitor loop #199: job 0:5918840935 is in state 'stageout'
[2023-08-01 03:16:31] 2023-08-01 02:15:48,174 | INFO     | number of running child processes to parent process 32168: 1
[2023-08-01 03:16:31] 2023-08-01 02:15:48,175 | INFO     | maximum number of monitored processes: 5
[2023-08-01 03:16:31] 2023-08-01 02:15:50,678 | INFO     | monitor loop #200: job 0:5918840935 is in state 'stageout'
[2023-08-01 03:16:31] 2023-08-01 02:15:50,722 | INFO     | number of running child processes to parent process 32168: 1
[2023-08-01 03:16:31] 2023-08-01 02:15:50,722 | INFO     | maximum number of monitored processes: 5
[2023-08-01 03:16:31] 2023-08-01 02:15:53,225 | INFO     | monitor loop #201: job 0:5918840935 is in state 'stageout'
[2023-08-01 03:16:31] 2023-08-01 02:15:53,266 | INFO     | number of running child processes to parent process 32168: 1
[2023-08-01 03:16:31] 2023-08-01 02:15:53,266 | INFO     | maximum number of monitored processes: 5
[2023-08-01 03:16:31] 2023-08-01 02:15:55,734 | INFO     | [attempt=3/3] loading data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json
[2023-08-01 03:16:31] 2023-08-01 02:15:55,769 | INFO     | monitor loop #202: job 0:5918840935 is in state 'stageout'
[2023-08-01 03:16:31] 2023-08-01 02:15:55,770 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 778807 B
[2023-08-01 03:16:31] 2023-08-01 02:15:55,770 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 9138 B
[2023-08-01 03:16:31] 2023-08-01 02:15:55,770 | INFO     | executing command: df -mP /home/m/BOINC/slots/1
[2023-08-01 03:16:31] 2023-08-01 02:15:55,788 | INFO     | sufficient remaining disk space (423775698944 B)
[2023-08-01 03:16:31] 2023-08-01 02:15:55,788 | INFO     | work directory size check will use 61362667520 B as a max limit (10% grace limit added)
[2023-08-01 03:16:31] 2023-08-01 02:15:55,789 | INFO     | size of work directory /home/m/BOINC/slots/1/PanDA_Pilot-5918840935: 1124927 B (within 61362667520 B limit)
[2023-08-01 03:16:31] 2023-08-01 02:15:55,789 | INFO     | pfn file=/home/m/BOINC/slots/1/PanDA_Pilot-5918840935/output.1.5668841b-1108-4645-b9d7-456a34a97d74_43753.pool.root does not exist (skip from workdir size calculat
[2023-08-01 03:16:31] 2023-08-01 02:15:55,789 | INFO     | total size of present files: 0 B (workdir size: 1124927 B)
[2023-08-01 03:16:31] 2023-08-01 02:15:55,790 | INFO     | output file size check: skipping output file /home/m/BOINC/slots/1/PanDA_Pilot-5918840935/output.1.5668841b-1108-4645-b9d7-456a34a97d74_43753.pool.root since it do
[2023-08-01 03:16:31] 2023-08-01 02:15:55,827 | INFO     | number of running child processes to parent process 32168: 1
[2023-08-01 03:16:31] 2023-08-01 02:15:55,828 | INFO     | maximum number of monitored processes: 5
[2023-08-01 03:16:31] 2023-08-01 02:15:55,875 | WARNING  | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: 
[2023-08-01 03:16:31] 2023-08-01 02:15:55,875 | WARNING  | cache file=/home/m/BOINC/slots/1/agis_ddmendpoints.agis.ALL.json is not available: [Errno 2] No such file or directory: '/home/m/BOINC/slots/1/agis_ddmendpoints.ag
[2023-08-01 03:16:31] 2023-08-01 02:15:55,921 | INFO     | transferring file 5668841b-1108-4645-b9d7-456a34a97d74_43753.1.job.log.tgz from /home/m/BOINC/slots/1/PanDA_Pilot-5918840935/5668841b-1108-4645-b9d7-456a34a97d74_4
[2023-08-01 03:16:31] 2023-08-01 02:15:55,921 | INFO     | executing command: /usr/bin/env mv /home/m/BOINC/slots/1/PanDA_Pilot-5918840935/5668841b-1108-4645-b9d7-456a34a97d74_43753.1.job.log.tgz /home/m/BOINC/slots/1/5668
[2023-08-01 03:16:31] 2023-08-01 02:15:55,940 | INFO     | Adding to output.list: 5668841b-1108-4645-b9d7-456a34a97d74_43753.1.job.log.tgz davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/3d/67/5668841b-1108-
[2023-08-01 03:16:31] 2023-08-01 02:15:55,940 | INFO     | summary of transferred files:
[2023-08-01 03:16:31] 2023-08-01 02:15:55,941 | INFO     |  -- lfn=5668841b-1108-4645-b9d7-456a34a97d74_43753.1.job.log.tgz, status_code=0, status=transferred
[2023-08-01 03:16:31] 2023-08-01 02:15:55,941 | INFO     | stage-out finished correctly
[2023-08-01 03:16:31] 2023-08-01 02:15:57,127 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2023-08-01 03:16:31] 2023-08-01 02:15:58,331 | INFO     | monitor loop #203: job 0:5918840935 is in state 'finished'
[2023-08-01 03:16:31] 2023-08-01 02:15:58,331 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-08-01 03:16:31] 2023-08-01 02:15:58,936 | INFO     | job 5918840935 has state=finished
[2023-08-01 03:16:31] 2023-08-01 02:15:58,936 | INFO     | preparing for final server update for job 5918840935 in state='finished'
[2023-08-01 03:16:31] 2023-08-01 02:15:58,937 | INFO     | this job has now completed (state=finished)
[2023-08-01 03:16:31] 2023-08-01 02:15:58,937 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2023-08-01 03:16:31] 2023-08-01 02:15:58,937 | INFO     | job 5918840935 has finished - writing final server update
[2023-08-01 03:16:31] 2023-08-01 02:15:58,939 | INFO     | fitting pss+swap vs Time
[2023-08-01 03:16:31] 2023-08-01 02:15:58,939 | INFO     | current memory leak: 437.09 B/s (using 9 data points, chi2=0.03)
[2023-08-01 03:16:31] 2023-08-01 02:15:58,940 | INFO     | total number of processed events: 2 (read)
[2023-08-01 03:16:31] 2023-08-01 02:15:58,959 | INFO     | executing command: lscpu
[2023-08-01 03:16:31] 2023-08-01 02:15:58,980 | INFO     | found 2 cores (2 cores per socket, 1 sockets)
[2023-08-01 03:16:31] 2023-08-01 02:15:58,980 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2023-08-01 03:16:31] 2023-08-01 02:15:59,008 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2023-08-01 03:16:31] 2023-08-01 02:16:00,834 | INFO     | monitor loop #204: job 0:5918840935 is in state 'finished'
[2023-08-01 03:16:31] 2023-08-01 02:16:00,837 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-08-01 03:16:31] 2023-08-01 02:16:03,338 | INFO     | monitor loop #205: job 0:5918840935 is in state 'finished'
[2023-08-01 03:16:31] 2023-08-01 02:16:03,338 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-08-01 03:16:31] 2023-08-01 02:16:05,842 | INFO     | monitor loop #206: job 0:5918840935 is in state 'finished'
[2023-08-01 03:16:31] 2023-08-01 02:16:05,842 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-08-01 03:16:31] 2023-08-01 02:16:08,345 | INFO     | monitor loop #207: job 0:5918840935 is in state 'finished'
[2023-08-01 03:16:31] 2023-08-01 02:16:08,346 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-08-01 03:16:31] 2023-08-01 02:16:10,263 | INFO     | CPU arch script returned: x86-64-v2
[2023-08-01 03:16:31] 2023-08-01 02:16:10,263 | INFO     | using path: /home/m/BOINC/slots/1/PanDA_Pilot-5918840935/memory_monitor_summary.json (trf name=prmon)
[2023-08-01 03:16:31] 2023-08-01 02:16:10,264 | INFO     | extracted standard info from prmon json
[2023-08-01 03:16:31] 2023-08-01 02:16:10,264 | INFO     | extracted standard memory fields from prmon json
[2023-08-01 03:16:31] 2023-08-01 02:16:10,265 | INFO     | ..............................
[2023-08-01 03:16:31] 2023-08-01 02:16:10,265 | INFO     | . Timing measurements:
[2023-08-01 03:16:31] 2023-08-01 02:16:10,265 | INFO     | . get job = 57 s
[2023-08-01 03:16:31] 2023-08-01 02:16:10,265 | INFO     | . initial setup = 55 s
[2023-08-01 03:16:31] 2023-08-01 02:16:10,265 | INFO     | . payload setup = 7 s
[2023-08-01 03:16:31] 2023-08-01 02:16:10,265 | INFO     | . stage-in = 70 s
[2023-08-01 03:16:31] 2023-08-01 02:16:10,265 | INFO     | . payload execution = 938 s
[2023-08-01 03:16:31] 2023-08-01 02:16:10,265 | INFO     | . stage-out = 323 s
[2023-08-01 03:16:31] 2023-08-01 02:16:10,265 | INFO     | ..............................
[2023-08-01 03:16:31] 2023-08-01 02:16:10,326 | INFO     | 
[2023-08-01 03:16:31] 2023-08-01 02:16:10,327 | INFO     | job summary report
[2023-08-01 03:16:31] 2023-08-01 02:16:10,327 | INFO     | --------------------------------------------------
[2023-08-01 03:16:31] 2023-08-01 02:16:10,327 | INFO     | PanDA job id: 5918840935
[2023-08-01 03:16:31] 2023-08-01 02:16:10,327 | INFO     | task id: NULL
[2023-08-01 03:16:31] 2023-08-01 02:16:10,327 | INFO     | errors: (none)
[2023-08-01 03:16:31] 2023-08-01 02:16:10,327 | INFO     | status: LOG_TRANSFER = DONE 
[2023-08-01 03:16:31] 2023-08-01 02:16:10,327 | INFO     | pilot state: finished 
[2023-08-01 03:16:31] 2023-08-01 02:16:10,327 | INFO     | transexitcode: 0
[2023-08-01 03:16:31] 2023-08-01 02:16:10,327 | INFO     | exeerrorcode: 0
[2023-08-01 03:16:31] 2023-08-01 02:16:10,328 | INFO     | exeerrordiag: 
[2023-08-01 03:16:31] 2023-08-01 02:16:10,328 | INFO     | exitcode: 0
[2023-08-01 03:16:31] 2023-08-01 02:16:10,328 | INFO     | exitmsg: OK
[2023-08-01 03:16:31] 2023-08-01 02:16:10,328 | INFO     | cpuconsumptiontime: 779 s
[2023-08-01 03:16:31] 2023-08-01 02:16:10,328 | INFO     | nevents: 2
[2023-08-01 03:16:31] 2023-08-01 02:16:10,328 | INFO     | neventsw: 0
[2023-08-01 03:16:31] 2023-08-01 02:16:10,328 | INFO     | pid: 32168
[2023-08-01 03:16:31] 2023-08-01 02:16:10,328 | INFO     | pgrp: 32168
[2023-08-01 03:16:31] 2023-08-01 02:16:10,328 | INFO     | corecount: 4
[2023-08-01 03:16:31] 2023-08-01 02:16:10,328 | INFO     | event service: False
[2023-08-01 03:16:31] 2023-08-01 02:16:10,328 | INFO     | sizes: {0: 2468994, 1: 2470529, 12: 2470675, 23: 2470703, 33: 2470731, 44: 2470759, 55: 2470915, 65: 2470943, 75: 2471031, 76: 2471059, 949: 2491168, 1274: 2500476
[2023-08-01 03:16:31] 2023-08-01 02:16:10,329 | INFO     | --------------------------------------------------
[2023-08-01 03:16:31] 2023-08-01 02:16:10,329 | INFO     | 
[2023-08-01 03:16:31] 2023-08-01 02:16:10,329 | INFO     | executing command: ls -lF /home/m/BOINC/slots/1
[2023-08-01 03:16:31] 2023-08-01 02:16:10,348 | INFO     | queue jobs had 0 job(s) [purged]
[2023-08-01 03:16:31] 2023-08-01 02:16:10,348 | INFO     | queue payloads had 0 job(s) [purged]
[2023-08-01 03:16:31] 2023-08-01 02:16:10,348 | INFO     | queue data_in had 0 job(s) [purged]
[2023-08-01 03:16:31] 2023-08-01 02:16:10,348 | INFO     | queue data_out had 0 job(s) [purged]
[2023-08-01 03:16:31] 2023-08-01 02:16:10,349 | INFO     | queue current_data_in had 0 job(s) [purged]
[2023-08-01 03:16:31] 2023-08-01 02:16:10,349 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2023-08-01 03:16:31] 2023-08-01 02:16:10,349 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2023-08-01 03:16:31] 2023-08-01 02:16:10,349 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2023-08-01 03:16:31] 2023-08-01 02:16:10,349 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2023-08-01 03:16:31] 2023-08-01 02:16:10,349 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2023-08-01 03:16:31] 2023-08-01 02:16:10,349 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2023-08-01 03:16:31] 2023-08-01 02:16:10,349 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2023-08-01 03:16:31] 2023-08-01 02:16:10,350 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2023-08-01 03:16:31] 2023-08-01 02:16:10,350 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2023-08-01 03:16:31] 2023-08-01 02:16:10,350 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2023-08-01 03:16:31] 2023-08-01 02:16:10,350 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2023-08-01 03:16:31] 2023-08-01 02:16:10,350 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2023-08-01 03:16:31] 2023-08-01 02:16:10,350 | INFO     | queue completed_jobids has 1 job(s)
[2023-08-01 03:16:31] 2023-08-01 02:16:10,350 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2023-08-01 03:16:31] 2023-08-01 02:16:10,350 | INFO     | queue messages had 0 job(s) [purged]
[2023-08-01 03:16:31] 2023-08-01 02:16:10,351 | INFO     | job 5918840935 has completed (purged errors)
[2023-08-01 03:16:31] 2023-08-01 02:16:10,351 | INFO     | overall cleanup function is called
[2023-08-01 03:16:31] 2023-08-01 02:16:11,358 | INFO     | --- collectZombieJob: --- 10, [32168]
[2023-08-01 03:16:31] 2023-08-01 02:16:11,358 | INFO     | zombie collector trying to kill pid 32168
[2023-08-01 03:16:31] 2023-08-01 02:16:11,358 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2023-08-01 03:16:31] 2023-08-01 02:16:12,363 | INFO     | collected zombie processes
[2023-08-01 03:16:31] 2023-08-01 02:16:12,363 | INFO     | will now attempt to kill all subprocesses of pid=32168
[2023-08-01 03:16:31] 2023-08-01 02:16:12,408 | INFO     | process IDs to be killed: [32168] (in reverse order)
[2023-08-01 03:16:31] 2023-08-01 02:16:12,442 | WARNING  | found no corresponding commands to process id(s)
[2023-08-01 03:16:31] 2023-08-01 02:16:12,443 | INFO     | Do not look for orphan processes in BOINC jobs
[2023-08-01 03:16:31] 2023-08-01 02:16:12,443 | INFO     | ready for new job
[2023-08-01 03:16:31] 2023-08-01 02:16:12,443 | INFO     | pilot has finished with previous job - re-establishing logging
[2023-08-01 03:16:31] 2023-08-01 02:16:12,443 | INFO     | *************************************
[2023-08-01 03:16:31] 2023-08-01 02:16:12,444 | INFO     | ***  PanDA Pilot version 3.6.4.7  ***
[2023-08-01 03:16:31] 2023-08-01 02:16:12,444 | INFO     | *************************************
[2023-08-01 03:16:31] 2023-08-01 02:16:12,444 | INFO     | 
[2023-08-01 03:16:31] 2023-08-01 02:16:12,462 | INFO     | architecture information:
[2023-08-01 03:16:31] 2023-08-01 02:16:12,463 | INFO     | executing command: cat /etc/os-release
[2023-08-01 03:16:31] 2023-08-01 02:16:12,480 | INFO     | cat /etc/os-release:
[2023-08-01 03:16:31] NAME="CentOS Linux"
[2023-08-01 03:16:31] VERSION="7 (Core)"
[2023-08-01 03:16:31] ID="centos"
[2023-08-01 03:16:31] ID_LIKE="rhel fedora"
[2023-08-01 03:16:31] VERSION_ID="7"
[2023-08-01 03:16:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2023-08-01 03:16:31] ANSI_COLOR="0;31"
[2023-08-01 03:16:31] CPE_NAME="cpe:/o:centos:centos:7"
[2023-08-01 03:16:31] HOME_URL="https://www.centos.org/"
[2023-08-01 03:16:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2023-08-01 03:16:31] 
[2023-08-01 03:16:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2023-08-01 03:16:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2023-08-01 03:16:31] REDHAT_SUPPORT_PRODUCT="centos"
[2023-08-01 03:16:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2023-08-01 03:16:31] 
[2023-08-01 03:16:31] 2023-08-01 02:16:12,481 | INFO     | *************************************
[2023-08-01 03:16:31] 2023-08-01 02:16:12,984 | INFO     | executing command: df -mP /home/m/BOINC/slots/1
[2023-08-01 03:16:31] 2023-08-01 02:16:13,001 | INFO     | sufficient remaining disk space (423776747520 B)
[2023-08-01 03:16:31] 2023-08-01 02:16:13,002 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2023-08-01 03:16:31] 2023-08-01 02:16:13,002 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2023-08-01 03:16:31] 2023-08-01 02:16:13,002 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2023-08-01 03:16:31] 2023-08-01 02:16:13,002 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2023-08-01 03:16:31] 2023-08-01 02:16:13,003 | INFO     | found 0 job(s) in 20 queues
[2023-08-01 03:16:31] 2023-08-01 02:16:13,003 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2023-08-01 03:16:31] 2023-08-01 02:16:13,003 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2023-08-01 03:16:31] 2023-08-01 02:16:13,356 | WARNING  | job monitor detected an abort_job request (signal=None)
[2023-08-01 03:16:31] 2023-08-01 02:16:13,357 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2023-08-01 03:16:31] 2023-08-01 02:16:13,357 | INFO     | will abort loop
[2023-08-01 03:16:31] 2023-08-01 02:16:14,007 | INFO     | [job] retrieve thread has finished
[2023-08-01 03:16:31] 2023-08-01 02:16:14,022 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2023-08-01 03:16:31] 2023-08-01 02:16:14,036 | INFO     | [payload] validate_post thread has finished
[2023-08-01 03:16:31] 2023-08-01 02:16:14,342 | INFO     | [data] control thread has finished
[2023-08-01 03:16:31] 2023-08-01 02:16:14,362 | INFO     | [job] job monitor thread has finished
[2023-08-01 03:16:31] 2023-08-01 02:16:14,505 | INFO     | [payload] failed_post thread has finished
[2023-08-01 03:16:31] 2023-08-01 02:16:14,541 | INFO     | [data] copytool_in thread has finished
[2023-08-01 03:16:31] 2023-08-01 02:16:14,949 | INFO     | [job] validate thread has finished
[2023-08-01 03:16:31] 2023-08-01 02:16:15,086 | INFO     | [job] control thread has finished
[2023-08-01 03:16:31] 2023-08-01 02:16:15,098 | INFO     | [payload] execute_payloads thread has finished
[2023-08-01 03:16:31] 2023-08-01 02:16:15,099 | INFO     | [job] create_data_payload thread has finished
[2023-08-01 03:16:31] 2023-08-01 02:16:15,220 | INFO     | [payload] validate_pre thread has finished
[2023-08-01 03:16:31] 2023-08-01 02:16:15,337 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2023-08-01 03:16:31] 2023-08-01 02:16:15,362 | INFO     | [payload] control thread has finished
[2023-08-01 03:16:31] 2023-08-01 02:16:16,027 | INFO     | [data] copytool_out thread has finished
[2023-08-01 03:16:31] 2023-08-01 02:16:16,342 | INFO     | [job] queue monitor thread has finished
[2023-08-01 03:16:31] 2023-08-01 02:16:17,008 | INFO     | [data] queue_monitor thread has finished
[2023-08-01 03:16:31] 2023-08-01 02:16:23,708 | INFO     | job.realtimelogging is not enabled
[2023-08-01 03:16:31] 2023-08-01 02:16:24,713 | INFO     | [payload] run_realtimelog thread has finished
[2023-08-01 03:16:31] 2023-08-01 02:16:25,999 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140052698699584)>', '<ExcThread(monitor, started 140052281673472)>']
[2023-08-01 03:16:31] 2023-08-01 02:16:26,069 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2023-08-01 03:16:31] 2023-08-01 02:16:26,069 | INFO     | [monitor] control thread has ended
[2023-08-01 03:16:31] 2023-08-01 02:16:31,025 | INFO     | end of generic workflow (traces error code: 0)
[2023-08-01 03:16:31] 2023-08-01 02:16:31,025 | INFO     | traces error code: 0
[2023-08-01 03:16:31] 2023-08-01 02:16:31,025 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2023-08-01 03:16:31] 2023-08-01 02:16:31,076 [wrapper] ==== pilot stdout END ====
[2023-08-01 03:16:31] 2023-08-01 02:16:31,080 [wrapper] ==== wrapper stdout RESUME ====
[2023-08-01 03:16:31] 2023-08-01 02:16:31,083 [wrapper] pilotpid: 24687
[2023-08-01 03:16:31] 2023-08-01 02:16:31,087 [wrapper] Pilot exit status: 0
[2023-08-01 03:16:31] 2023-08-01 02:16:31,096 [wrapper] pandaids: 5918840935
[2023-08-01 03:16:31] 2023-08-01 02:16:31,102 [wrapper] apfmon messages muted
[2023-08-01 03:16:31] 2023-08-01 02:16:31,105 [wrapper] Test setup, not cleaning
[2023-08-01 03:16:31] 2023-08-01 02:16:31,109 [wrapper] ==== wrapper stdout END ====
[2023-08-01 03:16:31] 2023-08-01 02:16:31,112 [wrapper] ==== wrapper stderr END ====
[2023-08-01 03:16:31] 2023-08-01 02:16:31,120 [wrapper] wrapperexiting ec=0, duration=1511
[2023-08-01 03:16:31] 2023-08-01 02:16:31,125 [wrapper] apfmon messages muted
[2023-08-01 03:16:31]  *** Error codes and diagnostics ***
[2023-08-01 03:16:31]     "exeErrorCode": 0,
[2023-08-01 03:16:31]     "exeErrorDiag": "",
[2023-08-01 03:16:31]     "pilotErrorCode": 0,
[2023-08-01 03:16:31]     "pilotErrorDiag": "",
[2023-08-01 03:16:31]  *** Listing of results directory ***
[2023-08-01 03:16:31] total 44300
[2023-08-01 03:16:31] -rw-r--r-- 1 m m     4388 Aug  1 02:43 queuedata.json
[2023-08-01 03:16:31] -rw-r--r-- 1 m m   418016 Aug  1 02:43 pilot3.tar.gz
[2023-08-01 03:16:31] -rwx------ 1 m m    27277 Aug  1 02:45 runpilot2-wrapper.sh
[2023-08-01 03:16:31] -rw-rw-r-- 1 m m      107 Aug  1 02:51 wrapper_26015_x86_64-pc-linux-gnu
[2023-08-01 03:16:31] -rwxr-xr-x 1 m m     7986 Aug  1 02:51 run_atlas
[2023-08-01 03:16:31] -rw-rw-r-- 1 m m      112 Aug  1 02:51 job.xml
[2023-08-01 03:16:31] -rw-r--r-- 2 m m    17604 Aug  1 02:51 start_atlas.sh
[2023-08-01 03:16:31] drwxrwx--x 2 m m     4096 Aug  1 02:51 shared
[2023-08-01 03:16:31] -rw-r--r-- 2 m m   428863 Aug  1 02:51 input.tar.gz
[2023-08-01 03:16:31] -rw-rw-r-- 1 m m     5728 Aug  1 02:51 init_data.xml
[2023-08-01 03:16:31] -rw-r--r-- 2 m m 38184411 Aug  1 02:51 EVNT.04972714._000028.pool.root.1
[2023-08-01 03:16:31] -rw-rw-r-- 1 m m        0 Aug  1 02:51 boinc_lockfile
[2023-08-01 03:16:31] -rw-rw-r-- 1 m m     2758 Aug  1 02:51 pandaJob.out
[2023-08-01 03:16:31] -rw------- 1 m m      424 Aug  1 02:51 setup.sh.local
[2023-08-01 03:16:31] -rw------- 1 m m  1013111 Aug  1 02:51 agis_schedconf.cvmfs.json
[2023-08-01 03:16:31] -rw------- 1 m m  1379189 Aug  1 02:52 cric_ddmendpoints.json
[2023-08-01 03:16:31] drwx------ 4 m m     4096 Aug  1 02:53 pilot3
[2023-08-01 03:16:31] -rw------- 1 m m  1493283 Aug  1 03:10 output.1.5668841b-1108-4645-b9d7-456a34a97d74_43753.pool.root
[2023-08-01 03:16:31] -rw-rw-r-- 1 m m      533 Aug  1 03:10 boinc_task_state.xml
[2023-08-01 03:16:31] -rw------- 1 m m     1017 Aug  1 03:10 memory_monitor_summary.json
[2023-08-01 03:16:31] -rw------- 1 m m   161865 Aug  1 03:13 5668841b-1108-4645-b9d7-456a34a97d74_43753.1.job.log.tgz
[2023-08-01 03:16:31] -rw------- 1 m m     6669 Aug  1 03:16 heartbeat.json
[2023-08-01 03:16:31] -rw-rw-r-- 1 m m       25 Aug  1 03:16 wrapper_checkpoint.txt
[2023-08-01 03:16:31] -rw-rw-r-- 1 m m     8192 Aug  1 03:16 boinc_mmap_file
[2023-08-01 03:16:31] -rw------- 1 m m     4187 Aug  1 03:16 pilotlog.txt
[2023-08-01 03:16:31] -rw------- 1 m m   203316 Aug  1 03:16 5668841b-1108-4645-b9d7-456a34a97d74_43753.1.job.log
[2023-08-01 03:16:31] -rw------- 1 m m      464 Aug  1 03:16 output.list
[2023-08-01 03:16:31] -rw-rw-r-- 1 m m      748 Aug  1 03:16 runtime_log
[2023-08-01 03:16:31] -rw------- 1 m m  1873920 Aug  1 03:16 result.tar.gz
[2023-08-01 03:16:31] -rw-rw-r-- 1 m m    11905 Aug  1 03:16 runtime_log.err
[2023-08-01 03:16:31] -rw------- 1 m m      627 Aug  1 03:16 MD7KDmoctk3n7Olcko1bjSoqABFKDmABFKDm7AsVDmgMOKDmTaj0in.diag
[2023-08-01 03:16:31] -rw-rw-r-- 1 m m    22867 Aug  1 03:16 stderr.txt
[2023-08-01 03:16:31] HITS file was successfully produced:
[2023-08-01 03:16:31] -rw------- 1 m m 1493283 Aug  1 03:10 shared/HITS.pool.root.1
[2023-08-01 03:16:31]  *** Contents of shared directory: ***
[2023-08-01 03:16:31] total 41024
[2023-08-01 03:16:31] -rw-r--r-- 2 m m    17604 Aug  1 02:51 start_atlas.sh
[2023-08-01 03:16:31] -rw-r--r-- 2 m m   428863 Aug  1 02:51 input.tar.gz
[2023-08-01 03:16:31] -rw-r--r-- 2 m m 38184411 Aug  1 02:51 ATLAS.root_0
[2023-08-01 03:16:31] -rw------- 1 m m  1493283 Aug  1 03:10 HITS.pool.root.1
[2023-08-01 03:16:31] -rw------- 1 m m  1873920 Aug  1 03:16 result.tar.gz
03:16:32 (21082): run_atlas exited; CPU time 764.071420
03:16:32 (21082): called boinc_finish(0)

</stderr_txt>
]]>


©2024 CERN