Name | IhZKDm6Guk3n7Olcko1bjSoqABFKDmABFKDm7AsVDmmMOKDmZ8zdLo_0 |
Workunit | 2322180 |
Created | 1 Aug 2023, 2:26:58 UTC |
Sent | 1 Aug 2023, 2:31:30 UTC |
Report deadline | 8 Aug 2023, 2:31:30 UTC |
Received | 1 Aug 2023, 2:52:21 UTC |
Server state | Over |
Outcome | Success |
Client state | Done |
Exit status | 0 (0x00000000) |
Computer ID | 1498 |
Run time | 18 min 24 sec |
CPU time | 4 min 7 sec |
Validate state | Valid |
Credit | 12.45 |
Device peak FLOPS | 13.05 GFLOPS |
Application version | ATLAS Simulation v3.01 (native_mt) x86_64-pc-linux-gnu |
Peak working set size | 2.62 GB |
Peak swap size | 4.60 GB |
Peak disk usage | 80.99 MB |
<core_client_version>7.4.25</core_client_version> <![CDATA[ <stderr_txt> 03:32:36 (16327): wrapper (7.7.26015): starting 03:32:36 (16327): wrapper: running run_atlas (--nthreads 4) [2023-08-01 03:32:36] Arguments: --nthreads 4 [2023-08-01 03:32:36] Threads: 4 [2023-08-01 03:32:36] Checking for CVMFS [2023-08-01 03:32:37] Probing /cvmfs/atlas.cern.ch... OK [2023-08-01 03:32:37] Probing /cvmfs/atlas-condb.cern.ch... OK [2023-08-01 03:32:37] Running cvmfs_config stat atlas.cern.ch [2023-08-01 03:32:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE [2023-08-01 03:32:37] 2.9.0.0 16468 0 24764 121932 4 1 3229185 4194304 0 130560 0 0 100.000 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.100.152:3128 1 [2023-08-01 03:32:37] CVMFS is ok [2023-08-01 03:32:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 [2023-08-01 03:32:37] Checking for apptainer binary... [2023-08-01 03:32:37] Using apptainer found in PATH at /usr/bin/apptainer [2023-08-01 03:32:37] Running /usr/bin/apptainer --version [2023-08-01 03:32:37] apptainer version 1.0.3 [2023-08-01 03:32:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname [2023-08-01 03:32:38] TeeC16 [2023-08-01 03:32:38] apptainer works [2023-08-01 03:32:38] Set ATHENA_PROC_NUMBER=4 [2023-08-01 03:32:38] Set ATHENA_CORE_NUMBER=4 [2023-08-01 03:32:38] Starting ATLAS job with PandaID=5918857900 [2023-08-01 03:32:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/m/BOINC/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh [2023-08-01 03:50:58] *** The last 200 lines of the pilot log: *** [2023-08-01 03:50:58] 2023-08-01 02:50:06,620 | INFO | sufficient remaining disk space (423775698944 B) [2023-08-01 03:50:58] 2023-08-01 02:50:06,620 | INFO | work directory size check will use 61362667520 B as a max limit (10% grace limit added) [2023-08-01 03:50:58] 2023-08-01 02:50:06,621 | INFO | size of work directory /home/m/BOINC/slots/1/PanDA_Pilot-5918857900: 1081151 B (within 61362667520 B limit) [2023-08-01 03:50:58] 2023-08-01 02:50:06,622 | INFO | pfn file=/home/m/BOINC/slots/1/PanDA_Pilot-5918857900/output.1.3ac47daa-bb1a-4323-8a78-9b591aa05a30_37647.pool.root does not exist (skip from workdir size calculat [2023-08-01 03:50:58] 2023-08-01 02:50:06,622 | INFO | total size of present files: 0 B (workdir size: 1081151 B) [2023-08-01 03:50:58] 2023-08-01 02:50:06,622 | INFO | output file size check: skipping output file /home/m/BOINC/slots/1/PanDA_Pilot-5918857900/output.1.3ac47daa-bb1a-4323-8a78-9b591aa05a30_37647.pool.root since it do [2023-08-01 03:50:58] 2023-08-01 02:50:06,658 | INFO | number of running child processes to parent process 26710: 1 [2023-08-01 03:50:58] 2023-08-01 02:50:06,659 | INFO | maximum number of monitored processes: 5 [2023-08-01 03:50:58] 2023-08-01 02:50:09,162 | INFO | monitor loop #182: job 0:5918857900 is in state 'stageout' [2023-08-01 03:50:58] 2023-08-01 02:50:09,204 | INFO | number of running child processes to parent process 26710: 1 [2023-08-01 03:50:58] 2023-08-01 02:50:09,205 | INFO | maximum number of monitored processes: 5 [2023-08-01 03:50:58] 2023-08-01 02:50:11,708 | INFO | monitor loop #183: job 0:5918857900 is in state 'stageout' [2023-08-01 03:50:58] 2023-08-01 02:50:11,752 | INFO | number of running child processes to parent process 26710: 1 [2023-08-01 03:50:58] 2023-08-01 02:50:11,752 | INFO | maximum number of monitored processes: 5 [2023-08-01 03:50:58] 2023-08-01 02:50:14,255 | INFO | monitor loop #184: job 0:5918857900 is in state 'stageout' [2023-08-01 03:50:58] 2023-08-01 02:50:14,296 | INFO | number of running child processes to parent process 26710: 1 [2023-08-01 03:50:58] 2023-08-01 02:50:14,297 | INFO | maximum number of monitored processes: 5 [2023-08-01 03:50:58] 2023-08-01 02:50:16,800 | INFO | monitor loop #185: job 0:5918857900 is in state 'stageout' [2023-08-01 03:50:58] 2023-08-01 02:50:16,844 | INFO | number of running child processes to parent process 26710: 1 [2023-08-01 03:50:58] 2023-08-01 02:50:16,845 | INFO | maximum number of monitored processes: 5 [2023-08-01 03:50:58] 2023-08-01 02:50:19,348 | INFO | monitor loop #186: job 0:5918857900 is in state 'stageout' [2023-08-01 03:50:58] 2023-08-01 02:50:19,388 | INFO | number of running child processes to parent process 26710: 1 [2023-08-01 03:50:58] 2023-08-01 02:50:19,388 | INFO | maximum number of monitored processes: 5 [2023-08-01 03:50:58] 2023-08-01 02:50:21,891 | INFO | monitor loop #187: job 0:5918857900 is in state 'stageout' [2023-08-01 03:50:58] 2023-08-01 02:50:21,935 | INFO | number of running child processes to parent process 26710: 1 [2023-08-01 03:50:58] 2023-08-01 02:50:21,936 | INFO | maximum number of monitored processes: 5 [2023-08-01 03:50:58] 2023-08-01 02:50:24,439 | INFO | monitor loop #188: job 0:5918857900 is in state 'stageout' [2023-08-01 03:50:58] 2023-08-01 02:50:24,474 | INFO | number of running child processes to parent process 26710: 1 [2023-08-01 03:50:58] 2023-08-01 02:50:24,475 | INFO | maximum number of monitored processes: 5 [2023-08-01 03:50:58] 2023-08-01 02:50:25,373 | INFO | [attempt=3/3] loading data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json [2023-08-01 03:50:58] 2023-08-01 02:50:25,532 | WARNING | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: [2023-08-01 03:50:58] 2023-08-01 02:50:25,532 | WARNING | cache file=/home/m/BOINC/slots/1/agis_ddmendpoints.agis.ALL.json is not available: [Errno 2] No such file or directory: '/home/m/BOINC/slots/1/agis_ddmendpoints.ag [2023-08-01 03:50:58] 2023-08-01 02:50:25,580 | INFO | transferring file 3ac47daa-bb1a-4323-8a78-9b591aa05a30_37647.1.job.log.tgz from /home/m/BOINC/slots/1/PanDA_Pilot-5918857900/3ac47daa-bb1a-4323-8a78-9b591aa05a30_3 [2023-08-01 03:50:58] 2023-08-01 02:50:25,580 | INFO | executing command: /usr/bin/env mv /home/m/BOINC/slots/1/PanDA_Pilot-5918857900/3ac47daa-bb1a-4323-8a78-9b591aa05a30_37647.1.job.log.tgz /home/m/BOINC/slots/1/3ac4 [2023-08-01 03:50:58] 2023-08-01 02:50:25,600 | INFO | Adding to output.list: 3ac47daa-bb1a-4323-8a78-9b591aa05a30_37647.1.job.log.tgz davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/7f/e1/3ac47daa-bb1a- [2023-08-01 03:50:58] 2023-08-01 02:50:25,601 | INFO | summary of transferred files: [2023-08-01 03:50:58] 2023-08-01 02:50:25,601 | INFO | -- lfn=3ac47daa-bb1a-4323-8a78-9b591aa05a30_37647.1.job.log.tgz, status_code=0, status=transferred [2023-08-01 03:50:58] 2023-08-01 02:50:25,601 | INFO | stage-out finished correctly [2023-08-01 03:50:58] 2023-08-01 02:50:26,977 | INFO | monitor loop #189: job 0:5918857900 is in state 'finished' [2023-08-01 03:50:58] 2023-08-01 02:50:26,978 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-08-01 03:50:58] 2023-08-01 02:50:29,126 | INFO | finished stage-out for finished payload, adding job to finished_jobs queue [2023-08-01 03:50:58] 2023-08-01 02:50:29,249 | INFO | job 5918857900 has state=finished [2023-08-01 03:50:58] 2023-08-01 02:50:29,249 | INFO | preparing for final server update for job 5918857900 in state='finished' [2023-08-01 03:50:58] 2023-08-01 02:50:29,250 | INFO | this job has now completed (state=finished) [2023-08-01 03:50:58] 2023-08-01 02:50:29,250 | INFO | pilot will not update the server (heartbeat message will be written to file) [2023-08-01 03:50:58] 2023-08-01 02:50:29,250 | INFO | job 5918857900 has finished - writing final server update [2023-08-01 03:50:58] 2023-08-01 02:50:29,251 | WARNING | wrong length of table data, x=[1690857699.0], y=[1550258.0] (must be same and length>=4) [2023-08-01 03:50:58] 2023-08-01 02:50:29,252 | INFO | total number of processed events: 2 (read) [2023-08-01 03:50:58] 2023-08-01 02:50:29,271 | INFO | executing command: lscpu [2023-08-01 03:50:58] 2023-08-01 02:50:29,291 | INFO | found 2 cores (2 cores per socket, 1 sockets) [2023-08-01 03:50:58] 2023-08-01 02:50:29,291 | INFO | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo [2023-08-01 03:50:58] 2023-08-01 02:50:29,303 | INFO | 1060s have passed since pilot start [2023-08-01 03:50:58] 2023-08-01 02:50:29,323 | INFO | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup [2023-08-01 03:50:58] 2023-08-01 02:50:29,481 | INFO | monitor loop #190: job 0:5918857900 is in state 'finished' [2023-08-01 03:50:58] 2023-08-01 02:50:29,481 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-08-01 03:50:58] 2023-08-01 02:50:31,982 | INFO | monitor loop #191: job 0:5918857900 is in state 'finished' [2023-08-01 03:50:58] 2023-08-01 02:50:31,983 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-08-01 03:50:58] 2023-08-01 02:50:34,486 | INFO | monitor loop #192: job 0:5918857900 is in state 'finished' [2023-08-01 03:50:58] 2023-08-01 02:50:34,486 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-08-01 03:50:58] 2023-08-01 02:50:36,994 | INFO | monitor loop #193: job 0:5918857900 is in state 'finished' [2023-08-01 03:50:58] 2023-08-01 02:50:36,996 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-08-01 03:50:58] 2023-08-01 02:50:37,262 | INFO | CPU arch script returned: x86-64-v2 [2023-08-01 03:50:58] 2023-08-01 02:50:37,262 | INFO | using path: /home/m/BOINC/slots/1/PanDA_Pilot-5918857900/memory_monitor_summary.json (trf name=prmon) [2023-08-01 03:50:58] 2023-08-01 02:50:37,263 | INFO | extracted standard info from prmon json [2023-08-01 03:50:58] 2023-08-01 02:50:37,263 | INFO | extracted standard memory fields from prmon json [2023-08-01 03:50:58] 2023-08-01 02:50:37,263 | INFO | .............................. [2023-08-01 03:50:58] 2023-08-01 02:50:37,263 | INFO | . Timing measurements: [2023-08-01 03:50:58] 2023-08-01 02:50:37,263 | INFO | . get job = 66 s [2023-08-01 03:50:58] 2023-08-01 02:50:37,264 | INFO | . initial setup = 67 s [2023-08-01 03:50:58] 2023-08-01 02:50:37,264 | INFO | . payload setup = 5 s [2023-08-01 03:50:58] 2023-08-01 02:50:37,264 | INFO | . stage-in = 63 s [2023-08-01 03:50:58] 2023-08-01 02:50:37,264 | INFO | . payload execution = 464 s [2023-08-01 03:50:58] 2023-08-01 02:50:37,264 | INFO | . stage-out = 369 s [2023-08-01 03:50:58] 2023-08-01 02:50:37,264 | INFO | .............................. [2023-08-01 03:50:58] 2023-08-01 02:50:37,326 | INFO | [2023-08-01 03:50:58] 2023-08-01 02:50:37,326 | INFO | job summary report [2023-08-01 03:50:58] 2023-08-01 02:50:37,326 | INFO | -------------------------------------------------- [2023-08-01 03:50:58] 2023-08-01 02:50:37,326 | INFO | PanDA job id: 5918857900 [2023-08-01 03:50:58] 2023-08-01 02:50:37,326 | INFO | task id: NULL [2023-08-01 03:50:58] 2023-08-01 02:50:37,326 | INFO | errors: (none) [2023-08-01 03:50:58] 2023-08-01 02:50:37,326 | INFO | status: LOG_TRANSFER = DONE [2023-08-01 03:50:58] 2023-08-01 02:50:37,326 | INFO | pilot state: finished [2023-08-01 03:50:58] 2023-08-01 02:50:37,326 | INFO | transexitcode: 0 [2023-08-01 03:50:58] 2023-08-01 02:50:37,327 | INFO | exeerrorcode: 0 [2023-08-01 03:50:58] 2023-08-01 02:50:37,327 | INFO | exeerrordiag: [2023-08-01 03:50:58] 2023-08-01 02:50:37,327 | INFO | exitcode: 0 [2023-08-01 03:50:58] 2023-08-01 02:50:37,327 | INFO | exitmsg: OK [2023-08-01 03:50:58] 2023-08-01 02:50:37,327 | INFO | cpuconsumptiontime: 252 s [2023-08-01 03:50:58] 2023-08-01 02:50:37,327 | INFO | nevents: 2 [2023-08-01 03:50:58] 2023-08-01 02:50:37,327 | INFO | neventsw: 0 [2023-08-01 03:50:58] 2023-08-01 02:50:37,327 | INFO | pid: 26710 [2023-08-01 03:50:58] 2023-08-01 02:50:37,327 | INFO | pgrp: 26710 [2023-08-01 03:50:58] 2023-08-01 02:50:37,327 | INFO | corecount: 4 [2023-08-01 03:50:58] 2023-08-01 02:50:37,327 | INFO | event service: False [2023-08-01 03:50:58] 2023-08-01 02:50:37,328 | INFO | sizes: {0: 2470329, 1: 2470357, 12: 2470503, 22: 2470531, 33: 2470559, 44: 2470587, 54: 2470743, 65: 2470771, 68: 2470859, 76: 2470887, 473: 2492474, 844: 2501782, [2023-08-01 03:50:58] 2023-08-01 02:50:37,328 | INFO | -------------------------------------------------- [2023-08-01 03:50:58] 2023-08-01 02:50:37,328 | INFO | [2023-08-01 03:50:58] 2023-08-01 02:50:37,328 | INFO | executing command: ls -lF /home/m/BOINC/slots/1 [2023-08-01 03:50:58] 2023-08-01 02:50:37,349 | INFO | queue jobs had 0 job(s) [purged] [2023-08-01 03:50:58] 2023-08-01 02:50:37,349 | INFO | queue payloads had 0 job(s) [purged] [2023-08-01 03:50:58] 2023-08-01 02:50:37,349 | INFO | queue data_in had 0 job(s) [purged] [2023-08-01 03:50:58] 2023-08-01 02:50:37,350 | INFO | queue data_out had 0 job(s) [purged] [2023-08-01 03:50:58] 2023-08-01 02:50:37,350 | INFO | queue current_data_in had 0 job(s) [purged] [2023-08-01 03:50:58] 2023-08-01 02:50:37,350 | INFO | queue validated_jobs had 0 job(s) [purged] [2023-08-01 03:50:58] 2023-08-01 02:50:37,350 | INFO | queue validated_payloads had 0 job(s) [purged] [2023-08-01 03:50:58] 2023-08-01 02:50:37,350 | INFO | queue monitored_payloads had 0 job(s) [purged] [2023-08-01 03:50:58] 2023-08-01 02:50:37,350 | INFO | queue finished_jobs had 0 job(s) [purged] [2023-08-01 03:50:58] 2023-08-01 02:50:37,350 | INFO | queue finished_payloads had 0 job(s) [purged] [2023-08-01 03:50:58] 2023-08-01 02:50:37,351 | INFO | queue finished_data_in had 1 job(s) [purged] [2023-08-01 03:50:58] 2023-08-01 02:50:37,351 | INFO | queue finished_data_out had 0 job(s) [purged] [2023-08-01 03:50:58] 2023-08-01 02:50:37,351 | INFO | queue failed_jobs had 0 job(s) [purged] [2023-08-01 03:50:58] 2023-08-01 02:50:37,351 | INFO | queue failed_payloads had 0 job(s) [purged] [2023-08-01 03:50:58] 2023-08-01 02:50:37,351 | INFO | queue failed_data_in had 0 job(s) [purged] [2023-08-01 03:50:58] 2023-08-01 02:50:37,351 | INFO | queue failed_data_out had 0 job(s) [purged] [2023-08-01 03:50:58] 2023-08-01 02:50:37,351 | INFO | queue completed_jobs had 0 job(s) [purged] [2023-08-01 03:50:58] 2023-08-01 02:50:37,351 | INFO | queue completed_jobids has 1 job(s) [2023-08-01 03:50:58] 2023-08-01 02:50:37,352 | INFO | queue realtimelog_payloads had 0 job(s) [purged] [2023-08-01 03:50:58] 2023-08-01 02:50:37,352 | INFO | queue messages had 0 job(s) [purged] [2023-08-01 03:50:58] 2023-08-01 02:50:37,352 | INFO | job 5918857900 has completed (purged errors) [2023-08-01 03:50:58] 2023-08-01 02:50:37,352 | INFO | overall cleanup function is called [2023-08-01 03:50:58] 2023-08-01 02:50:38,359 | INFO | --- collectZombieJob: --- 10, [26710] [2023-08-01 03:50:58] 2023-08-01 02:50:38,359 | INFO | zombie collector trying to kill pid 26710 [2023-08-01 03:50:58] 2023-08-01 02:50:38,360 | INFO | harmless exception when collecting zombies: [Errno 10] No child processes [2023-08-01 03:50:58] 2023-08-01 02:50:39,361 | INFO | collected zombie processes [2023-08-01 03:50:58] 2023-08-01 02:50:39,361 | INFO | will now attempt to kill all subprocesses of pid=26710 [2023-08-01 03:50:58] 2023-08-01 02:50:39,407 | INFO | process IDs to be killed: [26710] (in reverse order) [2023-08-01 03:50:58] 2023-08-01 02:50:39,443 | WARNING | found no corresponding commands to process id(s) [2023-08-01 03:50:58] 2023-08-01 02:50:39,443 | INFO | Do not look for orphan processes in BOINC jobs [2023-08-01 03:50:58] 2023-08-01 02:50:39,443 | INFO | ready for new job [2023-08-01 03:50:58] 2023-08-01 02:50:39,443 | INFO | pilot has finished with previous job - re-establishing logging [2023-08-01 03:50:58] 2023-08-01 02:50:39,444 | INFO | ************************************* [2023-08-01 03:50:58] 2023-08-01 02:50:39,444 | INFO | *** PanDA Pilot version 3.6.4.7 *** [2023-08-01 03:50:58] 2023-08-01 02:50:39,444 | INFO | ************************************* [2023-08-01 03:50:58] 2023-08-01 02:50:39,444 | INFO | [2023-08-01 03:50:58] 2023-08-01 02:50:39,466 | INFO | architecture information: [2023-08-01 03:50:58] 2023-08-01 02:50:39,467 | INFO | executing command: cat /etc/os-release [2023-08-01 03:50:58] 2023-08-01 02:50:39,484 | INFO | cat /etc/os-release: [2023-08-01 03:50:58] NAME="CentOS Linux" [2023-08-01 03:50:58] VERSION="7 (Core)" [2023-08-01 03:50:58] ID="centos" [2023-08-01 03:50:58] ID_LIKE="rhel fedora" [2023-08-01 03:50:58] VERSION_ID="7" [2023-08-01 03:50:58] PRETTY_NAME="CentOS Linux 7 (Core)" [2023-08-01 03:50:58] ANSI_COLOR="0;31" [2023-08-01 03:50:58] CPE_NAME="cpe:/o:centos:centos:7" [2023-08-01 03:50:58] HOME_URL="https://www.centos.org/" [2023-08-01 03:50:58] BUG_REPORT_URL="https://bugs.centos.org/" [2023-08-01 03:50:58] [2023-08-01 03:50:58] CENTOS_MANTISBT_PROJECT="CentOS-7" [2023-08-01 03:50:58] CENTOS_MANTISBT_PROJECT_VERSION="7" [2023-08-01 03:50:58] REDHAT_SUPPORT_PRODUCT="centos" [2023-08-01 03:50:58] REDHAT_SUPPORT_PRODUCT_VERSION="7" [2023-08-01 03:50:58] [2023-08-01 03:50:58] 2023-08-01 02:50:39,484 | INFO | ************************************* [2023-08-01 03:50:58] 2023-08-01 02:50:39,987 | INFO | executing command: df -mP /home/m/BOINC/slots/1 [2023-08-01 03:50:58] 2023-08-01 02:50:40,006 | INFO | sufficient remaining disk space (423777796096 B) [2023-08-01 03:50:58] 2023-08-01 02:50:40,006 | WARNING | since timefloor is set to 0, pilot was only allowed to run one job [2023-08-01 03:50:58] 2023-08-01 02:50:40,006 | WARNING | setting graceful_stop since proceed_with_getjob() returned False (pilot will end) [2023-08-01 03:50:58] 2023-08-01 02:50:40,007 | WARNING | data:queue_monitoring:received graceful stop - abort after this iteration [2023-08-01 03:50:58] 2023-08-01 02:50:40,334 | INFO | found 0 job(s) in 20 queues [2023-08-01 03:50:58] 2023-08-01 02:50:40,334 | WARNING | pilot monitor received instruction that args.graceful_stop has been set [2023-08-01 03:50:58] 2023-08-01 02:50:40,334 | WARNING | will wait for a maximum of 300 s for threads to finish [2023-08-01 03:50:58] 2023-08-01 02:50:40,503 | WARNING | job:job_monitor:received graceful stop - abort after this iteration [2023-08-01 03:50:58] 2023-08-01 02:50:40,503 | INFO | aborting loop [2023-08-01 03:50:58] 2023-08-01 02:50:41,012 | INFO | [job] retrieve thread has finished [2023-08-01 03:50:58] 2023-08-01 02:50:41,098 | INFO | [payload] validate_post thread has finished [2023-08-01 03:50:58] 2023-08-01 02:50:41,183 | WARNING | data:copytool_out:received graceful stop - abort after this iteration [2023-08-01 03:50:58] 2023-08-01 02:50:41,434 | INFO | [payload] control thread has finished [2023-08-01 03:50:58] 2023-08-01 02:50:41,509 | INFO | [job] job monitor thread has finished [2023-08-01 03:50:58] 2023-08-01 02:50:41,957 | INFO | [job] validate thread has finished [2023-08-01 03:50:58] 2023-08-01 02:50:42,015 | INFO | [data] copytool_in thread has finished [2023-08-01 03:50:58] 2023-08-01 02:50:42,034 | INFO | [data] control thread has finished [2023-08-01 03:50:58] 2023-08-01 02:50:42,104 | INFO | [job] create_data_payload thread has finished [2023-08-01 03:50:58] 2023-08-01 02:50:42,116 | INFO | [payload] failed_post thread has finished [2023-08-01 03:50:58] 2023-08-01 02:50:42,235 | INFO | [payload] validate_pre thread has finished [2023-08-01 03:50:58] 2023-08-01 02:50:42,336 | WARNING | job:queue_monitor:received graceful stop - abort after this iteration [2023-08-01 03:50:58] 2023-08-01 02:50:42,372 | INFO | [payload] execute_payloads thread has finished [2023-08-01 03:50:58] 2023-08-01 02:50:42,444 | INFO | [job] control thread has finished [2023-08-01 03:50:58] 2023-08-01 02:50:43,188 | INFO | [data] copytool_out thread has finished [2023-08-01 03:50:58] 2023-08-01 02:50:43,341 | INFO | [job] queue monitor thread has finished [2023-08-01 03:50:58] 2023-08-01 02:50:44,012 | INFO | [data] queue_monitor thread has finished [2023-08-01 03:50:58] 2023-08-01 02:50:50,838 | INFO | job.realtimelogging is not enabled [2023-08-01 03:50:58] 2023-08-01 02:50:51,843 | INFO | [payload] run_realtimelog thread has finished [2023-08-01 03:50:58] 2023-08-01 02:50:52,884 | INFO | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140649400969024)>', '<ExcThread(monitor, started 140648753649408)>'] [2023-08-01 03:50:58] 2023-08-01 02:50:53,397 | WARNING | job_aborted has been set - aborting pilot monitoring [2023-08-01 03:50:58] 2023-08-01 02:50:53,397 | INFO | [monitor] control thread has ended [2023-08-01 03:50:58] 2023-08-01 02:50:57,910 | INFO | end of generic workflow (traces error code: 0) [2023-08-01 03:50:58] 2023-08-01 02:50:57,910 | INFO | traces error code: 0 [2023-08-01 03:50:58] 2023-08-01 02:50:57,910 | INFO | pilot has finished (exit code=0, shell exit code=0) [2023-08-01 03:50:58] 2023-08-01 02:50:57,963 [wrapper] ==== pilot stdout END ==== [2023-08-01 03:50:58] 2023-08-01 02:50:57,967 [wrapper] ==== wrapper stdout RESUME ==== [2023-08-01 03:50:58] 2023-08-01 02:50:57,972 [wrapper] pilotpid: 19936 [2023-08-01 03:50:58] 2023-08-01 02:50:57,976 [wrapper] Pilot exit status: 0 [2023-08-01 03:50:58] 2023-08-01 02:50:57,989 [wrapper] pandaids: 5918857900 [2023-08-01 03:50:58] 2023-08-01 02:50:57,998 [wrapper] apfmon messages muted [2023-08-01 03:50:58] 2023-08-01 02:50:58,003 [wrapper] Test setup, not cleaning [2023-08-01 03:50:58] 2023-08-01 02:50:58,008 [wrapper] ==== wrapper stdout END ==== [2023-08-01 03:50:58] 2023-08-01 02:50:58,013 [wrapper] ==== wrapper stderr END ==== [2023-08-01 03:50:58] 2023-08-01 02:50:58,023 [wrapper] wrapperexiting ec=0, duration=1100 [2023-08-01 03:50:58] 2023-08-01 02:50:58,028 [wrapper] apfmon messages muted [2023-08-01 03:50:58] *** Error codes and diagnostics *** [2023-08-01 03:50:58] "exeErrorCode": 0, [2023-08-01 03:50:58] "exeErrorDiag": "", [2023-08-01 03:50:58] "pilotErrorCode": 0, [2023-08-01 03:50:58] "pilotErrorDiag": "", [2023-08-01 03:50:58] *** Listing of results directory *** [2023-08-01 03:50:58] total 45072 [2023-08-01 03:50:58] -rwx------ 1 m m 27277 Aug 1 03:26 runpilot2-wrapper.sh [2023-08-01 03:50:58] -rw-r--r-- 1 m m 4388 Aug 1 03:26 queuedata.json [2023-08-01 03:50:58] -rw-r--r-- 1 m m 418016 Aug 1 03:26 pilot3.tar.gz [2023-08-01 03:50:58] -rw-rw-r-- 1 m m 107 Aug 1 03:32 wrapper_26015_x86_64-pc-linux-gnu [2023-08-01 03:50:58] -rwxr-xr-x 1 m m 7986 Aug 1 03:32 run_atlas [2023-08-01 03:50:58] -rw-rw-r-- 1 m m 112 Aug 1 03:32 job.xml [2023-08-01 03:50:58] -rw-r--r-- 2 m m 17604 Aug 1 03:32 start_atlas.sh [2023-08-01 03:50:58] drwxrwx--x 2 m m 4096 Aug 1 03:32 shared [2023-08-01 03:50:58] -rw-r--r-- 2 m m 428799 Aug 1 03:32 input.tar.gz [2023-08-01 03:50:58] -rw-rw-r-- 1 m m 5728 Aug 1 03:32 init_data.xml [2023-08-01 03:50:58] -rw-r--r-- 2 m m 37658468 Aug 1 03:32 EVNT.04972714._000029.pool.root.1 [2023-08-01 03:50:58] -rw-rw-r-- 1 m m 0 Aug 1 03:32 boinc_lockfile [2023-08-01 03:50:58] -rw-rw-r-- 1 m m 2684 Aug 1 03:32 pandaJob.out [2023-08-01 03:50:58] -rw------- 1 m m 424 Aug 1 03:32 setup.sh.local [2023-08-01 03:50:58] -rw------- 1 m m 1379189 Aug 1 03:33 cric_ddmendpoints.json [2023-08-01 03:50:58] -rw------- 1 m m 1013111 Aug 1 03:33 agis_schedconf.cvmfs.json [2023-08-01 03:50:58] drwx------ 4 m m 4096 Aug 1 03:35 pilot3 [2023-08-01 03:50:58] -rw------- 1 m m 2175864 Aug 1 03:44 output.1.3ac47daa-bb1a-4323-8a78-9b591aa05a30_37647.pool.root [2023-08-01 03:50:58] -rw------- 1 m m 1015 Aug 1 03:44 memory_monitor_summary.json [2023-08-01 03:50:58] -rw-rw-r-- 1 m m 532 Aug 1 03:44 boinc_task_state.xml [2023-08-01 03:50:58] -rw------- 1 m m 175121 Aug 1 03:46 3ac47daa-bb1a-4323-8a78-9b591aa05a30_37647.1.job.log.tgz [2023-08-01 03:50:58] -rw------- 1 m m 7063 Aug 1 03:50 heartbeat.json [2023-08-01 03:50:58] -rw-rw-r-- 1 m m 8192 Aug 1 03:50 boinc_mmap_file [2023-08-01 03:50:58] -rw-rw-r-- 1 m m 25 Aug 1 03:50 wrapper_checkpoint.txt [2023-08-01 03:50:58] -rw------- 1 m m 3969 Aug 1 03:50 pilotlog.txt [2023-08-01 03:50:58] -rw------- 1 m m 164677 Aug 1 03:50 3ac47daa-bb1a-4323-8a78-9b591aa05a30_37647.1.job.log [2023-08-01 03:50:58] -rw------- 1 m m 464 Aug 1 03:50 output.list [2023-08-01 03:50:58] -rw-rw-r-- 1 m m 748 Aug 1 03:50 runtime_log [2023-08-01 03:50:58] -rw------- 1 m m 2539520 Aug 1 03:50 result.tar.gz [2023-08-01 03:50:58] -rw-rw-r-- 1 m m 11905 Aug 1 03:50 runtime_log.err [2023-08-01 03:50:58] -rw------- 1 m m 627 Aug 1 03:50 IhZKDm6Guk3n7Olcko1bjSoqABFKDmABFKDm7AsVDmmMOKDmZ8zdLo.diag [2023-08-01 03:50:58] -rw-rw-r-- 1 m m 22815 Aug 1 03:50 stderr.txt [2023-08-01 03:50:58] HITS file was successfully produced: [2023-08-01 03:50:58] -rw------- 1 m m 2175864 Aug 1 03:44 shared/HITS.pool.root.1 [2023-08-01 03:50:58] *** Contents of shared directory: *** [2023-08-01 03:50:58] total 41824 [2023-08-01 03:50:58] -rw-r--r-- 2 m m 17604 Aug 1 03:32 start_atlas.sh [2023-08-01 03:50:58] -rw-r--r-- 2 m m 428799 Aug 1 03:32 input.tar.gz [2023-08-01 03:50:58] -rw-r--r-- 2 m m 37658468 Aug 1 03:32 ATLAS.root_0 [2023-08-01 03:50:58] -rw------- 1 m m 2175864 Aug 1 03:44 HITS.pool.root.1 [2023-08-01 03:50:58] -rw------- 1 m m 2539520 Aug 1 03:50 result.tar.gz 03:50:59 (16327): run_atlas exited; CPU time 247.861972 03:50:59 (16327): called boinc_finish(0) </stderr_txt> ]]>
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