Name | 0OENDmFLAo3n7Olcko1bjSoqABFKDmABFKDm7AsVDmu0OKDm5WUU1m_0 |
Workunit | 2324434 |
Created | 10 Aug 2023, 2:12:35 UTC |
Sent | 10 Aug 2023, 2:29:50 UTC |
Report deadline | 17 Aug 2023, 2:29:50 UTC |
Received | 10 Aug 2023, 2:58:02 UTC |
Server state | Over |
Outcome | Success |
Client state | Done |
Exit status | 0 (0x00000000) |
Computer ID | 1498 |
Run time | 25 min 47 sec |
CPU time | 11 min 13 sec |
Validate state | Valid |
Credit | 18.47 |
Device peak FLOPS | 13.05 GFLOPS |
Application version | ATLAS Simulation v3.01 (native_mt) x86_64-pc-linux-gnu |
Peak working set size | 1.49 GB |
Peak swap size | 2.12 GB |
Peak disk usage | 83.65 MB |
<core_client_version>7.4.25</core_client_version> <![CDATA[ <stderr_txt> 03:30:58 (19661): wrapper (7.7.26015): starting 03:30:58 (19661): wrapper: running run_atlas (--nthreads 4) [2023-08-10 03:30:58] Arguments: --nthreads 4 [2023-08-10 03:30:58] Threads: 4 [2023-08-10 03:30:58] Checking for CVMFS [2023-08-10 03:31:01] Probing /cvmfs/atlas.cern.ch... OK [2023-08-10 03:31:03] Probing /cvmfs/atlas-condb.cern.ch... OK [2023-08-10 03:31:03] Running cvmfs_config stat atlas.cern.ch [2023-08-10 03:31:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE [2023-08-10 03:31:03] 2.9.0.0 19805 0 24516 122282 3 1 3436662 4194304 0 130560 0 0 0.000 829 368 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.100.152:3128 1 [2023-08-10 03:31:03] CVMFS is ok [2023-08-10 03:31:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 [2023-08-10 03:31:03] Checking for apptainer binary... [2023-08-10 03:31:03] Using apptainer found in PATH at /usr/bin/apptainer [2023-08-10 03:31:03] Running /usr/bin/apptainer --version [2023-08-10 03:31:03] apptainer version 1.0.3 [2023-08-10 03:31:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname [2023-08-10 03:31:03] TeeC16 [2023-08-10 03:31:03] apptainer works [2023-08-10 03:31:03] Set ATHENA_PROC_NUMBER=4 [2023-08-10 03:31:03] Set ATHENA_CORE_NUMBER=4 [2023-08-10 03:31:03] Starting ATLAS job with PandaID=5927749917 [2023-08-10 03:31:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/m/BOINC/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh [2023-08-10 03:56:44] *** The last 200 lines of the pilot log: *** [2023-08-10 03:56:44] 2023-08-10 02:55:49,540 | WARNING | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: [2023-08-10 03:56:44] 2023-08-10 02:55:49,540 | INFO | will try again after 21s.. [2023-08-10 03:56:44] 2023-08-10 02:55:49,589 | INFO | monitor loop #210: job 0:5927749917 is in state 'stageout' [2023-08-10 03:56:44] 2023-08-10 02:55:49,623 | INFO | number of running child processes to parent process 30708: 1 [2023-08-10 03:56:44] 2023-08-10 02:55:49,623 | INFO | maximum number of monitored processes: 5 [2023-08-10 03:56:44] 2023-08-10 02:55:52,126 | INFO | monitor loop #211: job 0:5927749917 is in state 'stageout' [2023-08-10 03:56:44] 2023-08-10 02:55:52,171 | INFO | number of running child processes to parent process 30708: 1 [2023-08-10 03:56:44] 2023-08-10 02:55:52,172 | INFO | maximum number of monitored processes: 5 [2023-08-10 03:56:44] 2023-08-10 02:55:54,675 | INFO | monitor loop #212: job 0:5927749917 is in state 'stageout' [2023-08-10 03:56:44] 2023-08-10 02:55:54,709 | INFO | number of running child processes to parent process 30708: 1 [2023-08-10 03:56:44] 2023-08-10 02:55:54,709 | INFO | maximum number of monitored processes: 5 [2023-08-10 03:56:44] 2023-08-10 02:55:57,212 | INFO | monitor loop #213: job 0:5927749917 is in state 'stageout' [2023-08-10 03:56:44] 2023-08-10 02:55:57,257 | INFO | number of running child processes to parent process 30708: 1 [2023-08-10 03:56:44] 2023-08-10 02:55:57,258 | INFO | maximum number of monitored processes: 5 [2023-08-10 03:56:44] 2023-08-10 02:55:59,758 | INFO | monitor loop #214: job 0:5927749917 is in state 'stageout' [2023-08-10 03:56:44] 2023-08-10 02:55:59,793 | INFO | number of running child processes to parent process 30708: 1 [2023-08-10 03:56:44] 2023-08-10 02:55:59,793 | INFO | maximum number of monitored processes: 5 [2023-08-10 03:56:44] 2023-08-10 02:56:02,296 | INFO | monitor loop #215: job 0:5927749917 is in state 'stageout' [2023-08-10 03:56:44] 2023-08-10 02:56:02,340 | INFO | number of running child processes to parent process 30708: 1 [2023-08-10 03:56:44] 2023-08-10 02:56:02,341 | INFO | maximum number of monitored processes: 5 [2023-08-10 03:56:44] 2023-08-10 02:56:04,844 | INFO | monitor loop #216: job 0:5927749917 is in state 'stageout' [2023-08-10 03:56:44] 2023-08-10 02:56:04,878 | INFO | number of running child processes to parent process 30708: 1 [2023-08-10 03:56:44] 2023-08-10 02:56:04,879 | INFO | maximum number of monitored processes: 5 [2023-08-10 03:56:44] 2023-08-10 02:56:07,382 | INFO | monitor loop #217: job 0:5927749917 is in state 'stageout' [2023-08-10 03:56:44] 2023-08-10 02:56:07,426 | INFO | number of running child processes to parent process 30708: 1 [2023-08-10 03:56:44] 2023-08-10 02:56:07,427 | INFO | maximum number of monitored processes: 5 [2023-08-10 03:56:44] 2023-08-10 02:56:09,929 | INFO | monitor loop #218: job 0:5927749917 is in state 'stageout' [2023-08-10 03:56:44] 2023-08-10 02:56:09,962 | INFO | number of running child processes to parent process 30708: 1 [2023-08-10 03:56:44] 2023-08-10 02:56:09,962 | INFO | maximum number of monitored processes: 5 [2023-08-10 03:56:44] 2023-08-10 02:56:10,638 | INFO | [attempt=3/3] loading data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json [2023-08-10 03:56:44] 2023-08-10 02:56:10,773 | WARNING | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: [2023-08-10 03:56:44] 2023-08-10 02:56:10,773 | WARNING | cache file=/home/m/BOINC/slots/1/agis_ddmendpoints.agis.ALL.json is not available: [Errno 2] No such file or directory: '/home/m/BOINC/slots/1/agis_ddmendpoints.ag [2023-08-10 03:56:44] 2023-08-10 02:56:10,837 | INFO | transferring file 81aa4c16-333a-4bf6-bc8e-8b09a75c948a_197.1.job.log.tgz from /home/m/BOINC/slots/1/PanDA_Pilot-5927749917/81aa4c16-333a-4bf6-bc8e-8b09a75c948a_197 [2023-08-10 03:56:44] 2023-08-10 02:56:10,838 | INFO | executing command: /usr/bin/env mv /home/m/BOINC/slots/1/PanDA_Pilot-5927749917/81aa4c16-333a-4bf6-bc8e-8b09a75c948a_197.1.job.log.tgz /home/m/BOINC/slots/1/81aa4c [2023-08-10 03:56:44] 2023-08-10 02:56:10,854 | INFO | Adding to output.list: 81aa4c16-333a-4bf6-bc8e-8b09a75c948a_197.1.job.log.tgz davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/cb/bd/81aa4c16-333a-4b [2023-08-10 03:56:44] 2023-08-10 02:56:10,855 | INFO | summary of transferred files: [2023-08-10 03:56:44] 2023-08-10 02:56:10,855 | INFO | -- lfn=81aa4c16-333a-4bf6-bc8e-8b09a75c948a_197.1.job.log.tgz, status_code=0, status=transferred [2023-08-10 03:56:44] 2023-08-10 02:56:10,855 | INFO | stage-out finished correctly [2023-08-10 03:56:44] 2023-08-10 02:56:10,962 | INFO | finished stage-out for finished payload, adding job to finished_jobs queue [2023-08-10 03:56:44] 2023-08-10 02:56:12,470 | INFO | monitor loop #219: job 0:5927749917 is in state 'finished' [2023-08-10 03:56:44] 2023-08-10 02:56:12,470 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-08-10 03:56:44] 2023-08-10 02:56:13,701 | INFO | job 5927749917 has state=finished [2023-08-10 03:56:44] 2023-08-10 02:56:13,701 | INFO | preparing for final server update for job 5927749917 in state='finished' [2023-08-10 03:56:44] 2023-08-10 02:56:13,702 | INFO | executing command: curl --connect-timeout 20 --max-time 120 -H "Content-Type: application/json" -X POST --upload-file /home/m/BOINC/slots/1/PanDA_Pilot-5927749917/ [2023-08-10 03:56:44] 2023-08-10 02:56:14,830 | INFO | this job has now completed (state=finished) [2023-08-10 03:56:44] 2023-08-10 02:56:14,831 | INFO | pilot will not update the server (heartbeat message will be written to file) [2023-08-10 03:56:44] 2023-08-10 02:56:14,831 | INFO | job 5927749917 has finished - writing final server update [2023-08-10 03:56:44] 2023-08-10 02:56:14,831 | INFO | fitting pss+swap vs Time [2023-08-10 03:56:44] 2023-08-10 02:56:14,832 | INFO | current memory leak: 759.33 B/s (using 9 data points, chi2=0.11) [2023-08-10 03:56:44] 2023-08-10 02:56:14,832 | INFO | total number of processed events: 2 (read) [2023-08-10 03:56:44] 2023-08-10 02:56:14,851 | INFO | executing command: lscpu [2023-08-10 03:56:44] 2023-08-10 02:56:14,868 | INFO | found 2 cores (2 cores per socket, 1 sockets) [2023-08-10 03:56:44] 2023-08-10 02:56:14,868 | INFO | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo [2023-08-10 03:56:44] 2023-08-10 02:56:14,891 | INFO | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup [2023-08-10 03:56:44] 2023-08-10 02:56:14,973 | INFO | monitor loop #220: job 0:5927749917 is in state 'finished' [2023-08-10 03:56:44] 2023-08-10 02:56:14,974 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-08-10 03:56:44] 2023-08-10 02:56:17,477 | INFO | monitor loop #221: job 0:5927749917 is in state 'finished' [2023-08-10 03:56:44] 2023-08-10 02:56:17,478 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-08-10 03:56:44] 2023-08-10 02:56:19,981 | INFO | monitor loop #222: job 0:5927749917 is in state 'finished' [2023-08-10 03:56:44] 2023-08-10 02:56:19,982 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-08-10 03:56:44] 2023-08-10 02:56:22,194 | INFO | CPU arch script returned: x86-64-v2 [2023-08-10 03:56:44] 2023-08-10 02:56:22,194 | INFO | using path: /home/m/BOINC/slots/1/PanDA_Pilot-5927749917/memory_monitor_summary.json (trf name=prmon) [2023-08-10 03:56:44] 2023-08-10 02:56:22,196 | INFO | extracted standard info from prmon json [2023-08-10 03:56:44] 2023-08-10 02:56:22,196 | INFO | extracted standard memory fields from prmon json [2023-08-10 03:56:44] 2023-08-10 02:56:22,196 | INFO | .............................. [2023-08-10 03:56:44] 2023-08-10 02:56:22,196 | INFO | . Timing measurements: [2023-08-10 03:56:44] 2023-08-10 02:56:22,196 | INFO | . get job = 80 s [2023-08-10 03:56:44] 2023-08-10 02:56:22,196 | INFO | . initial setup = 59 s [2023-08-10 03:56:44] 2023-08-10 02:56:22,196 | INFO | . payload setup = 7 s [2023-08-10 03:56:44] 2023-08-10 02:56:22,196 | INFO | . stage-in = 43 s [2023-08-10 03:56:44] 2023-08-10 02:56:22,196 | INFO | . payload execution = 934 s [2023-08-10 03:56:44] 2023-08-10 02:56:22,197 | INFO | . stage-out = 353 s [2023-08-10 03:56:44] 2023-08-10 02:56:22,197 | INFO | .............................. [2023-08-10 03:56:44] 2023-08-10 02:56:22,290 | INFO | [2023-08-10 03:56:44] 2023-08-10 02:56:22,290 | INFO | job summary report [2023-08-10 03:56:44] 2023-08-10 02:56:22,291 | INFO | -------------------------------------------------- [2023-08-10 03:56:44] 2023-08-10 02:56:22,291 | INFO | PanDA job id: 5927749917 [2023-08-10 03:56:44] 2023-08-10 02:56:22,291 | INFO | task id: NULL [2023-08-10 03:56:44] 2023-08-10 02:56:22,291 | INFO | errors: (none) [2023-08-10 03:56:44] 2023-08-10 02:56:22,291 | INFO | status: LOG_TRANSFER = DONE [2023-08-10 03:56:44] 2023-08-10 02:56:22,291 | INFO | pilot state: finished [2023-08-10 03:56:44] 2023-08-10 02:56:22,291 | INFO | transexitcode: 0 [2023-08-10 03:56:44] 2023-08-10 02:56:22,291 | INFO | exeerrorcode: 0 [2023-08-10 03:56:44] 2023-08-10 02:56:22,291 | INFO | exeerrordiag: [2023-08-10 03:56:44] 2023-08-10 02:56:22,291 | INFO | exitcode: 0 [2023-08-10 03:56:44] 2023-08-10 02:56:22,292 | INFO | exitmsg: OK [2023-08-10 03:56:44] 2023-08-10 02:56:22,292 | INFO | cpuconsumptiontime: 688 s [2023-08-10 03:56:44] 2023-08-10 02:56:22,292 | INFO | nevents: 2 [2023-08-10 03:56:44] 2023-08-10 02:56:22,292 | INFO | neventsw: 0 [2023-08-10 03:56:44] 2023-08-10 02:56:22,292 | INFO | pid: 30708 [2023-08-10 03:56:44] 2023-08-10 02:56:22,292 | INFO | pgrp: 30708 [2023-08-10 03:56:44] 2023-08-10 02:56:22,292 | INFO | corecount: 4 [2023-08-10 03:56:44] 2023-08-10 02:56:22,292 | INFO | event service: False [2023-08-10 03:56:44] 2023-08-10 02:56:22,292 | INFO | sizes: {0: 2470476, 11: 2470622, 21: 2470650, 32: 2470678, 43: 2470706, 47: 2470794, 53: 2470978, 945: 2492036, 1300: 2501392, 1311: 2501558} [2023-08-10 03:56:44] 2023-08-10 02:56:22,293 | INFO | -------------------------------------------------- [2023-08-10 03:56:44] 2023-08-10 02:56:22,293 | INFO | [2023-08-10 03:56:44] 2023-08-10 02:56:22,293 | INFO | executing command: ls -lF /home/m/BOINC/slots/1 [2023-08-10 03:56:44] 2023-08-10 02:56:22,309 | INFO | queue jobs had 0 job(s) [purged] [2023-08-10 03:56:44] 2023-08-10 02:56:22,309 | INFO | queue payloads had 0 job(s) [purged] [2023-08-10 03:56:44] 2023-08-10 02:56:22,309 | INFO | queue data_in had 0 job(s) [purged] [2023-08-10 03:56:44] 2023-08-10 02:56:22,309 | INFO | queue data_out had 0 job(s) [purged] [2023-08-10 03:56:44] 2023-08-10 02:56:22,310 | INFO | queue current_data_in had 0 job(s) [purged] [2023-08-10 03:56:44] 2023-08-10 02:56:22,310 | INFO | queue validated_jobs had 0 job(s) [purged] [2023-08-10 03:56:44] 2023-08-10 02:56:22,310 | INFO | queue validated_payloads had 0 job(s) [purged] [2023-08-10 03:56:44] 2023-08-10 02:56:22,310 | INFO | queue monitored_payloads had 0 job(s) [purged] [2023-08-10 03:56:44] 2023-08-10 02:56:22,310 | INFO | queue finished_jobs had 0 job(s) [purged] [2023-08-10 03:56:44] 2023-08-10 02:56:22,310 | INFO | queue finished_payloads had 0 job(s) [purged] [2023-08-10 03:56:44] 2023-08-10 02:56:22,310 | INFO | queue finished_data_in had 1 job(s) [purged] [2023-08-10 03:56:44] 2023-08-10 02:56:22,310 | INFO | queue finished_data_out had 0 job(s) [purged] [2023-08-10 03:56:44] 2023-08-10 02:56:22,310 | INFO | queue failed_jobs had 0 job(s) [purged] [2023-08-10 03:56:44] 2023-08-10 02:56:22,310 | INFO | queue failed_payloads had 0 job(s) [purged] [2023-08-10 03:56:44] 2023-08-10 02:56:22,310 | INFO | queue failed_data_in had 0 job(s) [purged] [2023-08-10 03:56:44] 2023-08-10 02:56:22,311 | INFO | queue failed_data_out had 0 job(s) [purged] [2023-08-10 03:56:44] 2023-08-10 02:56:22,311 | INFO | queue completed_jobs had 0 job(s) [purged] [2023-08-10 03:56:44] 2023-08-10 02:56:22,311 | INFO | queue completed_jobids has 1 job(s) [2023-08-10 03:56:44] 2023-08-10 02:56:22,311 | INFO | queue realtimelog_payloads had 0 job(s) [purged] [2023-08-10 03:56:44] 2023-08-10 02:56:22,311 | INFO | queue messages had 0 job(s) [purged] [2023-08-10 03:56:44] 2023-08-10 02:56:22,311 | INFO | job 5927749917 has completed (purged errors) [2023-08-10 03:56:44] 2023-08-10 02:56:22,311 | INFO | overall cleanup function is called [2023-08-10 03:56:44] 2023-08-10 02:56:23,318 | INFO | --- collectZombieJob: --- 10, [30708] [2023-08-10 03:56:44] 2023-08-10 02:56:23,318 | INFO | zombie collector trying to kill pid 30708 [2023-08-10 03:56:44] 2023-08-10 02:56:23,319 | INFO | harmless exception when collecting zombies: [Errno 10] No child processes [2023-08-10 03:56:44] 2023-08-10 02:56:24,324 | INFO | collected zombie processes [2023-08-10 03:56:44] 2023-08-10 02:56:24,324 | INFO | will now attempt to kill all subprocesses of pid=30708 [2023-08-10 03:56:44] 2023-08-10 02:56:24,371 | INFO | process IDs to be killed: [30708] (in reverse order) [2023-08-10 03:56:44] 2023-08-10 02:56:24,404 | WARNING | found no corresponding commands to process id(s) [2023-08-10 03:56:44] 2023-08-10 02:56:24,405 | INFO | Do not look for orphan processes in BOINC jobs [2023-08-10 03:56:44] 2023-08-10 02:56:24,405 | INFO | ready for new job [2023-08-10 03:56:44] 2023-08-10 02:56:24,405 | INFO | pilot has finished with previous job - re-establishing logging [2023-08-10 03:56:44] 2023-08-10 02:56:24,406 | INFO | ************************************* [2023-08-10 03:56:44] 2023-08-10 02:56:24,406 | INFO | *** PanDA Pilot version 3.6.4.7 *** [2023-08-10 03:56:44] 2023-08-10 02:56:24,406 | INFO | ************************************* [2023-08-10 03:56:44] 2023-08-10 02:56:24,406 | INFO | [2023-08-10 03:56:44] 2023-08-10 02:56:24,426 | INFO | architecture information: [2023-08-10 03:56:44] 2023-08-10 02:56:24,427 | INFO | executing command: cat /etc/os-release [2023-08-10 03:56:44] 2023-08-10 02:56:24,441 | INFO | cat /etc/os-release: [2023-08-10 03:56:44] NAME="CentOS Linux" [2023-08-10 03:56:44] VERSION="7 (Core)" [2023-08-10 03:56:44] ID="centos" [2023-08-10 03:56:44] ID_LIKE="rhel fedora" [2023-08-10 03:56:44] VERSION_ID="7" [2023-08-10 03:56:44] PRETTY_NAME="CentOS Linux 7 (Core)" [2023-08-10 03:56:44] ANSI_COLOR="0;31" [2023-08-10 03:56:44] CPE_NAME="cpe:/o:centos:centos:7" [2023-08-10 03:56:44] HOME_URL="https://www.centos.org/" [2023-08-10 03:56:44] BUG_REPORT_URL="https://bugs.centos.org/" [2023-08-10 03:56:44] [2023-08-10 03:56:44] CENTOS_MANTISBT_PROJECT="CentOS-7" [2023-08-10 03:56:44] CENTOS_MANTISBT_PROJECT_VERSION="7" [2023-08-10 03:56:44] REDHAT_SUPPORT_PRODUCT="centos" [2023-08-10 03:56:44] REDHAT_SUPPORT_PRODUCT_VERSION="7" [2023-08-10 03:56:44] [2023-08-10 03:56:44] 2023-08-10 02:56:24,441 | INFO | ************************************* [2023-08-10 03:56:44] 2023-08-10 02:56:24,944 | INFO | executing command: df -mP /home/m/BOINC/slots/1 [2023-08-10 03:56:44] 2023-08-10 02:56:24,961 | INFO | sufficient remaining disk space (423557595136 B) [2023-08-10 03:56:44] 2023-08-10 02:56:24,961 | WARNING | since timefloor is set to 0, pilot was only allowed to run one job [2023-08-10 03:56:44] 2023-08-10 02:56:24,961 | WARNING | setting graceful_stop since proceed_with_getjob() returned False (pilot will end) [2023-08-10 03:56:44] 2023-08-10 02:56:24,961 | WARNING | data:copytool_out:received graceful stop - abort after this iteration [2023-08-10 03:56:44] 2023-08-10 02:56:24,994 | WARNING | job monitor detected an abort_job request (signal=None) [2023-08-10 03:56:44] 2023-08-10 02:56:24,994 | WARNING | job:job_monitor:received graceful stop - abort after this iteration [2023-08-10 03:56:44] 2023-08-10 02:56:24,994 | INFO | will abort loop [2023-08-10 03:56:44] 2023-08-10 02:56:25,130 | INFO | found 0 job(s) in 20 queues [2023-08-10 03:56:44] 2023-08-10 02:56:25,130 | WARNING | pilot monitor received instruction that args.graceful_stop has been set [2023-08-10 03:56:44] 2023-08-10 02:56:25,130 | WARNING | will wait for a maximum of 300 s for threads to finish [2023-08-10 03:56:44] 2023-08-10 02:56:25,966 | INFO | [job] retrieve thread has finished [2023-08-10 03:56:44] 2023-08-10 02:56:25,999 | INFO | [job] job monitor thread has finished [2023-08-10 03:56:44] 2023-08-10 02:56:26,042 | WARNING | data:queue_monitoring:received graceful stop - abort after this iteration [2023-08-10 03:56:44] 2023-08-10 02:56:26,139 | INFO | [payload] control thread has finished [2023-08-10 03:56:44] 2023-08-10 02:56:26,254 | INFO | [data] control thread has finished [2023-08-10 03:56:44] 2023-08-10 02:56:26,286 | INFO | [payload] execute_payloads thread has finished [2023-08-10 03:56:44] 2023-08-10 02:56:26,390 | INFO | [job] validate thread has finished [2023-08-10 03:56:44] 2023-08-10 02:56:26,562 | INFO | [job] create_data_payload thread has finished [2023-08-10 03:56:44] 2023-08-10 02:56:26,684 | INFO | [payload] validate_pre thread has finished [2023-08-10 03:56:44] 2023-08-10 02:56:26,913 | INFO | [payload] failed_post thread has finished [2023-08-10 03:56:44] 2023-08-10 02:56:26,966 | INFO | [data] copytool_out thread has finished [2023-08-10 03:56:44] 2023-08-10 02:56:27,015 | INFO | [data] copytool_in thread has finished [2023-08-10 03:56:44] 2023-08-10 02:56:27,241 | INFO | [job] control thread has finished [2023-08-10 03:56:44] 2023-08-10 02:56:27,301 | WARNING | job:queue_monitor:received graceful stop - abort after this iteration [2023-08-10 03:56:44] 2023-08-10 02:56:27,505 | INFO | [payload] validate_post thread has finished [2023-08-10 03:56:44] 2023-08-10 02:56:28,306 | INFO | [job] queue monitor thread has finished [2023-08-10 03:56:44] 2023-08-10 02:56:30,047 | INFO | [data] queue_monitor thread has finished [2023-08-10 03:56:44] 2023-08-10 02:56:35,776 | INFO | job.realtimelogging is not enabled [2023-08-10 03:56:44] 2023-08-10 02:56:36,782 | INFO | [payload] run_realtimelog thread has finished [2023-08-10 03:56:44] 2023-08-10 02:56:38,812 | INFO | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140564252550976)>', '<ExcThread(monitor, started 140563961583360)>'] [2023-08-10 03:56:44] 2023-08-10 02:56:39,186 | WARNING | job_aborted has been set - aborting pilot monitoring [2023-08-10 03:56:44] 2023-08-10 02:56:39,186 | INFO | [monitor] control thread has ended [2023-08-10 03:56:44] 2023-08-10 02:56:43,834 | INFO | end of generic workflow (traces error code: 0) [2023-08-10 03:56:44] 2023-08-10 02:56:43,834 | INFO | traces error code: 0 [2023-08-10 03:56:44] 2023-08-10 02:56:43,835 | INFO | pilot has finished (exit code=0, shell exit code=0) [2023-08-10 03:56:44] 2023-08-10 02:56:43,886 [wrapper] ==== pilot stdout END ==== [2023-08-10 03:56:44] 2023-08-10 02:56:43,889 [wrapper] ==== wrapper stdout RESUME ==== [2023-08-10 03:56:44] 2023-08-10 02:56:43,892 [wrapper] pilotpid: 23266 [2023-08-10 03:56:44] 2023-08-10 02:56:43,895 [wrapper] Pilot exit status: 0 [2023-08-10 03:56:44] 2023-08-10 02:56:43,907 [wrapper] pandaids: 5927749917 [2023-08-10 03:56:44] 2023-08-10 02:56:43,913 [wrapper] apfmon messages muted [2023-08-10 03:56:44] 2023-08-10 02:56:43,916 [wrapper] Test setup, not cleaning [2023-08-10 03:56:44] 2023-08-10 02:56:43,919 [wrapper] ==== wrapper stdout END ==== [2023-08-10 03:56:44] 2023-08-10 02:56:43,922 [wrapper] ==== wrapper stderr END ==== [2023-08-10 03:56:44] 2023-08-10 02:56:43,929 [wrapper] wrapperexiting ec=0, duration=1539 [2023-08-10 03:56:44] 2023-08-10 02:56:43,932 [wrapper] apfmon messages muted [2023-08-10 03:56:44] *** Error codes and diagnostics *** [2023-08-10 03:56:44] "exeErrorCode": 0, [2023-08-10 03:56:44] "exeErrorDiag": "", [2023-08-10 03:56:44] "pilotErrorCode": 0, [2023-08-10 03:56:44] "pilotErrorDiag": "", [2023-08-10 03:56:44] *** Listing of results directory *** [2023-08-10 03:56:44] total 45628 [2023-08-10 03:56:44] -rw-r--r-- 1 m m 418016 Aug 10 02:30 pilot3.tar.gz [2023-08-10 03:56:44] -rw-r--r-- 1 m m 4388 Aug 10 03:11 queuedata.json [2023-08-10 03:56:44] -rwx------ 1 m m 27277 Aug 10 03:12 runpilot2-wrapper.sh [2023-08-10 03:56:44] -rw-rw-r-- 1 m m 107 Aug 10 03:30 wrapper_26015_x86_64-pc-linux-gnu [2023-08-10 03:56:44] -rwxr-xr-x 1 m m 7986 Aug 10 03:30 run_atlas [2023-08-10 03:56:44] -rw-rw-r-- 1 m m 112 Aug 10 03:30 job.xml [2023-08-10 03:56:44] -rw-r--r-- 2 m m 17596 Aug 10 03:30 start_atlas.sh [2023-08-10 03:56:44] drwxrwx--x 2 m m 4096 Aug 10 03:30 shared [2023-08-10 03:56:44] -rw-r--r-- 2 m m 428868 Aug 10 03:30 input.tar.gz [2023-08-10 03:56:44] -rw-rw-r-- 1 m m 5728 Aug 10 03:30 init_data.xml [2023-08-10 03:56:44] -rw-r--r-- 2 m m 38971704 Aug 10 03:30 EVNT.04972714._000035.pool.root.1 [2023-08-10 03:56:44] -rw-rw-r-- 1 m m 0 Aug 10 03:30 boinc_lockfile [2023-08-10 03:56:44] -rw-rw-r-- 1 m m 2739 Aug 10 03:31 pandaJob.out [2023-08-10 03:56:44] -rw------- 1 m m 424 Aug 10 03:31 setup.sh.local [2023-08-10 03:56:44] -rw------- 1 m m 1018806 Aug 10 03:31 agis_schedconf.cvmfs.json [2023-08-10 03:56:44] -rw------- 1 m m 1379193 Aug 10 03:32 cric_ddmendpoints.json [2023-08-10 03:56:44] drwx------ 4 m m 4096 Aug 10 03:33 pilot3 [2023-08-10 03:56:44] -rw------- 1 m m 1776875 Aug 10 03:50 output.1.81aa4c16-333a-4bf6-bc8e-8b09a75c948a_197.pool.root [2023-08-10 03:56:44] -rw------- 1 m m 1015 Aug 10 03:50 memory_monitor_summary.json [2023-08-10 03:56:44] -rw-rw-r-- 1 m m 533 Aug 10 03:50 boinc_task_state.xml [2023-08-10 03:56:44] -rw------- 1 m m 162766 Aug 10 03:53 81aa4c16-333a-4bf6-bc8e-8b09a75c948a_197.1.job.log.tgz [2023-08-10 03:56:44] -rw------- 1 m m 7385 Aug 10 03:56 heartbeat.json [2023-08-10 03:56:44] -rw-rw-r-- 1 m m 8192 Aug 10 03:56 boinc_mmap_file [2023-08-10 03:56:44] -rw-rw-r-- 1 m m 25 Aug 10 03:56 wrapper_checkpoint.txt [2023-08-10 03:56:44] -rw------- 1 m m 4064 Aug 10 03:56 pilotlog.txt [2023-08-10 03:56:44] -rw------- 1 m m 206462 Aug 10 03:56 81aa4c16-333a-4bf6-bc8e-8b09a75c948a_197.1.job.log [2023-08-10 03:56:44] -rw------- 1 m m 456 Aug 10 03:56 output.list [2023-08-10 03:56:44] -rw-rw-r-- 1 m m 740 Aug 10 03:56 runtime_log [2023-08-10 03:56:44] -rw------- 1 m m 2160640 Aug 10 03:56 result.tar.gz [2023-08-10 03:56:44] -rw-rw-r-- 1 m m 11837 Aug 10 03:56 runtime_log.err [2023-08-10 03:56:44] -rw------- 1 m m 627 Aug 10 03:56 0OENDmFLAo3n7Olcko1bjSoqABFKDmABFKDm7AsVDmu0OKDm5WUU1m.diag [2023-08-10 03:56:44] -rw-rw-r-- 1 m m 22620 Aug 10 03:56 stderr.txt [2023-08-10 03:56:44] HITS file was successfully produced: [2023-08-10 03:56:44] -rw------- 1 m m 1776875 Aug 10 03:50 shared/HITS.pool.root.1 [2023-08-10 03:56:44] *** Contents of shared directory: *** [2023-08-10 03:56:44] total 42348 [2023-08-10 03:56:44] -rw-r--r-- 2 m m 17596 Aug 10 03:30 start_atlas.sh [2023-08-10 03:56:44] -rw-r--r-- 2 m m 428868 Aug 10 03:30 input.tar.gz [2023-08-10 03:56:44] -rw-r--r-- 2 m m 38971704 Aug 10 03:30 ATLAS.root_0 [2023-08-10 03:56:44] -rw------- 1 m m 1776875 Aug 10 03:50 HITS.pool.root.1 [2023-08-10 03:56:44] -rw------- 1 m m 2160640 Aug 10 03:56 result.tar.gz 03:56:45 (19661): run_atlas exited; CPU time 673.266708 03:56:45 (19661): called boinc_finish(0) </stderr_txt> ]]>
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