Name | MD7KDmoctk3n7Olcko1bjSoqABFKDmABFKDm7AsVDmgMOKDmTaj0in_0 |
Workunit | 2322178 |
Created | 1 Aug 2023, 1:45:12 UTC |
Sent | 1 Aug 2023, 1:50:11 UTC |
Report deadline | 8 Aug 2023, 1:50:11 UTC |
Received | 1 Aug 2023, 2:17:59 UTC |
Server state | Over |
Outcome | Success |
Client state | Done |
Exit status | 0 (0x00000000) |
Computer ID | 1498 |
Run time | 25 min 15 sec |
CPU time | 12 min 44 sec |
Validate state | Valid |
Credit | 17.02 |
Device peak FLOPS | 13.05 GFLOPS |
Application version | ATLAS Simulation v3.01 (native_mt) x86_64-pc-linux-gnu |
Peak working set size | 1.51 GB |
Peak swap size | 2.12 GB |
Peak disk usage | 81.86 MB |
<core_client_version>7.4.25</core_client_version> <![CDATA[ <stderr_txt> 02:51:18 (21082): wrapper (7.7.26015): starting 02:51:18 (21082): wrapper: running run_atlas (--nthreads 4) [2023-08-01 02:51:18] Arguments: --nthreads 4 [2023-08-01 02:51:18] Threads: 4 [2023-08-01 02:51:18] Checking for CVMFS [2023-08-01 02:51:19] Probing /cvmfs/atlas.cern.ch... OK [2023-08-01 02:51:20] Probing /cvmfs/atlas-condb.cern.ch... OK [2023-08-01 02:51:20] Running cvmfs_config stat atlas.cern.ch [2023-08-01 02:51:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE [2023-08-01 02:51:20] 2.9.0.0 21226 0 24948 121932 3 1 3228923 4194304 0 130560 0 0 100.000 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.100.152:3128 1 [2023-08-01 02:51:20] CVMFS is ok [2023-08-01 02:51:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 [2023-08-01 02:51:20] Checking for apptainer binary... [2023-08-01 02:51:20] Using apptainer found in PATH at /usr/bin/apptainer [2023-08-01 02:51:20] Running /usr/bin/apptainer --version [2023-08-01 02:51:20] apptainer version 1.0.3 [2023-08-01 02:51:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname [2023-08-01 02:51:20] TeeC16 [2023-08-01 02:51:20] apptainer works [2023-08-01 02:51:20] Set ATHENA_PROC_NUMBER=4 [2023-08-01 02:51:20] Set ATHENA_CORE_NUMBER=4 [2023-08-01 02:51:20] Starting ATLAS job with PandaID=5918840935 [2023-08-01 02:51:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/m/BOINC/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh [2023-08-01 03:16:31] *** The last 200 lines of the pilot log: *** [2023-08-01 03:16:31] 2023-08-01 02:15:43,044 | INFO | monitor loop #197: job 0:5918840935 is in state 'stageout' [2023-08-01 03:16:31] 2023-08-01 02:15:43,083 | INFO | number of running child processes to parent process 32168: 1 [2023-08-01 03:16:31] 2023-08-01 02:15:43,083 | INFO | maximum number of monitored processes: 5 [2023-08-01 03:16:31] 2023-08-01 02:15:45,586 | INFO | monitor loop #198: job 0:5918840935 is in state 'stageout' [2023-08-01 03:16:31] 2023-08-01 02:15:45,627 | INFO | number of running child processes to parent process 32168: 1 [2023-08-01 03:16:31] 2023-08-01 02:15:45,627 | INFO | maximum number of monitored processes: 5 [2023-08-01 03:16:31] 2023-08-01 02:15:48,130 | INFO | monitor loop #199: job 0:5918840935 is in state 'stageout' [2023-08-01 03:16:31] 2023-08-01 02:15:48,174 | INFO | number of running child processes to parent process 32168: 1 [2023-08-01 03:16:31] 2023-08-01 02:15:48,175 | INFO | maximum number of monitored processes: 5 [2023-08-01 03:16:31] 2023-08-01 02:15:50,678 | INFO | monitor loop #200: job 0:5918840935 is in state 'stageout' [2023-08-01 03:16:31] 2023-08-01 02:15:50,722 | INFO | number of running child processes to parent process 32168: 1 [2023-08-01 03:16:31] 2023-08-01 02:15:50,722 | INFO | maximum number of monitored processes: 5 [2023-08-01 03:16:31] 2023-08-01 02:15:53,225 | INFO | monitor loop #201: job 0:5918840935 is in state 'stageout' [2023-08-01 03:16:31] 2023-08-01 02:15:53,266 | INFO | number of running child processes to parent process 32168: 1 [2023-08-01 03:16:31] 2023-08-01 02:15:53,266 | INFO | maximum number of monitored processes: 5 [2023-08-01 03:16:31] 2023-08-01 02:15:55,734 | INFO | [attempt=3/3] loading data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json [2023-08-01 03:16:31] 2023-08-01 02:15:55,769 | INFO | monitor loop #202: job 0:5918840935 is in state 'stageout' [2023-08-01 03:16:31] 2023-08-01 02:15:55,770 | INFO | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 778807 B [2023-08-01 03:16:31] 2023-08-01 02:15:55,770 | INFO | payload log (payload.stdout) within allowed size limit (2147483648 B): 9138 B [2023-08-01 03:16:31] 2023-08-01 02:15:55,770 | INFO | executing command: df -mP /home/m/BOINC/slots/1 [2023-08-01 03:16:31] 2023-08-01 02:15:55,788 | INFO | sufficient remaining disk space (423775698944 B) [2023-08-01 03:16:31] 2023-08-01 02:15:55,788 | INFO | work directory size check will use 61362667520 B as a max limit (10% grace limit added) [2023-08-01 03:16:31] 2023-08-01 02:15:55,789 | INFO | size of work directory /home/m/BOINC/slots/1/PanDA_Pilot-5918840935: 1124927 B (within 61362667520 B limit) [2023-08-01 03:16:31] 2023-08-01 02:15:55,789 | INFO | pfn file=/home/m/BOINC/slots/1/PanDA_Pilot-5918840935/output.1.5668841b-1108-4645-b9d7-456a34a97d74_43753.pool.root does not exist (skip from workdir size calculat [2023-08-01 03:16:31] 2023-08-01 02:15:55,789 | INFO | total size of present files: 0 B (workdir size: 1124927 B) [2023-08-01 03:16:31] 2023-08-01 02:15:55,790 | INFO | output file size check: skipping output file /home/m/BOINC/slots/1/PanDA_Pilot-5918840935/output.1.5668841b-1108-4645-b9d7-456a34a97d74_43753.pool.root since it do [2023-08-01 03:16:31] 2023-08-01 02:15:55,827 | INFO | number of running child processes to parent process 32168: 1 [2023-08-01 03:16:31] 2023-08-01 02:15:55,828 | INFO | maximum number of monitored processes: 5 [2023-08-01 03:16:31] 2023-08-01 02:15:55,875 | WARNING | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: [2023-08-01 03:16:31] 2023-08-01 02:15:55,875 | WARNING | cache file=/home/m/BOINC/slots/1/agis_ddmendpoints.agis.ALL.json is not available: [Errno 2] No such file or directory: '/home/m/BOINC/slots/1/agis_ddmendpoints.ag [2023-08-01 03:16:31] 2023-08-01 02:15:55,921 | INFO | transferring file 5668841b-1108-4645-b9d7-456a34a97d74_43753.1.job.log.tgz from /home/m/BOINC/slots/1/PanDA_Pilot-5918840935/5668841b-1108-4645-b9d7-456a34a97d74_4 [2023-08-01 03:16:31] 2023-08-01 02:15:55,921 | INFO | executing command: /usr/bin/env mv /home/m/BOINC/slots/1/PanDA_Pilot-5918840935/5668841b-1108-4645-b9d7-456a34a97d74_43753.1.job.log.tgz /home/m/BOINC/slots/1/5668 [2023-08-01 03:16:31] 2023-08-01 02:15:55,940 | INFO | Adding to output.list: 5668841b-1108-4645-b9d7-456a34a97d74_43753.1.job.log.tgz davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/3d/67/5668841b-1108- [2023-08-01 03:16:31] 2023-08-01 02:15:55,940 | INFO | summary of transferred files: [2023-08-01 03:16:31] 2023-08-01 02:15:55,941 | INFO | -- lfn=5668841b-1108-4645-b9d7-456a34a97d74_43753.1.job.log.tgz, status_code=0, status=transferred [2023-08-01 03:16:31] 2023-08-01 02:15:55,941 | INFO | stage-out finished correctly [2023-08-01 03:16:31] 2023-08-01 02:15:57,127 | INFO | finished stage-out for finished payload, adding job to finished_jobs queue [2023-08-01 03:16:31] 2023-08-01 02:15:58,331 | INFO | monitor loop #203: job 0:5918840935 is in state 'finished' [2023-08-01 03:16:31] 2023-08-01 02:15:58,331 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-08-01 03:16:31] 2023-08-01 02:15:58,936 | INFO | job 5918840935 has state=finished [2023-08-01 03:16:31] 2023-08-01 02:15:58,936 | INFO | preparing for final server update for job 5918840935 in state='finished' [2023-08-01 03:16:31] 2023-08-01 02:15:58,937 | INFO | this job has now completed (state=finished) [2023-08-01 03:16:31] 2023-08-01 02:15:58,937 | INFO | pilot will not update the server (heartbeat message will be written to file) [2023-08-01 03:16:31] 2023-08-01 02:15:58,937 | INFO | job 5918840935 has finished - writing final server update [2023-08-01 03:16:31] 2023-08-01 02:15:58,939 | INFO | fitting pss+swap vs Time [2023-08-01 03:16:31] 2023-08-01 02:15:58,939 | INFO | current memory leak: 437.09 B/s (using 9 data points, chi2=0.03) [2023-08-01 03:16:31] 2023-08-01 02:15:58,940 | INFO | total number of processed events: 2 (read) [2023-08-01 03:16:31] 2023-08-01 02:15:58,959 | INFO | executing command: lscpu [2023-08-01 03:16:31] 2023-08-01 02:15:58,980 | INFO | found 2 cores (2 cores per socket, 1 sockets) [2023-08-01 03:16:31] 2023-08-01 02:15:58,980 | INFO | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo [2023-08-01 03:16:31] 2023-08-01 02:15:59,008 | INFO | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup [2023-08-01 03:16:31] 2023-08-01 02:16:00,834 | INFO | monitor loop #204: job 0:5918840935 is in state 'finished' [2023-08-01 03:16:31] 2023-08-01 02:16:00,837 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-08-01 03:16:31] 2023-08-01 02:16:03,338 | INFO | monitor loop #205: job 0:5918840935 is in state 'finished' [2023-08-01 03:16:31] 2023-08-01 02:16:03,338 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-08-01 03:16:31] 2023-08-01 02:16:05,842 | INFO | monitor loop #206: job 0:5918840935 is in state 'finished' [2023-08-01 03:16:31] 2023-08-01 02:16:05,842 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-08-01 03:16:31] 2023-08-01 02:16:08,345 | INFO | monitor loop #207: job 0:5918840935 is in state 'finished' [2023-08-01 03:16:31] 2023-08-01 02:16:08,346 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-08-01 03:16:31] 2023-08-01 02:16:10,263 | INFO | CPU arch script returned: x86-64-v2 [2023-08-01 03:16:31] 2023-08-01 02:16:10,263 | INFO | using path: /home/m/BOINC/slots/1/PanDA_Pilot-5918840935/memory_monitor_summary.json (trf name=prmon) [2023-08-01 03:16:31] 2023-08-01 02:16:10,264 | INFO | extracted standard info from prmon json [2023-08-01 03:16:31] 2023-08-01 02:16:10,264 | INFO | extracted standard memory fields from prmon json [2023-08-01 03:16:31] 2023-08-01 02:16:10,265 | INFO | .............................. [2023-08-01 03:16:31] 2023-08-01 02:16:10,265 | INFO | . Timing measurements: [2023-08-01 03:16:31] 2023-08-01 02:16:10,265 | INFO | . get job = 57 s [2023-08-01 03:16:31] 2023-08-01 02:16:10,265 | INFO | . initial setup = 55 s [2023-08-01 03:16:31] 2023-08-01 02:16:10,265 | INFO | . payload setup = 7 s [2023-08-01 03:16:31] 2023-08-01 02:16:10,265 | INFO | . stage-in = 70 s [2023-08-01 03:16:31] 2023-08-01 02:16:10,265 | INFO | . payload execution = 938 s [2023-08-01 03:16:31] 2023-08-01 02:16:10,265 | INFO | . stage-out = 323 s [2023-08-01 03:16:31] 2023-08-01 02:16:10,265 | INFO | .............................. [2023-08-01 03:16:31] 2023-08-01 02:16:10,326 | INFO | [2023-08-01 03:16:31] 2023-08-01 02:16:10,327 | INFO | job summary report [2023-08-01 03:16:31] 2023-08-01 02:16:10,327 | INFO | -------------------------------------------------- [2023-08-01 03:16:31] 2023-08-01 02:16:10,327 | INFO | PanDA job id: 5918840935 [2023-08-01 03:16:31] 2023-08-01 02:16:10,327 | INFO | task id: NULL [2023-08-01 03:16:31] 2023-08-01 02:16:10,327 | INFO | errors: (none) [2023-08-01 03:16:31] 2023-08-01 02:16:10,327 | INFO | status: LOG_TRANSFER = DONE [2023-08-01 03:16:31] 2023-08-01 02:16:10,327 | INFO | pilot state: finished [2023-08-01 03:16:31] 2023-08-01 02:16:10,327 | INFO | transexitcode: 0 [2023-08-01 03:16:31] 2023-08-01 02:16:10,327 | INFO | exeerrorcode: 0 [2023-08-01 03:16:31] 2023-08-01 02:16:10,328 | INFO | exeerrordiag: [2023-08-01 03:16:31] 2023-08-01 02:16:10,328 | INFO | exitcode: 0 [2023-08-01 03:16:31] 2023-08-01 02:16:10,328 | INFO | exitmsg: OK [2023-08-01 03:16:31] 2023-08-01 02:16:10,328 | INFO | cpuconsumptiontime: 779 s [2023-08-01 03:16:31] 2023-08-01 02:16:10,328 | INFO | nevents: 2 [2023-08-01 03:16:31] 2023-08-01 02:16:10,328 | INFO | neventsw: 0 [2023-08-01 03:16:31] 2023-08-01 02:16:10,328 | INFO | pid: 32168 [2023-08-01 03:16:31] 2023-08-01 02:16:10,328 | INFO | pgrp: 32168 [2023-08-01 03:16:31] 2023-08-01 02:16:10,328 | INFO | corecount: 4 [2023-08-01 03:16:31] 2023-08-01 02:16:10,328 | INFO | event service: False [2023-08-01 03:16:31] 2023-08-01 02:16:10,328 | INFO | sizes: {0: 2468994, 1: 2470529, 12: 2470675, 23: 2470703, 33: 2470731, 44: 2470759, 55: 2470915, 65: 2470943, 75: 2471031, 76: 2471059, 949: 2491168, 1274: 2500476 [2023-08-01 03:16:31] 2023-08-01 02:16:10,329 | INFO | -------------------------------------------------- [2023-08-01 03:16:31] 2023-08-01 02:16:10,329 | INFO | [2023-08-01 03:16:31] 2023-08-01 02:16:10,329 | INFO | executing command: ls -lF /home/m/BOINC/slots/1 [2023-08-01 03:16:31] 2023-08-01 02:16:10,348 | INFO | queue jobs had 0 job(s) [purged] [2023-08-01 03:16:31] 2023-08-01 02:16:10,348 | INFO | queue payloads had 0 job(s) [purged] [2023-08-01 03:16:31] 2023-08-01 02:16:10,348 | INFO | queue data_in had 0 job(s) [purged] [2023-08-01 03:16:31] 2023-08-01 02:16:10,348 | INFO | queue data_out had 0 job(s) [purged] [2023-08-01 03:16:31] 2023-08-01 02:16:10,349 | INFO | queue current_data_in had 0 job(s) [purged] [2023-08-01 03:16:31] 2023-08-01 02:16:10,349 | INFO | queue validated_jobs had 0 job(s) [purged] [2023-08-01 03:16:31] 2023-08-01 02:16:10,349 | INFO | queue validated_payloads had 0 job(s) [purged] [2023-08-01 03:16:31] 2023-08-01 02:16:10,349 | INFO | queue monitored_payloads had 0 job(s) [purged] [2023-08-01 03:16:31] 2023-08-01 02:16:10,349 | INFO | queue finished_jobs had 0 job(s) [purged] [2023-08-01 03:16:31] 2023-08-01 02:16:10,349 | INFO | queue finished_payloads had 0 job(s) [purged] [2023-08-01 03:16:31] 2023-08-01 02:16:10,349 | INFO | queue finished_data_in had 1 job(s) [purged] [2023-08-01 03:16:31] 2023-08-01 02:16:10,349 | INFO | queue finished_data_out had 0 job(s) [purged] [2023-08-01 03:16:31] 2023-08-01 02:16:10,350 | INFO | queue failed_jobs had 0 job(s) [purged] [2023-08-01 03:16:31] 2023-08-01 02:16:10,350 | INFO | queue failed_payloads had 0 job(s) [purged] [2023-08-01 03:16:31] 2023-08-01 02:16:10,350 | INFO | queue failed_data_in had 0 job(s) [purged] [2023-08-01 03:16:31] 2023-08-01 02:16:10,350 | INFO | queue failed_data_out had 0 job(s) [purged] [2023-08-01 03:16:31] 2023-08-01 02:16:10,350 | INFO | queue completed_jobs had 0 job(s) [purged] [2023-08-01 03:16:31] 2023-08-01 02:16:10,350 | INFO | queue completed_jobids has 1 job(s) [2023-08-01 03:16:31] 2023-08-01 02:16:10,350 | INFO | queue realtimelog_payloads had 0 job(s) [purged] [2023-08-01 03:16:31] 2023-08-01 02:16:10,350 | INFO | queue messages had 0 job(s) [purged] [2023-08-01 03:16:31] 2023-08-01 02:16:10,351 | INFO | job 5918840935 has completed (purged errors) [2023-08-01 03:16:31] 2023-08-01 02:16:10,351 | INFO | overall cleanup function is called [2023-08-01 03:16:31] 2023-08-01 02:16:11,358 | INFO | --- collectZombieJob: --- 10, [32168] [2023-08-01 03:16:31] 2023-08-01 02:16:11,358 | INFO | zombie collector trying to kill pid 32168 [2023-08-01 03:16:31] 2023-08-01 02:16:11,358 | INFO | harmless exception when collecting zombies: [Errno 10] No child processes [2023-08-01 03:16:31] 2023-08-01 02:16:12,363 | INFO | collected zombie processes [2023-08-01 03:16:31] 2023-08-01 02:16:12,363 | INFO | will now attempt to kill all subprocesses of pid=32168 [2023-08-01 03:16:31] 2023-08-01 02:16:12,408 | INFO | process IDs to be killed: [32168] (in reverse order) [2023-08-01 03:16:31] 2023-08-01 02:16:12,442 | WARNING | found no corresponding commands to process id(s) [2023-08-01 03:16:31] 2023-08-01 02:16:12,443 | INFO | Do not look for orphan processes in BOINC jobs [2023-08-01 03:16:31] 2023-08-01 02:16:12,443 | INFO | ready for new job [2023-08-01 03:16:31] 2023-08-01 02:16:12,443 | INFO | pilot has finished with previous job - re-establishing logging [2023-08-01 03:16:31] 2023-08-01 02:16:12,443 | INFO | ************************************* [2023-08-01 03:16:31] 2023-08-01 02:16:12,444 | INFO | *** PanDA Pilot version 3.6.4.7 *** [2023-08-01 03:16:31] 2023-08-01 02:16:12,444 | INFO | ************************************* [2023-08-01 03:16:31] 2023-08-01 02:16:12,444 | INFO | [2023-08-01 03:16:31] 2023-08-01 02:16:12,462 | INFO | architecture information: [2023-08-01 03:16:31] 2023-08-01 02:16:12,463 | INFO | executing command: cat /etc/os-release [2023-08-01 03:16:31] 2023-08-01 02:16:12,480 | INFO | cat /etc/os-release: [2023-08-01 03:16:31] NAME="CentOS Linux" [2023-08-01 03:16:31] VERSION="7 (Core)" [2023-08-01 03:16:31] ID="centos" [2023-08-01 03:16:31] ID_LIKE="rhel fedora" [2023-08-01 03:16:31] VERSION_ID="7" [2023-08-01 03:16:31] PRETTY_NAME="CentOS Linux 7 (Core)" [2023-08-01 03:16:31] ANSI_COLOR="0;31" [2023-08-01 03:16:31] CPE_NAME="cpe:/o:centos:centos:7" [2023-08-01 03:16:31] HOME_URL="https://www.centos.org/" [2023-08-01 03:16:31] BUG_REPORT_URL="https://bugs.centos.org/" [2023-08-01 03:16:31] [2023-08-01 03:16:31] CENTOS_MANTISBT_PROJECT="CentOS-7" [2023-08-01 03:16:31] CENTOS_MANTISBT_PROJECT_VERSION="7" [2023-08-01 03:16:31] REDHAT_SUPPORT_PRODUCT="centos" [2023-08-01 03:16:31] REDHAT_SUPPORT_PRODUCT_VERSION="7" [2023-08-01 03:16:31] [2023-08-01 03:16:31] 2023-08-01 02:16:12,481 | INFO | ************************************* [2023-08-01 03:16:31] 2023-08-01 02:16:12,984 | INFO | executing command: df -mP /home/m/BOINC/slots/1 [2023-08-01 03:16:31] 2023-08-01 02:16:13,001 | INFO | sufficient remaining disk space (423776747520 B) [2023-08-01 03:16:31] 2023-08-01 02:16:13,002 | WARNING | since timefloor is set to 0, pilot was only allowed to run one job [2023-08-01 03:16:31] 2023-08-01 02:16:13,002 | WARNING | setting graceful_stop since proceed_with_getjob() returned False (pilot will end) [2023-08-01 03:16:31] 2023-08-01 02:16:13,002 | WARNING | data:queue_monitoring:received graceful stop - abort after this iteration [2023-08-01 03:16:31] 2023-08-01 02:16:13,002 | WARNING | aborting monitor loop since graceful_stop has been set (timing out remaining threads) [2023-08-01 03:16:31] 2023-08-01 02:16:13,003 | INFO | found 0 job(s) in 20 queues [2023-08-01 03:16:31] 2023-08-01 02:16:13,003 | WARNING | pilot monitor received instruction that args.graceful_stop has been set [2023-08-01 03:16:31] 2023-08-01 02:16:13,003 | WARNING | will wait for a maximum of 300 s for threads to finish [2023-08-01 03:16:31] 2023-08-01 02:16:13,356 | WARNING | job monitor detected an abort_job request (signal=None) [2023-08-01 03:16:31] 2023-08-01 02:16:13,357 | WARNING | job:job_monitor:received graceful stop - abort after this iteration [2023-08-01 03:16:31] 2023-08-01 02:16:13,357 | INFO | will abort loop [2023-08-01 03:16:31] 2023-08-01 02:16:14,007 | INFO | [job] retrieve thread has finished [2023-08-01 03:16:31] 2023-08-01 02:16:14,022 | WARNING | data:copytool_out:received graceful stop - abort after this iteration [2023-08-01 03:16:31] 2023-08-01 02:16:14,036 | INFO | [payload] validate_post thread has finished [2023-08-01 03:16:31] 2023-08-01 02:16:14,342 | INFO | [data] control thread has finished [2023-08-01 03:16:31] 2023-08-01 02:16:14,362 | INFO | [job] job monitor thread has finished [2023-08-01 03:16:31] 2023-08-01 02:16:14,505 | INFO | [payload] failed_post thread has finished [2023-08-01 03:16:31] 2023-08-01 02:16:14,541 | INFO | [data] copytool_in thread has finished [2023-08-01 03:16:31] 2023-08-01 02:16:14,949 | INFO | [job] validate thread has finished [2023-08-01 03:16:31] 2023-08-01 02:16:15,086 | INFO | [job] control thread has finished [2023-08-01 03:16:31] 2023-08-01 02:16:15,098 | INFO | [payload] execute_payloads thread has finished [2023-08-01 03:16:31] 2023-08-01 02:16:15,099 | INFO | [job] create_data_payload thread has finished [2023-08-01 03:16:31] 2023-08-01 02:16:15,220 | INFO | [payload] validate_pre thread has finished [2023-08-01 03:16:31] 2023-08-01 02:16:15,337 | WARNING | job:queue_monitor:received graceful stop - abort after this iteration [2023-08-01 03:16:31] 2023-08-01 02:16:15,362 | INFO | [payload] control thread has finished [2023-08-01 03:16:31] 2023-08-01 02:16:16,027 | INFO | [data] copytool_out thread has finished [2023-08-01 03:16:31] 2023-08-01 02:16:16,342 | INFO | [job] queue monitor thread has finished [2023-08-01 03:16:31] 2023-08-01 02:16:17,008 | INFO | [data] queue_monitor thread has finished [2023-08-01 03:16:31] 2023-08-01 02:16:23,708 | INFO | job.realtimelogging is not enabled [2023-08-01 03:16:31] 2023-08-01 02:16:24,713 | INFO | [payload] run_realtimelog thread has finished [2023-08-01 03:16:31] 2023-08-01 02:16:25,999 | INFO | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140052698699584)>', '<ExcThread(monitor, started 140052281673472)>'] [2023-08-01 03:16:31] 2023-08-01 02:16:26,069 | WARNING | job_aborted has been set - aborting pilot monitoring [2023-08-01 03:16:31] 2023-08-01 02:16:26,069 | INFO | [monitor] control thread has ended [2023-08-01 03:16:31] 2023-08-01 02:16:31,025 | INFO | end of generic workflow (traces error code: 0) [2023-08-01 03:16:31] 2023-08-01 02:16:31,025 | INFO | traces error code: 0 [2023-08-01 03:16:31] 2023-08-01 02:16:31,025 | INFO | pilot has finished (exit code=0, shell exit code=0) [2023-08-01 03:16:31] 2023-08-01 02:16:31,076 [wrapper] ==== pilot stdout END ==== [2023-08-01 03:16:31] 2023-08-01 02:16:31,080 [wrapper] ==== wrapper stdout RESUME ==== [2023-08-01 03:16:31] 2023-08-01 02:16:31,083 [wrapper] pilotpid: 24687 [2023-08-01 03:16:31] 2023-08-01 02:16:31,087 [wrapper] Pilot exit status: 0 [2023-08-01 03:16:31] 2023-08-01 02:16:31,096 [wrapper] pandaids: 5918840935 [2023-08-01 03:16:31] 2023-08-01 02:16:31,102 [wrapper] apfmon messages muted [2023-08-01 03:16:31] 2023-08-01 02:16:31,105 [wrapper] Test setup, not cleaning [2023-08-01 03:16:31] 2023-08-01 02:16:31,109 [wrapper] ==== wrapper stdout END ==== [2023-08-01 03:16:31] 2023-08-01 02:16:31,112 [wrapper] ==== wrapper stderr END ==== [2023-08-01 03:16:31] 2023-08-01 02:16:31,120 [wrapper] wrapperexiting ec=0, duration=1511 [2023-08-01 03:16:31] 2023-08-01 02:16:31,125 [wrapper] apfmon messages muted [2023-08-01 03:16:31] *** Error codes and diagnostics *** [2023-08-01 03:16:31] "exeErrorCode": 0, [2023-08-01 03:16:31] "exeErrorDiag": "", [2023-08-01 03:16:31] "pilotErrorCode": 0, [2023-08-01 03:16:31] "pilotErrorDiag": "", [2023-08-01 03:16:31] *** Listing of results directory *** [2023-08-01 03:16:31] total 44300 [2023-08-01 03:16:31] -rw-r--r-- 1 m m 4388 Aug 1 02:43 queuedata.json [2023-08-01 03:16:31] -rw-r--r-- 1 m m 418016 Aug 1 02:43 pilot3.tar.gz [2023-08-01 03:16:31] -rwx------ 1 m m 27277 Aug 1 02:45 runpilot2-wrapper.sh [2023-08-01 03:16:31] -rw-rw-r-- 1 m m 107 Aug 1 02:51 wrapper_26015_x86_64-pc-linux-gnu [2023-08-01 03:16:31] -rwxr-xr-x 1 m m 7986 Aug 1 02:51 run_atlas [2023-08-01 03:16:31] -rw-rw-r-- 1 m m 112 Aug 1 02:51 job.xml [2023-08-01 03:16:31] -rw-r--r-- 2 m m 17604 Aug 1 02:51 start_atlas.sh [2023-08-01 03:16:31] drwxrwx--x 2 m m 4096 Aug 1 02:51 shared [2023-08-01 03:16:31] -rw-r--r-- 2 m m 428863 Aug 1 02:51 input.tar.gz [2023-08-01 03:16:31] -rw-rw-r-- 1 m m 5728 Aug 1 02:51 init_data.xml [2023-08-01 03:16:31] -rw-r--r-- 2 m m 38184411 Aug 1 02:51 EVNT.04972714._000028.pool.root.1 [2023-08-01 03:16:31] -rw-rw-r-- 1 m m 0 Aug 1 02:51 boinc_lockfile [2023-08-01 03:16:31] -rw-rw-r-- 1 m m 2758 Aug 1 02:51 pandaJob.out [2023-08-01 03:16:31] -rw------- 1 m m 424 Aug 1 02:51 setup.sh.local [2023-08-01 03:16:31] -rw------- 1 m m 1013111 Aug 1 02:51 agis_schedconf.cvmfs.json [2023-08-01 03:16:31] -rw------- 1 m m 1379189 Aug 1 02:52 cric_ddmendpoints.json [2023-08-01 03:16:31] drwx------ 4 m m 4096 Aug 1 02:53 pilot3 [2023-08-01 03:16:31] -rw------- 1 m m 1493283 Aug 1 03:10 output.1.5668841b-1108-4645-b9d7-456a34a97d74_43753.pool.root [2023-08-01 03:16:31] -rw-rw-r-- 1 m m 533 Aug 1 03:10 boinc_task_state.xml [2023-08-01 03:16:31] -rw------- 1 m m 1017 Aug 1 03:10 memory_monitor_summary.json [2023-08-01 03:16:31] -rw------- 1 m m 161865 Aug 1 03:13 5668841b-1108-4645-b9d7-456a34a97d74_43753.1.job.log.tgz [2023-08-01 03:16:31] -rw------- 1 m m 6669 Aug 1 03:16 heartbeat.json [2023-08-01 03:16:31] -rw-rw-r-- 1 m m 25 Aug 1 03:16 wrapper_checkpoint.txt [2023-08-01 03:16:31] -rw-rw-r-- 1 m m 8192 Aug 1 03:16 boinc_mmap_file [2023-08-01 03:16:31] -rw------- 1 m m 4187 Aug 1 03:16 pilotlog.txt [2023-08-01 03:16:31] -rw------- 1 m m 203316 Aug 1 03:16 5668841b-1108-4645-b9d7-456a34a97d74_43753.1.job.log [2023-08-01 03:16:31] -rw------- 1 m m 464 Aug 1 03:16 output.list [2023-08-01 03:16:31] -rw-rw-r-- 1 m m 748 Aug 1 03:16 runtime_log [2023-08-01 03:16:31] -rw------- 1 m m 1873920 Aug 1 03:16 result.tar.gz [2023-08-01 03:16:31] -rw-rw-r-- 1 m m 11905 Aug 1 03:16 runtime_log.err [2023-08-01 03:16:31] -rw------- 1 m m 627 Aug 1 03:16 MD7KDmoctk3n7Olcko1bjSoqABFKDmABFKDm7AsVDmgMOKDmTaj0in.diag [2023-08-01 03:16:31] -rw-rw-r-- 1 m m 22867 Aug 1 03:16 stderr.txt [2023-08-01 03:16:31] HITS file was successfully produced: [2023-08-01 03:16:31] -rw------- 1 m m 1493283 Aug 1 03:10 shared/HITS.pool.root.1 [2023-08-01 03:16:31] *** Contents of shared directory: *** [2023-08-01 03:16:31] total 41024 [2023-08-01 03:16:31] -rw-r--r-- 2 m m 17604 Aug 1 02:51 start_atlas.sh [2023-08-01 03:16:31] -rw-r--r-- 2 m m 428863 Aug 1 02:51 input.tar.gz [2023-08-01 03:16:31] -rw-r--r-- 2 m m 38184411 Aug 1 02:51 ATLAS.root_0 [2023-08-01 03:16:31] -rw------- 1 m m 1493283 Aug 1 03:10 HITS.pool.root.1 [2023-08-01 03:16:31] -rw------- 1 m m 1873920 Aug 1 03:16 result.tar.gz 03:16:32 (21082): run_atlas exited; CPU time 764.071420 03:16:32 (21082): called boinc_finish(0) </stderr_txt> ]]>
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