Name 1qnNDm7bxk3n7Olcko1bjSoqABFKDmABFKDm7AsVDmSNOKDm6gNqXo_1
Workunit 2322217
Created 1 Aug 2023, 7:04:40 UTC
Sent 1 Aug 2023, 7:08:33 UTC
Report deadline 8 Aug 2023, 7:08:33 UTC
Received 1 Aug 2023, 8:40:19 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 4008
Run time 35 min 36 sec
CPU time 20 min 23 sec
Validate state Valid
Credit 29.81
Device peak FLOPS 4.48 GFLOPS
Application version ATLAS Simulation v3.01 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 1.42 GB
Peak swap size 2.12 GB
Peak disk usage 81.55 MB

Stderr output

<core_client_version>7.16.1</core_client_version>
<![CDATA[
<stderr_txt>
09:34:40 (4519): wrapper (7.7.26015): starting
09:34:40 (4519): wrapper: running run_atlas (--nthreads 1)
[2023-08-01 09:34:40] Arguments: --nthreads 1
[2023-08-01 09:34:40] Threads: 1
[2023-08-01 09:34:40] Checking for CVMFS
[2023-08-01 09:34:42] Probing /cvmfs/atlas.cern.ch... OK
[2023-08-01 09:34:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2023-08-01 09:34:43] Running cvmfs_config stat atlas.cern.ch
[2023-08-01 09:34:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2023-08-01 09:34:44] 2.6.3.0 4681 0 22680 121954 3 1 1974757 2816001 0 65024 0 0 n/a 829 2031 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://10.116.178.201:3128 1
[2023-08-01 09:34:44] CVMFS is ok
[2023-08-01 09:34:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2023-08-01 09:34:44] Checking for apptainer binary...
[2023-08-01 09:34:44] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2023-08-01 09:34:44] apptainer is not installed, using version from CVMFS
[2023-08-01 09:34:44] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2023-08-01 09:34:54] HPi7COS7
[2023-08-01 09:34:54] apptainer works
[2023-08-01 09:34:54] Starting ATLAS job with PandaID=5919004522
[2023-08-01 09:34:54] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2023-08-01 10:10:13]  *** The last 200 lines of the pilot log: ***
[2023-08-01 10:10:13] 2023-08-01 08:09:22,405 | INFO     | monitor loop #258: job 0:5919004522 is in state 'stageout'
[2023-08-01 10:10:13] 2023-08-01 08:09:22,491 | INFO     | number of running child processes to parent process 15349: 1
[2023-08-01 10:10:13] 2023-08-01 08:09:22,492 | INFO     | maximum number of monitored processes: 8
[2023-08-01 10:10:13] 2023-08-01 08:09:25,001 | INFO     | monitor loop #259: job 0:5919004522 is in state 'stageout'
[2023-08-01 10:10:13] 2023-08-01 08:09:25,078 | INFO     | number of running child processes to parent process 15349: 1
[2023-08-01 10:10:13] 2023-08-01 08:09:25,078 | INFO     | maximum number of monitored processes: 8
[2023-08-01 10:10:13] 2023-08-01 08:09:27,604 | INFO     | monitor loop #260: job 0:5919004522 is in state 'stageout'
[2023-08-01 10:10:13] 2023-08-01 08:09:27,655 | INFO     | number of running child processes to parent process 15349: 1
[2023-08-01 10:10:13] 2023-08-01 08:09:27,657 | INFO     | maximum number of monitored processes: 8
[2023-08-01 10:10:13] 2023-08-01 08:09:30,174 | INFO     | monitor loop #261: job 0:5919004522 is in state 'stageout'
[2023-08-01 10:10:13] 2023-08-01 08:09:30,256 | INFO     | number of running child processes to parent process 15349: 1
[2023-08-01 10:10:13] 2023-08-01 08:09:30,257 | INFO     | maximum number of monitored processes: 8
[2023-08-01 10:10:13] 2023-08-01 08:09:32,765 | INFO     | monitor loop #262: job 0:5919004522 is in state 'stageout'
[2023-08-01 10:10:13] 2023-08-01 08:09:32,765 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 778659 B
[2023-08-01 10:10:13] 2023-08-01 08:09:32,766 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 8851 B
[2023-08-01 10:10:13] 2023-08-01 08:09:32,766 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2023-08-01 10:10:13] 2023-08-01 08:09:32,800 | INFO     | sufficient remaining disk space (11367612416 B)
[2023-08-01 10:10:13] 2023-08-01 08:09:32,800 | INFO     | work directory size check will use 61362667520 B as a max limit (10% grace limit added)
[2023-08-01 10:10:13] 2023-08-01 08:09:32,801 | INFO     | size of work directory /var/lib/boinc/slots/1/PanDA_Pilot-5919004522: 1127842 B (within 61362667520 B limit)
[2023-08-01 10:10:13] 2023-08-01 08:09:32,801 | INFO     | pfn file=/var/lib/boinc/slots/1/PanDA_Pilot-5919004522/output.1.50b55b97-1039-4902-8e97-479fc01b3c75_96020.pool.root does not exist (skip from workdir size calcula
[2023-08-01 10:10:13] 2023-08-01 08:09:32,801 | INFO     | total size of present files: 0 B (workdir size: 1127842 B)
[2023-08-01 10:10:13] 2023-08-01 08:09:32,801 | INFO     | output file size check: skipping output file /var/lib/boinc/slots/1/PanDA_Pilot-5919004522/output.1.50b55b97-1039-4902-8e97-479fc01b3c75_96020.pool.root since it d
[2023-08-01 10:10:13] 2023-08-01 08:09:32,884 | INFO     | number of running child processes to parent process 15349: 1
[2023-08-01 10:10:13] 2023-08-01 08:09:32,884 | INFO     | maximum number of monitored processes: 8
[2023-08-01 10:10:13] 2023-08-01 08:09:33,690 | INFO     | [attempt=3/3] loading data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json
[2023-08-01 10:10:13] 2023-08-01 08:09:33,961 | WARNING  | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: 
[2023-08-01 10:10:13] 2023-08-01 08:09:33,962 | WARNING  | cache file=/var/lib/boinc/slots/1/agis_ddmendpoints.agis.ALL.json is not available: [Errno 2] No such file or directory: '/var/lib/boinc/slots/1/agis_ddmendpoints.
[2023-08-01 10:10:13] 2023-08-01 08:09:34,073 | INFO     | transferring file 50b55b97-1039-4902-8e97-479fc01b3c75_96020.1.job.log.tgz from /var/lib/boinc/slots/1/PanDA_Pilot-5919004522/50b55b97-1039-4902-8e97-479fc01b3c75_
[2023-08-01 10:10:13] 2023-08-01 08:09:34,073 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/1/PanDA_Pilot-5919004522/50b55b97-1039-4902-8e97-479fc01b3c75_96020.1.job.log.tgz /var/lib/boinc/slots/1/50
[2023-08-01 10:10:13] 2023-08-01 08:09:34,108 | INFO     | Adding to output.list: 50b55b97-1039-4902-8e97-479fc01b3c75_96020.1.job.log.tgz davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/44/40/50b55b97-1039-
[2023-08-01 10:10:13] 2023-08-01 08:09:34,109 | INFO     | summary of transferred files:
[2023-08-01 10:10:13] 2023-08-01 08:09:34,109 | INFO     |  -- lfn=50b55b97-1039-4902-8e97-479fc01b3c75_96020.1.job.log.tgz, status_code=0, status=transferred
[2023-08-01 10:10:13] 2023-08-01 08:09:34,109 | INFO     | stage-out finished correctly
[2023-08-01 10:10:13] 2023-08-01 08:09:34,234 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2023-08-01 10:10:13] 2023-08-01 08:09:35,294 | INFO     | job 5919004522 has state=finished
[2023-08-01 10:10:13] 2023-08-01 08:09:35,296 | INFO     | preparing for final server update for job 5919004522 in state='finished'
[2023-08-01 10:10:13] 2023-08-01 08:09:35,297 | INFO     | this job has now completed (state=finished)
[2023-08-01 10:10:13] 2023-08-01 08:09:35,297 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2023-08-01 10:10:13] 2023-08-01 08:09:35,297 | INFO     | job 5919004522 has finished - writing final server update
[2023-08-01 10:10:13] 2023-08-01 08:09:35,298 | INFO     | fitting pss+swap vs Time
[2023-08-01 10:10:13] 2023-08-01 08:09:35,298 | INFO     | current memory leak: 359.67 B/s (using 17 data points, chi2=0.11)
[2023-08-01 10:10:13] 2023-08-01 08:09:35,299 | INFO     | total number of processed events: 2 (read)
[2023-08-01 10:10:13] 2023-08-01 08:09:35,300 | INFO     | executing command: lscpu
[2023-08-01 10:10:13] 2023-08-01 08:09:35,319 | INFO     | found 2 cores (2 cores per socket, 1 sockets)
[2023-08-01 10:10:13] 2023-08-01 08:09:35,320 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2023-08-01 10:10:13] 2023-08-01 08:09:35,388 | INFO     | monitor loop #263: job 0:5919004522 is in state 'finished'
[2023-08-01 10:10:13] 2023-08-01 08:09:35,389 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-08-01 10:10:13] 2023-08-01 08:09:35,396 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2023-08-01 10:10:13] 2023-08-01 08:09:37,921 | INFO     | monitor loop #264: job 0:5919004522 is in state 'finished'
[2023-08-01 10:10:13] 2023-08-01 08:09:37,921 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-08-01 10:10:13] 2023-08-01 08:09:40,428 | INFO     | monitor loop #265: job 0:5919004522 is in state 'finished'
[2023-08-01 10:10:13] 2023-08-01 08:09:40,429 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-08-01 10:10:13] 2023-08-01 08:09:42,934 | INFO     | monitor loop #266: job 0:5919004522 is in state 'finished'
[2023-08-01 10:10:13] 2023-08-01 08:09:42,935 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-08-01 10:10:13] 2023-08-01 08:09:45,443 | INFO     | monitor loop #267: job 0:5919004522 is in state 'finished'
[2023-08-01 10:10:13] 2023-08-01 08:09:45,443 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-08-01 10:10:13] 2023-08-01 08:09:47,962 | INFO     | monitor loop #268: job 0:5919004522 is in state 'finished'
[2023-08-01 10:10:13] 2023-08-01 08:09:47,963 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-08-01 10:10:13] 2023-08-01 08:09:50,479 | INFO     | monitor loop #269: job 0:5919004522 is in state 'finished'
[2023-08-01 10:10:13] 2023-08-01 08:09:50,479 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-08-01 10:10:13] 2023-08-01 08:09:51,330 | INFO     | CPU arch script returned: x86-64-v2
[2023-08-01 10:10:13] 2023-08-01 08:09:51,331 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-5919004522/memory_monitor_summary.json (trf name=prmon)
[2023-08-01 10:10:13] 2023-08-01 08:09:51,332 | INFO     | extracted standard info from prmon json
[2023-08-01 10:10:13] 2023-08-01 08:09:51,332 | INFO     | extracted standard memory fields from prmon json
[2023-08-01 10:10:13] 2023-08-01 08:09:51,332 | INFO     | ..............................
[2023-08-01 10:10:13] 2023-08-01 08:09:51,332 | INFO     | . Timing measurements:
[2023-08-01 10:10:13] 2023-08-01 08:09:51,332 | INFO     | . get job = 48 s
[2023-08-01 10:10:13] 2023-08-01 08:09:51,332 | INFO     | . initial setup = 47 s
[2023-08-01 10:10:13] 2023-08-01 08:09:51,333 | INFO     | . payload setup = 34 s
[2023-08-01 10:10:13] 2023-08-01 08:09:51,333 | INFO     | . stage-in = 44 s
[2023-08-01 10:10:13] 2023-08-01 08:09:51,333 | INFO     | . payload execution = 1451 s
[2023-08-01 10:10:13] 2023-08-01 08:09:51,333 | INFO     | . stage-out = 377 s
[2023-08-01 10:10:13] 2023-08-01 08:09:51,334 | INFO     | ..............................
[2023-08-01 10:10:13] 2023-08-01 08:09:51,491 | INFO     | 
[2023-08-01 10:10:13] 2023-08-01 08:09:51,491 | INFO     | job summary report
[2023-08-01 10:10:13] 2023-08-01 08:09:51,491 | INFO     | --------------------------------------------------
[2023-08-01 10:10:13] 2023-08-01 08:09:51,491 | INFO     | PanDA job id: 5919004522
[2023-08-01 10:10:13] 2023-08-01 08:09:51,491 | INFO     | task id: NULL
[2023-08-01 10:10:13] 2023-08-01 08:09:51,491 | INFO     | errors: (none)
[2023-08-01 10:10:13] 2023-08-01 08:09:51,492 | INFO     | status: LOG_TRANSFER = DONE 
[2023-08-01 10:10:13] 2023-08-01 08:09:51,492 | INFO     | pilot state: finished 
[2023-08-01 10:10:13] 2023-08-01 08:09:51,492 | INFO     | transexitcode: 0
[2023-08-01 10:10:13] 2023-08-01 08:09:51,492 | INFO     | exeerrorcode: 0
[2023-08-01 10:10:13] 2023-08-01 08:09:51,492 | INFO     | exeerrordiag: 
[2023-08-01 10:10:13] 2023-08-01 08:09:51,492 | INFO     | exitcode: 0
[2023-08-01 10:10:13] 2023-08-01 08:09:51,492 | INFO     | exitmsg: OK
[2023-08-01 10:10:13] 2023-08-01 08:09:51,492 | INFO     | cpuconsumptiontime: 1293 s
[2023-08-01 10:10:13] 2023-08-01 08:09:51,492 | INFO     | nevents: 2
[2023-08-01 10:10:13] 2023-08-01 08:09:51,493 | INFO     | neventsw: 0
[2023-08-01 10:10:13] 2023-08-01 08:09:51,493 | INFO     | pid: 15349
[2023-08-01 10:10:13] 2023-08-01 08:09:51,493 | INFO     | pgrp: 15349
[2023-08-01 10:10:13] 2023-08-01 08:09:51,493 | INFO     | corecount: 1
[2023-08-01 10:10:13] 2023-08-01 08:09:51,493 | INFO     | event service: False
[2023-08-01 10:10:13] 2023-08-01 08:09:51,493 | INFO     | sizes: {0: 2470331, 1: 2470530, 12: 2470530, 23: 2470704, 33: 2470732, 44: 2470760, 55: 2470916, 59: 2471004, 66: 2471032, 1490: 2491119, 1869: 2500793, 1886: 2500
[2023-08-01 10:10:13] 2023-08-01 08:09:51,493 | INFO     | --------------------------------------------------
[2023-08-01 10:10:13] 2023-08-01 08:09:51,493 | INFO     | 
[2023-08-01 10:10:13] 2023-08-01 08:09:51,493 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2023-08-01 10:10:13] 2023-08-01 08:09:51,546 | INFO     | queue jobs had 0 job(s) [purged]
[2023-08-01 10:10:13] 2023-08-01 08:09:51,547 | INFO     | queue payloads had 0 job(s) [purged]
[2023-08-01 10:10:13] 2023-08-01 08:09:51,547 | INFO     | queue data_in had 0 job(s) [purged]
[2023-08-01 10:10:13] 2023-08-01 08:09:51,547 | INFO     | queue data_out had 0 job(s) [purged]
[2023-08-01 10:10:13] 2023-08-01 08:09:51,547 | INFO     | queue current_data_in had 0 job(s) [purged]
[2023-08-01 10:10:13] 2023-08-01 08:09:51,547 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2023-08-01 10:10:13] 2023-08-01 08:09:51,547 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2023-08-01 10:10:13] 2023-08-01 08:09:51,547 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2023-08-01 10:10:13] 2023-08-01 08:09:51,547 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2023-08-01 10:10:13] 2023-08-01 08:09:51,547 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2023-08-01 10:10:13] 2023-08-01 08:09:51,548 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2023-08-01 10:10:13] 2023-08-01 08:09:51,548 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2023-08-01 10:10:13] 2023-08-01 08:09:51,548 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2023-08-01 10:10:13] 2023-08-01 08:09:51,548 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2023-08-01 10:10:13] 2023-08-01 08:09:51,548 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2023-08-01 10:10:13] 2023-08-01 08:09:51,548 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2023-08-01 10:10:13] 2023-08-01 08:09:51,548 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2023-08-01 10:10:13] 2023-08-01 08:09:51,548 | INFO     | queue completed_jobids has 1 job(s)
[2023-08-01 10:10:13] 2023-08-01 08:09:51,548 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2023-08-01 10:10:13] 2023-08-01 08:09:51,548 | INFO     | queue messages had 0 job(s) [purged]
[2023-08-01 10:10:13] 2023-08-01 08:09:51,548 | INFO     | job 5919004522 has completed (purged errors)
[2023-08-01 10:10:13] 2023-08-01 08:09:51,549 | INFO     | overall cleanup function is called
[2023-08-01 10:10:13] 2023-08-01 08:09:52,558 | INFO     | --- collectZombieJob: --- 10, [15349]
[2023-08-01 10:10:13] 2023-08-01 08:09:52,558 | INFO     | zombie collector trying to kill pid 15349
[2023-08-01 10:10:13] 2023-08-01 08:09:52,558 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2023-08-01 10:10:13] 2023-08-01 08:09:53,575 | INFO     | collected zombie processes
[2023-08-01 10:10:13] 2023-08-01 08:09:53,576 | INFO     | will now attempt to kill all subprocesses of pid=15349
[2023-08-01 10:10:13] 2023-08-01 08:09:53,681 | INFO     | process IDs to be killed: [15349] (in reverse order)
[2023-08-01 10:10:13] 2023-08-01 08:09:53,724 | WARNING  | found no corresponding commands to process id(s)
[2023-08-01 10:10:13] 2023-08-01 08:09:53,725 | INFO     | Do not look for orphan processes in BOINC jobs
[2023-08-01 10:10:13] 2023-08-01 08:09:53,726 | INFO     | ready for new job
[2023-08-01 10:10:13] 2023-08-01 08:09:53,727 | INFO     | pilot has finished with previous job - re-establishing logging
[2023-08-01 10:10:13] 2023-08-01 08:09:53,730 | INFO     | *************************************
[2023-08-01 10:10:13] 2023-08-01 08:09:53,731 | INFO     | ***  PanDA Pilot version 3.6.4.7  ***
[2023-08-01 10:10:13] 2023-08-01 08:09:53,732 | INFO     | *************************************
[2023-08-01 10:10:13] 2023-08-01 08:09:53,732 | INFO     | 
[2023-08-01 10:10:13] 2023-08-01 08:09:53,733 | INFO     | pilot is running in a VM
[2023-08-01 10:10:13] 2023-08-01 08:09:53,733 | INFO     | architecture information:
[2023-08-01 10:10:13] 2023-08-01 08:09:53,736 | INFO     | executing command: cat /etc/os-release
[2023-08-01 10:10:13] 2023-08-01 08:09:53,797 | INFO     | cat /etc/os-release:
[2023-08-01 10:10:13] NAME="CentOS Linux"
[2023-08-01 10:10:13] VERSION="7 (Core)"
[2023-08-01 10:10:13] ID="centos"
[2023-08-01 10:10:13] ID_LIKE="rhel fedora"
[2023-08-01 10:10:13] VERSION_ID="7"
[2023-08-01 10:10:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2023-08-01 10:10:13] ANSI_COLOR="0;31"
[2023-08-01 10:10:13] CPE_NAME="cpe:/o:centos:centos:7"
[2023-08-01 10:10:13] HOME_URL="https://www.centos.org/"
[2023-08-01 10:10:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2023-08-01 10:10:13] 
[2023-08-01 10:10:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2023-08-01 10:10:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2023-08-01 10:10:13] REDHAT_SUPPORT_PRODUCT="centos"
[2023-08-01 10:10:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2023-08-01 10:10:13] 
[2023-08-01 10:10:13] 2023-08-01 08:09:53,797 | INFO     | *************************************
[2023-08-01 10:10:13] 2023-08-01 08:09:54,309 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2023-08-01 10:10:13] 2023-08-01 08:09:54,343 | INFO     | sufficient remaining disk space (11369709568 B)
[2023-08-01 10:10:13] 2023-08-01 08:09:54,344 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2023-08-01 10:10:13] 2023-08-01 08:09:54,344 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2023-08-01 10:10:13] 2023-08-01 08:09:54,344 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2023-08-01 10:10:13] 2023-08-01 08:09:54,344 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2023-08-01 10:10:13] 2023-08-01 08:09:54,344 | INFO     | aborting loop
[2023-08-01 10:10:13] 2023-08-01 08:09:54,839 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2023-08-01 10:10:13] 2023-08-01 08:09:55,064 | INFO     | found 0 job(s) in 20 queues
[2023-08-01 10:10:13] 2023-08-01 08:09:55,064 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2023-08-01 10:10:13] 2023-08-01 08:09:55,064 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2023-08-01 10:10:13] 2023-08-01 08:09:55,358 | INFO     | [job] retrieve thread has finished
[2023-08-01 10:10:13] 2023-08-01 08:09:55,359 | INFO     | [job] job monitor thread has finished
[2023-08-01 10:10:13] 2023-08-01 08:09:55,391 | INFO     | [data] control thread has finished
[2023-08-01 10:10:13] 2023-08-01 08:09:55,520 | INFO     | [data] copytool_in thread has finished
[2023-08-01 10:10:13] 2023-08-01 08:09:55,576 | INFO     | [job] validate thread has finished
[2023-08-01 10:10:13] 2023-08-01 08:09:55,641 | INFO     | [job] control thread has finished
[2023-08-01 10:10:13] 2023-08-01 08:09:55,787 | INFO     | [payload] validate_post thread has finished
[2023-08-01 10:10:13] 2023-08-01 08:09:56,150 | INFO     | [payload] control thread has finished
[2023-08-01 10:10:13] 2023-08-01 08:09:56,331 | INFO     | [payload] failed_post thread has finished
[2023-08-01 10:10:13] 2023-08-01 08:09:56,508 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2023-08-01 10:10:13] 2023-08-01 08:09:56,520 | INFO     | [job] create_data_payload thread has finished
[2023-08-01 10:10:13] 2023-08-01 08:09:56,652 | INFO     | [payload] execute_payloads thread has finished
[2023-08-01 10:10:13] 2023-08-01 08:09:56,669 | INFO     | [payload] validate_pre thread has finished
[2023-08-01 10:10:13] 2023-08-01 08:09:56,861 | INFO     | [data] copytool_out thread has finished
[2023-08-01 10:10:13] 2023-08-01 08:09:57,518 | INFO     | [job] queue monitor thread has finished
[2023-08-01 10:10:13] 2023-08-01 08:09:58,364 | INFO     | [data] queue_monitor thread has finished
[2023-08-01 10:10:13] 2023-08-01 08:10:04,759 | INFO     | job.realtimelogging is not enabled
[2023-08-01 10:10:13] 2023-08-01 08:10:05,770 | INFO     | [payload] run_realtimelog thread has finished
[2023-08-01 10:10:13] 2023-08-01 08:10:07,449 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139803407488832)>', '<ExcThread(monitor, started 139803208103680)>']
[2023-08-01 10:10:13] 2023-08-01 08:10:08,182 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2023-08-01 10:10:13] 2023-08-01 08:10:08,182 | INFO     | [monitor] control thread has ended
[2023-08-01 10:10:13] 2023-08-01 08:10:12,474 | INFO     | end of generic workflow (traces error code: 0)
[2023-08-01 10:10:13] 2023-08-01 08:10:12,474 | INFO     | traces error code: 0
[2023-08-01 10:10:13] 2023-08-01 08:10:12,474 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2023-08-01 10:10:13] 2023-08-01 08:10:12,593 [wrapper] ==== pilot stdout END ====
[2023-08-01 10:10:13] 2023-08-01 08:10:12,596 [wrapper] ==== wrapper stdout RESUME ====
[2023-08-01 10:10:13] 2023-08-01 08:10:12,600 [wrapper] pilotpid: 8153
[2023-08-01 10:10:13] 2023-08-01 08:10:12,608 [wrapper] Pilot exit status: 0
[2023-08-01 10:10:13] 2023-08-01 08:10:12,654 [wrapper] pandaids: 5919004522
[2023-08-01 10:10:13] 2023-08-01 08:10:12,700 [wrapper] apfmon messages muted
[2023-08-01 10:10:13] 2023-08-01 08:10:12,707 [wrapper] Test setup, not cleaning
[2023-08-01 10:10:13] 2023-08-01 08:10:12,729 [wrapper] ==== wrapper stdout END ====
[2023-08-01 10:10:13] 2023-08-01 08:10:12,740 [wrapper] ==== wrapper stderr END ====
[2023-08-01 10:10:13] 2023-08-01 08:10:12,784 [wrapper] wrapperexiting ec=0, duration=2118
[2023-08-01 10:10:13] 2023-08-01 08:10:12,793 [wrapper] apfmon messages muted
[2023-08-01 10:10:13]  *** Error codes and diagnostics ***
[2023-08-01 10:10:13]     "exeErrorCode": 0,
[2023-08-01 10:10:13]     "exeErrorDiag": "",
[2023-08-01 10:10:13]     "pilotErrorCode": 0,
[2023-08-01 10:10:13]     "pilotErrorDiag": "",
[2023-08-01 10:10:13]  *** Listing of results directory ***
[2023-08-01 10:10:13] insgesamt 44372
[2023-08-01 10:10:13] -rw-r--r--. 1 boinc boinc   418016  1. Aug 07:30 pilot3.tar.gz
[2023-08-01 10:10:13] -rwx------. 1 boinc boinc    27277  1. Aug 08:00 runpilot2-wrapper.sh
[2023-08-01 10:10:13] -rw-r--r--. 1 boinc boinc     4388  1. Aug 08:00 queuedata.json
[2023-08-01 10:10:13] -rw-r--r--. 1 boinc boinc      107  1. Aug 09:34 wrapper_26015_x86_64-pc-linux-gnu
[2023-08-01 10:10:13] -rwxr-xr-x. 1 boinc boinc     7986  1. Aug 09:34 run_atlas
[2023-08-01 10:10:13] -rw-r--r--. 1 boinc boinc      112  1. Aug 09:34 job.xml
[2023-08-01 10:10:13] -rw-r--r--. 2 boinc boinc    17604  1. Aug 09:34 start_atlas.sh
[2023-08-01 10:10:13] drwxrwx--x. 2 boinc boinc       68  1. Aug 09:34 shared
[2023-08-01 10:10:13] -rw-r--r--. 2 boinc boinc   428864  1. Aug 09:34 input.tar.gz
[2023-08-01 10:10:13] -rw-r--r--. 1 boinc boinc     6047  1. Aug 09:34 init_data.xml
[2023-08-01 10:10:13] -rw-r--r--. 2 boinc boinc 38184411  1. Aug 09:34 EVNT.04972714._000028.pool.root.1
[2023-08-01 10:10:13] -rw-r--r--. 1 boinc boinc        0  1. Aug 09:34 boinc_lockfile
[2023-08-01 10:10:13] -rw-r--r--. 1 boinc boinc     2758  1. Aug 09:34 pandaJob.out
[2023-08-01 10:10:13] -rw-------. 1 boinc boinc      424  1. Aug 09:34 setup.sh.local
[2023-08-01 10:10:13] -rw-------. 1 boinc boinc  1013021  1. Aug 09:35 agis_schedconf.cvmfs.json
[2023-08-01 10:10:13] -rw-------. 1 boinc boinc  1379189  1. Aug 09:36 cric_ddmendpoints.json
[2023-08-01 10:10:13] drwx------. 4 boinc boinc     4096  1. Aug 09:37 pilot3
[2023-08-01 10:10:13] -rw-------. 1 boinc boinc  1493291  1. Aug 10:03 output.1.50b55b97-1039-4902-8e97-479fc01b3c75_96020.pool.root
[2023-08-01 10:10:13] -rw-------. 1 boinc boinc     1020  1. Aug 10:03 memory_monitor_summary.json
[2023-08-01 10:10:13] -rw-r--r--. 1 boinc boinc      534  1. Aug 10:03 boinc_task_state.xml
[2023-08-01 10:10:13] -rw-------. 1 boinc boinc   164504  1. Aug 10:06 50b55b97-1039-4902-8e97-479fc01b3c75_96020.1.job.log.tgz
[2023-08-01 10:10:13] -rw-------. 1 boinc boinc     6691  1. Aug 10:09 heartbeat.json
[2023-08-01 10:10:13] -rw-------. 1 boinc boinc     4031  1. Aug 10:10 pilotlog.txt
[2023-08-01 10:10:13] -rw-------. 1 boinc boinc   241905  1. Aug 10:10 50b55b97-1039-4902-8e97-479fc01b3c75_96020.1.job.log
[2023-08-01 10:10:13] -rw-------. 1 boinc boinc      464  1. Aug 10:10 output.list
[2023-08-01 10:10:13] -rw-r--r--. 1 boinc boinc      748  1. Aug 10:10 runtime_log
[2023-08-01 10:10:13] -rw-------. 1 boinc boinc  1914880  1. Aug 10:10 result.tar.gz
[2023-08-01 10:10:13] -rw-r--r--. 1 boinc boinc    11822  1. Aug 10:10 runtime_log.err
[2023-08-01 10:10:13] -rw-------. 1 boinc boinc      636  1. Aug 10:10 1qnNDm7bxk3n7Olcko1bjSoqABFKDmABFKDm7AsVDmSNOKDm6gNqXo.diag
[2023-08-01 10:10:13] -rw-r--r--. 1 boinc boinc     8192  1. Aug 10:10 boinc_mmap_file
[2023-08-01 10:10:13] -rw-r--r--. 1 boinc boinc       26  1. Aug 10:10 wrapper_checkpoint.txt
[2023-08-01 10:10:13] -rw-r--r--. 1 boinc boinc    22898  1. Aug 10:10 stderr.txt
[2023-08-01 10:10:13] HITS file was successfully produced:
[2023-08-01 10:10:13] -rw-------. 1 boinc boinc 1493291  1. Aug 10:03 shared/HITS.pool.root.1
[2023-08-01 10:10:13]  *** Contents of shared directory: ***
[2023-08-01 10:10:13] insgesamt 41064
[2023-08-01 10:10:13] -rw-r--r--. 2 boinc boinc    17604  1. Aug 09:34 start_atlas.sh
[2023-08-01 10:10:13] -rw-r--r--. 2 boinc boinc   428864  1. Aug 09:34 input.tar.gz
[2023-08-01 10:10:13] -rw-r--r--. 2 boinc boinc 38184411  1. Aug 09:34 ATLAS.root_0
[2023-08-01 10:10:13] -rw-------. 1 boinc boinc  1493291  1. Aug 10:03 HITS.pool.root.1
[2023-08-01 10:10:13] -rw-------. 1 boinc boinc  1914880  1. Aug 10:10 result.tar.gz
10:10:15 (4519): run_atlas exited; CPU time 1223.912862
10:10:15 (4519): called boinc_finish(0)

</stderr_txt>
]]>


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