Name | Ob1LDmkSHl3n7Olcko1bjSoqABFKDmABFKDm7AsVDmeROKDmy0MF0n_0 |
Workunit | 2322448 |
Created | 2 Aug 2023, 3:12:24 UTC |
Sent | 2 Aug 2023, 3:16:29 UTC |
Report deadline | 9 Aug 2023, 3:16:29 UTC |
Received | 2 Aug 2023, 3:47:14 UTC |
Server state | Over |
Outcome | Success |
Client state | Done |
Exit status | 0 (0x00000000) |
Computer ID | 1498 |
Run time | 28 min 32 sec |
CPU time | 11 min 44 sec |
Validate state | Valid |
Credit | 19.41 |
Device peak FLOPS | 13.05 GFLOPS |
Application version | ATLAS Simulation v3.01 (native_mt) x86_64-pc-linux-gnu |
Peak working set size | 1.51 GB |
Peak swap size | 4.68 GB |
Peak disk usage | 95.82 MB |
<core_client_version>7.4.25</core_client_version> <![CDATA[ <stderr_txt> 04:17:40 (18114): wrapper (7.7.26015): starting 04:17:40 (18114): wrapper: running run_atlas (--nthreads 4) [2023-08-02 04:17:40] Arguments: --nthreads 4 [2023-08-02 04:17:40] Threads: 4 [2023-08-02 04:17:40] Checking for CVMFS [2023-08-02 04:17:42] Probing /cvmfs/atlas.cern.ch... OK [2023-08-02 04:17:43] Probing /cvmfs/atlas-condb.cern.ch... OK [2023-08-02 04:17:43] Running cvmfs_config stat atlas.cern.ch [2023-08-02 04:17:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE [2023-08-02 04:17:43] 2.9.0.0 18257 0 24716 121982 3 1 3955219 4194305 0 130560 0 0 0.000 829 536 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.100.152:3128 1 [2023-08-02 04:17:43] CVMFS is ok [2023-08-02 04:17:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 [2023-08-02 04:17:43] Checking for apptainer binary... [2023-08-02 04:17:43] Using apptainer found in PATH at /usr/bin/apptainer [2023-08-02 04:17:43] Running /usr/bin/apptainer --version [2023-08-02 04:17:43] apptainer version 1.0.3 [2023-08-02 04:17:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname [2023-08-02 04:17:43] TeeC16 [2023-08-02 04:17:43] apptainer works [2023-08-02 04:17:43] Set ATHENA_PROC_NUMBER=4 [2023-08-02 04:17:43] Set ATHENA_CORE_NUMBER=4 [2023-08-02 04:17:43] Starting ATLAS job with PandaID=5920021018 [2023-08-02 04:17:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/m/BOINC/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh [2023-08-02 04:46:10] *** The last 200 lines of the pilot log: *** [2023-08-02 04:46:10] Requested: cpu_flags ... [2023-08-02 04:46:10] Setting up [4mcpuflags 0.1.0[0m ... [2023-08-02 04:46:10] >>>>>>>>>>>>>>>>>>>>>>>>> Information for user <<<<<<<<<<<<<<<<<<<<<<<<< [2023-08-02 04:46:10] ************************************************************************ [2023-08-02 04:46:10] x86-64-v2 [2023-08-02 04:46:10] 2023-08-02 03:45:50,466 | INFO | pilot.user.atlas.utilities | get_cpu_arch | CPU arch script returned: x86-64-v2 [2023-08-02 04:46:10] 2023-08-02 03:45:50,466 | DEBUG | pilot.control.job | get_data_structure | cpu arch=x86-64-v2 [2023-08-02 04:46:10] 2023-08-02 03:45:50,466 | INFO | pilot.user.atlas.utilities | get_memory_values | using path: /home/m/BOINC/slots/0/PanDA_Pilot-5920021018/memory_monitor_summary.json (trf name=prmon [2023-08-02 04:46:10] 2023-08-02 03:45:50,467 | DEBUG | pilot.user.atlas.utilities | get_memory_monitor_info | summary_dictionary={'Avg': {'nprocs': 4.937, 'nthreads': 5.875, 'pss': 1281550.0, 'rchar': 64121809. [2023-08-02 04:46:10] 2023-08-02 03:45:50,468 | INFO | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard info from prmon json [2023-08-02 04:46:10] 2023-08-02 03:45:50,468 | INFO | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard memory fields from prmon json [2023-08-02 04:46:10] 2023-08-02 03:45:50,468 | INFO | pilot.util.timing | timing_report | .............................. [2023-08-02 04:46:10] 2023-08-02 03:45:50,468 | INFO | pilot.util.timing | timing_report | . Timing measurements: [2023-08-02 04:46:10] 2023-08-02 03:45:50,468 | INFO | pilot.util.timing | timing_report | . get job = 67 s [2023-08-02 04:46:10] 2023-08-02 03:45:50,468 | INFO | pilot.util.timing | timing_report | . initial setup = 84 s [2023-08-02 04:46:10] 2023-08-02 03:45:50,468 | INFO | pilot.util.timing | timing_report | . payload setup = 50 s [2023-08-02 04:46:10] 2023-08-02 03:45:50,468 | INFO | pilot.util.timing | timing_report | . stage-in = 47 s [2023-08-02 04:46:10] 2023-08-02 03:45:50,468 | INFO | pilot.util.timing | timing_report | . payload execution = 950 s [2023-08-02 04:46:10] 2023-08-02 03:45:50,468 | INFO | pilot.util.timing | timing_report | . stage-out = 445 s [2023-08-02 04:46:10] 2023-08-02 03:45:50,469 | INFO | pilot.util.timing | timing_report | .............................. [2023-08-02 04:46:10] 2023-08-02 03:45:50,469 | DEBUG | pilot.control.job | send_state | data={'jobId': '5920021018', 'state': 'finished', 'timestamp': '2023-08-02T04:45:38+00:00', 'siteNam [2023-08-02 04:46:10] 2023-08-02 03:45:50,470 | DEBUG | pilot.control.job | write_heartbeat_to_file | heartbeat dictionary: {'jobId': '5920021018', 'state': 'finished', 'timestamp': '2023-08-02T04:45:38 [2023-08-02 04:46:10] 2023-08-02 03:45:50,470 | DEBUG | pilot.control.job | write_heartbeat_to_file | wrote heartbeat to file: /home/m/BOINC/slots/0/heartbeat.json [2023-08-02 04:46:10] 2023-08-02 03:45:50,470 | DEBUG | pilot.control.job | queue_monitor | job.completed=False [2023-08-02 04:46:10] 2023-08-02 03:45:50,532 | INFO | pilot.control.job | make_job_report | [2023-08-02 04:46:10] 2023-08-02 03:45:50,532 | INFO | pilot.control.job | make_job_report | job summary report [2023-08-02 04:46:10] 2023-08-02 03:45:50,532 | INFO | pilot.control.job | make_job_report | -------------------------------------------------- [2023-08-02 04:46:10] 2023-08-02 03:45:50,532 | INFO | pilot.control.job | make_job_report | PanDA job id: 5920021018 [2023-08-02 04:46:10] 2023-08-02 03:45:50,532 | INFO | pilot.control.job | make_job_report | task id: NULL [2023-08-02 04:46:10] 2023-08-02 03:45:50,532 | INFO | pilot.control.job | make_job_report | errors: (none) [2023-08-02 04:46:10] 2023-08-02 03:45:50,532 | INFO | pilot.control.job | make_job_report | status: LOG_TRANSFER = DONE [2023-08-02 04:46:10] 2023-08-02 03:45:50,533 | INFO | pilot.control.job | make_job_report | pilot state: finished [2023-08-02 04:46:10] 2023-08-02 03:45:50,533 | INFO | pilot.control.job | make_job_report | transexitcode: 0 [2023-08-02 04:46:10] 2023-08-02 03:45:50,533 | INFO | pilot.control.job | make_job_report | exeerrorcode: 0 [2023-08-02 04:46:10] 2023-08-02 03:45:50,533 | INFO | pilot.control.job | make_job_report | exeerrordiag: [2023-08-02 04:46:10] 2023-08-02 03:45:50,533 | INFO | pilot.control.job | make_job_report | exitcode: 0 [2023-08-02 04:46:10] 2023-08-02 03:45:50,533 | INFO | pilot.control.job | make_job_report | exitmsg: OK [2023-08-02 04:46:10] 2023-08-02 03:45:50,533 | INFO | pilot.control.job | make_job_report | cpuconsumptiontime: 719 s [2023-08-02 04:46:10] 2023-08-02 03:45:50,533 | INFO | pilot.control.job | make_job_report | nevents: 2 [2023-08-02 04:46:10] 2023-08-02 03:45:50,533 | INFO | pilot.control.job | make_job_report | neventsw: 0 [2023-08-02 04:46:10] 2023-08-02 03:45:50,534 | INFO | pilot.control.job | make_job_report | pid: 28919 [2023-08-02 04:46:10] 2023-08-02 03:45:50,534 | INFO | pilot.control.job | make_job_report | pgrp: 28919 [2023-08-02 04:46:10] 2023-08-02 03:45:50,534 | INFO | pilot.control.job | make_job_report | corecount: 4 [2023-08-02 04:46:10] 2023-08-02 03:45:50,534 | INFO | pilot.control.job | make_job_report | event service: False [2023-08-02 04:46:10] 2023-08-02 03:45:50,534 | INFO | pilot.control.job | make_job_report | sizes: {0: 2470304, 11: 2470450, 22: 2470478, 32: 2470506, 43: 2470534, 52: 2470622, 53: 2470778, 10 [2023-08-02 04:46:10] 2023-08-02 03:45:50,534 | INFO | pilot.control.job | make_job_report | -------------------------------------------------- [2023-08-02 04:46:10] 2023-08-02 03:45:50,534 | INFO | pilot.control.job | make_job_report | [2023-08-02 04:46:10] 2023-08-02 03:45:50,534 | DEBUG | pilot.control.job | has_job_completed | ls -lF /home/m/BOINC/slots/0: [2023-08-02 04:46:10] [2023-08-02 04:46:10] 2023-08-02 03:45:50,534 | INFO | pilot.util.container | print_executable | executing command: ls -lF /home/m/BOINC/slots/0 [2023-08-02 04:46:10] 2023-08-02 03:45:50,552 | DEBUG | pilot.control.job | has_job_completed | total 45896 [2023-08-02 04:46:10] -rw------- 1 m m 625562 Aug 2 04:45 31bbc036-daa6-4ba1-8de2-392166ce8664_22250.1.job.log [2023-08-02 04:46:10] -rw------- 1 m m 181784 Aug 2 04:41 31bbc036-daa6-4ba1-8de2-392166ce8664_22250.1.job.log.tgz [2023-08-02 04:46:10] -rw-r--r-- 2 m m 39611081 Aug 2 04:17 EVNT.04972714._000022.pool.root.1 [2023-08-02 04:46:10] -rw------- 1 m m 129 Aug 2 04:17 Ob1LDmkSHl3n7Olcko1bjSoqABFKDmABFKDm7AsVDmeROKDmy0MF0n.diag [2023-08-02 04:46:10] drwxrwx--- 2 m m 4096 Aug 2 04:45 PanDA_Pilot-5920021018/ [2023-08-02 04:46:10] -rw------- 1 m m 1013361 Aug 2 04:19 agis_schedconf.cvmfs.json [2023-08-02 04:46:10] -rw-rw-r-- 1 m m 0 Aug 2 04:17 boinc_lockfile [2023-08-02 04:46:10] -rw-rw-r-- 1 m m 8192 Aug 2 04:45 boinc_mmap_file [2023-08-02 04:46:10] -rw-rw-r-- 1 m m 533 Aug 2 04:38 boinc_task_state.xml [2023-08-02 04:46:10] -rw------- 1 m m 1379189 Aug 2 04:19 cric_ddmendpoints.json [2023-08-02 04:46:10] -rw------- 1 m m 7390 Aug 2 04:45 heartbeat.json [2023-08-02 04:46:10] -rw-rw-r-- 1 m m 5728 Aug 2 04:17 init_data.xml [2023-08-02 04:46:10] -rw-r--r-- 2 m m 926786 Aug 2 04:17 input.tar.gz [2023-08-02 04:46:10] -rw-rw-r-- 1 m m 112 Aug 2 04:17 job.xml [2023-08-02 04:46:10] -rw------- 1 m m 1018 Aug 2 04:38 memory_monitor_summary.json [2023-08-02 04:46:10] -rw------- 1 m m 1549092 Aug 2 04:38 output.1.31bbc036-daa6-4ba1-8de2-392166ce8664_22250.pool.root [2023-08-02 04:46:10] -rw------- 1 m m 464 Aug 2 04:45 output.list [2023-08-02 04:46:10] -rw-rw-r-- 1 m m 2664 Aug 2 04:17 pandaJob.out [2023-08-02 04:46:10] drwx------ 5 m m 4096 Aug 2 04:20 pilot3/ [2023-08-02 04:46:10] -rw------- 1 m m 917375 Aug 2 04:12 pilot3.tar.gz [2023-08-02 04:46:10] -rw------- 1 m m 610489 Aug 2 04:45 pilotlog.txt [2023-08-02 04:46:10] -rw-r--r-- 1 m m 4388 Aug 2 04:11 queuedata.json [2023-08-02 04:46:10] -rwxr-xr-x 1 m m 7986 Aug 2 04:17 run_atlas* [2023-08-02 04:46:10] -rwx------ 1 m m 27275 Aug 2 04:12 runpilot2-wrapper.sh* [2023-08-02 04:46:10] -rw-rw-r-- 1 m m 407 Aug 2 04:17 runtime_log [2023-08-02 04:46:10] -rw-rw-r-- 1 m m 7699 Aug 2 04:17 runtime_log.err [2023-08-02 04:46:10] -rw------- 1 m m 424 Aug 2 04:17 setup.sh.local [2023-08-02 04:46:10] drwxrwx--x 2 m m 4096 Aug 2 04:17 shared/ [2023-08-02 04:46:10] -rw-r--r-- 2 m m 17632 Aug 2 04:17 start_atlas.sh [2023-08-02 04:46:10] -rw-rw-r-- 1 m m 1718 Aug 2 04:17 stderr.txt [2023-08-02 04:46:10] -rw-rw-r-- 1 m m 107 Aug 2 04:17 wrapper_26015_x86_64-pc-linux-gnu [2023-08-02 04:46:10] -rw-rw-r-- 1 m m 25 Aug 2 04:45 wrapper_checkpoint.txt [2023-08-02 04:46:10] 2023-08-02 03:45:50,553 | INFO | pilot.util.queuehandling | queue_report | queue jobs had 0 job(s) [purged] [2023-08-02 04:46:10] 2023-08-02 03:45:50,553 | INFO | pilot.util.queuehandling | queue_report | queue payloads had 0 job(s) [purged] [2023-08-02 04:46:10] 2023-08-02 03:45:50,553 | INFO | pilot.util.queuehandling | queue_report | queue data_in had 0 job(s) [purged] [2023-08-02 04:46:10] 2023-08-02 03:45:50,553 | INFO | pilot.util.queuehandling | queue_report | queue data_out had 0 job(s) [purged] [2023-08-02 04:46:10] 2023-08-02 03:45:50,553 | INFO | pilot.util.queuehandling | queue_report | queue current_data_in had 0 job(s) [purged] [2023-08-02 04:46:10] 2023-08-02 03:45:50,553 | INFO | pilot.util.queuehandling | queue_report | queue validated_jobs had 0 job(s) [purged] [2023-08-02 04:46:10] 2023-08-02 03:45:50,553 | INFO | pilot.util.queuehandling | queue_report | queue validated_payloads had 0 job(s) [purged] [2023-08-02 04:46:10] 2023-08-02 03:45:50,553 | INFO | pilot.util.queuehandling | queue_report | queue monitored_payloads had 0 job(s) [purged] [2023-08-02 04:46:10] 2023-08-02 03:45:50,553 | INFO | pilot.util.queuehandling | queue_report | queue finished_jobs had 0 job(s) [purged] [2023-08-02 04:46:10] 2023-08-02 03:45:50,554 | INFO | pilot.util.queuehandling | queue_report | queue finished_payloads had 0 job(s) [purged] [2023-08-02 04:46:10] 2023-08-02 03:45:50,554 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_in had 1 job(s) [purged] [2023-08-02 04:46:10] 2023-08-02 03:45:50,554 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_out had 0 job(s) [purged] [2023-08-02 04:46:10] 2023-08-02 03:45:50,554 | INFO | pilot.util.queuehandling | queue_report | queue failed_jobs had 0 job(s) [purged] [2023-08-02 04:46:10] 2023-08-02 03:45:50,554 | INFO | pilot.util.queuehandling | queue_report | queue failed_payloads had 0 job(s) [purged] [2023-08-02 04:46:10] 2023-08-02 03:45:50,554 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_in had 0 job(s) [purged] [2023-08-02 04:46:10] 2023-08-02 03:45:50,554 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_out had 0 job(s) [purged] [2023-08-02 04:46:10] 2023-08-02 03:45:50,554 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobs had 0 job(s) [purged] [2023-08-02 04:46:10] 2023-08-02 03:45:50,554 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobids has 1 job(s) [2023-08-02 04:46:10] 2023-08-02 03:45:50,554 | INFO | pilot.util.queuehandling | queue_report | queue realtimelog_payloads had 0 job(s) [purged] [2023-08-02 04:46:10] 2023-08-02 03:45:50,555 | INFO | pilot.util.queuehandling | queue_report | queue messages had 0 job(s) [purged] [2023-08-02 04:46:10] 2023-08-02 03:45:50,555 | INFO | pilot.control.job | has_job_completed | job 5920021018 has completed (purged errors) [2023-08-02 04:46:10] 2023-08-02 03:45:50,555 | DEBUG | pilot.util.realtimelogger | cleanup | attempting real-time logger cleanup [2023-08-02 04:46:10] 2023-08-02 03:45:50,555 | INFO | pilot.util.processes | cleanup | overall cleanup function is called [2023-08-02 04:46:10] 2023-08-02 03:45:50,557 | DEBUG | pilot.util.processes | cleanup | work directory was removed: /home/m/BOINC/slots/0/PanDA_Pilot-5920021018 [2023-08-02 04:46:10] 2023-08-02 03:45:51,562 | INFO | pilot.info.jobdata | collect_zombies | --- collectZombieJob: --- 10, [28919] [2023-08-02 04:46:10] 2023-08-02 03:45:51,562 | INFO | pilot.info.jobdata | collect_zombies | zombie collector trying to kill pid 28919 [2023-08-02 04:46:10] 2023-08-02 03:45:51,562 | INFO | pilot.info.jobdata | collect_zombies | harmless exception when collecting zombies: [Errno 10] No child processes [2023-08-02 04:46:10] 2023-08-02 03:45:52,567 | INFO | pilot.util.processes | cleanup | collected zombie processes [2023-08-02 04:46:10] 2023-08-02 03:45:52,568 | INFO | pilot.util.processes | cleanup | will now attempt to kill all subprocesses of pid=28919 [2023-08-02 04:46:10] 2023-08-02 03:45:52,612 | INFO | pilot.util.processes | kill_processes | process IDs to be killed: [28919] (in reverse order) [2023-08-02 04:46:10] 2023-08-02 03:45:52,651 | WARNING | pilot.util.processes | kill_processes | found no corresponding commands to process id(s) [2023-08-02 04:46:10] 2023-08-02 03:45:52,651 | INFO | pilot.util.processes | kill_orphans | Do not look for orphan processes in BOINC jobs [2023-08-02 04:46:10] 2023-08-02 03:45:52,651 | DEBUG | pilot.util.queuehandling | purge_queue | queue purged [2023-08-02 04:46:10] 2023-08-02 03:45:52,651 | INFO | pilot.control.job | retrieve | ready for new job [2023-08-02 04:46:10] 2023-08-02 03:45:52,651 | INFO | root | retrieve | pilot has finished with previous job - re-establishing logging [2023-08-02 04:46:10] 2023-08-02 03:45:52,652 | INFO | pilot.util.auxiliary | pilot_version_banner | ************************************** [2023-08-02 04:46:10] 2023-08-02 03:45:52,652 | INFO | pilot.util.auxiliary | pilot_version_banner | *** PanDA Pilot version 3.6.5.16 *** [2023-08-02 04:46:10] 2023-08-02 03:45:52,652 | INFO | pilot.util.auxiliary | pilot_version_banner | ************************************** [2023-08-02 04:46:10] 2023-08-02 03:45:52,652 | INFO | pilot.util.auxiliary | pilot_version_banner | [2023-08-02 04:46:10] 2023-08-02 03:45:52,669 | INFO | pilot.util.auxiliary | display_architecture_info | architecture information: [2023-08-02 04:46:10] 2023-08-02 03:45:52,670 | INFO | pilot.util.container | print_executable | executing command: cat /etc/os-release [2023-08-02 04:46:10] 2023-08-02 03:45:52,687 | INFO | pilot.util.filehandling | dump | cat /etc/os-release: [2023-08-02 04:46:10] NAME="CentOS Linux" [2023-08-02 04:46:10] VERSION="7 (Core)" [2023-08-02 04:46:10] ID="centos" [2023-08-02 04:46:10] ID_LIKE="rhel fedora" [2023-08-02 04:46:10] VERSION_ID="7" [2023-08-02 04:46:10] PRETTY_NAME="CentOS Linux 7 (Core)" [2023-08-02 04:46:10] ANSI_COLOR="0;31" [2023-08-02 04:46:10] CPE_NAME="cpe:/o:centos:centos:7" [2023-08-02 04:46:10] HOME_URL="https://www.centos.org/" [2023-08-02 04:46:10] BUG_REPORT_URL="https://bugs.centos.org/" [2023-08-02 04:46:10] [2023-08-02 04:46:10] CENTOS_MANTISBT_PROJECT="CentOS-7" [2023-08-02 04:46:10] CENTOS_MANTISBT_PROJECT_VERSION="7" [2023-08-02 04:46:10] REDHAT_SUPPORT_PRODUCT="centos" [2023-08-02 04:46:10] REDHAT_SUPPORT_PRODUCT_VERSION="7" [2023-08-02 04:46:10] [2023-08-02 04:46:10] 2023-08-02 03:45:52,688 | INFO | pilot.util.auxiliary | pilot_version_banner | ************************************** [2023-08-02 04:46:10] 2023-08-02 03:45:53,190 | DEBUG | pilot.util.monitoring | check_local_space | checking local space on /home/m/BOINC/slots/0 [2023-08-02 04:46:10] 2023-08-02 03:45:53,191 | INFO | pilot.util.container | print_executable | executing command: df -mP /home/m/BOINC/slots/0 [2023-08-02 04:46:10] 2023-08-02 03:45:53,208 | DEBUG | pilot.util.workernode | get_local_disk_space | stdout=Filesystem 1048576-blocks Used Available Capacity Mounted on [2023-08-02 04:46:10] /dev/sda1 455417 28985 403276 7% /home/m/BOINC/slots/0 [2023-08-02 04:46:10] 2023-08-02 03:45:53,208 | DEBUG | pilot.util.workernode | get_local_disk_space | stderr= [2023-08-02 04:46:10] 2023-08-02 03:45:53,208 | INFO | pilot.util.monitoring | check_local_space | sufficient remaining disk space (422865534976 B) [2023-08-02 04:46:10] 2023-08-02 03:45:53,209 | WARNING | pilot.control.job | proceed_with_getjob | since timefloor is set to 0, pilot was only allowed to run one job [2023-08-02 04:46:10] 2023-08-02 03:45:53,209 | WARNING | pilot.control.job | retrieve | setting graceful_stop since proceed_with_getjob() returned False (pilot will end) [2023-08-02 04:46:10] 2023-08-02 03:45:53,381 | WARNING | pilot.util.common | should_abort | job:job_monitor:received graceful stop - abort after this iteration [2023-08-02 04:46:10] 2023-08-02 03:45:53,381 | INFO | pilot.control.job | job_monitor | aborting loop [2023-08-02 04:46:10] 2023-08-02 03:45:53,495 | WARNING | pilot.util.common | should_abort | data:queue_monitoring:received graceful stop - abort after this iteration [2023-08-02 04:46:10] 2023-08-02 03:45:53,634 | DEBUG | pilot.control.data | control | data control ending since graceful_stop has been set [2023-08-02 04:46:10] 2023-08-02 03:45:53,747 | INFO | pilot.util.queuehandling | abort_jobs_in_queues | found 0 job(s) in 20 queues [2023-08-02 04:46:10] 2023-08-02 03:45:53,748 | WARNING | pilot.control.monitor | run_checks | pilot monitor received instruction that args.graceful_stop has been set [2023-08-02 04:46:10] 2023-08-02 03:45:53,748 | WARNING | pilot.control.monitor | run_checks | will wait for a maximum of 300 s for threads to finish [2023-08-02 04:46:10] 2023-08-02 03:45:54,214 | INFO | pilot.control.job | retrieve | [job] retrieve thread has finished [2023-08-02 04:46:10] 2023-08-02 03:45:54,237 | DEBUG | pilot.control.job | control | job control ending since graceful_stop has been set [2023-08-02 04:46:10] 2023-08-02 03:45:54,315 | INFO | pilot.control.payload | failed_post | [payload] failed_post thread has finished [2023-08-02 04:46:10] 2023-08-02 03:45:54,342 | INFO | pilot.control.job | validate | [job] validate thread has finished [2023-08-02 04:46:10] 2023-08-02 03:45:54,386 | INFO | pilot.control.job | job_monitor | [job] job monitor thread has finished [2023-08-02 04:46:10] 2023-08-02 03:45:54,542 | INFO | pilot.control.job | create_data_payload | [job] create_data_payload thread has finished [2023-08-02 04:46:10] 2023-08-02 03:45:54,622 | WARNING | pilot.util.common | should_abort | data:copytool_out:received graceful stop - abort after this iteration [2023-08-02 04:46:10] 2023-08-02 03:45:54,638 | DEBUG | pilot.control.payload | control | payload control ending since graceful_stop has been set [2023-08-02 04:46:10] 2023-08-02 03:45:54,640 | INFO | pilot.control.data | control | [data] control thread has finished [2023-08-02 04:46:10] 2023-08-02 03:45:54,666 | INFO | pilot.control.payload | validate_pre | [payload] validate_pre thread has finished [2023-08-02 04:46:10] 2023-08-02 03:45:54,873 | INFO | pilot.control.payload | validate_post | [payload] validate_post thread has finished [2023-08-02 04:46:10] 2023-08-02 03:45:55,242 | INFO | pilot.control.job | control | [job] control thread has finished [2023-08-02 04:46:10] 2023-08-02 03:45:55,542 | WARNING | pilot.util.common | should_abort | job:queue_monitor:received graceful stop - abort after this iteration [2023-08-02 04:46:10] 2023-08-02 03:45:55,610 | INFO | pilot.control.payload | execute_payloads | [payload] execute_payloads thread has finished [2023-08-02 04:46:10] 2023-08-02 03:45:55,625 | INFO | pilot.control.data | copytool_in | [data] copytool_in thread has finished [2023-08-02 04:46:10] 2023-08-02 03:45:55,641 | INFO | pilot.control.payload | control | [payload] control thread has finished [2023-08-02 04:46:10] 2023-08-02 03:45:56,547 | INFO | pilot.control.job | queue_monitor | [job] queue monitor thread has finished [2023-08-02 04:46:10] 2023-08-02 03:45:56,627 | INFO | pilot.control.data | copytool_out | [data] copytool_out thread has finished [2023-08-02 04:46:10] 2023-08-02 03:45:57,501 | INFO | pilot.control.data | queue_monitoring | [data] queue_monitor thread has finished [2023-08-02 04:46:10] 2023-08-02 03:46:03,928 | INFO | pilot.control.payload | get_logging_info | job.realtimelogging is not enabled [2023-08-02 04:46:10] 2023-08-02 03:46:03,928 | DEBUG | pilot.control.payload | run_realtimelog | real-time logging not needed at this point [2023-08-02 04:46:10] 2023-08-02 03:46:03,928 | DEBUG | pilot.control.payload | run_realtimelog | realtime logger was not found, waiting .. [2023-08-02 04:46:10] 2023-08-02 03:46:04,933 | INFO | pilot.control.payload | run_realtimelog | [payload] run_realtimelog thread has finished [2023-08-02 04:46:10] 2023-08-02 03:46:04,996 | INFO | pilot.util.processes | threads_aborted | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139975 [2023-08-02 04:46:10] 2023-08-02 03:46:04,996 | DEBUG | pilot.workflow.generic | run | will proceed to set job_aborted [2023-08-02 04:46:10] 2023-08-02 03:46:05,806 | WARNING | pilot.control.monitor | run_checks | job_aborted has been set - aborting pilot monitoring [2023-08-02 04:46:10] 2023-08-02 03:46:05,806 | INFO | pilot.control.monitor | control | [monitor] control thread has ended [2023-08-02 04:46:10] 2023-08-02 03:46:10,021 | DEBUG | pilot.workflow.generic | run | all relevant threads have aborted (thread count=1) [2023-08-02 04:46:10] 2023-08-02 03:46:10,021 | INFO | pilot.workflow.generic | run | end of generic workflow (traces error code: 0) [2023-08-02 04:46:10] 2023-08-02 03:46:10,021 | DEBUG | root | <module> | trace=<class 'pilot.workflow.generic.traces'> [2023-08-02 04:46:10] 2023-08-02 03:46:10,021 | INFO | root | wrap_up | traces error code: 0 [2023-08-02 04:46:10] 2023-08-02 03:46:10,022 | INFO | root | wrap_up | pilot has finished (exit code=0, shell exit code=0) [2023-08-02 04:46:10] 2023-08-02 03:46:10,074 [wrapper] ==== pilot stdout END ==== [2023-08-02 04:46:10] 2023-08-02 03:46:10,077 [wrapper] ==== wrapper stdout RESUME ==== [2023-08-02 04:46:10] 2023-08-02 03:46:10,081 [wrapper] pilotpid: 21710 [2023-08-02 04:46:10] 2023-08-02 03:46:10,085 [wrapper] Pilot exit status: 0 [2023-08-02 04:46:10] 2023-08-02 03:46:10,095 [wrapper] pandaids: 5920021018 [2023-08-02 04:46:10] 2023-08-02 03:46:10,101 [wrapper] apfmon messages muted [2023-08-02 04:46:10] 2023-08-02 03:46:10,105 [wrapper] Test setup, not cleaning [2023-08-02 04:46:10] 2023-08-02 03:46:10,108 [wrapper] ==== wrapper stdout END ==== [2023-08-02 04:46:10] 2023-08-02 03:46:10,113 [wrapper] ==== wrapper stderr END ==== [2023-08-02 04:46:10] 2023-08-02 03:46:10,121 [wrapper] wrapperexiting ec=0, duration=1707 [2023-08-02 04:46:10] 2023-08-02 03:46:10,126 [wrapper] apfmon messages muted [2023-08-02 04:46:10] *** Error codes and diagnostics *** [2023-08-02 04:46:10] "exeErrorCode": 0, [2023-08-02 04:46:10] "exeErrorDiag": "", [2023-08-02 04:46:10] "pilotErrorCode": 0, [2023-08-02 04:46:10] "pilotErrorDiag": "", [2023-08-02 04:46:10] *** Listing of results directory *** [2023-08-02 04:46:10] total 47684 [2023-08-02 04:46:10] -rw-r--r-- 1 m m 4388 Aug 2 04:11 queuedata.json [2023-08-02 04:46:10] -rwx------ 1 m m 27275 Aug 2 04:12 runpilot2-wrapper.sh [2023-08-02 04:46:10] -rw------- 1 m m 917375 Aug 2 04:12 pilot3.tar.gz [2023-08-02 04:46:10] -rw-rw-r-- 1 m m 107 Aug 2 04:17 wrapper_26015_x86_64-pc-linux-gnu [2023-08-02 04:46:10] -rwxr-xr-x 1 m m 7986 Aug 2 04:17 run_atlas [2023-08-02 04:46:10] -rw-rw-r-- 1 m m 112 Aug 2 04:17 job.xml [2023-08-02 04:46:10] -rw-r--r-- 2 m m 17632 Aug 2 04:17 start_atlas.sh [2023-08-02 04:46:10] drwxrwx--x 2 m m 4096 Aug 2 04:17 shared [2023-08-02 04:46:10] -rw-r--r-- 2 m m 926786 Aug 2 04:17 input.tar.gz [2023-08-02 04:46:10] -rw-rw-r-- 1 m m 5728 Aug 2 04:17 init_data.xml [2023-08-02 04:46:10] -rw-r--r-- 2 m m 39611081 Aug 2 04:17 EVNT.04972714._000022.pool.root.1 [2023-08-02 04:46:10] -rw-rw-r-- 1 m m 0 Aug 2 04:17 boinc_lockfile [2023-08-02 04:46:10] -rw-rw-r-- 1 m m 2664 Aug 2 04:17 pandaJob.out [2023-08-02 04:46:10] -rw------- 1 m m 424 Aug 2 04:17 setup.sh.local [2023-08-02 04:46:10] -rw------- 1 m m 1379189 Aug 2 04:19 cric_ddmendpoints.json [2023-08-02 04:46:10] -rw------- 1 m m 1013361 Aug 2 04:19 agis_schedconf.cvmfs.json [2023-08-02 04:46:10] drwx------ 5 m m 4096 Aug 2 04:20 pilot3 [2023-08-02 04:46:10] -rw------- 1 m m 1549092 Aug 2 04:38 output.1.31bbc036-daa6-4ba1-8de2-392166ce8664_22250.pool.root [2023-08-02 04:46:10] -rw------- 1 m m 1018 Aug 2 04:38 memory_monitor_summary.json [2023-08-02 04:46:10] -rw-rw-r-- 1 m m 533 Aug 2 04:38 boinc_task_state.xml [2023-08-02 04:46:10] -rw------- 1 m m 181784 Aug 2 04:41 31bbc036-daa6-4ba1-8de2-392166ce8664_22250.1.job.log.tgz [2023-08-02 04:46:10] -rw------- 1 m m 7390 Aug 2 04:45 heartbeat.json [2023-08-02 04:46:10] -rw-rw-r-- 1 m m 25 Aug 2 04:46 wrapper_checkpoint.txt [2023-08-02 04:46:10] -rw-rw-r-- 1 m m 8192 Aug 2 04:46 boinc_mmap_file [2023-08-02 04:46:10] -rw------- 1 m m 8361 Aug 2 04:46 pilotlog.txt [2023-08-02 04:46:10] -rw------- 1 m m 641654 Aug 2 04:46 31bbc036-daa6-4ba1-8de2-392166ce8664_22250.1.job.log [2023-08-02 04:46:10] -rw------- 1 m m 464 Aug 2 04:46 output.list [2023-08-02 04:46:10] -rw-rw-r-- 1 m m 748 Aug 2 04:46 runtime_log [2023-08-02 04:46:10] -rw------- 1 m m 2396160 Aug 2 04:46 result.tar.gz [2023-08-02 04:46:10] -rw-rw-r-- 1 m m 11913 Aug 2 04:46 runtime_log.err [2023-08-02 04:46:10] -rw------- 1 m m 626 Aug 2 04:46 Ob1LDmkSHl3n7Olcko1bjSoqABFKDmABFKDm7AsVDmeROKDmy0MF0n.diag [2023-08-02 04:46:10] -rw-rw-r-- 1 m m 28575 Aug 2 04:46 stderr.txt [2023-08-02 04:46:10] HITS file was successfully produced: [2023-08-02 04:46:10] -rw------- 1 m m 1549092 Aug 2 04:38 shared/HITS.pool.root.1 [2023-08-02 04:46:10] *** Contents of shared directory: *** [2023-08-02 04:46:10] total 43468 [2023-08-02 04:46:10] -rw-r--r-- 2 m m 17632 Aug 2 04:17 start_atlas.sh [2023-08-02 04:46:10] -rw-r--r-- 2 m m 926786 Aug 2 04:17 input.tar.gz [2023-08-02 04:46:10] -rw-r--r-- 2 m m 39611081 Aug 2 04:17 ATLAS.root_0 [2023-08-02 04:46:10] -rw------- 1 m m 1549092 Aug 2 04:38 HITS.pool.root.1 [2023-08-02 04:46:10] -rw------- 1 m m 2396160 Aug 2 04:46 result.tar.gz 04:46:11 (18114): run_atlas exited; CPU time 704.605990 04:46:11 (18114): called boinc_finish(0) </stderr_txt> ]]>
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