Name lo4KDmkGtn3n7Olcko1bjSoqABFKDmABFKDm7AsVDmlxOKDmikFAEn_1
Workunit 2324197
Created 9 Aug 2023, 9:26:43 UTC
Sent 9 Aug 2023, 9:27:36 UTC
Report deadline 16 Aug 2023, 9:27:36 UTC
Received 9 Aug 2023, 9:51:09 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 1599
Run time 23 min 7 sec
CPU time 2 min 51 sec
Validate state Valid
Credit 14.25
Device peak FLOPS 9.18 GFLOPS
Application version ATLAS Simulation v3.01 (vbox64_mt_mcore_atlas)
windows_x86_64
Peak working set size 87.05 MB
Peak swap size 111.43 MB
Peak disk usage 592.73 MB

Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
2023-08-09 03:27:45 (5060): Detected: vboxwrapper 26206
2023-08-09 03:27:45 (5060): Detected: BOINC client v7.20.2
2023-08-09 03:27:45 (5060): Detected: VirtualBox VboxManage Interface (Version: 6.1.40)
2023-08-09 03:27:46 (5060): Successfully copied 'init_data.xml' to the shared directory.
2023-08-09 03:27:46 (5060): Create VM. (boinc_c5dce6e5628f6d75, slot#1)
2023-08-09 03:27:47 (5060): Setting Memory Size for VM. (4200MB)
2023-08-09 03:27:47 (5060): Setting CPU Count for VM. (2)
2023-08-09 03:27:47 (5060): Setting Chipset Options for VM.
2023-08-09 03:27:47 (5060): Setting Graphics Controller Options for VM.
2023-08-09 03:27:48 (5060): Setting Boot Options for VM.
2023-08-09 03:27:48 (5060): Setting Network Configuration for NAT.
2023-08-09 03:27:48 (5060): Enabling VM Network Access.
2023-08-09 03:27:48 (5060): Disabling USB Support for VM.
2023-08-09 03:27:49 (5060): Disabling COM Port Support for VM.
2023-08-09 03:27:49 (5060): Disabling LPT Port Support for VM.
2023-08-09 03:27:49 (5060): Disabling Audio Support for VM.
2023-08-09 03:27:49 (5060): Disabling Clipboard Support for VM.
2023-08-09 03:27:50 (5060): Disabling Drag and Drop Support for VM.
2023-08-09 03:27:50 (5060): Adding storage controller(s) to VM.
2023-08-09 03:27:50 (5060): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2023-08-09 03:27:51 (5060): Adding VirtualBox Guest Additions to VM.
2023-08-09 03:27:51 (5060): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2023-08-09 03:27:51 (5060): forwarding host port 55576 to guest port 80
2023-08-09 03:27:52 (5060): Enabling remote desktop for VM.
2023-08-09 03:27:52 (5060): Enabling shared directory for VM.
2023-08-09 03:27:53 (5060): Starting VM using VBoxManage interface. (boinc_c5dce6e5628f6d75, slot#1)
2023-08-09 03:27:58 (5060): Successfully started VM. (PID = '12040')
2023-08-09 03:27:58 (5060): Reporting VM Process ID to BOINC.
2023-08-09 03:27:58 (5060): Guest Log: BIOS: VirtualBox 6.1.40
2023-08-09 03:27:58 (5060): Guest Log: CPUID EDX: 0x178bfbff
2023-08-09 03:27:58 (5060): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2023-08-09 03:27:58 (5060): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2023-08-09 03:27:58 (5060): VM state change detected. (old = 'poweredoff', new = 'running')
2023-08-09 03:27:58 (5060): Detected: Web Application Enabled (http://localhost:55576)
2023-08-09 03:27:58 (5060): Detected: Remote Desktop Enabled (localhost:55577)
2023-08-09 03:27:58 (5060): Preference change detected
2023-08-09 03:27:58 (5060): Setting CPU throttle for VM. (70%)
2023-08-09 03:27:58 (5060): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2023-08-09 03:28:00 (5060): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2023-08-09 03:28:00 (5060): Guest Log: BIOS: Booting from Hard Disk...
2023-08-09 03:28:03 (5060): Guest Log: BIOS: KBD: unsupported int 16h function 03
2023-08-09 03:28:03 (5060): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2023-08-09 03:28:03 (5060): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2023-08-09 03:28:03 (5060): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2023-08-09 03:28:03 (5060): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2023-08-09 03:28:03 (5060): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2023-08-09 03:28:03 (5060): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2023-08-09 03:28:03 (5060): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2023-08-09 03:28:03 (5060): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2023-08-09 03:28:03 (5060): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2023-08-09 03:28:03 (5060): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2023-08-09 03:28:03 (5060): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2023-08-09 03:28:03 (5060): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2023-08-09 03:28:03 (5060): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2023-08-09 03:28:03 (5060): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2023-08-09 03:28:03 (5060): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2023-08-09 03:28:03 (5060): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2023-08-09 03:28:03 (5060): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2023-08-09 03:28:03 (5060): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2023-08-09 03:28:03 (5060): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2023-08-09 03:28:03 (5060): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2023-08-09 03:28:03 (5060): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2023-08-09 03:28:03 (5060): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2023-08-09 03:28:03 (5060): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2023-08-09 03:28:03 (5060): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2023-08-09 03:28:03 (5060): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2023-08-09 03:28:03 (5060): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2023-08-09 03:28:03 (5060): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2023-08-09 03:28:03 (5060): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2023-08-09 03:28:03 (5060): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2023-08-09 03:28:03 (5060): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2023-08-09 03:28:03 (5060): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2023-08-09 03:28:10 (5060): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2023-08-09 03:28:10 (5060): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2023-08-09 03:28:21 (5060): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2023-08-09 03:28:21 (5060): Guest Log: 00:00:00.000130 main     Log opened 2023-08-09T03:28:19.424129000Z
2023-08-09 03:28:21 (5060): Guest Log: 00:00:00.000253 main     OS Product: Linux
2023-08-09 03:28:21 (5060): Guest Log: 00:00:00.000280 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2023-08-09 03:28:21 (5060): Guest Log: 00:00:00.000302 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2023-08-09 03:28:21 (5060): Guest Log: 00:00:00.000323 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2023-08-09 03:28:21 (5060): Guest Log: 00:00:00.000323 main     Process ID: 1266
2023-08-09 03:28:21 (5060): Guest Log: 00:00:00.000324 main     Package type: LINUX_64BITS_GENERIC
2023-08-09 03:28:21 (5060): Guest Log: 00:00:00.001856 main     5.2.32 r132073 started. Verbose level = 0
2023-08-09 03:28:21 (5060): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2023-08-09 03:28:21 (5060): Guest Log: [INFO] Mounting shared directory
2023-08-09 03:28:21 (5060): Guest Log: [INFO] Checking for init_data.xml
2023-08-09 03:28:27 (5060): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2023-08-09 03:28:27 (5060): Guest Log: [INFO] Detected branch: dev
2023-08-09 03:28:27 (5060): Guest Log: This is the dev version of the ATLAS job wrapper
2023-08-09 03:28:27 (5060): Guest Log: Copying input files
2023-08-09 03:28:27 (5060): Guest Log: Copied input files into RunAtlas.
2023-08-09 03:28:28 (5060): Guest Log: This VM did not configure a local http proxy via BOINC.
2023-08-09 03:28:28 (5060): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2023-08-09 03:28:28 (5060): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2023-08-09 03:28:28 (5060): Guest Log: Further information can be found at the LHC@home message board.
2023-08-09 03:28:31 (5060): Guest Log: 00:00:10.004686 timesync vgsvcTimeSyncWorker: Radical guest time change: 21 611 371 462 000ns (GuestNow=1 691 573 310 799 555 000 ns GuestLast=1 691 551 699 428 093 000 ns fSetTimeLastLoop=true )
2023-08-09 03:28:37 (5060): Guest Log: Running cvmfs_config stat atlas.cern.ch
2023-08-09 03:28:38 (5060): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2023-08-09 03:28:38 (5060): Guest Log: 2.6.3.0 1544 0 30148 122256 4 1 3116488 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2023-08-09 03:28:42 (5060): Guest Log: copied the webapp to /var/www
2023-08-09 03:28:42 (5060): Guest Log: ATHENA_PROC_NUMBER=2
2023-08-09 03:28:42 (5060): Guest Log: ATHENA_CORE_NUMBER=2
2023-08-09 03:28:43 (5060): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2023-08-09 03:28:43 (5060): Guest Log:  *** Starting ATLAS job. (PandaID=5926876396 taskID=NULL&cor) ***
2023-08-09 03:50:44 (5060): Guest Log:  *** Job finished ***
2023-08-09 03:50:44 (5060): Guest Log:  *** The last 20 lines of the pilot log: ***
2023-08-09 03:50:44 (5060): Guest Log:  *** Error codes and diagnostics ***
2023-08-09 03:50:44 (5060): Guest Log:     "exeErrorCode": 0,
2023-08-09 03:50:44 (5060): Guest Log:     "exeErrorDiag": "",
2023-08-09 03:50:44 (5060): Guest Log:     "pilotErrorCode": 1305,
2023-08-09 03:50:44 (5060): Guest Log:     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute 2023-08-09 09:41:52,248 CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a SIGSEGV signal (exit code 139)",
2023-08-09 03:50:44 (5060): Guest Log:  *** Listing of results directory ***
2023-08-09 03:50:44 (5060): Guest Log: total 3760
2023-08-09 03:50:44 (5060): Guest Log: -rw-r--r--. 1 atlas atlas  418016 Aug  9 07:29 pilot3.tar.gz
2023-08-09 03:50:44 (5060): Guest Log: -rwx------. 1 atlas atlas   27277 Aug  9 07:58 runpilot2-wrapper.sh
2023-08-09 03:50:44 (5060): Guest Log: -rw-r--r--. 1 atlas atlas    4388 Aug  9 07:58 queuedata.json
2023-08-09 03:50:44 (5060): Guest Log: -rwxr-xr-x. 1 atlas atlas    8272 Aug  9 09:28 init_data.xml
2023-08-09 03:50:44 (5060): Guest Log: -rwxr-xr-x. 1 atlas atlas  428862 Aug  9 09:28 input.tar.gz
2023-08-09 03:50:44 (5060): Guest Log: -rwxr-xr-x. 1 atlas atlas   17604 Aug  9 09:28 start_atlas.sh
2023-08-09 03:50:44 (5060): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Aug  9 09:28 EVNT.04972714._000036.pool.root.1 -> /data/./ATLAS.root_0
2023-08-09 03:50:44 (5060): Guest Log: -rw-r--r--. 1 atlas atlas    2754 Aug  9 09:28 pandaJob.out
2023-08-09 03:50:44 (5060): Guest Log: -rw-------. 1 atlas atlas     424 Aug  9 09:28 setup.sh.local
2023-08-09 03:50:44 (5060): Guest Log: -rw-------. 1 atlas atlas 1018627 Aug  9 09:29 agis_schedconf.cvmfs.json
2023-08-09 03:50:44 (5060): Guest Log: -rw-------. 1 atlas atlas 1379193 Aug  9 09:29 cric_ddmendpoints.json
2023-08-09 03:50:44 (5060): Guest Log: drwx------. 4 atlas atlas     279 Aug  9 09:31 pilot3
2023-08-09 03:50:44 (5060): Guest Log: -rw-------. 1 atlas atlas    1011 Aug  9 09:41 memory_monitor_summary.json
2023-08-09 03:50:44 (5060): Guest Log: -rw-------. 1 atlas atlas   67626 Aug  9 09:41 9d870ac1-5cc7-4173-95e3-6aa2c2c024d7_92293.1.job.log.tgz
2023-08-09 03:50:44 (5060): Guest Log: -rw-------. 1 atlas atlas    7504 Aug  9 09:50 heartbeat.json
2023-08-09 03:50:44 (5060): Guest Log: -rw-------. 1 atlas atlas    4029 Aug  9 09:50 pilotlog.txt
2023-08-09 03:50:44 (5060): Guest Log: -rw-------. 1 atlas atlas  163792 Aug  9 09:50 9d870ac1-5cc7-4173-95e3-6aa2c2c024d7_92293.1.job.log
2023-08-09 03:50:44 (5060): Guest Log: -rw-------. 1 atlas atlas     227 Aug  9 09:50 output.list
2023-08-09 03:50:44 (5060): Guest Log: -rw-r--r--. 1 atlas atlas     686 Aug  9 09:50 runtime_log
2023-08-09 03:50:44 (5060): Guest Log: -rw-------. 1 atlas atlas  245760 Aug  9 09:50 result.tar.gz
2023-08-09 03:50:44 (5060): Guest Log: -rw-r--r--. 1 atlas atlas   11348 Aug  9 09:50 runtime_log.err
2023-08-09 03:50:44 (5060): Guest Log: -rw-------. 1 atlas atlas     634 Aug  9 09:50 lo4KDmkGtn3n7Olcko1bjSoqABFKDmABFKDm7AsVDmlxOKDmikFAEn.diag
2023-08-09 03:50:44 (5060): Guest Log: Looking for outputfile output.1.9d870ac1-5cc7-4173-95e3-6aa2c2c024d7_92293.pool.root
2023-08-09 03:50:44 (5060): Guest Log: No HITS file was produced
2023-08-09 03:50:44 (5060): Guest Log: Successfully finished the ATLAS job!
2023-08-09 03:50:44 (5060): Guest Log: Copying the results back to the shared directory!
2023-08-09 03:50:44 (5060): Guest Log:  *** Contents of shared directory: ***
2023-08-09 03:50:44 (5060): Guest Log: total 38492
2023-08-09 03:50:44 (5060): Guest Log: -rwxrwxrwx. 1 root root 38705932 Aug  9 09:27 ATLAS.root_0
2023-08-09 03:50:44 (5060): Guest Log: -rwxrwxrwx. 1 root root     8272 Aug  9 09:27 init_data.xml
2023-08-09 03:50:44 (5060): Guest Log: -rwxrwxrwx. 1 root root   428862 Aug  9 09:27 input.tar.gz
2023-08-09 03:50:44 (5060): Guest Log: -rwxrwxrwx. 1 root root   245760 Aug  9 09:50 result.tar.gz
2023-08-09 03:50:44 (5060): Guest Log: -rwxrwxrwx. 1 root root    17604 Aug  9 09:27 start_atlas.sh
2023-08-09 03:50:44 (5060): Guest Log:  *** Success! Shutting down the machine. ***
2023-08-09 03:50:44 (5060): VM Completion File Detected.
2023-08-09 03:50:44 (5060): Powering off VM.
2023-08-09 03:50:45 (5060): Successfully stopped VM.
2023-08-09 03:50:45 (5060): Deregistering VM. (boinc_c5dce6e5628f6d75, slot#1)
2023-08-09 03:50:45 (5060): Removing network bandwidth throttle group from VM.
2023-08-09 03:50:45 (5060): Removing VM from VirtualBox.
03:50:51 (5060): called boinc_finish(0)

</stderr_txt>
]]>


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